Instances of tSH-tSH-tHS Motif

             Filename Discrepancy       1       2       3       4       5       6       7       8       9      10        Chains       1-2   1-3   1-4   1-5   1-6   1-7   1-8   1-9  1-10   2-3   2-4   2-5   2-6   2-7   2-8   2-9  2-10   3-4   3-5   3-6   3-7   3-8   3-9  3-10   4-5   4-6   4-7   4-8   4-9  4-10   5-6   5-7   5-8   5-9  5-10   6-7   6-8   6-9  6-10   7-8   7-9  7-10   8-9  8-10  9-10

LIB00006 1        2J01      0.0000  G 1856  G 1857  G 1858  A 1859  G 1860  C 1882  G 1883  A 1884  A 1885  C 1886       AAAAAAAAAA  s35  ----  ----  ----  ----  ----  ----  ----   cWW   s35  ----  ----  ----  ----   ntSH  tSH   s55   ncSH ----  ----   s33   tSH   ntSH ----   s35   nbif  tHS   s55  ----  ----   cWW   s55  ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 2        2A64      0.2037  C  347  G  348  G  349  A  350  G  351  C  378  G  379  A  380  A  381  G  382       AAAAAAAAAA  s35  ----  ----  ----  ----  ----  ----   nbif  cWW   s35  ----  ----  ----  ----   ntSH  ntSH  s55   ncSH ----  ----   s33   tSH   ntSH ----   s35  ----   ntHS  s55  ----  ----   cWW   ns55 ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 3        2A64      0.2689  C  297  G  298  G  299  A  300  G  301  C  284  G  285  A  286  A  287  G  288       AAAAAAAAAA  s35  ----  ----  ----  ----  ----  ----   nbif  cWW   s35  ----  ----  ----  ----   ntSH  tSH   s55  ----  ----  ----   s33   tSH   ntSH ----   s35   nbif  tHS   s55  ----  ----   cWW   s55  ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 4        1J5E      0.3092  C 1303  G 1304  G 1305  A 1306  U 1307  U 1330  G 1331  A 1332  A 1333  G 1334       AAAAAAAAAA  s35  ----  ----  ----  ----  ----  ----   nbif  cWW   s35  ----  ----  ----  ----   ntSH  tSH   s55   ncSH ----  ----   s33   tSH   ntSH ----   s35   ntHW  tHS   s55  ----  ----   cWw   ncWS ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 5        2AVY      0.3274  C 1303  G 1304  G 1305  A 1306  U 1307  U 1330  G 1331  A 1332  A 1333  G 1334       AAAAAAAAAA  s35  ----  ----  ----  ----  ----  ----   nbif  cWW   s35  ----  ----  ----  ----   ntSH  tSH   s55   ns35 ----  ----   s33   tSH   ntSH ----   s35   ntHW  tHS   s55  ----  ----   cWw   ncWS ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 6        2AW4      0.3708  U  724  G  725  G  726  A  727  G  728  U  703  G  704  A  705  A  706  G  707       BBBBBBBBBB  s35  ----  ----  ----  ----  ----  ----   ntWH  cWW   s35  ----  ----  ----  ----   s33   tSH   ntSH  ncSH ----  ----   s33   tSH   ncSW ----   s35   ntHW  tHS   s55  ----  ----   cWW  ----  ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 7        1S72      0.3800  U  815  G  816  G  817  A  818  A  819  U  794  G  795  A  796  A  797  G  798       0000000000  s35  ----  ----  ----  ----  ----  ----   ntWH  cWW   s35  ----  ----  ----  ----   s33   tSH   ns55  s35  ----  ----   s33   tSH   ntSH ----   s35   ntHW  tHS   s55  ----  ----   cWW   ncWS ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 8        2AW4      0.3840  U 1736  G 1737  G 1738  A 1739  G 1740  U 1720  G 1721  A 1722  G 1723  G 1724       BBBBBBBBBB  s35  ----  ----  ----  ----  ----  ----  ----   cWW   s35  ----  ----  ----  ----   s33   tSH   ns55  ncSH ----  ----   s33   tSH   ntSH ----   s35   ntHW  tHS   s55  ----  ----   cWW  ----  ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 
LIB00006 9        2J01      0.3846  U  724  G  725  G  726  A  727  G  728  U  703  G  704  A  705  A  706  G  707       AAAAAAAAAA  s35  ----  ----  ----  ----  ----  ----   ntWH  cWW   s35  ----  ----  ----  ----   ntSH  tSH   ns55  s35  ----  ----   s33   tSH   ntSH ----   s35   ntHW  tHS   s55  ----  ----   cWW  ----  ----  ----  ----   s35  ----  ----  ----   ncSH ----  ----   s35  ----   s35 

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tSH-tSH-tHS


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