PDBID | FR3D analysis | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
3IZ9 | FR3D | 3472 | 1317 | 5.5 | 12-01-10 | TRITICUM AESTIVUM | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3O58 | FR3D | 3485 | 1088 | 4.0 | 12-15-10 | SACCHAROMYCES CEREVISIAE S288C,SACCHAROMYCES CEREVISIAE | YEAST 80S RIBOSOME. THIS ENTRY CONSISTS OF THE 60S SUBUNIT OF THE FIRST 80S IN THE ASYMMETRIC UNIT. | A.BEN-SHEM,L.JENNER,G.YUSUPOVA,M.YUSUPOV | 3O5H |
3IZF | FR3D | 3436 | 1231 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME (WITH ES27L-IN CONFORMATION) | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3JYX | FR3D | 3440 | 684 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 60S RRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
3PYO | FR3D | 2879 | 1288 | 3.5 | 2-09-11 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 FROM THE PSIV IGR IRES RNA BOUND TO THE 70S RIBOSOME. THIS FILE CONTAINS THE 50S SUBUNIT OF THE FIRST 70S RIBOSOME. | J.ZHU,A.KOROSTELEV,D.COSTANTINO,H.F.NOLLER,J.S.KIEFT | 2V49 3I9E 3D5B 2Y15 1VSA 3I8I 2XG2 2Y0V 3KNI 2Y19 2XTG 2WDL 1YL3 3FIN 2Y17 2J03 3D5D 3I9C 2WDJ 2XG0 3OH5 2V47 3KIR 3MS1 2WRR 3F1H 3OHJ 2WDN 2HGU 3F1F 3OHZ 3PYT 2B9N 3MRZ 3HUZ 2WDI 2Y0X 2HGJ 3KNO 2WRJ 3PYR 2Y11 2HGQ 2Y0Z 2WH4 2B66 1VSP 3KIT 3OI1 3KIY 2X9S 2WRL 3I8F 3KNK 2WRO 3OI3 3PYV 3KIW 3OHK 3OH7 2XQE 3KNM 3HUX 2B9P 2J01 2XUX 2Y13 2WH2 2X9U 3OI5 |
2QBG | FR3D | 2958 | 1357 | 3.3 | 9-25-07 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI IN COMPLEX WITH RIBOSOME RECYCLING FACTOR (RRF). THIS FILE CONTAINS THE 50S SUBUNIT OF THE SECOND 70S RIBOSOME, WITH RRF BOUND. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | M.A.BOROVINSKAYA,R.D.PAI,W.ZHANG,B.-S.SCHUWIRTH,J.M.HOLTON, G.HIROKAWA,H.KAJI,A.KAJI,J.H.D.CATE | 3OFC 3OFZ 2I2V 2GYA 3ORB 2QBE 3E1D 3I1R 3OG0 2QOZ 2J28 2GYC 3FIK 2QAM 3IZU 3I1T 3IZT 2QOX 2AW4 3DF2 3OFD 3I20 3DF4 3BBX 3OFR 2Z4N 3I22 3E1B 2VHM 2QP1 3I1N 1VS6 2QOV 2WWQ 2QBA 3OAS 1VS8 3KCR 2AWB 3OAT 1VT2 2QAO 2QBI 2Z4L 3OFQ 2QBK 2I2T 3I1P 2VHN 2QBC |
1C2W | FR3D | 2891 | 846 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
1PNU | FR3D | 2943 | 938 | 8.7 | 7-15-03 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF A STREPTOMYCIN DEPENDENT RIBOSOME FROM ESCHERICHIA COLI, 50S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNU, CONTAINS ONLY MOLECULES OF THE 50S RIBOSOMAL SUBUNIT. THE 30S SUBUNIT, MRNA, P-SITE TRNA, AND A-SITE TRNA ARE IN THE PDB FILE 1PNS. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VP0 1VOW 1VOR 1PNY 1VOY 1VOU |
2ZJR | FR3D | 2808 | 1180 | 2.9 | 6-17-08 | DEINOCOCCUS RADIODURANS | REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS | J.M.HARMS,D.N.WILSON,F.SCHLUENZEN,S.R.CONNELL,T.STACHELHAUS, Z.ZABOROWSKA,C.M.T.SPAHN,P.FUCINI | 1Z58 2O43 2O45 1JZZ 2AAR 1OND 1NJM 1NJP 2ZJQ 1J5A 2OGO 1NKW 3FWO 2OGM 3JQ4 3DLL 2D3O 2O44 2ZJP 3PIO 1JZY 3PIP 1Y69 1NWX 1K01 1NJO 1XBP 1JZX 1SM1 1P9X 1NJN 2OGN 1NWY 3CF5 |
1S1I | FR3D | 2916 | 1316 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1I, CONTAINS 60S SUBUNIT. THE 40S RIBOSOMAL SUBUNIT IS IN FILE 1S1H. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1S72 | FR3D | 2871 | 1376 | 2.4 | 6-15-04 | HALOARCULA MARISMORTUI | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | D.J.KLEIN,T.M.SCHMEING,P.B.MOORE,T.A.STEITZ | 3CMA 3CCJ 3G4S 1N8R 1VQK 2QEX 1VQ4 1NJI 3CCS 1K9M 3CCL 1VQO 1YHQ 1VQ6 1VQM 2OTL 1FFZ 1Q86 1JJ2 3CCQ 1M90 3CD6 1VQ8 2QA4 3CCV 1KC8 1FG0 1YJ9 3CPW 1Q7Y 1K73 1Q82 1QVF 1YIJ 3I55 3CC7 1FFK 3CCR 1YJW 1M1K 1Q81 3CXC 1VQL 1VQ5 1KQS 3CCE 2OTJ 1K8A 1W2B 3CCM 1VQ7 3CC2 1VQ9 1KD1 1QVG 1YI2 3I56 1VQP 3CC4 3G71 1YIT 3G6E 3CME 3CCU 1VQN 1YJN |
3BBO | FR3D | 2952 | 824 | 9.4 | 5-27-08 | SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 50S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
3O30 | FR3D | 1789 | 482 | 4.0 | 12-15-10 | SACCHAROMYCES CEREVISIAE | YEAST 80S RIBOSOME. THIS ENTRY CONSISTS OF THE 40S SUBUNIT OF THE SECOND 80S IN THE ASYMMETRIC UNIT. | A.BEN-SHEM,L.JENNER,G.YUSUPOVA,M.YUSUPOV | 3O2Z |
3JYV | FR3D | 1820 | 506 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 40S RRNA AND PROTEINS AND P/E TRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
2XZM | FR3D | 1745 | 555 | 3.9 | 1-19-11 | TETRAHYMENA THERMOPHILA | CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1 | J.RABL,M.LEIBUNDGUT,S.F.ATAIDE,A.HAAG,N.BAN | 2XZN |
2AW7 | FR3D | 1530 | 686 | 3.5 | 11-08-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF THE SECOND 70S RIBOSOME. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | B.S.SCHUWIRTH,M.A.BOROVINSKAYA,C.W.HAU,W.ZHANG,A.VILA- SANJURJO,J.M.HOLTON,J.H.D.CATE | 3I1M 3E1C 2VHP 1VS5 2QOW 2QP0 1VS7 2Z4K 3OFX 3E1A 2I2P 2QBJ 2WWL 3OR9 3I1Z 2QBD 3IZW 2QBB 3OAQ 2QAL 3OFA 2AVY 3I1O 2I2U 3OFP 2VHO 2QAN 3FIH 3I1Q 3OFB 2QBF 3DF1 2GY9 3IZV 3OFY 3DF3 2QBH 3I1S 2QB9 3OFO 3OAR 2Z4M 3ORA 2QOY 2GYB 2QOU 3KC4 3I21 |
1FJG | FR3D | 1513 | 690 | 3.0 | 9-25-00 | THERMUS THERMOPHILUS | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | A.P.CARTER,W.M.CLEMONS JR.,D.E.BRODERSEN,B.T.WIMBERLY, R.J.MORGAN-WARREN,V.RAMAKRISHNAN | 3KNN 2UUC 3PYQ 2WH3 2ZM6 2HGP 2Y10 2WH1 2UXC 1HR0 1XNR 2Y0Y 2XQD 3KIX 1I96 2UUA 2X9R 3F1G 1N32 3FIC 1S1H 2J00 3PYU 2X9T 3HUW 2WRI 2OW8 1FKA 3PYN 3I8G 2XUY 3OI0 2V46 2WRN 3KIS 3KNL 3OHD 2XSY 1I95 1IBL 3D5A 2WRK 3OTO 2Y12 3OI4 2HGR 1N34 3HUY 3OI2 2HGI 2WDG 1PNX 3OGY 1XNQ 2XG1 1YL4 2B9O 2UUB 2HHH 2VQF 1VOS 2Y14 3KNH 1HNW 1HNZ 2Y16 2WDK 3D5C 2J02 3KIQ 3OHC 3I9D 2Y18 2F4V 3KNJ 1N36 3MR8 3OHY 3MS0 1XMO 1I97 2Y0U 2QNH 3I8H 3OGE 2V48 1XMQ 1I94 1VOX 2UXB 1IBK 1VOV 3I9B 2B64 3KIU 2VQE 1N33 3F1E 2WDM 1J5E 2WRQ 1HNX 2UXD 2E5L 3PYS 2B9M 2WDH 1VOZ 2XFZ 2Y0W 2UU9 1IBM 1VOQ 1PNS |
3IZ7 | FR3D | 1586 | 477 | 5.5 | 12-01-10 | TRITICUM AESTIVUM | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3IZE | FR3D | 1582 | 438 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3BBN | FR3D | 1478 | 544 | 9.4 | 5-13-08 | SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME. | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
1H1K | FR3D | 1906 | 953 | 10.0 | 9-26-02 | BLUETONGUE VIRUS | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA | J.M.DIPROSE,J.M.GRIMES,G.C.SUTTON,J.N.BURROUGHS,A.MEYER, S.MAAN,P.P.C.MERTENS,D.I.STUART | |
3G78 | FR3D | 398 | 181 | 2.8 | 2-16-10 | OCEANOBACILLUS IHEYENSIS,synthetic | INSIGHT INTO GROUP II INTRON CATALYSIS FROM REVISED CRYSTAL STRUCTURE | J.WANG | 3EOG 3IGI 3EOH |
3IZ4 | FR3D | 377 | 105 | 13.6 | 10-20-10 | ESCHERICHIA COLI | MODIFIED E. COLI TMRNA IN THE RESUME STATE WITH THE TRNA-LIKE DOMAIN IN THE RIBOSOMAL P SITE INTERACTING WITH THE SMPB | Y.HASHEM,J.FU,J.FRANK | |
3IYQ | FR3D | 349 | 58 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3BWP | FR3D | 349 | 154 | 3.1 | 4-15-08 | synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICED GROUP II INTRON | N.TOOR,K.S.KEATING,S.D.TAYLOR,A.M.PYLE | |
3IYR | FR3D | 349 | 54 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3Q1Q | FR3D | 423 | 171 | 3.8 | 3-09-11 | synthetic | STRUCTURE OF A BACTERIAL RIBONUCLEASE P HOLOENZYME IN COMPLEX WITH TRNA | N.J.REITER,A.OSTERMAN,A.TORRES-LARIOS,K.K.SWINGER,T.PAN,A.MONDRAGON | 3Q1R |
2A64 | FR3D | 298 | 117 | 3.3 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF BACTERIAL RIBONUCLEASE P RNA | A.V.KAZANTSEV,A.A.KRIVENKO,D.J.HARRINGTON,S.R.HOLBROOK, P.D.ADAMS,N.R.PACE | |
2J37 | FR3D | 408 | 164 | 8.0 | 11-08-06 | HALOARCULA MARISMORTUI,TRITICUM SP. | MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS | M.HALIC,M.BLAU,T.BECKER,T.MIELKE,M.R.POOL,K.WILD,I.SINNING, R.BECKMANN | |
2A2E | FR3D | 266 | 100 | 3.9 | 9-06-05 | synthetic | CRYSTAL STRUCTURE OF THE RNA SUBUNIT OF RIBONUCLEASE P. BACTERIAL A-TYPE. | A.TORRES-LARIOS,K.K.SWINGER,A.S.KRASILNIKOV,T.PAN, A.MONDRAGON | |
1X8W | FR3D | 968 | 375 | 3.8 | 11-09-04 | synthetic | STRUCTURE OF THE TETRAHYMENA RIBOZYME: BASE TRIPLE SANDWICH AND METAL ION AT THE ACTIVE SITE | F.GUO,A.R.GOODING,T.R.CECH | 1GRZ |
1Y0Q | FR3D | 233 | 89 | 3.6 | 12-21-04 | STAPHYLOCOCCUS PHAGE TWORT,synthetic | CRYSTAL STRUCTURE OF AN ACTIVE GROUP I RIBOZYME-PRODUCT COMPLEX | B.L.GOLDEN,H.KIM,E.CHASE | 2RKJ |
3DHS | FR3D | 215 | 80 | 3.6 | 1-27-09 | synthetic | MAPPING METAL-BINDING SITES IN THE CATALYTIC DOMAIN OF BACTERIAL RNASE P RNA | N.R.PACE,A.V.KAZANTSEV,A.A.KRIVENKO | |
1U6B | FR3D | 219 | 108 | 3.1 | 8-10-04 | synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS | P.L.ADAMS,M.R.STAHLEY,A.B.KOSEK,J.WANG,S.A.STROBEL | 1ZZN 3IIN 3BO4 3BO3 3BO2 |
2NOQ | FR3D | 317 | 115 | 7.3 | 11-21-06 | synthetic,SACCHAROMYCES CEREVISIAE | STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA | M.SCHULER,S.R.CONNELL,A.LESCOUTE,J.GIESEBRECHT,M.DABROWSKI, B.SCHROEER,T.MIELKE,P.A.PENCZEK,E.WESTHOF,C.M.T.SPAHN | |
3DIR | FR3D | 172 | 81 | 2.9 | 9-16-08 | synthetic | CRYSTALLIZATION OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO N6-1-IMINOETHYL-L-LYSINE | A.A.SERGANOV | 3DIS 3DIL 3DIQ 3DIZ 3DJ2 3DIX 3DIM 3DIO 3DIG 3DJ0 3DIY |
3P49 | FR3D | 169 | 48 | 3.5 | 4-06-11 | synthetic | CRYSTAL STRUCTURE OF A GLYCINE RIBOSWITCH FROM FUSOBACTERIUM NUCLEATUM | E.B.BUTLER,J.WANG,Y.XIONG,S.STROBEL | |
3D0U | FR3D | 161 | 76 | 2.8 | 7-01-08 | synthetic | CRYSTAL STRUCTURE OF LYSINE RIBOSWITCH BOUND TO LYSINE | A.D.GARST,A.HEROUX,R.P.RAMBO,R.T.BATEY | 3D0X |
2QBZ | FR3D | 153 | 73 | 2.6 | 9-18-07 | synthetic | STRUCTURE OF THE M-BOX RIBOSWITCH APTAMER DOMAIN | C.E.DANN III,W.C.WINKLER | 3PDR |
1GID | FR3D | 316 | 153 | 2.5 | 12-31-96 | SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING | J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN,C.E.KUNDROT, T.R.CECH,J.A.DOUDNA | 1HR2 1L8V 2R8S |
1U9S | FR3D | 155 | 73 | 2.9 | 10-26-04 | synthetic | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P OF THE A-TYPE | A.S.KRASILNIKOV,Y.XIAO,T.PAN,A.MONDRAGON | |
1NBS | FR3D | 270 | 114 | 3.1 | 2-18-03 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA | A.S.KRASILNIKOV,X.YANG,T.PAN,A.MONDRAGON | |
2NZ4 | FR3D | 594 | 238 | 2.5 | 1-16-07 | synthetic | STRUCTURAL INVESTIGATION OF THE GLMS RIBOZYME BOUND TO ITS CATALYTIC COFACTOR | J.C.COCHRANE | 3G8S 3G9C 3L3C 3G96 3G8T |
3IZD | FR3D | 138 | 59 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF. | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3NDB | FR3D | 136 | 59 | 3.0 | 2-23-11 | METHANOCALDOCOCCUS JANNASCHII DSM 2661 | CRYSTAL STRUCTURE OF A SIGNAL SEQUENCE BOUND TO THE SIGNAL RECOGNITION PARTICLE | T.HAINZL,S.HUANG,E.SAUER-ERIKSSON | |
3HHN | FR3D | 272 | 113 | 3.0 | 11-24-09 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CLASS I LIGASE RIBOZYME SELF-LIGATION PRODUCT, IN COMPLEX WITH U1A RBD | D.M.SHECHNER,R.A.GRANT,S.C.BAGBY,D.P.BARTEL | |
2IL9 | FR3D | 267 | 49 | 3.1 | 2-13-07 | synthetic | CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS | J.S.PFINGSTEN,D.A.COSTANTINO,J.S.KIEFT | |
3IVK | FR3D | 256 | 114 | 3.1 | 3-02-10 | synthetic | CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF AN RNA POLYMERASE RIBOZYME COMPLEXED WITH AN ANTIGEN BINDING ANTIBODY FRAGMENT | Y.KOLDOBSKAYA,E.M.DUGUID,D.M.SHECHNER,S.KOIDE, A.A.KOSSIAKOFF,D.P.BARTEL,J.A.PICCIRILLI | |
1MFQ | FR3D | 127 | 53 | 3.1 | 9-20-02 | HOMO SAPIENS | CRYSTAL STRUCTURE ANALYSIS OF A TERNARY S-DOMAIN COMPLEX OF HUMAN SIGNAL RECOGNITION PARTICLE | A.KUGLSTATTER,C.OUBRIDGE,K.NAGAI | 2GO5 1RY1 1L9A |
2HO7 | FR3D | 141 | 64 | 2.9 | 9-26-06 | synthetic | PRE-CLEAVAGE STATE OF THE THERMOANAEROBACTER TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSE-6-PHOSPHATE | D.J.KLEIN,A.R.FERRE-D'AMARE | 3B4C 2Z74 3B4A 2H0Z 2Z75 2H0S 2H0X 3B4B 2GCV 2HO6 2GCS 2H0W |
1C2X | FR3D | 120 | 35 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
3NPB | FR3D | 119 | 46 | 3.0 | 11-03-10 | BACILLUS SUBTILIS | TL5 RNA STRUCTURE | C.LU | |
3IZZ | FR3D | 337 | 122 | 10.8 | 3-30-11 | ESCHERICHIA COLI | MODELS FOR RIBOSOME COMPONENTS THAT ARE NEAREST NEIGHBORS TO THE BOVINE MITOCHONDRIAL INITIATION FACTOR2 BOUND TO THE E. COLI RIBOSOME | A.S.YASSIN,E.HAQUE,P.P.DATTA,K.ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
1FOQ | FR3D | 545 | 200 | 20.0 | 12-22-00 | BACILLUS PHAGE PHI29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | A.A.SIMPSON,Y.TAO,P.G.LEIMAN,M.O.BADASSO,Y.HE,P.J.JARDINE, N.H.OLSON,M.C.MORAIS,S.GRIMES,D.L.ANDERSON,T.S.BAKER, M.G.ROSSMANN | |
3KTV | FR3D | 215 | 80 | 3.8 | 2-16-10 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE HUMAN SRP19/S-DOMAIN SRP RNA COMPLEX | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
3F2Q | FR3D | 107 | 49 | 3.0 | 1-27-09 | synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO FMN | A.A.SERGANOV,L.HUANG | 3F2W 3F2Y 3F30 3F2T 3F2X |
2XXA | FR3D | 204 | 80 | 3.9 | 3-02-11 | DEINOCOCCUS RADIODURANS | THE CRYSTAL STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE (SRP) IN COMPLEX WITH ITS RECEPTOR(SR) | S.F.ATAIDE,N.SCHMITZ,K.SHEN,A.KE,S.SHAN,J.A.DOUDNA,N.BAN | |
