Motifs in release J3\3.48

There are 88 motif groups, of which 78 are structured
RNA 3D hub site for this release
J3_00584.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-F-F-tWH-cWW-tSS-F-tHS-F-cWW
J3_02067.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tSS-F-F-F-cWW-cWW-F-F
J3_04858.1 2 instances 12 conserved NTs Model Interactions Alignment cWW-F-cWW-F-F-F-F-F-cWW
J3_05170.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-F-tSH-tWH-cSH-cWW-tWS-F-cWW
J3_06335.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-F-F-tSH-cSS-tWH-F-cWW-cWW-F
J3_06579.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-F-tHS-F-tHS-F-cWW-cWW
J3_08394.2 3 instances 20 conserved NTs Model Interactions Alignment cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
J3_08465.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-cWW-F-F-tHW-F-F-tHH-cWW-cWW
J3_11279.1 2 instances 19 conserved NTs Model Interactions Alignment cWW-tSH-tHW-cSH-tHH-cSS-tWW-F-F-cWW-cWW-F
J3_11934.2 4 instances 13 conserved NTs Model Interactions Alignment cWW-F-cWW-F-F-tWW-F-cWW-F
J3_13944.1 2 instances 13 conserved NTs Model Interactions Alignment cWW-F-F-tSS-F-F-cWW-cWW
J3_15893.1 5 instances 14 conserved NTs Model Interactions Alignment cWW-tSH-cSS-tHS-F-cWW-cWW-cWW
J3_18709.1 1 instances 12 conserved NTs Model Interactions Alignment cWW-F-tWW-cSH-cWW-cWW-F
J3_19256.1 2 instances 12 conserved NTs Model Interactions Alignment cWW-F-F-F-cWW-F-F-cWW-F
J3_19286.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-F-F-tSH-F-cWW-F-F-F-cWW-F
J3_19431.1 1 instances 9 conserved NTs Model Interactions Alignment cWW-F-cWW-tSS-F-cWW
J3_20650.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-F-F-F-F-cSS-cWW-cWW-F
J3_22198.1 1 instances 12 conserved NTs Model Interactions Alignment cWW-cSH-F-cWW-cSS-cWW-F
J3_25217.1 1 instances 9 conserved NTs Model Interactions Alignment cWW-F-cWW-F-cWW-F-F
J3_25670.1 1 instances 11 conserved NTs Model Interactions Alignment cWW-F-F-F-cWW-F-F-cWW
J3_28621.2 6 instances 13 conserved NTs Model Interactions Alignment cWW-tWW-tHS-tSH-cWW-tSS-F-cSS-cWW
J3_30104.1 1 instances 8 conserved NTs Model Interactions Alignment cWW-F-F-cWW-cWW
J3_32030.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-tWH-F-F-cWW-tHS-F-F-cWW-F
J3_32601.2 4 instances 12 conserved NTs Model Interactions Alignment cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
J3_32852.2 4 instances 12 conserved NTs Model Interactions Alignment cWW-tSH-tHW-F-F-cWW-cWW-F
J3_32857.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-F-F-F-F-F-cWW-F-cWW-F-F-F-F
J3_33851.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-tSH-F-F-tHS-cWW-cWW-F-F
J3_35321.1 1 instances 12 conserved NTs Model Interactions Alignment cWW-cSS-F-F-F-F-cWW-F-cWW
J3_36387.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-F-F-F-tWW-tHW-tHW-cWW-F-F-cWW
J3_36499.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tSS-tSH-tHW-tHS-cWW-cWW-F
J3_37047.2 4 instances 15 conserved NTs Model Interactions Alignment cWW-cSS-cSH-F-tWH-F-cWW-cSH-F-cWW-F
J3_37410.1 1 instances 18 conserved NTs Model Interactions Alignment cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
J3_38151.1 1 instances 10 conserved NTs Model Interactions Alignment cWW-F-F-F-cWW-cWW-F
J3_38446.1 1 instances 17 conserved NTs Model Interactions Alignment cWW-F-cWW-F-F-F-F-F-F-cWS-F-cWW-F
J3_38616.1 1 instances 17 conserved NTs Model Interactions Alignment cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
J3_39238.2 6 instances 11 conserved NTs Model Interactions Alignment cWW-tWH-cWW-tSW-F-F-cWW
J3_41097.1 2 instances 9 conserved NTs Model Interactions Alignment cWW-cWW-F-cWW-cWW
J3_42157.1 3 instances 12 conserved NTs Model Interactions Alignment cWW-tSH-tWW-tHW-F-F-cWW-cWW
J3_44724.2 5 instances 12 conserved NTs Model Interactions Alignment cWW-tSH-F-cWW-tHS-cWW-F
J3_45941.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-cWS-cSH-tWH-F-F-F-F-cWW-cWW-F
J3_47248.1 1 instances 17 conserved NTs Model Interactions Alignment cWW-F-F-F-F-F-tHH-F-cWW-cWW-F-F-F
J3_47376.1 1 instances 10 conserved NTs Model Interactions Alignment cWW-F-F-cWS-cWW-F-cWW
J3_47707.1 1 instances 20 conserved NTs Model Interactions Alignment cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
