Instances of tWH-insertion-tHS Motif |
Filename Discrepancy 1 2 3 4 5 6 7 8 9 Chains 1-2 1-3 1-4 1-5 1-6 1-7 1-8 1-9 2-3 2-4 2-5 2-6 2-7 2-8 2-9 3-4 3-5 3-6 3-7 3-8 3-9 4-5 4-6 4-7 4-8 4-9 5-6 5-7 5-8 5-9 6-7 6-8 6-9 7-8 7-9 8-9
LIB00002 1 1s72 0.0000 U 1095 U 1096 A 1097 A 1098 G 1099 C 1257 G 1258 A 1259 A 1261 000000000 s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH ns55 s35 ---- ---- ntHS s55 ---- s35 nbif tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 2 2J01 0.1322 C 998 U 999 A 1000 A 1001 G 1002 C 1153 G 1154 A 1155 G 1157 AAAAAAAAA s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH s55 s35 ---- ---- ntHS s55 ---- s35 nbif tHS ---- ---- cWW ns55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 3 2AW4 0.1355 C 998 U 999 A 1000 A 1001 G 1002 C 1153 G 1154 A 1155 G 1157 BBBBBBBBB s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ncWH ---- ---- s33 tWH s55 s35 ---- ---- ntHS s55 ---- s35 nbif tHS ---- ---- cWW ns55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 4 2AW4 0.1647 C 1577 U 1578 A 1579 A 1580 G 1581 C 1417 G 1418 A 1419 G 1421 BBBBBBBBB s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH s55 s35 ---- ---- ntHS s55 ---- s35 nbif tHS ---- ---- cWW ns55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 5 1s72 0.1838 G 2773 U 2774 A 2775 A 2776 G 2777 C 2797 G 2798 A 2799 A 2801 000000000 s35 ---- ---- ---- ---- ---- ---- cWW ncWH ---- ---- ---- s33 tWH ns55 s35 ---- ---- ntHS s55 ---- s35 nbif tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 6 2J01 0.2032 C 1351 U 1352 A 1353 A 1354 G 1355 C 1376 G 1377 A 1378 G 1380 AAAAAAAAA s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH ns55 s35 ---- ---- s33 s55 ---- s35 nbif tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 7 2AW4 0.2086 C 1351 U 1352 A 1353 A 1354 G 1355 C 1376 G 1377 A 1378 G 1380 BBBBBBBBB s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH ns55 s35 ---- ---- s33 s55 ---- s35 nbif tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 8 2J01 0.2162 C 1577 U 1578 A 1579 A 1580 G 1581 C 1417 G 1418 A 1419 G 1421 AAAAAAAAA s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH ns55 s35 ---- ---- ntHS s55 ---- s35 nbif tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 9 2J01 0.2174 A 2738 U 2739 A 2740 A 2741 C 2742 G 2762 G 2763 A 2764 G 2766 AAAAAAAAA s35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- s33 tWH ns55 s35 ---- ---- ntHS s55 ---- s35 ---- tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 10 1Y69 0.2190 C 1009 U 1010 A 1011 A 1012 G 1013 C 1164 G 1165 A 1166 G 1168 000000000 s35 ---- ---- ---- ---- ---- ---- cWW s35 ---- ---- ---- s33 tWH s55 s35 ---- ---- ntHS s55 ---- ncHS nbif ntHS s55 ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 11 1Y69 0.2909 C 1364 U 1365 A 1366 A 1367 G 1368 C 1389 G 1390 A 1391 G 1393 000000000 s35 ---- ---- ---- ---- ---- ntWH cWW ---- ---- ---- ---- s33 ntWH ns55 s35 ---- ---- s33 s55 ---- s35 nbif tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 12 1s72 0.3678 C 663 U 664 A 665 A 666 C 667 G 679 G 680 A 682 G 683 000000000 ---- ---- ---- ---- ---- ---- nbif cWW ncWH ---- ---- ---- ns33 ntWH ---- s35 ---- ---- ntHS s55 ---- s35 ---- tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
LIB00002 13 2AW4 0.3801 U 606 U 607 A 608 A 609 C 610 G 618 G 619 A 621 G 622 BBBBBBBBB ns35 ---- ---- ---- ---- ---- ntWH cWW ncWH ---- ---- ---- ns33 ntWH ns55 s35 ---- ---- ntHS s55 ---- s35 ---- tHS ---- ---- cWW s55 ---- ---- s35 ---- ---- ---- ---- s35
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Created on 9/14/2008 | Questions or comments? Send us an email! |