2KRL | FR3D | 1020 | 218 | SOLUTION NMR; SOLUTION SCATTERING | 2-09-11 | TURNIP CRINKLE VIRUS | THE ENSEMBLE OF THE SOLUTION GLOBAL STRUCTURES OF THE 102-NT RIBOSOME BINDING STRUCTURE ELEMENT OF THE TURNIP CRINKLE VIRUS 3' UTR RNA | X.ZUO,J.WANG,P.YU,D.EYLER,H.XU,M.STARICH,D.TIEDE,A.SIMON,W.KASPRZAK, C.SCHWIETERS,B.SHAPIRO | |
1S9S | FR3D | 2020 | 754 | SOLUTION NMR | 4-06-04 | synthetic | SOLUTION STRUCTURE OF MLV PSI SITE | V.D'SOUZA,A.DEY,D.HABIB,M.F.SUMMERS | |
1LNG | FR3D | 97 | 44 | 2.3 | 6-07-02 | METHANOCALDOCOCCUS JANNASCHII | CRYSTAL STRUCTURE OF THE SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII | T.HAINZL,S.HUANG,A.E.SAUER-ERIKSSON | 1Z43 2V3C |
1YSH | FR3D | 162 | 65 | 9.5 | 7-05-05 | synthetic | LOCALIZATION AND DYNAMIC BEHAVIOR OF RIBOSOMAL PROTEIN L30E | M.HALIC,T.BECKER,J.FRANK,C.M.SPAHN,R.BECKMANN | |
3KTW | FR3D | 191 | 67 | 3.2 | 2-16-10 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE SRP19/S-DOMAIN SRP RNA COMPLEX OF SULFOLOBUS SOLFATARICUS | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
2XKV | FR3D | 96 | 9 | 13.5 | 12-15-10 | ESCHERICHIA COLI | ATOMIC MODEL OF THE SRP-FTSY EARLY CONFORMATION | L.F.ESTROZI,D.BOEHRINGER,S.-O.SHAN,N.BAN,C.SCHAFFITZEL | |
2OM7 | FR3D | 455 | 151 | 7.3 | 1-15-08 | THERMUS THERMOPHILUS | STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS | S.R.CONNELL,D.N.WILSON,M.ROST,M.SCHUELER,J.GIESEBRECHT, M.DABROWSKI,T.MIELKE,P.FUCINI,C.M.T.SPAHN | |
2GIS | FR3D | 94 | 44 | 2.9 | 7-04-06 | synthetic | STRUCTURE OF THE S-ADENOSYLMETHIONINE RIBOSWITCH MRNA REGULATORY ELEMENT | R.K.MONTANGE,R.T.BATEY | 3GX6 3IQN 3GX3 3IQR 3GX2 3IQP 3GX5 3GX7 |
1U6P | FR3D | 2000 | 727 | SOLUTION NMR | 11-02-04 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE OF THE MLV ENCAPSIDATION SIGNAL BOUND TO THE NUCLEOCAPSID PROTEIN | V.D'SOUZA,M.F.SUMMERS | |
3IWN | FR3D | 186 | 57 | 3.2 | 11-10-09 | synthetic | CO-CRYSTAL STRUCTURE OF A BACTERIAL C-DI-GMP RIBOSWITCH | N.KULSHINA,N.J.BAIRD,A.R.FERRE-D'AMARE | |
3ADD | FR3D | 176 | 73 | 2.4 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 3) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | 3ADB |
3CUL | FR3D | 182 | 67 | 2.8 | 6-24-08 | HOMO SAPIENS,engineered | AMINOACYL-TRNA SYNTHETASE RIBOZYME | H.XIAO,H.MURAKAMI,H.SUGA,A.R.FERRE-D'AMARE | 3CUN |
1M5O | FR3D | 224 | 94 | 2.2 | 10-12-02 | synthetic | TRANSITION STATE STABILIZATION BY A CATALYTIC RNA | P.B.RUPERT,A.P.MASSEY,S.T.SIGURDSSON,A.R.FERRE-D'AMARE | 1M5P 1M5V 1M5K |
3ADC | FR3D | 180 | 70 | 2.9 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 2) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | |
3MUR | FR3D | 91 | 38 | 3.0 | 8-25-10 | synthetic | CRYSTAL STRUCTURE OF THE C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI- GMP | S.A.STROBEL,K.D.SMITH | 3MXH 3MUT 3MUM 3IRW 3MUV |
1WZ2 | FR3D | 176 | 66 | 3.2 | 9-06-05 | synthetic | THE CRYSTAL STRUCTURE OF LEUCYL-TRNA SYNTHETASE AND TRNA(LEUCINE) COMPLEX | R.FUKUNAGA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1DUH | FR3D | 88 | 38 | 2.7 | 5-08-00 | synthetic | CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA | L.JOVINE,T.HAINZL,C.OUBRIDGE,W.G.SCOTT,J.LI,T.K.SIXMA, A.WONACOTT,T.SKARZYNSKI,K.NAGAI | |
3OWZ | FR3D | 168 | 79 | 3.0 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN IRIDIUM | L.HUANG,A.SERGANOV,D.J.PATEL | 3OXB 3OXJ 3OWI 3OWW 3OX0 3OXE 3OXD 3OXM |
3A3A | FR3D | 86 | 34 | 3.1 | 8-11-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN SELENOCYSTINE TRNA | Y.ITOH,S.CHIBA,S.I.SEKINE,S.YOKOYAMA | 3HL2 |
3K0J | FR3D | 166 | 70 | 3.1 | 12-22-09 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI THIM RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE AND THE U1A CRYSTALLIZATION MODULE | N.KULSHINA,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
2ZZM | FR3D | 84 | 27 | 2.6 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNALEU | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
3AM1 | FR3D | 81 | 34 | 2.4 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF PROTEIN | Y.ARAISO,R.ISHITANI,O.NUREKI | |
2GDI | FR3D | 156 | 74 | 2.0 | 7-04-06 | synthetic | CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE | A.SERGANOV | |
2BTE | FR3D | 156 | 69 | 2.9 | 9-15-05 | THERMUS THERMOPHILUS | THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE | S.CUSACK,M.TUKALO,A.YAREMCHUK,R.FUKUNAGA,S.YOKOYAMA | 2V0G 2BYT |
1P5P | FR3D | 77 | 28 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN II (MINIMIZED AVERAGE STRUCTURE) | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | 1P5O |
1J2B | FR3D | 148 | 40 | 3.3 | 5-27-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE COMPLEXED WITH LAMBDA-FORM TRNA(VAL) | R.ISHITANI,O.NUREKI,N.NAMEKI,N.OKADA,S.NISHIMURA,S.YOKOYAMA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3D2V | FR3D | 154 | 71 | 2.0 | 7-01-08 | ARABIDOPSIS THALIANA | STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE | S.THORE,C.FRICK,N.BAN | 2CKY 3D2X 3D2G |
1H3E | FR3D | 77 | 31 | 2.9 | 10-27-02 | THERMUS THERMOPHILUS | TYROSYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH WILD-TYPE TRNATYR(GUA) AND WITH ATP AND TYROSINOL | S.CUSACK,A.YAREMCHUK,I.KRIKLIVYI,M.TUKALO | |
3A2K | FR3D | 154 | 52 | 3.6 | 10-20-09 | synthetic | CRYSTAL STRUCTURE OF TILS COMPLEXED WITH TRNA | K.NAKANISHI,L.BONNEFOND,R.ISHITANI,O.NUREKI | |
2K4C | FR3D | 76 | 30 | SOLUTION NMR; SOLUTION SCATTERING | 12-09-08 | ESCHERICHIA COLI | TRNAPHE-BASED HOMOLOGY MODEL FOR TRNAVAL REFINED AGAINST BASE N-H RDCS IN TWO MEDIA AND SAXS DATA | A.GRISHAEV,J.YING,M.D.CANNY,A.PARDI,A.BAX | |
1I9V | FR3D | 73 | 29 | 2.6 | 6-04-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX | N.E.MIKKELSEN,K.JOHANSSON,A.VIRTANEN,L.A.KIRSEBOM | 1ZO3 1ZO1 |
1EIY | FR3D | 76 | 27 | 3.3 | 3-06-00 | THERMUS THERMOPHILUS HB8 | THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE | Y.GOLDGUR,L.MOSYAK,L.RESHETNIKOVA,V.ANKILOVA,M.SAFRO | 2IY5 |
2HOJ | FR3D | 74 | 33 | 2.5 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO THIAMINE PYROPHOSPHATE, MANGANESE IONS | T.E.EDWARDS,A.R.FERRE-D'AMARE | 2HOK 2HOO 2HOM 2HOL |
3IZY | FR3D | 76 | 4 | 10.8 | 3-23-11 | BOS TAURUS | MAMMALIAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 2 | A.S.YASSIN,E HAQUE,P.P DATTA,K ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
2NR0 | FR3D | 272 | 99 | 3.9 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
3DEG | FR3D | 298 | 113 | 10.0 | 8-19-08 | ESCHERICHIA COLI | COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP | S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI, K.H.NIERHAUS,C.M.T.SPAHN | 2FMT 3CW5 3CW6 |
2CV1 | FR3D | 150 | 65 | 2.4 | 9-05-06 | synthetic | GLUTAMYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA(GLU), ATP, AND AN ANALOG OF L-GLUTAMATE: A QUATERNARY COMPLEX | S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2CV2 1G59 1N77 2DXI 1N78 2CV0 |
2IHX | FR3D | 1500 | 537 | SOLUTION NMR | 1-16-07 | ROUS SARCOMA VIRUS | SOLUTION STRUCTURE OF THE ROUS SARCOMA VIRUS NUCLEOCAPSID PROTEIN:UPSI RNA PACKAGING SIGNAL COMPLEX | J.ZHOU,M.SUMMERS | |
2ZUE | FR3D | 75 | 29 | 2.0 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII ARGINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(ARG) AND AN ATP ANALOG (ANP) | M.KONNO,T.SUMIDA,E.UCHIKAWA,Y.MORI,T.YANAGISAWA,S.SEKINE, S.YOKOYAMA | 2ZUF |
2AKE | FR3D | 72 | 21 | 3.1 | 7-11-06 | BOS TAURUS | STRUCTURE OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE IN COMPLEX WITH TRNA(TRP) | N.SHEN,L.GUO,B.YANG,Y.JIN,J.DING | 2DR2 |
1QU2 | FR3D | 75 | 31 | 2.2 | 8-31-99 | STAPHYLOCOCCUS AUREUS | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | L.F.SILVIAN,J.WANG,T.A.STEITZ | 1QU3 1FFY |
1GAX | FR3D | 150 | 60 | 2.9 | 12-06-00 | synthetic | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE | S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,J.TAO,D.G.VASSYLYEV, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 1IVS |
2CT8 | FR3D | 148 | 53 | 2.7 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS METHIONYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(MET) AND METHIONYL-ADENYLATE ANOLOGUE | K.NAKANISHI,Y.OGISO,T.NAKAMA,S.FUKAI,O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2CSX |
1O0C | FR3D | 74 | 31 | 2.7 | 4-15-03 | synthetic | CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | T.L.BULLOCK,J.J.PERONA | 1EUQ 1EUY 1QRS 1GTS 1QTQ 1QRU 2RE8 1ZJW 1GTR 1O0B 1QRT 1EXD 2RD2 |
3FOZ | FR3D | 143 | 58 | 2.5 | 1-20-09 | synthetic | STRUCTURE OF E. COLI ISOPENTENYL-TRNA TRANSFERASE IN COMPLEX WITH E. COLI TRNA(PHE) | E.SEIF,B.M.HALLBERG | 2ZXU 2ZM5 |
1VBY | FR3D | 73 | 30 | 2.9 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE HEPATITIS DELTA VIRUS GEMONIC RIBOZYME PRECURSOR, WITH C75U MUTAION, AND MN2+ BOUND | A.KE,K.ZHOU,F.DING,J.H.D.CATE,J.A.DOUDNA | 1SJ4 1SJ3 1VC0 1VC7 1SJF 1DRZ 1VC6 2OIH 1VBZ 2OJ3 1VC5 1VBX 1CX0 |
1J1U | FR3D | 74 | 31 | 1.9 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEAL TYROSYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(TYR) AND L-TYROSINE | T.KOBAYASHI,O.NUREKI,R.ISHITANI,M.TUKALO,S.CUSACK, K.SAKAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3AL0 | FR3D | 74 | 30 | 3.4 | 9-29-10 | synthetic | CRYSTAL STRUCTURE OF THE GLUTAMINE TRANSAMIDOSOME FROM THERMOTOGA MARITIMA IN THE GLUTAMYLATION STATE. | T.ITO,S.YOKOYAMA | 3AKZ |
1U0B | FR3D | 74 | 30 | 2.3 | 11-23-04 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF CYSTEINYL-TRNA SYNTHETASE BINARY COMPLEX WITH TRNACYS | S.HAUENSTEIN,C.M.ZHANG,Y.M.HOU,J.J.PERONA | |
2D6F | FR3D | 146 | 50 | 3.1 | 7-11-06 | synthetic | CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN) | O.NUREKI | |
2DER | FR3D | 145 | 55 | 3.1 | 8-15-06 | synthetic | COCRYSTAL STRUCTURE OF AN RNA SULFURATION ENZYME MNMA AND TRNA-GLU IN THE INITIAL TRNA BINDING STATE | T.NUMATA,Y.IKEUCHI,S.FUKAI,T.SUZUKI,O.NUREKI | 2DET 2DEU |
3L0U | FR3D | 73 | 30 | 3.0 | 3-16-10 | synthetic | THE CRYSTAL STRUCTURE OF UNMODIFIED TRNAPHE FROM ESCHERICHIA COLI | R.T.BYRNE,A.L.KONEVEGA,M.V.RODNINA,A.A.ANTSON | |
2AZX | FR3D | 144 | 60 | 2.8 | 8-01-06 | synthetic | CHARGED AND UNCHARGED TRNAS ADOPT DISTINCT CONFORMATIONS WHEN COMPLEXED WITH HUMAN TRYPTOPHANYL-TRNA SYNTHETASE | X.L.YANG,F.J.OTERO,K.L.EWALT,J.LIU,M.A.SWAIRJO,C.KOHRER, U.L.RAJBHANDARY,R.J.SKENE,D.E.MCREE,P.SCHIMMEL | |
2ZNI | FR3D | 144 | 52 | 3.1 | 12-30-08 | synthetic | CRYSTAL STRUCTURE OF PYRROLYSYL-TRNA SYNTHETASE-TRNA(PYL) COMPLEX FROM DESULFITOBACTERIUM HAFNIENSE | K.NOZAWA,Y.ARAISO,D.SOLL,R.ISHITANI,O.NUREKI | |
2DU3 | FR3D | 71 | 26 | 2.6 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE COMPLEXED WITH TRNACYS AND O-PHOSPHOSERINE | R.FUKUNAGA | 2DU6 2DU4 2DU5 |
1Y26 | FR3D | 71 | 35 | 2.1 | 12-28-04 | VIBRIO VULNIFICUS | A-RIBOSWITCH-ADENINE COMPLEX | A.SERGANOV,Y.R.YUAN,D.J.PATEL | |
2L3J | FR3D | 1349 | 588 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | THE SOLUTION STRUCTURE OF THE ADAR2 DSRBM-RNA COMPLEX REVEALS A SEQUENCE-SPECIFIC READ OUT OF THE MINOR GROOVE | R.STEFL,F.C.OBERSTRASS,F.H.-T.ALLAIN | |
2ZZN | FR3D | 142 | 58 | 3.0 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNACYS | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
2OIU | FR3D | 142 | 62 | 2.6 | 3-13-07 | synthetic | L1 RIBOZYME LIGASE CIRCULAR ADDUCT | M.P ROBERTSON,W.G.SCOTT | |
3LA5 | FR3D | 71 | 35 | 1.7 | 1-26-10 | BACILLUS SUBTILIS | X-RAY CRYSTAL STRUCTURE OF MC6 RNA RIBOSWITCH BOUND TO AZACYTOSINE | M.S.DUNSTAN,D.LEYS | |
3KFU | FR3D | 278 | 110 | 3.0 | 8-25-10 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF THE TRANSAMIDOSOME | M.BLAISE,M.BAILLY,M.FRECHIN,S.THIRUP,H.D.BECKER,D.KERN | |
1KXK | FR3D | 70 | 28 | 3.0 | 3-22-02 | synthetic | CRYSTAL STRUCTURE OF A RNA MOLECULE CONTAINING DOMAIN 5 AND 6 OF THE YEAST AI5G GROUP II SELF-SPLICING INTRON | L.ZHANG,J.A.DOUDNA | |
3EPH | FR3D | 138 | 48 | 3.0 | 11-04-08 | synthetic | CRYSTALLOGRAPHIC SNAPSHOTS OF EUKARYOTIC DIMETHYLALLYLTRANSFERASE ACTING ON TRNA: INSIGHT INTO TRNA RECOGNITION AND REACTION MECHANISM | R.H.HUANG,C.ZHOU | 3EPL 3EPJ 3EPK |
3IVN | FR3D | 138 | 60 | 2.8 | 1-19-10 | BACILLUS SUBTILIS | STRUCTURE OF THE U65C MUTANT A-RIBOSWITCH APTAMER FROM THE BACILLUS SUBTILIS PBUE OPERON | V.DELFOSSE,P.DAGENAIS,D.CHAUSSE,G.DI TOMASSO,P.LEGAULT | |
1QF6 | FR3D | 69 | 29 | 2.9 | 5-06-99 | ESCHERICHIA COLI | STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA | R.SANKARANARAYANAN,A.C.DOCK-BREGEON,B.REES,D.MORAS | |
3MOJ | FR3D | 69 | 26 | 2.9 | 8-04-10 | ESCHERICHIA COLI | STRUCTURE OF THE RNA BINDING DOMAIN OF THE BACILLUS SUBTILIS YXIN PROTEIN COMPLEXED WITH A FRAGMENT OF 23S RIBOSOMAL RNA | J.W.HARDIN,Y.HU,D.B.MCKAY | |
