Instances of cWW-tHW-cSW-cWW_C-loop Motif

             Filename Discrepancy       1       2       3       4       5       6        Chains   1-2   1-3   1-4   1-5   1-6   2-3   2-4   2-5   2-6   3-4   3-5   3-6   4-5   4-6   5-6

LIB00200 1        1s72      0.0000  A 1437  C 1439  G 1425  C 1426  C 1428  U 1429       000000  s35  ----   tHW   nbif  cWW   cWW   nbif  cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 2        2J01      0.1230  A  909  C  912  G  864  C  865  C  867  U  868       AAAAAA  s35  ----   tHW   nbif  cWW   cWW   nbif  ncSW  ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 3        2AW4      0.1579  A  909  C  912  G  864  C  865  C  867  U  868       BBBBBB  s35  ----   tHW  ----   cWW   cWW   nbif  ncSW  ncSW  s35   ncHS ----   ncWH  ntSW  s35 
LIB00200 4        1KOG      0.2448  A   74  G   76  C   96  C   97  C   99  U  100       PPPPPP  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 5        1KOG      0.2457  A   74  G   76  C   96  C   97  C   99  U  100       JJJJJJ  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 6        1KOG      0.2475  A   74  G   76  C   96  C   97  C   99  U  100       NNNNNN  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 7        1KOG      0.2494  A   74  G   76  C   96  C   97  C   99  U  100       LLLLLL  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 8        1KOG      0.2497  A   74  G   76  C   96  C   97  C   99  U  100       MMMMMM  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 9        1KOG      0.2501  A   74  G   76  C   96  C   97  C   99  U  100       IIIIII  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 10       1KOG      0.2502  A   74  G   76  C   96  C   97  C   99  U  100       OOOOOO  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 11       2AW4      0.2555  A 2725  A 2727  U 2680  C 2681  C 2683  U 2684       BBBBBB  s35   ntHW  tHW  ----   cWW   cWW   s55   cSW   ncSW  s35   ncSH ----   ncWH ----   s35 
LIB00200 12       1s72      0.2580  A 1005  C 1008  G  958  C  959  C  962  C  963       000000  s35  ----   tHW   nbif  cWW   cWW   nbif  cSW  ----   s35   ncHS ----   ncWH  tSW   s35 
LIB00200 13       1s72      0.3071  A 2761  G 2763  C 2717  C 2718  C 2720  U 2721       000000  s35   ntHW  tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH  ntSW  s35 
LIB00200 14       1Y69      0.3160  A 2705  G 2707  C 2659  C 2660  C 2662  U 2663       000000  s35  ----   tHW   nbif  cWW   cWW   s55   cSW   ncSW  s35  ----  ----   ncWH ----   s35 
LIB00200 15       2AW4      0.3562  G 1331  G 1333  C 1319  C 1320  A 1322  C 1323       BBBBBB  s35  ----   tHW   ncWW  cWW   cWW   s55   ncSW  ncWS  s35  ----  ----   ncSH  ncWH  s35 
LIB00200 16       1J5E      0.3639  A  389  C  390  G  371  C  372  A  374  U  375       AAAAAA  s35  ----   tHW   ncWW  cWW   cWW   ncSW  cSW  ----   s35   ntSW ----   ncSH ----   s35 
LIB00200 17       2AVY      0.4267  A  389  U  390  A  371  C  372  A  374  U  375       AAAAAA  s35  ----   ntHW  nbif  cWW   cWW  ----   cSW  ----   s35  ----  ----   ncSH  ncWH  s35 
LIB00200 18       1S03      0.4606  G   37  U   38  A   12  A   13  A   14  C   15       BBBBBB  s35   ntHW  ntHW  ncWW  cWW   cWW   ncWW  ncSW  ncSW  s35  ----  ----   cSH   ntSW  s35 
LIB00200 19       1S03      0.4656  G   37  U   38  A   12  A   13  A   14  C   15       AAAAAA  s35   ntHW  ntHW  ncWW  cWW   cWW   ns55  ncSW  ncSW  s35  ----  ----   cSH   ntSW  s35 

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cWW-tHW-cSW-cWW_C-loop


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