FR3D analysis of 3D5D.pdb

List of all pairwise interactions in 3D5D
List of basepair interactions in 3D5D
List of stacking interactions in 3D5D
List of base-phosphate interactions in 3D5D
List of backbone connectivity relations in 3D5D
List of backbone conformations found in 3D5D
List of motifs found in 3D5D
PDB entry for 3D5D
Return to list of analyzed structures
FR3D Basepair catalog
FR3D Base-phosphate interactions
FR3D motif library
FR3D home page
BGSU RNA group home page

Circular interaction diagram RNA 3D structure
Click for high resolution pdf

Circular basepair diagram in Nussinov style. Click the diagram for a high-resolution PDF version.

Click here to download the RNA coordinate file.
Resolution: 3.2
Descriptor: Structural basis for translation termination on the 70S ribosome. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes as described in remark 400.
Experimental technique: X-RAY DIFFRACTION
Release Date: 10/7/2008
Author: Laurberg, M., Asahara, H., Korostelev, A., Zhu, J., Trakhanov, S., Noller, H.F.
Biological source: Thermus thermophilus HB27