2HOP | FR3D | 69 | 23 | 3.3 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO PYRITHIAMINE | T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1GIX | FR3D | 198 | 71 | 5.5 | 5-04-01 | THERMUS THERMOPHILUS,synthetic | CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIX, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY | M.M.YUSUPOV,G.Z.YUSUPOVA,A.BAUCOM,K.LIEBERMAN,T.N.EARNEST, J.H.D.CATE,H.F.NOLLER | 1JGQ 1JGO 1JGP |
1C0A | FR3D | 68 | 25 | 2.4 | 11-23-99 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE : TRNAASP : ASPARTYL-ADENYLATE COMPLEX | S.EILER,A.-C.DOCK-BREGEON,L.MOULINIER,J.-C.THIERRY,D.MORAS | |
2QUS | FR3D | 136 | 48 | 2.4 | 7-15-08 | synthetic | HAMMERHEAD RIBOZYME G12A MUTANT PRE-CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | |
3HAY | FR3D | 81 | 27 | 5.0 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND FULL H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
3BBV | FR3D | 67 | 21 | 10.0 | 10-21-08 | THERMUS THERMOPHILUS | THE TRNA(PHE) FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX | L.JIANG,J.P.ABRAHAMS | |
1IL2 | FR3D | 129 | 56 | 2.6 | 9-28-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE:YEAST TRNAASP:ASPARTYL-ADENYLATE COMPLEX | L.MOULINIER,S.EILER,G.ERIANI,J.GANGLOFF,J.C.THIERRY, K.GABRIEL,W.H.MCCLAIN,D.MORAS | 1ASZ 1ASY |
3FO4 | FR3D | 63 | 32 | 1.9 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-CHLOROGUANINE | S.D.GILBERT,R.T.BATEY | 3GAO 2EES 2G9C 2EEW 3FO6 2B57 3GOT 3GES 2XNZ 1Y27 2EEU 3DS7 2EET 3GOG 1U8D 2EEV 3G4M 3GER |
1B23 | FR3D | 66 | 23 | 2.6 | 12-07-98 | ESCHERICHIA COLI | E. COLI CYSTEINYL-TRNA AND T. AQUATICUS ELONGATION FACTOR EF-TU:GTP TERNARY COMPLEX | P.NISSEN,M.KJELDGAARD,S.THIRUP,J.NYBORG | |
2L1F | FR3D | 2620 | 1069 | SOLUTION NMR | 10-27-10 | MOLONEY MURINE LEUKEMIA VIRUS | STRUCTURE OF A CONSERVED RETROVIRAL RNA PACKAGING ELEMENT BY NMR SPECTROSCOPY AND CRYO-ELECTRON TOMOGRAPHY | M.F.SUMMERS,R.N.IROBALIEVA,B.TOLBERT,A.SMALLS-MANTY,K.IYALLA, K.LOELIGER,V.D'SOUZA,H.KHANT,M.SCHMID,E.GARCIA,A.TELESNITSKY,W.CHIU, Y.MIYAZAKI | |
2NQP | FR3D | 65 | 21 | 3.5 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
1H4S | FR3D | 65 | 26 | 2.9 | 6-18-01 | THERMUS THERMOPHILUS | PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE | A.YAREMCHUK,M.TUKALO,S.CUSACK | 1H4Q |
2TRA | FR3D | 65 | 28 | 3.0 | 11-06-87 | SACCHAROMYCES CEREVISIAE | RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS | E.WESTHOF,P.DUMAS,D.MORAS | 3TRA |
3NKB | FR3D | 70 | 31 | 1.9 | 9-01-10 | HOMO SAPIENS | A 1.9A CRYSTAL STRUCTURE OF THE HDV RIBOZYME PRECLEAVAGE SUGGESTS BOTH LEWIS ACID AND GENERAL ACID MECHANISMS CONTRIBUTE TO PHOSPHODIESTER CLEAVAGE | J.-H.CHEN,R.YAJIMA,D.M.CHADALAVADA,E.CHASE,P.C.BEVILACQUA,B.L.GOLDEN | |
3EGZ | FR3D | 64 | 20 | 2.2 | 10-28-08 | synthetic | CRYSTAL STRUCTURE OF AN IN VITRO EVOLVED TETRACYCLINE APTAMER AND ARTIFICIAL RIBOSWITCH | H.XIAO,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1YFG | FR3D | 64 | 23 | 3.0 | 9-03-97 | SACCHAROMYCES CEREVISIAE | YEAST INITIATOR TRNA | R.BASAVAPPA,P.B.SIGLER | |
486D | FR3D | 195 | 79 | 7.5 | 10-04-99 | ESCHERICHIA COLI,SACCHAROMYCES CEREVISIAE,THERMUS THERMOPHILUS,synthetic | X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES | J.H.CATE,M.M.YUSUPOV,G.ZH.YUSUPOVA,T.N.EARNEST,H.F.NOLLER | |
2WWB | FR3D | 136 | 47 | 6.5 | 12-08-09 | TRITICUM AESTIVUM | CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | 2WW9 2WWA |
1F7V | FR3D | 60 | 22 | 2.9 | 6-27-01 | synthetic | CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG | B.DELAGOUTTE,D.MORAS,J.CAVARELLI | 1F7U |
1FCW | FR3D | 310 | 118 | 17.0 | 8-11-00 | SACCHAROMYCES CEREVISIAE | TRNA POSITIONS DURING THE ELONGATION CYCLE | R.K.AGRAWAL,C.M.T.SPAHN,P.PENCZEK,R.A.GRASSUCCI, K.H.NIERHAUS,J.FRANK | 1SZ1 1TRA 1TTT 1EHZ 1ML5 1OB2 1MJ1 1TN2 4TRA 6TNA 4TNA 1EVV 1OB5 |
1EFW | FR3D | 126 | 50 | 3.0 | 6-19-00 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF ASPARTYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED TO TRNAASP FROM ESCHERICHIA COLI | C.BRIAND,A.POTERSZMAN,S.EILER,G.WEBSTER,J.-C.THIERRY,D.MORAS | |
3ICQ | FR3D | 122 | 38 | 3.2 | 8-25-09 | synthetic | KARYOPHERIN NUCLEAR STATE | A.G.COOK,N.FUKUHARA,M.JINEK,E.CONTI | |
1UN6 | FR3D | 122 | 50 | 3.1 | 11-20-03 | XENOPUS LAEVIS | THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION | D.LU,M.A.SEARLES,A.KLUG | |
1SER | FR3D | 61 | 25 | 2.9 | 4-30-94 | THERMUS THERMOPHILUS | THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER | S.BIOU,V.CUSACK,A.YAREMCHUK,M.TUKALO | |
1FIR | FR3D | 61 | 22 | 3.3 | 1-17-01 | BOS TAURUS | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3) | P.BENAS,P.DUMAS | |
2CZJ | FR3D | 240 | 69 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TMRNA FROM THERMUS THERMOPHILUS HB8 | Y.BESSHO,R.SHIBATA,S.SEKINE,K.MURAYAMA,M.SHIROUZU, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3HJW | FR3D | 70 | 30 | 2.4 | 6-23-09 | synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | 3LWR 3LWV 3LWQ 3LWP 3LWO |
1QA6 | FR3D | 116 | 54 | 2.8 | 5-25-99 | synthetic | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | G.L.CONN,D.E.DRAPER,E.E.LATTMAN,A.G.GITTIS | 1C04 1Y39 1HC8 |
3HAX | FR3D | 71 | 31 | 2.1 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND GAR1-MINUS H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1MMS | FR3D | 116 | 52 | 2.6 | 4-17-00 | synthetic | CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX | B.T.WIMBERLY,R.GUYMON,J.P.MCCUTCHEON,S.W.WHITE, V.RAMAKRISHNAN | 2JQ7 1OLN |
2QUW | FR3D | 134 | 49 | 2.2 | 7-15-08 | synthetic | HAMMERHEAD RIBOZYME G12A MUTANT AFTER CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | |
2HVY | FR3D | 57 | 20 | 2.3 | 9-12-06 | synthetic | CRYSTAL STRUCTURE OF AN H/ACA BOX RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1F7Y | FR3D | 57 | 24 | 2.8 | 11-22-00 | synthetic | THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | E.ENNIFAR,A.NIKOULINE,A.SERGANOV,S.TISHCHENKO,N.NEVSKAYA, M.GARBER,B.EHRESMANN,C.EHRESMANN,S.NIKONOV,P.DUMAS | 1DK1 1KUQ |
2DLC | FR3D | 57 | 20 | 2.4 | 6-12-07 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF YEAST TYROSYL- TRNA SYNTHETASE | M.TSUNODA,Y.KUSAKABE,N.TANAKA,K.T.NAKAMURA | |
3F4G | FR3D | 109 | 51 | 3.0 | 1-27-09 | synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO RIBOFLAVIN. | A.A.SERGANOV,L.HUANG | 3F4H 3F4E |
2NRE | FR3D | 56 | 18 | 4.0 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
2KZL | FR3D | 440 | 132 | SOLUTION NMR | 2-23-11 | BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 | SPECIFIER DOMAIN AND GA MOTIF REGION OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG | |
1P5M | FR3D | 1210 | 416 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIA | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2HGH | FR3D | 1100 | 480 | SOLUTION NMR | 8-01-06 | XENOPUS LAEVIS | TRANSCRIPTION FACTOR IIIA ZINC FINGERS 4-6 BOUND TO 5S RRNA 55MER (NMR STRUCTURE) | B.M.LEE | |
1MZP | FR3D | 55 | 25 | 2.6 | 1-21-03 | synthetic | STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME | A.NIKULIN,I.ELISEIKINA,S.TISHCHENKO,N.NEVSKAYA,N.DAVYDOVA, O.PLATONOVA,W.PIENDL,M.SELMER,A.LILJAS,R.ZIMMERMANN, M.GARBER,S.NIKONOV | |
2FK6 | FR3D | 53 | 20 | 2.9 | 3-21-06 | synthetic | CRYSTAL STRUCTURE OF RNASE Z/TRNA(THR) COMPLEX | I.LI DE LA SIERRA-GALLAY,N.MATHY,O.PELLEGRINI,C.CONDON | |
3E5C | FR3D | 52 | 21 | 2.2 | 10-07-08 | synthetic | CRYSTAL STRUCTURE OF THE SMK BOX (SAM-III) RIBOSWITCH WITH SAM | C.LU | 3E5E 3E5F |
2QWY | FR3D | 156 | 62 | 2.8 | 1-22-08 | synthetic | SAM-II RIBOSWITCH BOUND TO S-ADENOSYLMETHIONINE | S.D.GILBERT,R.P.RAMBO,D.VAN TYNE,R.T.BATEY | |
3NPN | FR3D | 50 | 18 | 2.8 | 10-06-10 | RALSTONIA SOLANACEARUM | STRUCTURE OF THE S-ADENOSYLHOMOCYSTEINE RIBOSWITCH AT 3.0A | F.E.REYES,A.E.EDWARDS,R.T.BATEY | 3NPQ |
2PXV | FR3D | 49 | 22 | 2.0 | 8-07-07 | synthetic | VARIANT 6 OF RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT | 2PXF 2PXB 2PXK 1DUL 2PXD 2PXT 2PXU 2PXP 3LQX 2PXE 2PXQ 2PXL 1HQ1 |
1RMN | FR3D | 49 | 19 | FLUORESCENCE TRANSFER | 1-26-95 | synthetic | A THREE-DIMENSIONAL MODEL FOR THE HAMMERHEAD RIBOZYME BASED ON FLUORESCENCE MEASUREMENTS | T.TUSCHL,C.GOHLKE,T.M.JOVIN,E.WESTHOF,F.ECKSTEIN | |
1E8O | FR3D | 49 | 18 | 3.2 | 11-08-00 | HOMO SAPIENS | CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP | O.WEICHENRIEDER,K.WILD,K.STRUB,S.CUSACK | |
1U63 | FR3D | 98 | 40 | 3.4 | 4-12-05 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX | N.NEVSKAYA,S.TISHCHENKO,A.GABDOULKHAKOV,E.NIKONOVA, O.NIKONOV,A.NIKULIN,M.GARBER,S.NIKONOV,W.PIENDL | |
2KUU | FR3D | 576 | 230 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (GC MUTANT IN UPPER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | 2KUR 2KUV 2KE6 |
2VPL | FR3D | 94 | 38 | 2.3 | 9-23-08 | METHANOCALDOCOCCUS JANNASCHII | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | V.KLJASHTORNY,S.TISHCHENKO,N.NEVSKAYA,S.NIKONOV,M.GARBER | |
2KUW | FR3D | 528 | 208 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (A-FORM MUTANT IN LOWER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | |
1YMO | FR3D | 940 | 417 | SOLUTION NMR | 3-15-05 | synthetic | SOLUTION STRUCTURE OF THE P2B-P3 PSEUDOKNOT FROM HUMAN TELOMERASE RNA | C.A.THEIMER,C.A.BLOIS,J.FEIGON | 2K96 2K95 |
1S03 | FR3D | 94 | 42 | 2.7 | 5-25-04 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX | H.J.MERIANOS,J.WANG,P.B.MOORE | |
3CIY | FR3D | 92 | 46 | 3.4 | 5-06-08 | synthetic,MUS MUSCULUS | MOUSE TOLL-LIKE RECEPTOR 3 ECTODOMAIN COMPLEXED WITH DOUBLE- STRANDED RNA | L.LIU,I.BOTOS,Y.WANG,J.N.LEONARD,J.SHILOACH,D.M.SEGAL, D.R.DAVIES | |
1XJR | FR3D | 46 | 20 | 2.7 | 2-01-05 | synthetic | THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME | M.P.ROBERTSON,H.IGEL,R.BAERTSCH,D.HAUSSLER,M.ARES JR., W.G.SCOTT | |
3IAB | FR3D | 46 | 13 | 2.7 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF RNASE P /RNASE MRP PROTEINS POP6, POP7 IN A COMPLEX WITH THE P3 DOMAIN OF RNASE MRP RNA | A.PEREDERINA,O.A.ESAKOVA,C.QUAN,E.KHANOVA,A.S.KRASILNIKOV | |
2NUE | FR3D | 46 | 21 | 2.9 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 2.9-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
1Z2J | FR3D | 900 | 400 | SOLUTION NMR | 6-14-05 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING ELEMENT | D.W.STAPLE,S.E.BUTCHER | 1ZC5 |
1QZW | FR3D | 180 | 44 | 4.1 | 11-18-03 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION | K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING | |
1P6V | FR3D | 69 | 17 | 3.2 | 8-12-03 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TRANSFER-MESSENGER RNA IN COMPLEX WITH SMPB | S.GUTMANN,P.W.HAEBEL,L.METZINGER,M.SUTTER,B.FELDEN,N.BAN | |
1G1X | FR3D | 169 | 63 | 2.6 | 10-30-00 | synthetic | STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA | S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT,J.R.WILLIAMSON | |
1A60 | FR3D | 1056 | 312 | SOLUTION NMR | 5-27-98 | TURNIP YELLOW MOSAIC VIRUS | NMR STRUCTURE OF A CLASSICAL PSEUDOKNOT: INTERPLAY OF SINGLE-AND DOUBLE-STRANDED RNA, 24 STRUCTURES | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2ADT | FR3D | 1720 | 921 | SOLUTION NMR | 7-26-05 | synthetic | NMR STRUCTURE OF A 30 KDA GAAA TETRALOOP-RECEPTOR COMPLEX. | J.H.DAVIS,M.TONELLI,L.G.SCOTT,L.JAEGER,J.R.WILLIAMSON, S.E.BUTCHER | 2I7Z 2JYF 2JYJ 2I7E 2JYH |
2FEY | FR3D | 430 | 120 | SOLUTION NMR | 6-27-06 | synthetic | THE STRUCTURE OF STEM LOOP IV OF TETRAHYMENA TELOMERASE RNA | Y.CHEN,J.FENDER,J.D.LEGASSIE,M.B.JARSTFER,T.M.BRYAN,G.VARANI | |
1CQL | FR3D | 430 | 135 | SOLUTION NMR | 1-14-00 | ESCHERICHIA COLI | NMR STRUCTURE OF SRP RNA DOMAIN IV | U.SCHMITZ,T.L.JAMES | 1CQ5 |
1KH6 | FR3D | 42 | 16 | 2.9 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF AN RNA TERTIARY DOMAIN ESSENTIAL TO HCV IRES-MEDIATED TRANSLATION INITIATION. | J.S.KIEFT,K.ZHOU,A.GRECH,R JUBIN,J.A.DOUDNA | |
2L2J | FR3D | 840 | 373 | SOLUTION NMR | 10-27-10 | HOMO SAPIENS | SOLUTION NMR STRUCTURE OF THE LOWER PART OF THE R/G STEM LOOP RNA | F.F.OBERSTRASS,F.H.-T.ALLAIN,R.STEFL | 2L2K |
2KX8 | FR3D | 420 | 161 | SOLUTION NMR | 9-08-10 | HOMO SAPIENS | NMR STRUCTURE OF STEM-LOOP 4 FROM THE HUMAN 7SK SNRNA IN COMPLEX WITH ARGININE | M.A.DURNEY,V.M.D'SOUZA | |
1MNX | FR3D | 546 | 214 | SOLUTION NMR | 1-14-03 | SPINACIA OLERACEA | THE SOLUTION STRUCTURE OF THE LOOP E REGION OF THE 5S RRNA FROM SPINACH CHLOROPLASTS. | P.VALLURUPALLI,P.B.MOORE | |
2OEU | FR3D | 59 | 24 | 2.0 | 2-20-07 | synthetic | FULL-LENGTH HAMMERHEAD RIBOZYME WITH MN(II) BOUND | M.MARTICK,W.G.SCOTT | 2GOZ |
3BNT | FR3D | 42 | 18 | 2.3 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF [CO(NH3)6]CL3 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | |
