We are developing a new online resource called RNA 3D Hub, which houses RNA 3D motifs extracted from all atomic-resolution RNA 3D structures deposited in PDB/NDB, and the RNA 3D Motif Atlas, a representative collection of RNA 3D motifs. RNA 3D Hub also hosts non-redundant sets of RNA-containing 3D structures and structural annotations of various pairwise interactions found in 3D structures, such as basepairing and stacking
We host a suite of web applications for searching and superposing RNA 3D structures that is also presented. WebFR3D is the online version of FR3D, a program for symbolic and geometric searching of RNA 3D structures. WebR3DAlign is the online version of R3DAlign, a program for pairwise structural alignment of RNA 3D structures.
New!JAR3D is an application for predicting RNA 3D motifs in sequences and sequence alignments.
