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zMutualDistance

PURPOSE

zMutalDistance(A,L) finds the mutual distances between the rows of A and

SYNOPSIS

function [D] = zMutualDistance(A,L)

DESCRIPTION

 zMutalDistance(A,L) finds the mutual distances between the rows of A and
 returns a sparse matrix D in which all entries are less than L

CROSS-REFERENCE INFORMATION

This function calls:

zDistance zDistance(A,B) finds the Euclidean distances between the rows of A and of B

This function is called by:

xConstructQuery xConstructQuery(Query,File) fills in details of Query from File
xDisplayCandidates xDisplayCandidates(File,Search,Level) displays candidates
xFR3DSearch xFR3DSearch conducts the search given in xSpecifyQuery in the PDB files
zBackboneContinuity
zGetNTData zGetNTData(Filenames,ReadCode,Verbose) reads data files, depending on ReadCode
zPhosphateInteractions zPhosphateInteractions checks all nearby pairs of bases for base-phosphate

SOURCE CODE

0001 % zMutalDistance(A,L) finds the mutual distances between the rows of A and
0002 % returns a sparse matrix D in which all entries are less than L
0003 
0004 function [D] = zMutualDistance(A,L)
0005 
0006 % D = squareform(pdist(A));                  % pdist is in stats toolbox
0007 
0008 D = zDistance(A);
0009 
0010 D = sparse(D .* (D < L));