2AU4 | FR3D | 41 | 11 | SOLUTION NMR | 3-28-06 | synthetic | CLASS I GTP APTAMER | J.M.CAROTHERS,J.H.DAVIS,J.J.CHOU,J.W.SZOSTAK | |
1A51 | FR3D | 369 | 142 | SOLUTION NMR | 5-27-98 | ESCHERICHIA COLI | LOOP D/LOOP E ARM OF E. COLI 5S RRNA, NMR, 9 STRUCTURES | A.DALLAS,P.B.MOORE | |
2HUA | FR3D | 440 | 149 | SOLUTION NMR | 4-17-07 | synthetic | SOLUTION STRUCTURE OF CSFV IRES DOMAIN IIA | N.LOCKER,L.E.EASTON,P.J.LUKAVSKY | |
2D1A | FR3D | 78 | 38 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2D1B | FR3D | 78 | 40 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3P22 | FR3D | 190 | 104 | 2.5 | 12-08-10 | synthetic | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, IN COMPLEX WITH A9 RNA | R.M.MITTON-FRY,S.J.DEGREGORIO,J.WANG,T.A.STEITZ,J.A.STEITZ | |
1YKV | FR3D | 98 | 42 | 3.3 | 2-22-05 | synthetic | CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE | A.SERGANOV,S.KEIPER,L.MALININA,V.TERESHKO,E.SKRIPKIN, C.HOBARTNER,A.POLONSKAIA,A.T.PHAN,R.WOMBACHER,R.MICURA, Z.DAUTER,A.JASCHKE,D.J.PATEL | 1YLS 1YKQ |
1B36 | FR3D | 380 | 106 | SOLUTION NMR | 12-23-98 | SYNTHETIC CONSTRUCT | SOLUTION STRUCTURE OF THE HAIRPIN RIBOZYME LOOP B DOMAIN RNA, NMR, 10 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1U3K | FR3D | 380 | 141 | SOLUTION NMR | 7-12-05 | synthetic | THE SOLUTION STRUCTURE OF A SUBSTRATE OF ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES | E.C.POLLOCK,P.B.MOORE | 2A9L 1A9L |
2HW8 | FR3D | 36 | 17 | 2.1 | 12-19-06 | synthetic | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | S.TISHCHENKO,E.NIKONOVA,A.NIKULIN,N.NEVSKAYA,S.VOLCHKOV, W.PIENDL,M.GARBER,S.NIKONOV | 1ZHO |
2KU0 | FR3D | 380 | 145 | SOLUTION NMR | 4-28-10 | HEPATITIS C VIRUS | INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN IIA RNA | R.B.PAULSEN,P.P.SETH,E.E.SWAYZE,R.H.GRIFFEY,J.J.SKALICKY,T.E.CHEATHAM III,D.R.DAVIS | 2KTZ |
2ZY6 | FR3D | 38 | 12 | 1.8 | 6-30-09 | synthetic | CRYSTAL STRUCTURE OF A TRUNCATED TRNA, TPHE39A | I.TANAKA,M.YAO,Y.TANAKA,Y.KITAGO,S.YMAGATA | |
1M5L | FR3D | 570 | 227 | SOLUTION NMR | 9-18-02 | synthetic | STRUCTURE OF WILD-TYPE AND MUTANT INTERNAL LOOPS FROM THE SL-1 DOMAIN OF THE HIV-1 PACKAGING SIGNAL | J.GALLEGO,J.GREATOREX,G.VARANI,A.LEVER | |
2KHY | FR3D | 380 | 92 | SOLUTION NMR | 2-16-10 | synthetic | SPECIFIER DOMAIN OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG,T.M.HENKIN | |
1TXS | FR3D | 760 | 338 | SOLUTION NMR | 10-05-04 | synthetic | STEM-LOOP D OF THE CLOVERLEAF DOMAIN OF ENTEROVIRAL 5'UTR RNA | Z.DU,J.YU,N.B.ULYANOV,R.ANDINO,T.L.JAMES | |
1Q8N | FR3D | 950 | 345 | SOLUTION NMR | 3-23-04 | synthetic | SOLUTION STRUCTURE OF THE MALACHITE GREEN RNA BINDING APTAMER | J.FLINDERS,S.C.DEFINA,D.M.BRACKETT,C.BAUGH,C.WILSON, T.DIECKMANN | |
1I6U | FR3D | 74 | 37 | 2.6 | 8-03-01 | synthetic | RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | S.TISHCHENKO,A.NIKULIN,N.FOMENKOVA,N.NEVSKAYA,O.NIKONOV, P.DUMAS,H.MOINE,B.EHRESMANN,C.EHRESMANN,W.PIENDL,V.LAMZIN, M.GARBER,S.NIKONOV | |
1KOG | FR3D | 296 | 132 | 3.5 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE INTERACTING WITH THE ESSENTIAL DOMAIN OF ITS MRNA OPERATOR | A.TORRES-LARRIOS,A.C.DOCK-BREGEON,P.ROMBY,B.REES, R.SANKARANARAYANAN,J.CAILLET,M.SPRINGER,C.EHRESMANN, B.EHRESMANN,D.MORAS | |
2L1V | FR3D | 720 | 291 | SOLUTION NMR | 9-01-10 | synthetic | SOLUTION STRUCTURE OF A PREQ1 RIBOSWITCH (CLASS I) APTAMER BOUND TO PREQ1 | M.KANG,Q.ZHANG,J.FEIGON | |
3GS5 | FR3D | 61 | 28 | 2.8 | 4-21-09 | synthetic | AN ALL-RNA HAIRPIN RIBOZYME A38N1DA VARIANT WITH A PRODUCT MIMIC SUBSTRATE STRAND | R.C.SPITALE,R.VOLPINI,M.G.HELLER,J.KRUCINSKA,G.CRISTALLI, J.E.WEDEKIND | |
1E95 | FR3D | 540 | 174 | SOLUTION NMR | 8-23-01 | SIMIAN RETROVIRUS 1 | SOLUTION STRUCTURE OF THE PSEUDOKNOT OF SRV-1 RNA, INVOLVED IN RIBOSOMAL FRAMESHIFTING | P.J.A.MICHIELS,A.VERSLEYEN,C.W.A.PLEIJ,C.W.HILBERS,H.A.HEUS | |
1RAW | FR3D | 360 | 104 | SOLUTION NMR | 1-27-97 | synthetic | ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES | T.DIECKMANN,J.FEIGON | |
2TPK | FR3D | 36 | 13 | SOLUTION NMR | 11-04-98 | synthetic | AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS | J.A.HOLLAND,M.R.HANSEN,Z.DU,D.W.HOFFMAN | |
2FDT | FR3D | 396 | 164 | SOLUTION NMR | 12-05-06 | synthetic | SOLUTION STRUCTURE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2 | Y.NOMURA,S.BABA,S.NAKAZATO,T.SAKAMOTO,M.KAJIKAWA,N.OKADA, G.KAWAI | |
1KFO | FR3D | 36 | 16 | 1.6 | 12-07-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC- FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | S.LIMA,J.HILDENBRAND,A.KOROSTELEV,S.HATTMAN,H.LI | |
1N8X | FR3D | 720 | 320 | SOLUTION NMR | 4-08-03 | synthetic | SOLUTION STRUCTURE OF HIV-1 STEM LOOP SL1 | D.C.LAWRENCE,C.C.STOVER,J.NOZNITSKY,Z.WU,M.F.SUMMERS | |
2PCV | FR3D | 350 | 68 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
2DR8 | FR3D | 33 | 13 | 2.5 | 11-14-06 | synthetic | COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH TRNAMINIDC AND CTP | K.TOMITA,R.ISHITANI,S.FUKAI,O.NUREKI | 2DRB 2ZH5 1VFG 2ZH3 2ZH1 2DR5 2ZHA 2ZH7 2DVI 2DR9 2ZH4 2ZHB 2ZH9 2ZH2 2ZH8 2DR7 2ZH6 2DRA |
2XDB | FR3D | 35 | 12 | 2.5 | 1-12-11 | PECTOBACTERIUM ATROSEPTICUM | A PROCESSED NON-CODING RNA REGULATES A BACTERIAL ANTIVIRAL SYSTEM | T.R.BLOWER,X.Y.PEI,F.L.SHORT,P.C.FINERAN,D.P.HUMPHREYS,B.F.LUISI, G.P.C.SALMOND | 2XD0 2XDD |
3OVA | FR3D | 34 | 13 | 2.0 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE IN POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | 3OUY 3OVB 3OV7 3OVS |
2GM0 | FR3D | 700 | 266 | SOLUTION NMR | 4-25-06 | synthetic | LINEAR DIMER OF STEMLOOP SL1 FROM HIV-1 | N.B.ULYANOV,A.MUJEEB,Z.DU,M.TONELLI,T.G.PARSLOW,T.L.JAMES | |
1ET4 | FR3D | 175 | 75 | 2.3 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A | D.SUSSMAN,C.WILSON | 1DDY |
2PCW | FR3D | 833 | 274 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
3PLA | FR3D | 128 | 45 | 3.1 | 1-26-11 | synthetic | CRYSTAL STRUCTURE OF A CATALYTICALLY ACTIVE SUBSTRATE-BOUND BOX C/D RNP FROM SULFOLOBUS SOLFATARICUS | J.LIN,S.LAI,R.JIA,A.XU,L.ZHANG,J.LU,K.YE | |
1ULL | FR3D | 245 | 100 | SOLUTION NMR | 8-20-97 | synthetic | RNA APTAMER COMPLEXED WITH HIV-1 REV PEPTIDE, NMR, 7 STRUCTURES | X.YE,A.GORIN,A.D.ELLINGTON,D.J.PATEL | |
2L3E | FR3D | 700 | 260 | SOLUTION NMR | 11-17-10 | synthetic | SOLUTION STRUCTURE OF P2A-J2A/B-P2B OF HUMAN TELOMERASE RNA | Q.ZHANG,N.KIM,R.D.PETERSON,Z.WANG,J.FEIGON | |
1FMN | FR3D | 175 | 71 | SOLUTION NMR | 7-11-96 | synthetic | SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES | P.FAN,A.K.SURI,R.FIALA,D.LIVE,D.J.PATEL | |
2P89 | FR3D | 960 | 433 | SOLUTION NMR | 4-03-07 | synthetic | SOLUTION STRUCTURE OF THE 3' PSEUDOURIDYATION POCKET OF U65 SNORNA WITH BOUND SUBSTRATE | H.WU,J.FEIGON | |
2L3C | FR3D | 680 | 280 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | SOLUTION STRUCTURE OF ADAR2 DSRBM1 BOUND TO LSL RNA | F.ALLAIN,R.STEFL,F.OBERSTRASS | |
1ETF | FR3D | 34 | 14 | SOLUTION NMR | 3-12-97 | synthetic | REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, MINIMIZED AVERAGE STRUCTURE | J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY, A.D.FRANKEL,J.R.WILLAMSON | 1ETG 1I9F |
1P5N | FR3D | 680 | 253 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIB | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
1R2P | FR3D | 340 | 132 | SOLUTION NMR | 2-03-04 | synthetic | SOLUTION STRUCTURE OF DOMAIN 5 FROM THE AI5(GAMMA) GROUP II INTRON | R.K.O.SIGEL,D.G.SASHITAL,D.L.ABRAMOVITZ,A.G.PALMER III, S.E.BUTCHER,A.M.PYLE | |
2EUY | FR3D | 510 | 181 | SOLUTION NMR | 1-03-06 | synthetic | SOLUTION STRUCTURE OF THE INTERNAL LOOP OF HUMAN U65 H/ACA SNORNA 3' HAIRPIN | J.FEIGON,M.KHANNA,H.WU,C.JOHANSSON,M.CAIZERGUES-FERRER | |
1NBK | FR3D | 34 | 14 | SOLUTION NMR | 12-03-03 | synthetic | THE STRUCTURE OF RNA APTAMER FOR HIV TAT COMPLEXED WITH TWO ARGININAMIDE MOLECULES | A.MATSUGAMI,S.KOBAYASHI,K.OUHASHI,S.UESUGI,R.YAMAMOTO, K.TAIRA,S.NISHIKAWA,P.K.R.KUMAR,M.KATAHIRA | |
1RNK | FR3D | 34 | 12 | SOLUTION NMR | 2-27-95 | synthetic | THE STRUCTURE OF AN RNA PSEUDOKNOT THAT CAUSES EFFICIENT FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS | L.X.SHEN,I.TINOCO JUNIOR | |
1MJI | FR3D | 68 | 28 | 2.5 | 1-21-03 | ESCHERICHIA COLI | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | A.PEREDERINA,N.NEVSKAYA,O.NIKONOV,A.NIKULIN,P.DUMAS,M.YAO, I.TANAKA,M.GARBER,G.GONGADZE,S.NIKONOV | |
1R7W | FR3D | 680 | 227 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUCCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUCCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
1R7Z | FR3D | 680 | 209 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUUCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUUCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
2JTP | FR3D | 680 | 273 | SOLUTION NMR | 10-02-07 | synthetic | SOLUTION STRUCTURE OF THE FRAMESHIFT-INDUCING RNA STEM-LOOP IN SIV | R.J.MARCHESCHI,D.W.STAPLE,S.E.BUTCHER | |
2KPV | FR3D | 340 | 128 | SOLUTION NMR | 8-04-10 | synthetic | NMR MODEL OF THE FIRST LET-7 MIRNA COMPLEMENTARY SITE (LCS1) IN 3'-UTR OF LIN-41 MRNA FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
1T28 | FR3D | 34 | 7 | SOLUTION NMR | 8-10-04 | synthetic | HIGH RESOLUTION STRUCTURE OF A PICORNAVIRAL INTERNAL CIS- ACTING REPLICATION ELEMENT | V.THIVIYANATHAN,Y.YANG,K.KALUARACHCHI,R.REYNBRAND, D.G.GORENSTEIN,S.M.LEMON | |
1HMH | FR3D | 102 | 30 | 2.6 | 12-07-95 | engineered | THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME | H.W.PLEY,K.M.FLAHERTY,D.B.MCKAY | |
2F88 | FR3D | 340 | 140 | SOLUTION NMR | 2-28-06 | synthetic | SOLUTION NMR STRUCTURE OF DOMAIN 5 FROM THE PYAIELLA LITTORALIS (PL) GROUP II INTRON | K.T.DAYIE | |
1EXY | FR3D | 396 | 164 | SOLUTION NMR | 5-15-00 | synthetic | SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET | F.JIANG,A.GORIN,W.HU,A.MAJUMDAR,S.BASKERVILLE,W.XU, A.ELLINGTON,D.J.PATEL | |
1O15 | FR3D | 33 | 12 | SOLUTION NMR | 2-18-03 | synthetic | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS | G.M.CLORE,J.KUSZEWSKI | 1EHT |
2JXV | FR3D | 330 | 126 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF A LET-7 MIRNA:LIN-41 MRNA COMPLEX FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
1F1T | FR3D | 33 | 14 | 2.8 | 9-04-00 | synthetic | CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | C.BAUGH,D.GRATE,C.WILSON | |
3GCA | FR3D | 33 | 15 | 2.8 | 3-03-09 | synthetic | THE STRUCTURAL BASIS FOR RECOGNITION OF THE PREQ0 METABOLITE BY AN UNUSUALLY SMALL RIBOSWITCH APTAMER DOMAIN | R.C.SPITALE,J.E.WEDEKIND | |
2OZB | FR3D | 66 | 25 | 2.6 | 3-20-07 | synthetic | STRUCTURE OF A HUMAN PRP31-15.5K-U4 SNRNA COMPLEX | S.LIU,R.LUEHRMANN,M.C.WAHL | |
1G70 | FR3D | 448 | 170 | SOLUTION NMR | 2-07-01 | HUMAN IMMUNODEFICIENCY VIRUS 1 | COMPLEX OF HIV-1 RRE-IIB RNA WITH RSG-1.2 PEPTIDE | Y.GOSSER,T.HERMANN,A.MAJUMDAR,W.HU,R.FREDERICK,F.JIANG,W.XU, D.J.PATEL | |
1Z31 | FR3D | 320 | 110 | SOLUTION NMR | 3-22-05 | synthetic | THE STRUCTURE OF AN ENZYME-ACTIVATING FRAGMENT OF HUMAN TELOMERASE RNA | T.C.LEEPER,G.VARANI | |
1XHP | FR3D | 320 | 120 | SOLUTION NMR | 11-23-04 | synthetic | SOLUTION STRUCTURE OF THE EXTENDED U6 ISL AS OBSERVED IN THE U2/U6 COMPLEX FROM SACCHAROMYCES CEREVISIAE | D.G.SASHITAL,G.CORNILESCU,S.E.BUTCHER | |
3ID5 | FR3D | 64 | 16 | 4.0 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS C/D RNP ASSEMBLED WITH NOP5, FIBRILLARIN, L7AE AND A SPLIT HALF C/D RNA | K.YE | |
3DKN | FR3D | 69 | 30 | 8.7 | 8-19-08 | CANIS LUPUS FAMILIARIS | SEC61 IN THE CANINE RIBOSOME-CHANNEL COMPLEX FROM THE ENDOPLASMIC RETICULUM | J.-F.MENETRET,C.AKEY | |
3BO1 | FR3D | 105 | 32 | 9.6 | 12-09-08 | ESCHERICHIA COLI | RIBOSOME-SECY COMPLEX | C.W.AKEY,J.F.MENETRET | 3BO0 |
1KAJ | FR3D | 32 | 9 | SOLUTION NMR | 7-11-96 | synthetic | CONFORMATION OF AN RNA PSEUDOKNOT FROM MOUSE MAMMARY TUMOR VIRUS, NMR, 1 STRUCTURE | H.KANG,J.V.HINES,I.TINOCO JUNIOR | |
1KPD | FR3D | 32 | 10 | SOLUTION NMR | 4-01-97 | synthetic | A MUTANT RNA PSEUDOKNOT THAT PROMOTES RIBOSOMAL FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE | H.KANG,I.TINOCO JUNIOR | |
3CZW | FR3D | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M |
1T4L | FR3D | 480 | 210 | SOLUTION NMR | 6-01-04 | synthetic | SOLUTION STRUCTURE OF DOUBLE-STRANDED RNA BINDING DOMAIN OF S. CEREVISIAE RNASE III (RNT1P) IN COMPLEX WITH THE 5' TERMINAL RNA HAIRPIN OF SNR47 PRECURSOR | H.WU,A.HENRAS,G.CHANFREAU,J.FEIGON | |
1MFY | FR3D | 496 | 126 | SOLUTION NMR | 9-18-02 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER | M.-K.LEE,S.-H.BAE,C.-J.PARK,H.-K.CHEONG,C.CHEONG,B.-S.CHOI | |
1LVJ | FR3D | 372 | 134 | SOLUTION NMR | 12-11-02 | HUMAN IMMUNODEFICIENCY VIRUS 1 | STRUCTURE OF TAR RNA COMPLEXED WITH A TAT-TAR INTERACTION NANOMOLAR INHIBITOR THAT WAS IDENTIFIED BY COMPUTATIONAL SCREENING | Z.DU,K.E.LIND,T.L.JAMES | |
