Character Definition | A,C,G,U,* // Identity and order of characters in matrices
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.000000000,0.000000000,0.000000000,0.000000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.000000000,0.000000000,0.000000000,0.000000000,0.000000000] | Left Index [1] | Right Index [8] // Initial node
HairpinNode  | Num Bases [8] | Left Index [1] | Right Index [8] | Norm Constant [0.112416937282600] // Hairpin node G28:C39
Interaction  | Interacting Bases [2,6] | Pair Probability [[0.009034335,0.017544761,0.009910087,0.196321162,0.000000000],[0.022043953,0.009831675,0.196981684,0.011044900,0.000000000],[0.009929415,0.194460696,0.002044250,0.023047545,0.000000000],[0.224032836,0.010374563,0.053294552,0.010103588,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin Interaction U30 - A35 cWW 
Interaction  | Interacting Bases [5,6] | Pair Probability [[0.008335090,0.008456775,0.008103673,0.008758894,0.000000000],[0.015122597,0.014345643,0.003255280,0.015476731,0.000000000],[0.010786459,0.002334730,0.009842452,0.008380535,0.000000000],[0.253080851,0.210591316,0.193742704,0.229386269,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin Interaction U33 - A35 cWS 
Interaction  | Interacting Bases [4,7] | Pair Probability [[0.009536579,0.017101376,0.010963471,0.198789353,0.000000000],[0.020276398,0.009712729,0.228583296,0.013790641,0.000000000],[0.011086594,0.203072729,0.002089755,0.023466206,0.000000000],[0.201366458,0.013287017,0.026771249,0.010106148,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin Interaction C32 - G36 cWW 
Interaction  | Interacting Bases [1,8] | Pair Probability [[0.004794140,0.049922383,0.005459246,0.099156600,0.000000000],[0.008421037,0.023505677,0.099996800,0.006542775,0.000000000],[0.005398618,0.534124901,0.001029034,0.013182663,0.000000000],[0.097887586,0.033953843,0.011555197,0.005069499,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin Interaction G28 - C39 cWW 
Interaction  | Interacting Bases [3,8] | Pair Probability [[0.099820651,0.562213751,0.099700937,0.097788684,0.000000000],[0.009694335,0.043025138,0.001085212,0.008387967,0.000000000],[0.009062072,0.005426059,0.026872012,0.004801924,0.000000000],[0.003930815,0.020984238,0.003343284,0.003862922,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin Interaction A31 - C39 cWS 
Insertion    | Location [1] | Length Distribution [0.023781213,0.951248514,0.023781213,0.001189061] | Letter Distribution [0.125000000,0.125000000,0.125000000,0.625000000,0.000000000]// Insertion in Hairpin after nucleotide 1, position 1
Insertion    | Location [5] | Length Distribution [0.023781213,0.951248514,0.023781213,0.001189061] | Letter Distribution [0.125000000,0.125000000,0.125000000,0.625000000,0.000000000]// Insertion in Hairpin after nucleotide 5, position 5
Insertion    | Location [7] | Length Distribution [0.000000000,0.023781213,0.951248514,0.023781213,0.001189061] | Letter Distribution [0.083333333,0.083333333,0.083333333,0.750000000,0.000000000]// Insertion in Hairpin after nucleotide 7, position 7
