FR3D analysis of 2HGQ.pdb

List of all pairwise interactions in 2HGQ
List of basepair interactions in 2HGQ
List of stacking interactions in 2HGQ
List of base-phosphate interactions in 2HGQ
List of backbone connectivity relations in 2HGQ
List of backbone conformations found in 2HGQ
List of motifs found in 2HGQ
PDB entry for 2HGQ
Return to list of analyzed structures
FR3D Basepair catalog
FR3D Base-phosphate interactions
FR3D motif library
FR3D home page
BGSU RNA group home page

Circular interaction diagram RNA 3D structure
Click for high resolution pdf

Circular basepair diagram in Nussinov style. Click the diagram for a high-resolution PDF version.

Click here to download the RNA coordinate file.
Resolution: 5.5
Descriptor: Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex. This entry 2HGQ contains 50S ribosomal subunit. The 30S ribosomal subunit can be found in PDB entry 2HGP.
Experimental technique: X-RAY DIFFRACTION
Release Date: 11/7/2006
Author: Jenner, L., Yusupova, G., Rees, B., Moras, D., Yusupov, M.
Biological source: Thermus thermophilus