1YNC | FR3D | 620 | 210 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1YLG | FR3D | 620 | 227 | SOLUTION NMR | 2-01-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1YNE | FR3D | 620 | 219 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JBR | FR3D | 61 | 26 | 2.1 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31- MER SRD RNA INHIBITOR | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | 1JBT |
1YNG | FR3D | 496 | 163 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JO7 | FR3D | 992 | 289 | SOLUTION NMR | 9-19-01 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS PROMOTER | S.-H.BAE,H.-K.CHEONG,J.-H.LEE,C.CHEONG,M.KAINOSHO,B.-S.CHOI | |
3FU2 | FR3D | 93 | 48 | 2.9 | 3-03-09 | synthetic | COCRYSTAL STRUCTURE OF A CLASS-I PREQ1 RIBOSWITCH | D.J.KLEIN,T.E.EDWARDS,A.R.FERRE-D'AMARE | 3K1V |
1EBR | FR3D | 150 | 61 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1AUD | FR3D | 930 | 213 | SOLUTION NMR | 2-25-98 | synthetic | U1A-UTRRNA, NMR, 31 STRUCTURES | F.H.-T.ALLAIN,C.C.GUBSER,P.W.A.HOWE,K.NAGAI,D.NEUHAUS, G.VARANI | |
364D | FR3D | 59 | 24 | 3.0 | 1-02-98 | ESCHERICHIA COLI | .0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | 357D |
1EKZ | FR3D | 1080 | 459 | SOLUTION NMR | 8-21-00 | DROSOPHILA MELANOGASTER | NMR STRUCTURE OF THE COMPLEX BETWEEN THE THIRD DSRBD FROM DROSOPHILA STAUFEN AND A RNA HAIRPIN | A.RAMOS,S.GRUNERT,M.BYCROFT,D.ST JOHNSTON,G.VARANI | |
1HVU | FR3D | 120 | 36 | 4.8 | 1-13-99 | synthetic | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT | J.JAEGER,T.RESTLE,T.A.STEITZ | |
2IPY | FR3D | 60 | 24 | 2.8 | 1-09-07 | synthetic | CRYSTAL STRUCTURE OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH FERRITIN H IRE-RNA | W.E.WALDEN,A.I.SELEZNEVA,J.DUPUY,A.VOLBEDA,J.C.FONTECILLA- CAMPS,E.C.THEIL,K.VOLZ | |
2LDZ | FR3D | 30 | 10 | SOLUTION NMR | 2-23-99 | synthetic | SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, MINIMIZED AVERAGE STRUCTURE | C.G.HOOGSTRATEN,P.LEGAULT,A.PARDI | 1LDZ |
1NA2 | FR3D | 540 | 198 | SOLUTION NMR | 1-21-03 | synthetic | SOLUTION STRUCTURE OF THE P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,L.TRANTIREK,J.FEIGON | |
1RFR | FR3D | 600 | 259 | SOLUTION NMR | 3-23-04 | HUMAN COXSACKIEVIRUS B3 | NMR STRUCTURE OF THE 30MER STEMLOOP-D OF COXSACKIEVIRAL RNA | O.OHLENSCHLAGER,J.WOHNERT,E.BUCCI,S.SEITZ,S.HAFNER, R.RAMACHANDRAN,R.ZELL,M.GORLACH | |
1AJU | FR3D | 600 | 229 | SOLUTION NMR | 12-17-97 | synthetic | HIV-2 TAR-ARGININAMIDE COMPLEX, NMR, 20 STRUCTURES | A.S.BRODSKY,J.R.WILLIAMSON | |
1HWQ | FR3D | 600 | 220 | SOLUTION NMR | 5-16-01 | synthetic | SOLUTION STRUCTURE OF THE VS RIBOZYME SUBSTRATE STEM-LOOP | J.C.FLINDERS,T.DIECKMANN | |
1KP7 | FR3D | 30 | 10 | SOLUTION NMR | 4-10-02 | synthetic | CONSERVED RNA STRUCTURE WITHIN THE HCV IRES EIF3 BINDING SITE | J.GALLEGO,R.KLINCK,A.J.COLLIER,P.T.COLE,S.J.HARRIS, G.P.HARRISON,F.ABOUL-ELA,S.WALKER,G.VARANI | |
1AKX | FR3D | 30 | 12 | SOLUTION NMR | 11-19-97 | synthetic | HIV-2 TRANS ACTIVATING REGION RNA COMPLEX WITH ARGININAMIDE, NMR, MINIMIZED AVERAGE STRUCTURE | A.S.BRODSKY,J.R.WILLIAMSON | |
2BH2 | FR3D | 29 | 5 | 2.1 | 3-30-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE RUMA IN COMPLEX WITH RIBOSOMAL RNA SUBSTRATE AND S-ADENOSYLHOMOCYSTEINE. | T.T.LEE,S.AGARWALLA,R.M.STROUD | |
2K5Z | FR3D | 290 | 111 | SOLUTION NMR | 7-14-09 | synthetic | SOLUTION STRUCTURE AND DYNAMICS OF THE APICAL STEM-LOOP OF DUCK HEPATITIS B VIRUS | K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
2K64 | FR3D | 720 | 320 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING EBS1 TOGETHER WITH IBS1 OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1JID | FR3D | 26 | 10 | 1.8 | 10-19-01 | synthetic | HUMAN SRP19 IN COMPLEX WITH HELIX 6 OF HUMAN SRP RNA | K.WILD,I.SINNING,S.CUSACK | 1L1W |
3B91 | FR3D | 60 | 29 | 2.8 | 8-12-08 | synthetic | MINIMALLY HINGED HAIRPIN RIBOZYME INCORPORATES ADE38(2AP) AND 2',5'-PHOSPHODIESTER LINKAGE MUTATIONS AT THE ACTIVE SITE | C.MACELREVEY,J.KRUCINSKA,J.E.WEDEKIND | 3B5S 3B58 3I2R 3BBK 3BBI 3I2Q 3B5F 3CQS 3B5A 3BBM 3I2U 3CR1 3I2S |
1UUD | FR3D | 29 | 10 | SOLUTION NMR | 3-15-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 (CLONE | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT203, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
3B31 | FR3D | 43 | 16 | 2.4 | 12-25-07 | synthetic | CRYSTAL STRUCTURE OF DOMAIN III OF THE CRICKET PARALYSIS VIRUS IRES RNA | J.S.KIEFT,D.A.COSTANTINO,J.S.PFINGSTEN,R.P.RAMBO | 3MJA 3MJB 3MJ3 |
2GIP | FR3D | 560 | 260 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF A PORTION OF THE 5'UTR OF HSPA MRNA FROM BRADYRHIZOBIUM JANPONICUM HAVING DELETED G83 | S.CHOWDHURY,C.MARIS,F.H.ALLAIN,F.NARBERHAUS | 2GIO |
1UTS | FR3D | 464 | 150 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 | DESIGNED HIV-1 TAR BINDING LIGAND | B.DAVIS,A.I.H.MURCHIE,F.ABOUL-ELA,J.KARN | |
2L8H | FR3D | 290 | 102 | SOLUTION NMR | 3-23-11 | synthetic | CHEMICAL PROBE BOUND TO HIV TAR RNA | A.DAVIDSON,D.BEGLEY,C.LAU,G.VARANI | |
1ARJ | FR3D | 580 | 174 | SOLUTION NMR | 11-08-96 | synthetic | ARG-BOUND TAR RNA, NMR | F.ABOUL-ELA,G.VARANI,J.KARN | |
1ANR | FR3D | 580 | 151 | SOLUTION NMR | 1-11-97 | synthetic | CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES | F.ABOUL-ELA,G.VARANI,J.KARN | |
2KDQ | FR3D | 290 | 108 | SOLUTION NMR | 6-23-09 | synthetic | SIMULTANEOUS RECOGNITION OF HIV-1 TAR RNA BULGE AND LOOP SEQUENCES BY CYCLIC PEPTIDE MIMIC OF TAT PROTEIN | A.DAVIDSON,T.C.LEEPER,G.VARANI | |
2K63 | FR3D | 580 | 193 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING THE EXON BINDING SITE 1 (EBS1) OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1SCL | FR3D | 174 | 61 | SOLUTION NMR | 1-26-95 | RATTUS NORVEGICUS | THE SARCIN-RICIN LOOP, A MODULAR RNA | A.A.SZEWCZAK,P.B.MOORE | |
1EBS | FR3D | 145 | 62 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
2KX5 | FR3D | 290 | 110 | SOLUTION NMR | 7-07-10 | synthetic | RECOGNITION OF HIV TAR RNA BY PEPTIDE MIMETIC OF TAT PROTEIN | A.DAVIDSON,K.PATORA-KOMISARSKA,J.ROBINSON,G.VARANI | |
1UUI | FR3D | 29 | 11 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT158, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
1L1C | FR3D | 29 | 12 | SOLUTION NMR | 3-27-02 | BACILLUS SUBTILIS | STRUCTURE OF THE LICT BACTERIAL ANTITERMINATOR PROTEIN IN COMPLEX WITH ITS RNA TARGET | Y.YANG,N.DECLERCK,X.MANIVAL,S.AYMERICH,M.KOCHOYAN | |
1FQZ | FR3D | 27 | 12 | SOLUTION NMR | 1-17-01 | synthetic | NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE | R.KLINCK,E.WESTHOF,S.WALKER,M.AFSHAR,A.COLLIER,F.ABOUL-ELA | 1F84 |
1EBQ | FR3D | 145 | 65 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1NBR | FR3D | 435 | 168 | SOLUTION NMR | 3-04-03 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | S.A.MCCALLUM,A.PARDI | |
1QD3 | FR3D | 493 | 163 | SOLUTION NMR | 7-12-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | HIV-1 TAR RNA/NEOMYCIN B COMPLEX | C.FABER,H.STICHT,P.ROESCH | |
1OOA | FR3D | 58 | 18 | 2.5 | 7-22-03 | synthetic | CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH- AFFINITY RNA APTAMER | D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III, G.GHOSH | |
2JWV | FR3D | 290 | 100 | SOLUTION NMR | 1-08-08 | synthetic | STRUCTURE OF A HIGH AFFINITY ANTI-NFKB RNA APTAMER | N.J.REITER,L.MAHER III,S.E.BUTCHER | |
1AQO | FR3D | 435 | 148 | SOLUTION NMR | 2-04-98 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | K.J.ADDESS,A.PARDI | |
28SR | FR3D | 28 | 11 | SOLUTION NMR | 4-20-99 | ESCHERICHIA COLI | NMR STRUCTURE OF THE MOST CONSERVED RNA MOTIF IN SRP RNA | U.SCHMITZ,T.L.JAMES,P.LUKAVSKY,P.WALTER | 28SP |
1Q96 | FR3D | 81 | 37 | 1.8 | 11-25-03 | synthetic | CRYSTAL STRUCTURE OF A MUTANT OF THE SARCIN/RICIN DOMAIN FROM RAT 28S RRNA | C.C.CORRELL,J.BENEKEN,M.J.PLANTINGA,M.LUBBERS,Y.L.CHAN | 430D 1Q93 |
1BIV | FR3D | 140 | 56 | SOLUTION NMR | 12-23-96 | synthetic | BOVINE IMMUNODEFICIENCY VIRUS TAT-TAR COMPLEX, NMR, 5 STRUCTURES | X.YE,R.A.KUMAR,D.J.PATEL | |
2NUF | FR3D | 56 | 26 | 2.5 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 2.5-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
2EZ6 | FR3D | 56 | 26 | 2.0 | 2-07-06 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS RNASE III (D44N) COMPLEXED WITH PRODUCT OF DOUBLE-STRANDED RNA PROCESSING | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
3O7V | FR3D | 26 | 12 | 2.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END | Y.TIAN,D.K.SIMANSHU,J.-B.MA,D.J.PATEL | 3O3I 3O6E |
2A9X | FR3D | 280 | 119 | SOLUTION NMR | 11-01-05 | synthetic | TAR RNA RECOGNITION BY A CYCLIC PEPTIDOMIMETIC OF TAT PROTEIN | T.C.LEEPER,Z.ATHANASSIOU,R.L.DIAS,J.A.ROBINSON,G.VARANI | |
2KMJ | FR3D | 280 | 114 | SOLUTION NMR | 8-18-09 | HUMAN IMMUNODEFICIENCY VIRUS 2 | HIGH RESOLUTION NMR SOLUTION STRUCTURE OF A COMPLEX OF HIV-2 TAR RNA AND A SYNTHETIC TRIPEPTIDE IN A 1:2 STOICHIOMETRY | J.FERNER,M.SUHARTONO,S.BREITUNG,H.R.A.JONKER,M.HENNIG, J.WOEHNERT,M.GOEBEL,H.SCHWALBE | |
1ZBN | FR3D | 280 | 95 | SOLUTION NMR | 4-19-05 | synthetic | SOLUTION STRUCTURE OF BIV TAR HAIRPIN COMPLEXED TO JDV TAT ARGININE-RICH MOTIF | V.CALABRO,M.D.DAUGHERTY,A.D.FRANKEL | |
1MNB | FR3D | 28 | 12 | SOLUTION NMR | 1-27-97 | synthetic | BIV TAT PEPTIDE (RESIDUES 68-81), NMR, MINIMIZED AVERAGE STRUCTURE | J.D.PUGLISI,L.CHEN,S.BLANCHARD,A.D.FRANKEL | |
1XSG | FR3D | 27 | 12 | SOLUTION NMR | 12-28-04 | synthetic | SOLUTION STRUCTURE OF E.COLI RNASE P RNA P4 STEM OLIGORIBONUCLEOTIDE, U69A MUTATION | M.SCHMITZ | 1F7I 1F79 1XSU 1F7G 1F7F 1F7H 2CD6 1F6X 1XST 2CD5 1F6Z 2CD1 1XSH 2CD3 1F78 |
3DVZ | FR3D | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 1Q9A 480D 3DW6 483D 3DW4 3DW5 1MSY 3DW7 |
1D4R | FR3D | 81 | 22 | 2.0 | 12-02-99 | synthetic | -MER FRAGMENT OF HUMAN SRP RNA HELIX 6 | K.WILD,O.WEICHENRIEDER,G.A.LEONARD,S.CUSACK | |
2AP5 | FR3D | 27 | 13 | SOLUTION NMR | 9-05-06 | synthetic | SOLUTION STRUCTURE OF THE C27A SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, AVERAGE STRUCTURE | P.V.CORNISH,D.P.GIEDROC | |
1FYP | FR3D | 783 | 283 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX | S.R.LYNCH,J.D.PUGLISI | |
1L2X | FR3D | 27 | 14 | 1.2 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D |
1KPZ | FR3D | 27 | 10 | SOLUTION NMR | 1-11-02 | synthetic | PEMV-1 P1-P2 FRAMESHIFTING PSEUDOKNOT REGULARIZED AVERAGE STRUCTURE | P.L.NIXON,D.P.GIEDROC | |
2X7N | FR3D | 27 | 12 | 11.8 | 3-31-10 | SACCHAROMYCES CEREVISIAE | MECHANISM OF EIF6S ANTI-ASSOCIATION ACTIVITY | M.GARTMANN,M.BLAU,J.-P.ARMACHE,T.MIELKE,M.TOPF,R.BECKMANN | |
2AHT | FR3D | 540 | 219 | SOLUTION NMR | 10-17-06 | synthetic | SOLUTION STRUCTURE OF DOMAIN 6 FROM THE AI5(GAMMA)GROUP II INTRON | M.C.ERAT,O.ZERBE,T.FOX,R.K.O.SIGEL | |
2IXY | FR3D | 621 | 251 | SOLUTION NMR | 9-06-06 | HEPATITIS B VIRUS | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
1BYJ | FR3D | 1026 | 381 | SOLUTION NMR | 10-29-99 | synthetic | GENTAMICIN C1A A-SITE COMPLEX | S.YOSHIZAWA,D.FOURMY,J.D.PUGLISI | 1PBR |
2B63 | FR3D | 27 | 6 | 3.8 | 12-06-05 | synthetic | COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX | H.KETTENBERGER,A.EISENFUEHR,F.BRUECKNER,M.THEIS,M.FAMULOK, P.CRAMER | |
484D | FR3D | 594 | 219 | SOLUTION NMR | 10-14-99 | synthetic | SOLUTION STRUCTURE OF HIV-1 REV PEPTIDE-RNA APTAMER COMPLEX | X.YE,A.A.GORIN,R.FREDERICK,W.HU,A.MAJUMDAR,W.XU,G.MCLENDON, A.ELLINGTON,D.J.PATEL | |
1YSV | FR3D | 351 | 153 | SOLUTION NMR | 7-19-05 | synthetic | SOLUTION STRUCTURE OF THE CENTRAL REGION OF THE HUMAN GLUR- B R/G PRE-MRNA | R.STEFL,F.H.ALLAIN | |
1XOK | FR3D | 36 | 13 | 3.0 | 1-04-05 | synthetic | CRYSTAL STRUCTURE OF ALFALFA MOSAIC VIRUS RNA 3'UTR IN COMPLEX WITH COAT PROTEIN N TERMINAL PEPTIDE | L.M.GUOGAS,D.J.FILMAN,J.M.HOGLE,L.GEHRKE | |
1FYO | FR3D | 675 | 244 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA | S.R.LYNCH,J.D.PUGLISI | |
1TOB | FR3D | 189 | 76 | SOLUTION NMR | 6-16-97 | synthetic | SACCHARIDE-RNA RECOGNITION IN AN AMINOGLYCOSIDE ANTIBIOTIC- RNA APTAMER COMPLEX, NMR, 7 STRUCTURES | L.JIANG,A.K.SURI,R.FIALA,D.J.PATEL | |
1YG4 | FR3D | 27 | 12 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, REGULARIZED AVERAGE STRUCTURE | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1QWB | FR3D | 442 | 150 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCUTRE OF 5'-R(GGACACGAAAUCCCGAAGUAGUGUCC)-3' : AN RNA HAIRPIN CONTAINING THE IN VITRO SELECTED CONSENSUS SEQUENCE FOR NUCLEOLIN RBD12 | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
387D | FR3D | 26 | 5 | 3.1 | 8-26-03 | synthetic | RNA PSEUDOKNOT WITH 3D DOMAIN SWAPPING | S.E.LIETZKE,C.E.KUNDROT,C.L.BARNES | |
