Comparison of motif group and JAR3D alignment of sequences each motif group

IL_00225.13 had 0 misalignments
IL_00555.1 had 0 misalignments
IL_00881.1 had 0 misalignments
IL_00981.1 had 0 misalignments
IL_01038.1 had 0 misalignments
IL_01176.1 had 0 misalignments
IL_01488.3 had 0 misalignments
IL_01994.1 had 0 misalignments
IL_02203.1 had 0 misalignments
IL_02349.4 had 0 misalignments
IL_02555.1 had 0 misalignments
IL_03109.3 had 0 misalignments
IL_03350.1 had 0 misalignments
IL_04021.2 had 0 misalignments
IL_04073.1 had 0 misalignments
IL_04307.1 had 0 misalignments
IL_04332.3 had 0 misalignments
IL_04346.10 had 0 misalignments
IL_04600.1 had 0 misalignments
IL_04638.3 had 0 misalignments
IL_04650.2 had 0 misalignments
IL_04736.1 had 0 misalignments
IL_04785.1 had 0 misalignments
IL_05192.4 had 0 misalignments
IL_05472.1 had 0 misalignments
IL_06029.1 had 0 misalignments
IL_06136.2 had 0 misalignments
IL_06300.1 had 0 misalignments
IL_06549.2 had 0 misalignments
IL_06691.1 had 0 misalignments
IL_07039.3 had 0 misalignments
IL_07171.1 had 0 misalignments
IL_07173.1 had 0 misalignments
IL_07469.2 had 0 misalignments
IL_07785.1 had 0 misalignments
IL_08770.1 had 0 misalignments
IL_09044.1 had 0 misalignments
IL_09129.2 had 0 misalignments
IL_09570.1 had 0 misalignments
IL_09705.15 had 0 misalignments
IL_09908.1 had 0 misalignments
IL_09990.4 had 0 misalignments
IL_10167.6 had 0 misalignments
IL_10389.1 had 0 misalignments
IL_10484.1 had 0 misalignments
IL_10569.1 had 0 misalignments
IL_10796.1 had 0 misalignments
IL_11344.2 had 0 misalignments
IL_11399.2 had 0 misalignments
IL_11415.1 had 0 misalignments
IL_12566.4 had 0 misalignments
IL_12697.1 had 0 misalignments
IL_12745.1 had 0 misalignments
IL_13358.1 had 0 misalignments
IL_13394.1 had 0 misalignments
IL_13404.2 had 0 misalignments
IL_13874.1 had 0 misalignments
IL_14177.2 had 0 misalignments
IL_14368.1 had 0 misalignments
IL_14688.1 had 0 misalignments
IL_15052.4 had 0 misalignments
IL_15107.1 had 0 misalignments
IL_15218.1 had 0 misalignments
IL_15698.3 had 0 misalignments
IL_15991.1 had 0 misalignments
IL_16218.2 had 0 misalignments
IL_16386.4 had 0 misalignments
IL_16458.4 had 0 misalignments
IL_16665.1 had 0 misalignments
IL_17069.5 had 0 misalignments
IL_17136.7 had 0 misalignments
IL_17765.1 had 0 misalignments
IL_17948.2 had 0 misalignments
IL_17973.1 had 0 misalignments
IL_18354.1 had 0 misalignments
IL_18472.4 had 0 misalignments
IL_18487.1 had 0 misalignments
IL_19048.1 had 0 misalignments
IL_19102.1 had 0 misalignments
IL_19516.1 had 0 misalignments
IL_19668.1 had 0 misalignments
IL_19852.1 had 0 misalignments
IL_19897.3 had 0 misalignments
IL_20031.1 had 0 misalignments
IL_20047.1 had 0 misalignments
IL_20245.1 had 0 misalignments
IL_20463.1 had 0 misalignments
IL_21001.1 had 0 misalignments
IL_21173.1 had 0 misalignments
IL_21200.1 had 0 misalignments
IL_21630.1 had 0 misalignments
IL_21667.1 had 0 misalignments
IL_22373.1 had 0 misalignments
IL_22551.4 had 0 misalignments
IL_22564.1 had 0 misalignments
IL_22829.2 had 0 misalignments
IL_22854.4 had 0 misalignments
IL_23038.1 had 0 misalignments
IL_23774.1 had 0 misalignments
IL_24134.1 had 0 misalignments
IL_24254.1 had 0 misalignments
