Character Definition | A,C,G,U,* // Identity and order of characters in matrices
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.000000000,0.000000000,0.000000000,0.000000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.000000000,0.000000000,0.000000000,0.000000000,0.000000000] | Left Index [1] | Right Index [5] // Initial node
BasepairNode | Deletion Probability [0.0000083361642801] | Pair Probability [[0.008581857,0.016398307,0.009591246,0.183193464,0.000000000],[0.019490383,0.009056960,0.213825451,0.011213075,0.000000000],[0.009624836,0.193146236,0.001912411,0.021832549,0.000000000],[0.242725585,0.010746714,0.039273889,0.009387036,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.997990020,0.001999980,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.796024845,0.202732919,0.001192547,0.000049689] | Right Letter Distribution [0.125000000,0.125000000,0.125000000,0.625000000,0.000000000] | Left Index [1] | Right Index [5] // Basepair U3 - A8 cWW 
BasepairNode | Deletion Probability [0.0000000420189757] | Pair Probability [[0.271662348,0.014620519,0.019769390,0.007102071,0.000000000],[0.182985740,0.011924733,0.001989351,0.007491791,0.000000000],[0.193376820,0.001989351,0.025337927,0.005928710,0.000000000],[0.186917762,0.052456767,0.009462889,0.006983833,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.796024845,0.202732919,0.001192547,0.000049689] | Left Letter Distribution [0.375000000,0.125000000,0.125000000,0.375000000,0.000000000] | Right Length Distribution [0.004949270,0.989853997,0.004949270,0.000247463] | Right Letter Distribution [0.208333333,0.041666667,0.041666667,0.708333333,0.000000000] | Left Index [2] | Right Index [4] // Basepair A4 - A7 cSW 
HairpinNode  | Num Bases [1] | Left Index [3] | Right Index [3] | Norm Constant [1.000000000000000] // Hairpin node G5:G5
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.395833333,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.006944444,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.590277778,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.006944444,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position G5