2A43 | FR3D | 26 | 13 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
413D | FR3D | 26 | 12 | 1.8 | 7-10-98 | synthetic | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | Y.TANAKA,S.FUJII,H.HIROAKI,T.SAKATA,T.TANAKA,S.UESUGI,K.- I.TOMITA,Y.KYOGOKU | |
2F8T | FR3D | 50 | 24 | 3.1 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
2RFK | FR3D | 61 | 24 | 2.9 | 2-05-08 | PYROCOCCUS FURIOSUS | SUBSTRATE RNA POSITIONING IN THE ARCHAEAL H/ACA RIBONUCLEOPROTEIN COMPLEX | B.LIANG,S.XUE,R.M.TERNS,M.P.TERNS,H.LI,SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) | 3HJY |
2RP1 | FR3D | 26 | 10 | SOLUTION NMR | 3-31-09 | synthetic | REFINED SOLUTION STRUCTURE OF THE PEMV-1 MRNA PSEUDOKNOT, REGULARIZED AVERAGE STRUCTURE | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
2L5Z | FR3D | 546 | 206 | SOLUTION NMR | 2-16-11 | NEUROSPORA | NMR STRUCTURE OF THE A730 LOOP OF THE NEUROSPORA VS RIBOZYME | G.DESJARDINS,E.BONNEAU,N.GIRARD,J.BOISBOUVIER,P.LEGAULT | |
1EI2 | FR3D | 425 | 119 | SOLUTION NMR | 3-06-00 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF THE RNA MAJOR GROOVE IN THE TAU EXON 10 SPLICING REGULATORY ELEMENT BY AMINOGLYCOSIDE ANTIBIOTICS | L.VARANI,M.G.SPILLANTINI,M GOEDERT,G.VARANI | |
488D | FR3D | 65 | 33 | 3.1 | 3-06-00 | synthetic | CATALYTIC RNA ENZYME-PRODUCT COMPLEX | J.B.MURRAY,H.SZOKE,A.SZOKE,W.G.SCOTT | 379D 1MME 1NYI 299D 301D 359D 1Q29 300D |
2KGP | FR3D | 250 | 90 | SOLUTION NMR | 6-02-09 | synthetic | STRUCTURAL BASIS FOR STABILIZATION OF THE TAU PRE-MRNA SPLICING REGULATORY ELEMENT BY NOVANTRONE (MITOXANTRONE) | S.ZHENG,Y.CHEN,C.P.DONAHUE,M.S.WOLFE,G.VARANI | |
2QUX | FR3D | 150 | 54 | 2.4 | 12-18-07 | PSEUDOMONAS PHAGE PP7 | PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN | J.A.CHAO | |
1M82 | FR3D | 775 | 287 | SOLUTION NMR | 6-03-03 | synthetic | SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS | C.-J.PARK,S.-H.BAE,M.-K.LEE,G.VARANI,B.-S.CHOI | |
1QC8 | FR3D | 725 | 206 | SOLUTION NMR | 8-31-99 | synthetic | NMR STRUCTURE OF TAU EXON 10 SPLICING REGULATORY ELEMENT RNA | L.VARANI,M.G.SPILLANTINI,A.KLUG,M.GOEDERT,G.VARANI | |
1KKS | FR3D | 360 | 105 | SOLUTION NMR | 3-13-02 | synthetic | STRUCTURE OF THE HISTONE MRNA HAIRPIN REQUIRED FOR CELL CYCLE REGULATION OF HISTONE GENE EXPRESSION | K.ZANIER,I.LUYTEN,C.CROMBIE,B MULLER,D.SCHUEMPERLI, J.P.LINGE,M.NILGES,M.SATTLER | |
2NOK | FR3D | 88 | 35 | 3.0 | 2-13-07 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOMAIN FROM HEPATITIS C VIRUS. | S.M.DIBROV,H.JOHNSTON-COS,Y.H.WENG | 2PN3 2PN4 |
1LC6 | FR3D | 960 | 329 | SOLUTION NMR | 5-29-02 | synthetic | SOLUTION STRUCTURE OF THE U6 INTRAMOLECULAR STEM-LOOP RNA | A.HUPPLER,L.J.NIKSTAD,A.M.ALLMANN,D.A.BROW,S.E.BUTCHER | |
283D | FR3D | 24 | 12 | 2.3 | 9-30-96 | engineered | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | K.J.BAEYENS,H.L.DE BONDT,A.PARDI,S.R.HOLBROOK | |
2HEM | FR3D | 216 | 90 | SOLUTION NMR | 9-12-06 | synthetic | NMR STRUCTURE AND MG2+ BINDING OF AN RNA SEGMENT THAT UNDERLIES THE L7/L12 STALK IN THE E.COLI 50S RIBOSOMAL SUBUNIT. | Q.ZHAO,U.NAGASWAMY,H.LEE,Y.XIA,X.GAO,G.FOX | |
2KF0 | FR3D | 240 | 96 | SOLUTION NMR | 7-21-09 | synthetic | NMR STRUCTURE OF U6 ISL AT PH 7.0 | V.VENDITTI,S.E.BUTCHER | 2KEZ 1SY4 |
1NYB | FR3D | 360 | 142 | SOLUTION NMR | 6-24-03 | ENTEROBACTERIA PHAGE PHI21 | SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX | C.D.CILLEY,J.R.WILLIAMSON | |
1MT4 | FR3D | 408 | 164 | SOLUTION NMR | 1-14-03 | synthetic | STRUCTURE OF 23S RIBOSOMAL RNA HAIRPIN 35 | I.LEBARS,S.YOSHIZAWA,A.R.STENHOLM,E.GUITTET,S.DOUTHWAITE, D.FOURMY | |
1SYZ | FR3D | 336 | 116 | SOLUTION NMR | 11-09-04 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA AT PH 5.7 | N.J.REITER,H.BLAD,F.ABILDGAARD,S.E.BUTCHER | |
255D | FR3D | 24 | 12 | 2.0 | 2-07-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | S.R.HOLBROOK,C.CHEONG,I.TINOCO JR,S.-H.KIM | |
2ANN | FR3D | 23 | 6 | 2.3 | 10-24-06 | synthetic | CRYSTAL STRUCTURE (I) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH 25 NT RNA HAIRPIN | L.MALININA,M.TEPLOVA,K.MUSUNURU,A.TEPLOV,J.C.DARNELL, S.K.BURLEY,R.B.DARNELL,D.J.PATEL | 2ANR |
1RHT | FR3D | 24 | 6 | SOLUTION NMR | 6-03-95 | synthetic | -MER RNA HAIRPIN COAT PROTEIN BINDING SITE FOR BACTERIOPHAGE R17 (NMR, MINIMIZED AVERAGE STRUCTURE) | P.N.BORER,Y.LIN,S.WANG,M.W.ROGGENBUCK,J.M.GOTT, O.C.UHLENBECK,I.PELCZER | |
2Q1R | FR3D | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | |
1NC0 | FR3D | 432 | 151 | SOLUTION NMR | 2-25-03 | synthetic | U80G U6 INTRAMOLECULAR STEM-LOOP RNA FROM SACCHAROMYCES CEREVISIAE | D.G.SASHITAL,A.M.ALLMANN,S.VAN DOREN,S.E.BUTCHER | |
1TFN | FR3D | 24 | 7 | SOLUTION NMR | 2-12-97 | synthetic | STRUCTURE REFINEMENT FOR A 24-NUCLEOTIDE RNA HAIRPIN, NMR, MINIMIZED AVERAGE STRUCTURE | D.J.KERWOOD,P.N.BORER | |
2F4X | FR3D | 864 | 360 | SOLUTION NMR | 2-28-06 | synthetic | NMR SOLUTION OF HIV-1 LAI KISSING COMPLEX | F.KIEKEN,F.PAQUET,F.BRULE,J.PAOLETTI,G.LANCELOT | |
1E4P | FR3D | 480 | 184 | SOLUTION NMR | 1-16-01 | NEUROSPORA SP. | STRUCTURE OF THE RIBOZYME SUBSTRATE HAIRPIN OF NEUROSPORA VS RNA. A CLOSE LOOK AT THE CLEAVAGE SITE | P.J.A.MICHIELS,C.H.J.SCHOUTEN,H.A.HEUS,C.W.HILBERS | |
2QH2 | FR3D | 480 | 180 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE CR7 TERMINAL HAIRPIN LOOP FROM HUMAN TELOMERASE RNA | J.FEIGON,C.A.THEIMER,N CHIM,K.E.BREECE | |
3A6P | FR3D | 92 | 44 | 2.9 | 12-08-09 | synthetic | CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP:PRE-MIRNA COMPLEX | C.OKADA,E.YAMASHITA,S.J.LEE,S.SHIBATA,J.KATAHIRA,A.NAKAGAWA, Y.YONEDA,T.TSUKIHARA | |
1A9N | FR3D | 48 | 12 | 2.4 | 9-23-98 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA | S.R.PRICE,P.R.EVANS,K.NAGAI | |
1NLC | FR3D | 46 | 22 | 1.9 | 5-13-03 | synthetic | HIV-1 DIS(MAL) DUPLEX ZN-SOAKED | E.ENNIFAR,P.WALTER,P.DUMAS | 1Y73 1WVD 1Y6T 3C44 1Y6S 462D 3DVV 1Y95 1O3Z 1Y90 1Y99 |
2OIY | FR3D | 46 | 20 | 1.6 | 12-25-07 | synthetic | CRYSTAL STRUCTURE OF THE DUPLEX FORM OF THE HIV-1(LAI) RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.WALTER,P.DUMAS | 2OJ0 2OIJ 3FAR |
1XPF | FR3D | 46 | 20 | 2.3 | 10-18-05 | synthetic | HIV-1 SUBTYPE A GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 1YXP 2FD0 2FCY 1ZCI 1Y3S 1Y3O 2FCX 1XP7 2FCZ 1K9W 2B8S |
2FRL | FR3D | 460 | 159 | SOLUTION NMR | 2-14-06 | synthetic | SOLUTION STRUCTURE OF THE HELIX II TEMPLATE BOUNDARY ELEMENT FROM TETRAHYMENA TELOMERASE RNA | R.J.RICHARDS,C.A.THEIMER,L.D.FINGER,J.FEIGON | |
1BGZ | FR3D | 138 | 47 | SOLUTION NMR | 1-13-99 | synthetic | S8 RRNA BINDING SITE FROM E. COLI, NMR, 6 STRUCTURES | K.KALURACHCHI,E.P.NIKONOWICZ | |
2PJP | FR3D | 23 | 10 | 2.3 | 10-30-07 | ESCHERICHIA COLI | STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA | N.SOLER,D.FOURMY,S.YOSHIZAWA | |
1OW9 | FR3D | 253 | 99 | SOLUTION NMR | 5-20-03 | synthetic | NMR STRUCTURE OF THE ACTIVE CONFORMATION OF THE VS RIBOZYME CLEAVAGE SITE | B.HOFFMANN,G.T.MITCHELL,P.GENDRON,F.MAJOR,A.A.ANDERSEN, R.A.COLLINS,P.LEGAULT | |
2QEK | FR3D | 46 | 20 | 1.8 | 5-06-08 | synthetic | HIV-1 SUBTYPE F DIS RNA EXTENDED DUPLEX FORM | S.FREISZ,E.ENNIFAR,P.DUMAS | |
2ES5 | FR3D | 460 | 200 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SRE RNA | F.H.T.ALLAIN | 2B6G 2ESE |
1JTJ | FR3D | 437 | 132 | SOLUTION NMR | 12-11-02 | synthetic | SOLUTION STRUCTURE OF HIV-1LAI MUTATED SL1 HAIRPIN | F.KIEKEN,E.ARNOULT,F.BARBAULT,F.PAQUET,T.HUYNH-DINH, J.PAOLETTI,D.GENEST,G.LANCELOT | |
1K5I | FR3D | 230 | 91 | SOLUTION NMR | 10-17-01 | synthetic | NMR STRUCTURE OF A RIBOSOMAL RNA HAIRPIN CONTAINING A CONSERVED CUCAA PENTALOOP | U.NAGASWAMY,X.GAO,S.A.MARTINIS,G.E.FOX | |
2PLY | FR3D | 46 | 20 | 2.6 | 11-06-07 | MOORELLA THERMOACETICA | STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA. | N.SOLER,D.FOURMY,S.YOSHIZAWA | 1WSU 2UWM |
1BVJ | FR3D | 483 | 181 | SOLUTION NMR | 12-09-98 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | HIV-1 RNA A-RICH HAIRPIN LOOP | E.V.PUGLISI,J.D.PUGLISI | |
3PHP | FR3D | 230 | 80 | SOLUTION NMR | 10-21-98 | synthetic | STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
1MWL | FR3D | 42 | 18 | 2.4 | 2-18-03 | synthetic | CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE | Q.VICENS,E.WESTHOF | 2ESJ 2G5Q 1J7T 2ET4 1YRJ 2BEE 2ET5 1LC4 2ESI 2PWT 2BE0 2F4T 2ET3 |
2QH3 | FR3D | 460 | 160 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U64 H/ACA SNORNA 3' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1S2F | FR3D | 23 | 9 | SOLUTION NMR | 8-31-04 | synthetic | AVERAGE SOLUTION STRUCTURE OF A PSEUDO-5'-SPLICE SITE FROM THE NEGATIVE REGULATOR OF SPLICING OF ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1XPE | FR3D | 46 | 20 | 1.9 | 10-18-05 | synthetic | HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 2B8R |
1S34 | FR3D | 345 | 135 | SOLUTION NMR | 8-31-04 | synthetic | SOLUTION STRUCTURE OF RESIDUES 907-929 FROM ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1JU1 | FR3D | 690 | 292 | SOLUTION NMR | 8-23-02 | synthetic | DIMER INITIATION SEQUENCE OF HIV-1LAI GENOMIC RNA: NMR SOLUTION STRUCTURE OF THE EXTENDED DUPLEX | F.GIRARD,F.BARBAULT,G.LANCELOT | |
1TLR | FR3D | 460 | 149 | SOLUTION NMR | 11-12-97 | synthetic | SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1NEM | FR3D | 207 | 88 | SOLUTION NMR | 8-31-99 | synthetic | SACCHARIDE-RNA RECOGNITION IN THE NEOMYCIN B / RNA APTAMER COMPLEX | L.JIANG,A.MAJUMDAR,W.HU,T.J.JAISHREE,W.XU,D.J.PATEL | |
1BAU | FR3D | 46 | 18 | SOLUTION NMR | 4-27-99 | synthetic | NMR STRUCTURE OF THE DIMER INITIATION COMPLEX OF HIV-1 GENOMIC RNA, MINIMIZED AVERAGE STRUCTURE | A.MUJEEB,J.L.CLEVER,T.M.BILLECI,T.L.JAMES,T.G.PARSLOW | |
2RO2 | FR3D | 23 | 9 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN I OF THE NEGATIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,S.GAGO,M.DE LA PENA,R.FLORES | |
1MFK | FR3D | 460 | 179 | SOLUTION NMR | 11-13-02 | synthetic | STRUCTURE OF PROKARYOTIC SECIS MRNA HAIRPIN | D.FOURMY,E.GUITTET,S.YOSHIZAWA | |
3BNL | FR3D | 44 | 21 | 2.6 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING A SITE IN THE PRESENCE OF [CO(NH3)6]CL3 | J.KONDO,E.WESTHOF | |
1YG3 | FR3D | 540 | 198 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, 20 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1IKD | FR3D | 660 | 206 | SOLUTION NMR | 4-01-97 | synthetic | ACCEPTOR STEM, NMR, 30 STRUCTURES | A.RAMOS,G.VARANI | |
2AP0 | FR3D | 540 | 230 | SOLUTION NMR | 9-05-06 | synthetic | SOLUTION STRUCTURE OF THE C27A SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, 20 LOWEST ENERGY STRUCTURES | P.V.CORNISH,D.P.GIEDROC | |
2FQN | FR3D | 43 | 18 | 2.3 | 2-14-06 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE | J.KONDO,A.URZHUMTSEV,E.WESTHOF | 2G5K 2O3W 2O3Y |
3HTX | FR3D | 88 | 40 | 3.1 | 9-29-09 | synthetic | CRYSTAL STRUCTURE OF SMALL RNA METHYLTRANSFERASE HEN1 | Y.HUANG,L.-J.JI,Q.-C.HUANG,D.G.VASSYLYEV,X.-M.CHEN,J.-B.MA | |
3BNP | FR3D | 43 | 16 | 2.7 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE (A1555G MUTANT) | J.KONDO,E.WESTHOF | 3BNN 3BNO |
3BNQ | FR3D | 86 | 32 | 2.0 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF SRCL2 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNR 3BNS |
2JSE | FR3D | 220 | 80 | SOLUTION NMR | 11-20-07 | synthetic | NMR REVEALS ABSENCE OF HYDROGEN BONDING IN ADJACENT UU AND AG MISMATCHES IN AN ISOLATED INTERNAL LOOP FROM RIBOSOMAL RNA. | N.SHANKAR | |
1PJY | FR3D | 440 | 195 | SOLUTION NMR | 8-05-03 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING STEM- LOOP RNA | D.W.STAPLE,S.E.BUTCHER | |
2JYM | FR3D | 330 | 135 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF STEM-LOOP ALPHA OF THE HEPATITIS B VIRUS POST-TRANSCRIPTIONAL REGULATORY ELEMENT | O.OHLENSCHLAGER,M.GORLACH,M.SCHWALBE | |
1JUR | FR3D | 198 | 76 | SOLUTION NMR | 1-16-02 | synthetic | SOLUTION STRUCTURE OF HELIX III IN XENOPUS OOCYTE 5S RRNA. | P.W.HUBER,J.P.RIFE,P.B.MOORE | |
1K6G | FR3D | 440 | 183 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
2F8S | FR3D | 44 | 18 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
1F9L | FR3D | 22 | 9 | SOLUTION NMR | 7-26-00 | synthetic | SOLUTION STRUCTURE OF A 22-NUCLEOTIDE HAIRPIN SIMILAR TO THE P5ABC REGION OF A GROUP I RIBOZYME WITH COBALT(III) HEXAMMINE COMPLEXED TO THE GAAA TETRALOOP | S.RUDISSER,I.TINOCO JR. | |
1DZ5 | FR3D | 572 | 182 | SOLUTION NMR | 3-29-00 | HOMO SAPIENS | THE NMR STRUCTURE OF THE 38KDA U1A PROTEIN-PIE RNA COMPLEX REVEALS THE BASIS OF COOPERATIVITY IN REGULATION OF POLYADENYLATION BY HUMAN U1A PROTEIN | L.VARANI,S.I.GUNDERSON,I.W.MATTAJ,L.E.KAY,D.NEUHAUS,G.VARANI | |
3FTF | FR3D | 44 | 20 | 2.8 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF A. AEOLICUS KSGA IN COMPLEX WITH RNA AND SAH | C.TU,X.JI | 3FTE |
