Character Definition | A,C,G,U,* // Identity and order of characters in matrices
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.000000000,0.000000000,0.000000000,0.000000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.000000000,0.000000000,0.000000000,0.000000000,0.000000000] | Left Index [1] | Right Index [5] // Initial node
BasepairNode | Deletion Probability [0.0000239574126029] | Pair Probability [[0.009387651,0.019530919,0.010554546,0.207129074,0.000000000],[0.017651286,0.009411146,0.208023701,0.012435536,0.000000000],[0.010519639,0.219702921,0.002037417,0.031926571,0.000000000],[0.194898105,0.012723078,0.023711475,0.010356935,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.995990040,0.003999960,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.995990040,0.003999960,0.000010000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [5] // Basepair G759 - C764 cWW 
BasepairNode | Deletion Probability [0.0000000286873767] | Pair Probability [[0.013755485,0.252292367,0.012281328,0.074771788,0.000000000],[0.015203076,0.016392676,0.071656399,0.013482061,0.000000000],[0.012024814,0.018677519,0.003791263,0.048434101,0.000000000],[0.018738100,0.014601062,0.015540908,0.398357054,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.496627836,0.496627836,0.006437768,0.000306560] | Left Letter Distribution [0.125000000,0.375000000,0.375000000,0.125000000,0.000000000] | Right Length Distribution [0.738007380,0.009225092,0.003536285,0.246002460,0.003075031,0.000153752] | Right Letter Distribution [0.100000000,0.300000000,0.300000000,0.300000000,0.000000000] | Left Index [2] | Right Index [4] // Basepair U760 - U763 cWW 
HairpinNode  | Num Bases [1] | Left Index [3] | Right Index [3] | Norm Constant [1.000000000000000] // Hairpin node U762:U762
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.250000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.083333333,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.250000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.416666667,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position U762