J3_48314.1 1 instances 11 conserved NTs Model Interactions Alignment cWW-cWW-F-cWW-F-cWW-F
J3_51910.1 1 instances 12 conserved NTs Model Interactions Alignment cWW-F-cWW-tWS-F-F-cWW-cWW
J3_52655.1 3 instances 11 conserved NTs Model Interactions Alignment cWW-tSH-cWW-F-cWW-cWW
J3_52842.1 1 instances 11 conserved NTs Model Interactions Alignment cWW-tHS-F-F-F-cWW-cWW
J3_52917.1 1 instances 12 conserved NTs Model Interactions Alignment cWW-tWW-cHW-tSH-cWW-tSS-F-cSS-cWW
J3_56052.2 4 instances 8 conserved NTs Model Interactions Alignment cWW-F-cWW-cWW-F
J3_56708.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-F-cWW-F-tHW-F-F-F-cWW-F-cWW
J3_58090.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tWW-F-F-F-cWW-F-F-cWW
J3_58453.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-cWH-F-cWW-tWS-F-F-cWW-F
J3_59914.1 1 instances 9 conserved NTs Model Interactions Alignment cWW-F-cWW-F-cWW-F
J3_64069.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tHS-F-F-F-cWW-cWW-F-F
J3_65070.2 3 instances 12 conserved NTs Model Interactions Alignment cWW-tWH-cWW-tSH-F-cWW-F
J3_65990.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-tHW-F-F-cWW-F-F-F-cWW-F
J3_68440.1 1 instances 19 conserved NTs Model Interactions Alignment cWW-cWW-F-F-F-cWW-F-F-cWW-F-F-F-F-F-F
J3_69441.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
J3_72575.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-cWW-F-cWW-cSS-cWW-F-cWW
J3_72804.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-F-F-F-F-F-tHW-F-F-cWW-cWW-F
J3_75187.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-cWW-tSH-F-F-F-F-tHS-cWW-cWW
J3_79305.1 1 instances 19 conserved NTs Model Interactions Alignment cWW-cSH-cWW-cWH-F-tSW-F-F-F-F-F-cWW-cWW-F
J3_82061.2 3 instances 8 conserved NTs Model Interactions Alignment cWW-F-cWW-F-cWW
J3_82365.1 3 instances 10 conserved NTs Model Interactions Alignment cWW-F-F-F-cWW-cWW-F
J3_82572.1 2 instances 11 conserved NTs Model Interactions Alignment cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
J3_83516.1 3 instances 22 conserved NTs Model Interactions Alignment cWW-F-F-F-tWW-F-tSH-tSS-F-F-F-F-F-cWW-cWW-F-F-F
J3_84189.2 3 instances 13 conserved NTs Model Interactions Alignment cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
J3_84625.1 2 instances 13 conserved NTs Model Interactions Alignment cWW-F-cWW-F-F-F-cWW-F-cWW
J3_85054.2 4 instances 14 conserved NTs Model Interactions Alignment cWW-tSH-F-tWW-tHS-cWW-cWW-F
J3_86907.1 1 instances 26 conserved NTs Model Interactions Alignment cWW-F-F-F-tSW-F-tSH-tSS-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
J3_89044.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-cSW-F-cWW-cSW-cWW-cHW-F-cWW
J3_89368.2 3 instances 13 conserved NTs Model Interactions Alignment cWW-tSH-tHW-F-cWW-tHH-cWW
J3_89737.1 1 instances 14 conserved NTs Model Interactions Alignment cWW-F-cWW-tSS-cWW-F-cWW-cWW
J3_90256.1 2 instances 17 conserved NTs Model Interactions Alignment cWW-cWS-F-F-F-F-F-F-cWW-F-tHS-F-cWW-F
J3_90744.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-F-cWW-F-F-cSS-F-F-cWW
J3_91491.2 6 instances 11 conserved NTs Model Interactions Alignment cWW-F-tWW-tHW-cWW-F-cWW
J3_93059.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tWH-cWW-tSH-F-cWW-cWW
J3_93637.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-cWW-F-F-F-F-F-cWW-cWW-F-F
J3_94515.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tWW-F-cWW-F-tHS-F-cWW
J3_94652.1 1 instances 10 conserved NTs Model Interactions Alignment cWW-F-F-F-F-F-cWW-cWW
J3_96170.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-cSH-cWS-tHS-cWH-F-F-cWW-F-tHS-F-cWW-F
J3_96372.1 2 instances 16 conserved NTs Model Interactions Alignment cWW-cSH-cWS-F-F-F-tHW-F-cWW-F-cWW-F
J3_97609.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-tSH-tHW-F-cWW-tHH-F-cWW-F
J3_98102.1 1 instances 15 conserved NTs Model Interactions Alignment cWW-tWH-F-F-tHS-cWW-cWW-cWW-F
J3_98298.1 1 instances 22 conserved NTs Model Interactions Alignment cWW-F-F-F-F-F-F-F-F-tWH-F-F-tHS-cWW-cWW-F-F
J3_98484.1 1 instances 16 conserved NTs Model Interactions Alignment cWW-F-F-tSH-cHW-F-cWW-tSS-cSS-F-cWW-cWW
J3_98985.1 2 instances 12 conserved NTs Model Interactions Alignment cWW-F-cWW-F-F-cSW-F-cWW
J3_99170.1 1 instances 13 conserved NTs Model Interactions Alignment cWW-tSH-tWW-tHW-cWW-F-cWW-F