Instances of cWW-tHW-cSW-cWW_C-loop Motif |
Filename Discrepancy 1 2 3 4 5 6 Chains 1-2 1-3 1-4 1-5 1-6 2-3 2-4 2-5 2-6 3-4 3-5 3-6 4-5 4-6 5-6
LIB00200 1 1s72 0.0000 A 1437 C 1439 G 1425 C 1426 C 1428 U 1429 000000 s35 ---- tHW nbif cWW cWW nbif cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 2 2J01 0.1230 A 909 C 912 G 864 C 865 C 867 U 868 AAAAAA s35 ---- tHW nbif cWW cWW nbif ncSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 3 2AW4 0.1579 A 909 C 912 G 864 C 865 C 867 U 868 BBBBBB s35 ---- tHW ---- cWW cWW nbif ncSW ncSW s35 ncHS ---- ncWH ntSW s35
LIB00200 4 1KOG 0.2448 A 74 G 76 C 96 C 97 C 99 U 100 PPPPPP s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 5 1KOG 0.2457 A 74 G 76 C 96 C 97 C 99 U 100 JJJJJJ s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 6 1KOG 0.2475 A 74 G 76 C 96 C 97 C 99 U 100 NNNNNN s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 7 1KOG 0.2494 A 74 G 76 C 96 C 97 C 99 U 100 LLLLLL s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 8 1KOG 0.2497 A 74 G 76 C 96 C 97 C 99 U 100 MMMMMM s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 9 1KOG 0.2501 A 74 G 76 C 96 C 97 C 99 U 100 IIIIII s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 10 1KOG 0.2502 A 74 G 76 C 96 C 97 C 99 U 100 OOOOOO s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 11 2AW4 0.2555 A 2725 A 2727 U 2680 C 2681 C 2683 U 2684 BBBBBB s35 ntHW tHW ---- cWW cWW s55 cSW ncSW s35 ncSH ---- ncWH ---- s35
LIB00200 12 1s72 0.2580 A 1005 C 1008 G 958 C 959 C 962 C 963 000000 s35 ---- tHW nbif cWW cWW nbif cSW ---- s35 ncHS ---- ncWH tSW s35
LIB00200 13 1s72 0.3071 A 2761 G 2763 C 2717 C 2718 C 2720 U 2721 000000 s35 ntHW tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ntSW s35
LIB00200 14 1Y69 0.3160 A 2705 G 2707 C 2659 C 2660 C 2662 U 2663 000000 s35 ---- tHW nbif cWW cWW s55 cSW ncSW s35 ---- ---- ncWH ---- s35
LIB00200 15 2AW4 0.3562 G 1331 G 1333 C 1319 C 1320 A 1322 C 1323 BBBBBB s35 ---- tHW ncWW cWW cWW s55 ncSW ncWS s35 ---- ---- ncSH ncWH s35
LIB00200 16 1J5E 0.3639 A 389 C 390 G 371 C 372 A 374 U 375 AAAAAA s35 ---- tHW ncWW cWW cWW ncSW cSW ---- s35 ntSW ---- ncSH ---- s35
LIB00200 17 2AVY 0.4267 A 389 U 390 A 371 C 372 A 374 U 375 AAAAAA s35 ---- ntHW nbif cWW cWW ---- cSW ---- s35 ---- ---- ncSH ncWH s35
LIB00200 18 1S03 0.4606 G 37 U 38 A 12 A 13 A 14 C 15 BBBBBB s35 ntHW ntHW ncWW cWW cWW ncWW ncSW ncSW s35 ---- ---- cSH ntSW s35
LIB00200 19 1S03 0.4656 G 37 U 38 A 12 A 13 A 14 C 15 AAAAAA s35 ntHW ntHW ncWW cWW cWW ns55 ncSW ncSW s35 ---- ---- cSH ntSW s35
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Created on 9/14/2008 | Questions or comments? Send us an email! |