2GV3 | FR3D | 440 | 163 | SOLUTION NMR | 8-08-06 | synthetic | TRANSLOCATION OF A TRNA WITH AN EXTENDED ANTICODON THROUGH THE RIBOSOME | S.S.PHELPS,C.GAUDIN,S.YOSHIZAWA,C.BENITEZ,D.FOURMY,S.JOSEPH | |
1FJE | FR3D | 418 | 148 | SOLUTION NMR | 1-03-01 | synthetic | SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA | F.H.T.ALLAIN,P.BOUVET,T.DIECKMANN,J.FEIGON | |
1TJZ | FR3D | 440 | 166 | SOLUTION NMR | 9-28-04 | synthetic | SOLUTION STRUCTURE OF THE ACTIVE SITE STEM-LOOP OF THE VS RIBOZYME | J.FLINDERS,T.DIECKMANN | |
1IE1 | FR3D | 396 | 125 | SOLUTION NMR | 6-20-01 | synthetic | NMR SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY HAMSTER NUCLEOLIN RBD12. | P.BOUVET,F.H-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
2GRW | FR3D | 264 | 91 | SOLUTION NMR | 3-06-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | |
1NTB | FR3D | 40 | 15 | 2.9 | 5-13-03 | synthetic | .9 A CRYSTAL STRUCTURE OF STREPTOMYCIN RNA-APTAMER COMPLEX | V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 1NTA |
2GV4 | FR3D | 286 | 119 | SOLUTION NMR | 3-20-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | 1N66 |
2JUK | FR3D | 440 | 179 | SOLUTION NMR | 11-20-07 | synthetic | GUANIDINO NEOMYCIN B RECOGNITION OF AN HIV-1 RNA HELIX | D.W.STAPLE,V.VENDITTI,N.NICCOLAI,L.ELSON-SCHWAB,Y.TOR, S.E.BUTCHER | |
2K66 | FR3D | 440 | 200 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-STEM CLOSED BY A GAAA TETRALOOP OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
2G1W | FR3D | 330 | 108 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF THE AQUIFEX AEOLICUS TMRNA PSEUDOKNOT PK1 | S.NONIN-LECOMTE,F.DARDEL | |
3MEI | FR3D | 44 | 19 | 2.0 | 1-26-11 | synthetic | REGULATORY MOTIF FROM THE THYMIDYLATE SYNTHASE MRNA | S.DIBROV,J.MCLEAN,T.HERMANN | |
3LOA | FR3D | 42 | 15 | 2.3 | 8-04-10 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA CONSTRUCT WITH TWO ADJACENT LIGAND BINDING SITES OF HELIX H44 IN 16S RIBOSOMAL RNA | S.DIBROV | |
1OSW | FR3D | 506 | 181 | SOLUTION NMR | 5-20-03 | synthetic | THE STEM OF SL1 RNA IN HIV-1: STRUCTURE AND NUCLEOCAPSID PROTEIN BINDING FOR A 1X3 INTERNAL LOOP | Y.YUAN,D.J.KERWOOD,A.C.PAOLETTI,M.F.SHUBSDA,P.N.BORER | |
1K6H | FR3D | 440 | 189 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
2W2H | FR3D | 22 | 3 | 3.2 | 12-09-08 | EQUINE INFECTIOUS ANEMIA VIRUS | STRUCTURAL BASIS OF TRANSCRIPTION ACTIVATION BY THE CYCLIN T1-TAT-TAR RNA COMPLEX FROM EIAV | K.ANAND,M.GEYER | |
1K2G | FR3D | 22 | 8 | SOLUTION NMR | 5-08-02 | synthetic | STRUCTURAL BASIS FOR THE 3'-TERMINAL GUANOSINE RECOGNITION BY THE GROUP I INTRON | Y.KITAMURA,Y.MUTO,S.WATANABE,I.KIM,T.ITO,Y.NISHIYA, K.SAKAMOTO,T.OHTSUKI,G.KAWAI,K.WATANABE,K.HOSONO,H.TAKAKU, E.KATOH,T.YAMAZAKI,T.INOUE,S.YOKOYAMA | |
2O3V | FR3D | 43 | 17 | 2.8 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB33 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | |
1RLG | FR3D | 44 | 18 | 2.7 | 6-01-04 | synthetic | MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO- CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX | T.MOORE,Y.ZHANG,M.O.FENLEY,H.LI | |
2HNS | FR3D | 440 | 180 | SOLUTION NMR | 10-31-06 | synthetic | STRUCTURE OF THE AAGU TETRALOOP | C.GAUDIN,F.FOURMY,S.YOSHIZAWA | |
2KD8 | FR3D | 264 | 108 | SOLUTION NMR | 1-19-10 | synthetic | SOLUTION STRUCTURE OF THE STEM-LOOP IIID OF GBV-B IRES | V.THIVIYANATHAN,R.KULASEGRAN SHYLINI,D.G.GORENSTEIN, K.KALUARACHCHI | |
1IE2 | FR3D | 462 | 156 | SOLUTION NMR | 6-20-01 | synthetic | SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY RBD12 OF HAMSTER NUCLEOLIN.SNRE (ANTI) | P.BOUVET,F.H.-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
1O9M | FR3D | 42 | 17 | 2.4 | 3-27-03 | ESCHERICHIA COLI | THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY. | R.RUSSELL,J.B.MURRAY | 2F4U 2ET8 |
1FEU | FR3D | 80 | 32 | 2.3 | 6-25-01 | synthetic | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | R.V.FEDOROV,V.A.MESHCHERYAKOV,G.M.GONGADZE,N.P.FOMENKOVA, N.A.NEVSKAYA,M.SELMER,M.LAURBERG,O.KRISTENSEN,S.AL- KARADAGHI,A.LILJAS,M.B.GARBER,S.V.NIKONOV | |
1JP0 | FR3D | 588 | 196 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITHOUT RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
2O3X | FR3D | 42 | 17 | 2.9 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE PROKARYOTIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB30 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | 2F4S |
1URN | FR3D | 55 | 13 | 1.9 | 3-08-96 | synthetic | U1A MUTANT/RNA COMPLEX + GLYCEROL | C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI | |
1SZY | FR3D | 21 | 7 | SOLUTION NMR | 4-20-04 | synthetic | SOLUTION STRUCTURE OF ITALY1 ("INITIATOR TRNA ANTICODON LOOP FROM YEAST"), AN UNMODIFIED 21-NT RNA WITH THE SEQUENCE OF THE ANTICODON STEM-LOOP OF YEAST INITIATOR TRNA | D.C.SCHWEISGUTH,P.B.MOORE | |
1ZE2 | FR3D | 42 | 16 | 3.0 | 4-26-05 | synthetic | CONFORMATIONAL CHANGE OF PSEUDOURIDINE 55 SYNTHASE UPON ITS ASSOCIATION WITH RNA SUBSTRATE | K.PHANNACHET,R.H.HUANG | 2AB4 |
1QWA | FR3D | 357 | 144 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCTURE OF 5'-R(GGAUGCCUCCCGAGUGCAUCC): AN RNA HAIRPIN DERIVED FROM THE MOUSE 5'ETS THAT BINDS NUCLEOLIN RBD12. | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
1K8W | FR3D | 21 | 8 | 1.9 | 12-31-01 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI PSEUDOURIDINE SYNTHASE TRUB BOUND TO A T STEM-LOOP RNA | C.HOANG,A.R.FERRE-D'AMARE | 1ZL3 |
17RA | FR3D | 252 | 86 | SOLUTION NMR | 4-20-99 | synthetic | BRANCHPOINT HELIX FROM YEAST AND BINDING SITE FOR PHAGE GA/MS2 COAT PROTEINS, NMR, 12 STRUCTURES | E.P.NIKONOWICZ,J.S.SMITH | |
1A4D | FR3D | 41 | 15 | SOLUTION NMR | 4-29-98 | ESCHERICHIA COLI | LOOP D/LOOP E ARM OF ESCHERICHIA COLI 5S RRNA, NMR, MINIMIZED AVERAGE STRUCTURE | A.DALLAS,P.B.MOORE | |
2H2X | FR3D | 420 | 143 | SOLUTION NMR | 10-03-06 | synthetic | SOLUTION STRUCTURE OF THE TETRAHYMENA TELOMERASE RNA STEM IV TERMINAL LOOP | R.J.RICHARDS,H.WU,L.TRANTIREK,C.M.O'CONNOR,K.COLLINS, J.FEIGON | |
1JOX | FR3D | 504 | 167 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITH RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
2ZKO | FR3D | 42 | 18 | 1.7 | 10-14-08 | INFLUENZA A VIRUS | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUMAN INFLUENZA VIRUS A | Y.A.YUAN | |
2BJ2 | FR3D | 40 | 20 | SOLUTION NMR | 2-02-99 | synthetic | RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE | A.J.LEE,D.M.CROTHERS | 1BJ2 |
2FY1 | FR3D | 357 | 136 | SOLUTION NMR | 2-06-07 | HOMO SAPIENS | A DUAL MODE OF RNA RECOGNITION BY THE RBMY PROTEIN | L.SKRISOVSKA,C.BOURGOIS,R.STEFL,L.KISTER,P.WENTER,D.ELLIOT, J.STEVENIN,F.H.T.ALLAIN | |
1RPU | FR3D | 42 | 19 | 2.5 | 1-13-04 | synthetic | CRYSTAL STRUCTURE OF CIRV P19 BOUND TO SIRNA | J.M.VARGASON,G.SZITTYA,J.BURGYAN,T.M.T.HALL | |
1D0U | FR3D | 483 | 184 | SOLUTION NMR | 5-24-00 | synthetic | SOLUTION STRUCTURE OF AN RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN | J.S.SMITH,E.P.NIKONOWICZ | |
1RKJ | FR3D | 294 | 98 | SOLUTION NMR | 4-27-04 | MESOCRICETUS AURATUS | SOLUTION STRUCTURE OF THE COMPLEX FORMED BY THE TWO N- TERMINAL RNA-BINDING DOMAINS OF NUCLEOLIN AND A PRE-RRNA TARGET | C.JOHANSSON,L.D.FINGER,L.TRANTIREK,T.D.MUELLER,S.KIM, I.A.LAIRD-OFFRINGA,J.FEIGON | |
1KPY | FR3D | 405 | 133 | SOLUTION NMR | 1-11-02 | synthetic | PEMV-1 P1-P2 FRAMESHIFTING PSEUDOKNOT, 15 LOWEST ENERGY STRUCTURES | P.L.NIXON,D.P.GIEDROC | |
3DH3 | FR3D | 84 | 26 | 3.0 | 4-28-09 | synthetic | CRYSTAL STRUCTURE OF RLUF IN COMPLEX WITH A 22 NUCLEOTIDE RNA SUBSTRATE | A.ALIAN,A.DEGIOVANNI,R.M.STROUD,J.S.FINER-MOORE | |
2RPK | FR3D | 20 | 7 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN II OF THE POSITIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,M.DE LA PENA,S.GAGO,R.FLORES | |
2TOB | FR3D | 260 | 90 | SOLUTION NMR | 6-22-99 | synthetic | SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES | L.JIANG,D.J.PATEL | |
1BN0 | FR3D | 220 | 83 | SOLUTION NMR | 4-27-99 | synthetic | SL3 HAIRPIN FROM THE PACKAGING SIGNAL OF HIV-1, NMR, 11 STRUCTURES | L.PAPPALARDO,D.J.KERWOOD,I.PELCZER,P.N.BORER | |
1HLX | FR3D | 400 | 154 | SOLUTION NMR | 9-15-95 | synthetic | P1 HELIX NUCLEIC ACIDS (DNA/RNA) RIBONUCLEIC ACID | F.H.-T.ALLAIN,G.VARANI | |
2RPT | FR3D | 200 | 78 | SOLUTION NMR | 8-25-09 | synthetic | STRUCTURE OF THE CC MISMATCH FROM THE THYMIDYLATE SYNTHASE BINDING SITE 1 HAIRPIN AND ANALYSIS OF ITS INTERACTION WITH PAROMOMYCIN | T.J.TAVARES,P.E.JOHNSON | |
2RP0 | FR3D | 728 | 294 | SOLUTION NMR | 3-31-09 | synthetic | REFINED SOLUTION STRUCTURE OF THE PEMV-1 MRNA PSEUDOKNOT, 28 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1U2A | FR3D | 20 | 8 | SOLUTION NMR | 3-04-98 | SACCHAROMYCES CEREVISIAE | STEM LOOP IIA FROM U2SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE | S.C.STALLINGS,P.B.MOORE | 2U2A |
1A1T | FR3D | 500 | 198 | SOLUTION NMR | 6-17-98 | synthetic | STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO THE SL3 PSI-RNA RECOGNITION ELEMENT, NMR, 25 STRUCTURES | R.N.DE GUZMAN,Z.R.WU,C.C.STALLING,L.PAPPALARDO,P.N.BORER, M.F.SUMMERS | |
2O33 | FR3D | 400 | 159 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM S. CEREVISIAE | D.G.SASHITAL,V.VENDITTI,C.A.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
361D | FR3D | 40 | 9 | 3.0 | 7-01-98 | synthetic | CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP | M.PERBANDT,A.NOLTE,S.LORENZ,V.A.ERDMANN,C.BETZEL | |
1EC6 | FR3D | 40 | 9 | 2.4 | 2-21-00 | synthetic | CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN | H.A.LEWIS,K.MUSUNURU,K.B.JENSEN,C.EDO,H.CHEN | |
2I82 | FR3D | 79 | 28 | 2.0 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE | C.HOANG | |
1MFJ | FR3D | 200 | 76 | SOLUTION NMR | 11-06-02 | synthetic | ' STEM-LOOP FROM HUMAN U4 SNRNA | L.R.COMOLLI,N.B.ULYANOV,T.L.JAMES,W.H.GMEINER | |
3NJ6 | FR3D | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2JPP | FR3D | 400 | 140 | SOLUTION NMR | 8-21-07 | PSEUDOMONAS FLUORESCENS | STRUCTURAL BASIS OF RSMA/CSRA RNA RECOGNITION: STRUCTURE OF RSME BOUND TO THE SHINE-DALGARNO SEQUENCE OF HCNA MRNA | M.SCHUBERT,K.LAPOUGE,O.DUSS,F.C.OBERSTRASS,I.JELESAROV, D.HAAS,F.H.-T.ALLAIN | |
2P7E | FR3D | 60 | 28 | 2.0 | 5-22-07 | synthetic | VANADATE AT THE ACTIVE SITE OF A SMALL RIBOZYME SUGGESTS A ROLE FOR WATER IN TRANSITION-STATE STABILIZATION | A.T.TORELLI,J.KRUCINSKA,J.E.WEDEKIND | 3GS8 2P7D 1ZFX 3GS1 2OUE 1X9K 2D2K 2FGP 1X9C 2P7F 2NPZ 2BCZ 1ZFT 2NPY 2BCY 1ZFV |
1I3X | FR3D | 285 | 117 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA | S.C.BLANCHARD,J.D.PUGLISI | |
1ESY | FR3D | 380 | 135 | SOLUTION NMR | 5-31-00 | synthetic | NMR STRUCTURE OF STEM LOOP SL2 OF THE HIV-1 PSI RNA PACKAGING SIGNAL REVEALS A NOVEL A-U-A BASE-TRIPLE PLATFORM | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,M.F.SUMMERS | |
1SLO | FR3D | 19 | 7 | SOLUTION NMR | 12-07-96 | CAENORHABDITIS ELEGANS | FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS, NMR, MINIMIZED AVERAGE STRUCTURE | N.L.GREENBAUM,I.RADHAKRISHNAN,D.J.PATEL,D.HIRSH | 1SLP |
2ZI0 | FR3D | 38 | 18 | 2.8 | 7-22-08 | synthetic | CRYSTAL STRUCTURE OF TAV2B/SIRNA COMPLEX | Y.A.YUAN,H.-Y.CHEN | |
1QC0 | FR3D | 57 | 28 | 1.6 | 11-11-99 | synthetic | CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
1DFU | FR3D | 38 | 15 | 1.8 | 12-02-99 | synthetic | CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION | M.LU,T.A.STEITZ | |
2C4Z | FR3D | 26 | 10 | 2.6 | 1-05-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (2SU -5-6) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 2B2E 2IZM 1AQ4 2B2G 2C4Y 2C51 2BQ5 2BU1 2BNY 1ZDH 1AQ3 2IZ8 2C4Q 1ZDK 2C50 2IZ9 1ZDI |
2B7G | FR3D | 190 | 70 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SMAUG RECOGNITION RNA ELEMENT | P.E.JOHNSON,L.W.DONALDSON | |
1F27 | FR3D | 30 | 14 | 1.3 | 6-12-00 | synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
2XEB | FR3D | 330 | 132 | SOLUTION NMR | 5-26-10 | HOMO SAPIENS | NMR STRUCTURE OF THE PROTEIN-UNBOUND SPLICEOSOMAL U4 SNRNA 5' STEM LOOP | M.FALB,I.AMATA,F.GABEL,B.SIMON,T.CARLOMAGNO | |
1Q2R | FR3D | 38 | 13 | 2.9 | 9-09-03 | synthetic | CHEMICAL TRAPPING AND CRYSTAL STRUCTURE OF A CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE COVALENT INTERMEDIATE | W.XIE,X.LIU,R.H.HUANG | 1Q2S |
2RLU | FR3D | 190 | 70 | SOLUTION NMR | 2-26-08 | synthetic | THE THREE DIMENSIONAL STRUCTURE OF THE MOORELLA THERMOACETICA SELENOCYSTEINE INSERTION SEQUENCE RNA HAIRPIN AND ITS INTERACTION WITH THE ELONGATION FACTOR SELB | A.V.BERIBISKY,T.J.TAVARES,A.N.AMBORSKI,M.MOTAMED, A.E.JOHNSON,T.L.MARK,P.E.JOHNSON | |