IL_24499.1 had 0 misalignments
IL_25186.4 had 0 misalignments
IL_25412.1 had 0 misalignments
IL_25463.1 had 0 misalignments
IL_25573.1 had 0 misalignments
IL_25872.4 had 0 misalignments
IL_26222.2 had 0 misalignments
IL_26307.2 had 0 misalignments
IL_26598.1 had 0 misalignments
IL_26685.1 had 0 misalignments
IL_26728.3 had 0 misalignments
IL_26793.1 had 0 misalignments
IL_27393.10 had 0 misalignments
IL_28026.3 had 0 misalignments
IL_28037.2 had 0 misalignments
IL_28304.1 had 0 misalignments
IL_28564.1 had 0 misalignments
IL_28788.1 had 0 misalignments
IL_29198.2 had 0 misalignments
IL_29223.1 had 0 misalignments
IL_29346.2 had 0 misalignments
IL_29357.1 had 0 misalignments
IL_29471.1 had 0 misalignments
IL_29826.1 had 0 misalignments
IL_30441.1 had 0 misalignments
IL_30730.1 had 0 misalignments
IL_31084.1 had 0 misalignments
IL_31462.6 had 0 misalignments
IL_31504.1 had 0 misalignments
IL_31531.3 had 0 misalignments
IL_31558.1 had 0 misalignments
IL_31561.1 had 0 misalignments
IL_31737.3 had 0 misalignments
IL_31915.1 had 0 misalignments
IL_32016.1 had 0 misalignments
IL_32056.1 had 0 misalignments
IL_33141.1 had 0 misalignments
IL_33323.1 had 0 misalignments
IL_33623.1 had 0 misalignments
IL_33711.1 had 0 misalignments
IL_33761.2 had 0 misalignments
IL_33886.1 had 0 misalignments
IL_34470.3 had 0 misalignments
IL_34737.1 had 0 misalignments
IL_34739.3 had 0 misalignments
IL_34822.1 had 0 misalignments
IL_36516.3 had 0 misalignments
IL_36729.1 had 0 misalignments
IL_37015.1 had 0 misalignments
IL_37603.1 had 0 misalignments
IL_37752.1 had 0 misalignments
IL_38186.6 had 0 misalignments
IL_38394.1 had 0 misalignments
IL_38507.2 had 0 misalignments
IL_38634.5 had 0 misalignments
IL_38862.4 had 0 misalignments
IL_38969.1 had 0 misalignments
IL_41203.4 had 0 misalignments
IL_41344.1 had 0 misalignments
IL_41756.4 had 0 misalignments
IL_41853.1 had 0 misalignments
IL_42032.1 had 0 misalignments
IL_42218.2 had 0 misalignments
IL_42231.1 had 0 misalignments
IL_42314.1 had 0 misalignments
IL_42626.2 had 0 misalignments
IL_42771.1 had 0 misalignments
IL_42778.1 had 0 misalignments
IL_42997.3 had 0 misalignments
IL_43140.1 had 0 misalignments
IL_43467.1 had 0 misalignments
IL_43547.1 had 0 misalignments
IL_43622.1 had 0 misalignments
IL_43644.1 had 0 misalignments
IL_43858.1 had 0 misalignments
IL_44325.1 had 0 misalignments
IL_44438.1 had 0 misalignments
IL_44465.1 had 0 misalignments
IL_44624.1 had 0 misalignments
IL_44874.1 had 0 misalignments
IL_45444.1 had 0 misalignments
IL_45896.1 had 0 misalignments
IL_46086.1 had 0 misalignments
IL_46112.1 had 0 misalignments
IL_46174.3 had 0 misalignments
IL_46387.1 had 0 misalignments
IL_47074.2 had 0 misalignments
IL_47078.3 had 0 misalignments
IL_47087.1 had 0 misalignments
IL_47108.1 had 0 misalignments
IL_47346.2 had 0 misalignments
IL_47972.1 had 0 misalignments
IL_48076.6 had 0 misalignments
IL_48444.6 had 1 misalignment
IL_49061.1 had 0 misalignments
IL_49612.1 had 0 misalignments
IL_49714.1 had 0 misalignments
IL_49751.4 had 0 misalignments
IL_49767.8 had 0 misalignments
IL_49867.1 had 0 misalignments
IL_49971.1 had 0 misalignments
IL_50694.7 had 0 misalignments
IL_50715.3 had 0 misalignments
