Instances of tWH-tSH-tHS Motif |
Filename Discrepancy 1 2 3 4 5 6 7 8 9 10 Chains 1-2 1-3 1-4 1-5 1-6 1-7 1-8 1-9 1-10 2-3 2-4 2-5 2-6 2-7 2-8 2-9 2-10 3-4 3-5 3-6 3-7 3-8 3-9 3-10 4-5 4-6 4-7 4-8 4-9 4-10 5-6 5-7 5-8 5-9 5-10 6-7 6-8 6-9 6-10 7-8 7-9 7-10 8-9 8-10 9-10
LIB00016 1 1s72 0.0000 C 2672 U 2673 G 2674 A 2675 C 2676 G 2809 G 2810 A 2811 A 2813 G 2817 0000000000 s35 ---- ---- ---- ---- ---- ntWH ---- cWW s35 ---- ---- ---- ---- tWH ntWH s55 s35 ---- ---- s33 s55 tSH ---- s35 ntHS tHS ---- s55 ---- cWW s55 ---- ---- ---- s35 ---- ---- ---- ---- ---- ---- s53 s35 ----
LIB00016 2 2AW4 0.2145 C 2636 U 2637 G 2638 A 2639 G 2640 C 2774 G 2775 A 2776 A 2778 G 2782 BBBBBBBBBB s35 ---- ---- ---- ---- ---- ntWH ---- cWW s35 ---- ---- ---- ---- tWH ntWH s55 s35 ---- ---- s33 ntSH tSH ---- s35 nbif tHS ---- s55 ---- cWW s55 ---- ---- ---- s35 ---- ---- ---- ---- ncSH ---- s53 s35 ----
LIB00016 3 2J01 0.2231 U 2636 U 2637 G 2638 A 2639 G 2640 C 2774 A 2775 A 2776 A 2778 G 2782 AAAAAAAAAA ns35 ---- ---- ---- ---- ---- ntWH ---- cWW s35 ---- ---- ---- ---- tWH ntWH s55 ncSH ---- ---- s33 ---- tSH ---- s35 nbif tHS ---- s55 ---- cWW ns55 ---- ---- ---- s35 ---- ---- ---- ---- ---- ---- s53 s35 ----
LIB00016 4 1Y69 0.2995 U 2615 U 2616 G 2617 A 2618 G 2619 C 2754 A 2755 A 2756 A 2758 G 2762 0000000000 s35 ---- ---- ---- ---- ---- ntWH ---- cWW s35 ---- ---- ---- ---- ntWH ntWH s55 ncSH ---- ---- s33 ---- ntSH ---- s35 nbif ntHS ---- s55 ---- cWW s55 ---- ---- ---- s35 ---- ---- ---- ---- ---- ---- s53 s35 ----
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Created on 9/14/2008 | Questions or comments? Send us an email! |