IL_50730.2 had 0 misalignments
IL_51191.1 had 0 misalignments
IL_51265.3 had 0 misalignments
IL_51387.2 had 2 misalignments
IL_51454.3 had 0 misalignments
IL_51479.1 had 0 misalignments
IL_52743.1 had 0 misalignments
IL_53448.1 had 0 misalignments
IL_53581.1 had 0 misalignments
IL_53596.1 had 0 misalignments
IL_53787.1 had 0 misalignments
IL_54041.2 had 0 misalignments
IL_54050.1 had 0 misalignments
IL_54177.4 had 0 misalignments
IL_54737.1 had 0 misalignments
IL_54896.1 had 0 misalignments
IL_55516.2 had 0 misalignments
IL_55917.1 had 0 misalignments
IL_55953.3 had 0 misalignments
IL_56317.1 had 0 misalignments
IL_56455.6 had 0 misalignments
IL_56987.1 had 0 misalignments
IL_57188.5 had 0 misalignments
IL_57741.1 had 0 misalignments
IL_57744.1 had 0 misalignments
IL_57881.1 had 0 misalignments
IL_58103.11 had 0 misalignments
IL_58112.2 had 0 misalignments
IL_58126.1 had 0 misalignments
IL_58350.1 had 0 misalignments
IL_58960.1 had 0 misalignments
IL_59049.1 had 0 misalignments
IL_59258.1 had 0 misalignments
IL_59302.1 had 0 misalignments
IL_59724.1 had 0 misalignments
IL_59877.1 had 0 misalignments
IL_60448.1 had 0 misalignments
IL_60657.1 had 0 misalignments
IL_60797.1 had 0 misalignments
IL_61242.1 had 0 misalignments
IL_61249.1 had 0 misalignments
IL_61258.15 had 0 misalignments
IL_61286.1 had 0 misalignments
IL_61299.4 had 0 misalignments
IL_61341.1 had 0 misalignments
IL_61438.4 had 0 misalignments
IL_61440.1 had 0 misalignments
IL_61476.2 had 0 misalignments
IL_62012.1 had 0 misalignments
IL_62654.1 had 0 misalignments
IL_63519.1 had 0 misalignments
IL_63596.11 had 0 misalignments
IL_63775.1 had 0 misalignments
IL_64048.1 had 0 misalignments
IL_64231.5 had 0 misalignments
IL_64403.1 had 0 misalignments
IL_64842.1 had 0 misalignments
IL_64858.3 had 0 misalignments
IL_64900.1 had 0 misalignments
IL_65594.1 had 0 misalignments
IL_65653.1 had 0 misalignments
IL_65718.4 had 0 misalignments
IL_65851.3 had 0 misalignments
IL_66635.5 had 2 misalignments
IL_66663.1 had 0 misalignments
IL_66798.2 had 0 misalignments
IL_66997.2 had 0 misalignments
IL_67095.2 had 0 misalignments
IL_67623.1 had 0 misalignments
IL_67767.4 had 0 misalignments
IL_67780.1 had 0 misalignments
IL_68140.4 had 0 misalignments
IL_68243.1 had 0 misalignments
IL_68405.1 had 0 misalignments
IL_68574.4 had 0 misalignments
IL_68909.1 had 0 misalignments
IL_69000.1 had 0 misalignments
IL_69145.3 had 0 misalignments
IL_69229.3 had 1 misalignment
IL_69271.3 had 0 misalignments
IL_69440.3 had 0 misalignments
IL_69543.3 had 0 misalignments
IL_69986.1 had 0 misalignments
IL_70096.1 had 0 misalignments
IL_70335.1 had 0 misalignments
IL_70376.1 had 0 misalignments
IL_70411.2 had 0 misalignments
IL_70627.3 had 0 misalignments
IL_70670.1 had 0 misalignments
IL_70801.1 had 0 misalignments
IL_70923.9 had 0 misalignments
IL_71294.3 had 0 misalignments
IL_71598.1 had 0 misalignments
IL_73002.1 had 0 misalignments
IL_73355.1 had 0 misalignments
IL_73452.2 had 0 misalignments
IL_73700.1 had 0 misalignments
IL_73759.1 had 0 misalignments
IL_73789.1 had 0 misalignments
IL_74051.1 had 0 misalignments
IL_74184.1 had 0 misalignments
IL_74367.1 had 0 misalignments
IL_74746.1 had 0 misalignments
IL_74957.1 had 0 misalignments
IL_75283.2 had 0 misalignments
IL_75294.1 had 0 misalignments
IL_76308.6 had 0 misalignments
IL_76319.5 had 0 misalignments
IL_76460.1 had 0 misalignments
IL_76709.2 had 0 misalignments
IL_76758.2 had 0 misalignments
IL_77045.1 had 0 misalignments
IL_77278.1 had 0 misalignments
IL_77658.1 had 0 misalignments
IL_77691.5 had 0 misalignments
IL_77870.1 had 0 misalignments
IL_78349.3 had 0 misalignments
IL_78472.1 had 0 misalignments
IL_78800.1 had 0 misalignments
IL_79846.1 had 0 misalignments
IL_79895.1 had 0 misalignments
IL_80209.1 had 0 misalignments
IL_80231.1 had 0 misalignments
IL_80298.1 had 0 misalignments
IL_80398.1 had 0 misalignments
IL_80412.1 had 0 misalignments
IL_80604.6 had 0 misalignments
IL_80926.1 had 0 misalignments
IL_81392.1 had 0 misalignments
IL_81516.2 had 0 misalignments
IL_81522.2 had 0 misalignments
IL_81731.1 had 0 misalignments
IL_81831.1 had 0 misalignments
IL_82107.4 had 0 misalignments
IL_82292.1 had 0 misalignments
IL_82426.6 had 0 misalignments
IL_82683.2 had 0 misalignments
IL_82706.1 had 0 misalignments
IL_82741.2 had 0 misalignments
IL_82968.1 had 0 misalignments
IL_83149.1 had 0 misalignments
IL_83150.2 had 0 misalignments
IL_83389.2 had 0 misalignments
IL_84251.1 had 0 misalignments
IL_84409.1 had 0 misalignments
IL_84476.1 had 0 misalignments
IL_84665.1 had 0 misalignments
IL_84694.2 had 0 misalignments
IL_85033.2 had 0 misalignments
IL_85222.1 had 0 misalignments
IL_85498.1 had 0 misalignments
IL_85536.2 had 0 misalignments
IL_85599.2 had 0 misalignments
IL_85630.1 had 0 misalignments
IL_85652.1 had 0 misalignments
IL_85879.1 had 0 misalignments
IL_86012.1 had 0 misalignments
IL_86136.1 had 0 misalignments
IL_87211.1 had 0 misalignments
IL_87284.1 had 0 misalignments
IL_87290.1 had 0 misalignments
IL_87907.2 had 0 misalignments
IL_88017.1 had 0 misalignments
IL_88072.1 had 0 misalignments
IL_88082.1 had 0 misalignments
IL_88116.2 had 0 misalignments
IL_88269.4 had 0 misalignments
IL_88974.1 had 0 misalignments
IL_89021.2 had 0 misalignments
IL_89047.1 had 0 misalignments
IL_89099.1 had 0 misalignments
IL_89312.1 had 0 misalignments
IL_89505.4 had 0 misalignments
IL_89984.3 had 0 misalignments
IL_90346.1 had 0 misalignments
IL_90351.1 had 0 misalignments
IL_90729.1 had 0 misalignments
IL_91592.1 had 0 misalignments
IL_91636.1 had 0 misalignments
IL_91698.1 had 0 misalignments
IL_91920.1 had 0 misalignments
IL_92446.2 had 0 misalignments
IL_92634.2 had 0 misalignments
IL_93889.1 had 0 misalignments
IL_94351.1 had 0 misalignments
IL_94684.1 had 0 misalignments
IL_94910.1 had 0 misalignments
IL_94967.1 had 0 misalignments
IL_95570.1 had 0 misalignments
IL_95583.2 had 0 misalignments
IL_95727.1 had 0 misalignments
IL_95811.1 had 0 misalignments
IL_96236.1 had 0 misalignments
IL_96303.1 had 0 misalignments
IL_96332.5 had 0 misalignments
IL_96371.1 had 0 misalignments
IL_96759.1 had 0 misalignments
IL_96788.1 had 0 misalignments
IL_97273.1 had 0 misalignments
IL_97631.1 had 0 misalignments
IL_97697.1 had 2 misalignments
IL_98347.1 had 0 misalignments
IL_99358.1 had 0 misalignments
IL_99380.1 had 0 misalignments
IL_99498.1 had 0 misalignments
IL_99646.2 had 0 misalignments
IL_99692.2 had 0 misalignments