1UUU | FR3D | 285 | 93 | SOLUTION NMR | 2-25-98 | synthetic | STRUCTURE OF AN RNA HAIRPIN LOOP WITH A 5'-CGUUUCG-3' LOOP MOTIF BY HETERONUCLEAR NMR SPECTROSCOPY AND DISTANCE GEOMETRY, 15 STRUCTURES | C.SICH,O.OHLENSCHLAGER,R.RAMACHANDRAN,M.GORLACH,L.R.BROWN | |
1R9F | FR3D | 38 | 19 | 1.9 | 1-27-04 | synthetic | CRYSTAL STRUCTURE OF P19 COMPLEXED WITH 19-BP SMALL INTERFERING RNA | K.YE,L.MALININA,D.J.PATEL | |
1ATO | FR3D | 190 | 60 | SOLUTION NMR | 11-12-97 | HEPATITIS DELTA VIRUS | THE STRUCTURE OF THE ISOLATED, CENTRAL HAIRPIN OF THE HDV ANTIGENOMIC RIBOZYME, NMR, 10 STRUCTURES | M.H.KOLK,H.A.HEUS,C.W.HILBERS | |
3CZ3 | FR3D | 76 | 36 | 3.2 | 5-05-09 | synthetic,TOMATO ASPERMY VIRUS | CRYSTAL STRUCTURE OF TOMATO ASPERMY VIRUS 2B IN COMPLEX WITH SIRNA | J.B.MA,F.LI,S.W.DING,D.J.PATEL | |
1ZEV | FR3D | 36 | 13 | 1.6 | 10-25-05 | synthetic | CRYSTAL STRUCTURE OF A PATHOGENIC RNA: CUG REPEATS | B.H.MOOERS,J.S.LOGUE,J.A.BERGLUND | 3GM7 |
2GVO | FR3D | 378 | 113 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF A PURINE RICH HEXALOOP HAIRPIN BELONGING TO PGY/MDR1 MRNA AND TARGETED BY ANTISENSE OLIGONUCLEOTIDES | F.JOLI,N.BOUCHEMAL,A.LAIGLE,B.HARTMANN,E.HANTZ | |
1T0D | FR3D | 64 | 28 | 2.2 | 6-15-04 | synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | 2A04 1ZZ5 1T0E 1ZX7 |
3OL9 | FR3D | 140 | 62 | 2.2 | 12-22-10 | synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH 3'-DEOXY-CTP | P.GONG,O.B.PEERSEN | 3OLB 3OL7 3OL8 3OL6 3OLA |
3BT7 | FR3D | 36 | 11 | 2.4 | 4-29-08 | synthetic | STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE TRMA IN COMPLEX WITH 19 NUCLEOTIDE T-ARM ANALOGUE | A.ALIAN,R.M.STROUD,J.FINER-MOORE | |
1NZ1 | FR3D | 391 | 153 | SOLUTION NMR | 5-13-03 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM-LOOP CONTAINING AN SP PHOSPHOROTHIOATE AT NUCLEOTIDE U80 | N.J.REITER,L.J.NIKSTAD,A.M.ALLMAN,R.J.JOHNSON,S.E.BUTCHER | |
1AJF | FR3D | 18 | 8 | SOLUTION NMR | 7-07-97 | synthetic | SOLUTION STRUCTURE OF THE P5B STEM LOOP FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE | J.S.KIEFT,I.TINOCO JUNIOR | |
3KS8 | FR3D | 36 | 18 | 2.4 | 1-12-10 | synthetic | CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMAIN IN COMPLEX WITH 18BP DSRNA | C.R.KIMBERLIN,Z.A.BORNHOLDT,S.LI,V.L.WOODS,I.J.MACRAE, E.O.SAPHIRE | |
2QH4 | FR3D | 360 | 121 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U85 C/D-H/ACA SCARNA 5' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1U1Y | FR3D | 31 | 11 | 2.9 | 12-07-04 | ENTEROBACTERIO PHAGE MS2 | CRYSTAL STRUCTURE OF A COMPLEX BETWEEN WT BACTERIOPHAGE MS2 COAT PROTEIN AND AN F5 APTAMER RNA STEMLOOP WITH 2AMINOPURINE SUBSTITUTED AT THE-10 POSITION | W.T.HORN,M.A.CONVERY,N.J.STONEHOUSE,C.J.ADAMS,L.LILJAS, S.E.PHILLIPS,P.G.STOCKLEY | 5MSF |
1SI3 | FR3D | 18 | 6 | 2.6 | 5-25-04 | synthetic | CRYSTAL STRUCTURE OF THE PAZ DOMAIN OF HUMAN EIF2C1 IN COMPLEX WITH A 9-MER SIRNA-LIKE DUPLEX | K.YE,J.B.MA,D.PATEL | |
1F6U | FR3D | 360 | 109 | SOLUTION NMR | 10-09-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | NMR STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO STEM-LOOP SL2 OF THE PSI-RNA PACKAGING SIGNAL. IMPLICATIONS FOR GENOME RECOGNITION | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,K.J.CHANCELLOR, M.F.SUMMERS | |
1Z30 | FR3D | 270 | 105 | SOLUTION NMR | 4-26-05 | synthetic | NMR STRUCTURE OF THE APICAL PART OF STEMLOOP D FROM CLOVERLEAF 1 OF BOVINE ENTEROVIRUS 1 RNA | Y.IHLE,O.OHLENSCHLAGER,E.DUCHARDT,R.RAMACHANDRAN,M.GORLACH | |
1F5U | FR3D | 36 | 16 | SOLUTION NMR | 8-21-00 | synthetic | SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM- LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA | C.-H.KIM,I.TINOCO JR. | |
2GJW | FR3D | 71 | 32 | 2.9 | 9-12-06 | synthetic | RNA RECOGNITION AND CLEAVAGE BY AN SPLICING ENDONUCLEASE | S.XUE,K.CALVIN,H.LI | |
2JLT | FR3D | 32 | 15 | 2.9 | 8-18-09 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN RNA KISSING COMPLEX | C.DIPRIMO,S.FRIBOURG | |
2OE5 | FR3D | 33 | 14 | 1.5 | 2-13-07 | synthetic | .5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'- OVERHANG | T.HERMANN,V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 2OE8 2OE6 |
2JR4 | FR3D | 187 | 59 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E.COLI TRNA-VAL3 WITH NO MODIFICATIONS | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
1R3E | FR3D | 50 | 20 | 2.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA-PROTEIN RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT | H.PAN,S.AGARWALLA,D.T.MOUSTAKAS,J.FINER-MOORE,R.M.STROUD | |
1JBS | FR3D | 34 | 12 | 2.0 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN AND A 29-MER SRD RNA ANALOG | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | |
1YN1 | FR3D | 187 | 66 | SOLUTION NMR | 1-24-06 | synthetic | SOLUTION STRUCTURE OF THE VS RIBOZYME STEM-LOOP V IN THE PRESENCE OF MGCL2 | D.O.CAMPBELL,P.LEGAULT | 1TBK 1YN2 |
2D18 | FR3D | 374 | 153 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2D2L | FR3D | 58 | 26 | 2.5 | 11-01-05 | synthetic | CRYSTAL STRUCTURE OF A MINIMAL, ALL-RNA HAIRPIN RIBOZYME WITH A PROPYL LINKER (C3) AT POSITION U39 | S.ALAM,V.GRUM-TOKARS,J.KRUCINSKA,M.L.KUNDRACIK,J.E.WEDEKIND | |
1BZ3 | FR3D | 17 | 5 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | 1BZT |
2KPD | FR3D | 170 | 42 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV-MUTANT | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
1E7K | FR3D | 34 | 14 | 2.9 | 2-19-01 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL 15.5KD PROTEIN BOUND TO A U4 SNRNA FRAGMENT | I.VIDOVIC,S.NOTTROTT,K.HARTHMUTH,R.LUHRMANN,R.FICNER | |
2KRP | FR3D | 170 | 56 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG2(ACG) ANTICODON STEM AND LOOP | Y.BILBILLE,P.F.AGRIS | |
1KKA | FR3D | 136 | 47 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
1BZ2 | FR3D | 17 | 6 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
2KPC | FR3D | 170 | 56 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
2KVN | FR3D | 510 | 152 | SOLUTION NMR | 7-07-10 | synthetic | PHI29 E-LOOP HAIRPIN | S.M.HARRIS,S.J.SCHROEDER | |
1J4Y | FR3D | 17 | 6 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
2D19 | FR3D | 374 | 164 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
1ATV | FR3D | 68 | 24 | SOLUTION NMR | 2-25-98 | synthetic | HAIRPIN WITH AGAA TETRALOOP, NMR, 4 STRUCTURES | H.KANG | |
1WKS | FR3D | 357 | 144 | SOLUTION NMR | 6-22-04 | synthetic | SOLUTION STRUCTURE OF AN RNA STEM-LOOP DERIVED FROM THE 3' CONSERVED REGION OF EEL LINE UNAL2 | S.BABA,M.KAJIKAWA,N.OKADA,G.KAWAI | |
1N53 | FR3D | 25 | 8 | SOLUTION NMR | 4-29-03 | synthetic | SOLUTION STRUCTURE OF B. SUBTILIS T BOX ANTITERMINATOR RNA | M.S.GERDEMAN,T.M.HENKIN,J.V.HINES | |
1LU3 | FR3D | 16 | 3 | 16.8 | 6-26-02 | SACCHAROMYCES CEREVISIAE | SEPARATE FITTING OF THE ANTICODON LOOP REGION OF TRNA (NUCLEOTIDE 26-42) IN THE LOW RESOLUTION CRYO-EM MAP OF AN EF-TU TERNARY COMPLEX (GDP AND KIRROMYCIN) BOUND TO E. COLI 70S RIBOSOME | M.VALLE,J.SENGUPTA,N.K.SWAMI,R.A.GRASSUCCI,N.BURKHARDT, K.H.NIERHAUS,R.K.AGRAWAL,J.FRANK | |
2RN1 | FR3D | 544 | 284 | SOLUTION NMR | 9-23-08 | synthetic | LIQUID CRYSTAL SOLUTION STRUCTURE OF THE KISSING COMPLEX FORMED BY THE APICAL LOOP OF THE HIV TAR RNA AND A HIGH AFFINITY RNA APTAMER OPTIMIZED BY SELEX | H.VAN MELCKEBEKE,M.DEVANY,C.DI PRIMO,F.BEAURAIN,J.TOULME, D.L.BRYCE,J.BOISBOUVIER | 1KIS |
2L6I | FR3D | 432 | 162 | SOLUTION NMR | 3-23-11 | synthetic | SOLUTION STRUCTURE OF CORONAVIRAL STEM-LOOP 2 (SL2) | C.LEE,L.LI,D.P.GIEDROC | |
420D | FR3D | 32 | 16 | 1.9 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES | B.PAN,S.N.MITRA,M.SUNDARALINGAM | 1YZD 1YY0 1Z7F 1Z79 405D 2H1M |
1JTW | FR3D | 224 | 65 | SOLUTION NMR | 12-12-01 | synthetic | STRUCTURE OF SL4 RNA FROM THE HIV-1 PACKAGING SIGNAL | D.J.KERWOOD,M.J.CAVALUZZI,P.N.BORER | |
2D17 | FR3D | 330 | 141 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV- 1 DIMERIZATION INITIATION SITE | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3L26 | FR3D | 16 | 8 | 2.4 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | 333D |
2PN9 | FR3D | 300 | 126 | SOLUTION NMR | 10-30-07 | synthetic | NMR STRUCTURE OF A KISSING COMPLEX FORMED BETWEEN THE TAR RNA ELEMENT OF HIV-1 AND A LNA MODIFIED APTAMER | I.LEBARS,T.RICHARD,C.DI PRIMO,J.-J.TOULME | 2OOM |
406D | FR3D | 32 | 15 | 1.8 | 2-05-99 | engineered | '-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3' | S.A.SHAH,A.T.BRUNGER | |
1RXA | FR3D | 16 | 8 | 2.9 | 10-20-96 | synthetic | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | S.PORTMANN,N.USMAN,M.EGLI | |
1XWU | FR3D | 16 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF ACAUAGA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
1JWC | FR3D | 16 | 6 | SOLUTION NMR | 3-20-02 | synthetic | NMR SOLUTION STRUCTURE OF THE RNA HAIRPIN BINDING SITE FOR THE HISTONE STEM-LOOP BINDING PROTEIN | E.S.DEJONG,W.F.MARZLUFF,E.P.NIKONOWICZ | 1JU7 |
1ZBH | FR3D | 32 | 10 | 3.0 | 9-26-06 | synthetic | '-END SPECIFIC RECOGNITION OF HISTONE MRNA STEM-LOOP BY 3'- EXONUCLEASE | Y.CHENG,D.J.PATEL | |
1BZU | FR3D | 16 | 4 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS, 3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
2KYD | FR3D | 640 | 320 | SOLUTION NMR | 7-07-10 | synthetic | RDC AND RCSA REFINEMENT OF AN A-FORM RNA: IMPROVEMENTS IN MAJOR GROOVE WIDTH | B.S.TOLBERT,M.F.SUMMERS,Y.MIYAZAKI,S.BARTON,B.KINDE,P.STARK,R.SINGH, A.BAX,D.CASE | |
2KRZ | FR3D | 160 | 39 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET | Y.BILBILLE,P.F.AGRIS | |
1QFQ | FR3D | 435 | 145 | SOLUTION NMR | 4-20-99 | ENTEROBACTERIA PHAGE LAMBDA | BACTERIOPHAGE LAMBDA N-PROTEIN-NUTBOXB-RNA COMPLEX | M.SCHAERPF,H.STICHT,P.ROESCH | 1HJI |
3AGV | FR3D | 25 | 2 | 2.1 | 11-10-10 | synthetic | CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX | Y.NOMURA,S.SUGIYAMA,T.SAKAMOTO,S.MIYAKAWA,H.ADACHI,K.TAKANO, S.MURAKAMI,T.INOUE,Y.MORI,Y.NAKAMURA,H.MATSUMURA | |
397D | FR3D | 27 | 11 | 1.3 | 9-11-98 | synthetic | A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS- ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION- DEPENDENT BULGE CONFORMATION | J.A.IPPOLITO,T.A.STEITZ | |
1CSL | FR3D | 28 | 11 | 1.6 | 2-14-00 | synthetic | CRYSTAL STRUCTURE OF THE RRE HIGH AFFINITY SITE | J.A.IPPOLITO,T.A.STEITZ | |
1T0K | FR3D | 27 | 11 | 3.2 | 7-20-04 | synthetic | JOINT X-RAY AND NMR REFINEMENT OF YEAST L30E-MRNA COMPLEX | J.A.CHAO,J.R.WILLIAMSON | |
1ATW | FR3D | 45 | 15 | SOLUTION NMR | 2-25-98 | synthetic | HAIRPIN WITH AGAU TETRALOOP, NMR, 3 STRUCTURES | H.KANG | |
3DD2 | FR3D | 15 | 3 | 1.9 | 11-11-08 | synthetic | CRYSTAL STRUCTURE OF AN RNA APTAMER BOUND TO HUMAN THROMBIN | S.B.LONG,B.A.SULLENGER | |
1Q75 | FR3D | 300 | 120 | SOLUTION NMR | 12-23-03 | synthetic | SOLUTION STRUCTURE OF THE DYSKERATOSIS CONGENITA MUTANT P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,J.FEIGON | |
1OQ0 | FR3D | 300 | 120 | SOLUTION NMR | 5-13-03 | synthetic | P6.1 STEM LOOP FROM THE ACTIVATION DOMAIN OF HTR | T.LEEPER,N.LEULLIOT,G.VARANI | |
2IZN | FR3D | 26 | 8 | 2.6 | 7-27-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (G-10) COMPLEX | C.HELGSTRAND,E.GRAHN,T.MOSS,N.J.STONEHOUSE,K.TARS, P.G.STOCKLEY,L.LILJAS | |
2B3J | FR3D | 50 | 12 | 2.0 | 1-24-06 | synthetic | CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DEAMINASE, TADA, IN COMPLEX WITH RNA | H.C.LOSEY,A.J.RUTHENBURG,G.L.VERDINE | |
2I91 | FR3D | 45 | 14 | 2.6 | 10-17-06 | synthetic | KDA RO AUTOANTIGEN IN COMPLEX WITH A FRAGMENT OF MISFOLDED RNA | K.M.REINISCH,A.J.STEIN | |
2AZ2 | FR3D | 30 | 12 | 2.6 | 10-11-05 | synthetic | FLOCK HOUSE VIRUS B2-DSRNA COMPLEX (P4122) | J.A.CHAO,J.H.LEE,B.R.CHAPADOS,E.W.DEBLER,A.SCHNEEMANN, J.R.WILLIAMSON | 2AZ0 |
1XWP | FR3D | 15 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF AUCGCA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
2F8K | FR3D | 15 | 6 | 2.0 | 1-24-06 | synthetic | SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1 | T.AVIV,Z.LIN,G.BEN-ARI,C.A.SMIBERT,F.SICHERI | |
1A4T | FR3D | 300 | 115 | SOLUTION NMR | 4-29-98 | synthetic | SOLUTION STRUCTURE OF PHAGE P22 N PEPTIDE-BOX B RNA COMPLEX, NMR, 20 STRUCTURES | Z.CAI,A.A.GORIN,R.FREDERICK,X.YE,W.HU,A.MAJUMDAR,A.KETTANI, D.J.PATEL | |
3EQT | FR3D | 16 | 8 | 2.0 | 3-10-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA | P.LI,X.LI | 3OG8 1DI2 1PBM 3JXQ 3ADL 1RC7 3JXR 1G3A 3LRN |
1K4B | FR3D | 280 | 100 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
6MSF | FR3D | 24 | 8 | 2.8 | 7-08-98 | ENTEROBACTERIO PHAGE MS2,synthetic | F6 APTAMER MS2 COAT PROTEIN COMPLEX | M.A.CONVERY,S.ROWSELL,N.J.STONEHOUSE,A.D.ELLINGTON,I.HIRAO, J.B.MURRAY,D.S.PEABODY,S.E.V.PHILLIPS,P.G.STOCKLEY | |
1C0O | FR3D | 266 | 109 | SOLUTION NMR | 8-31-99 | TETRAHYMENA THERMOPHILA | SOLUTION STRUCTURE OF THE P5 HAIRPIN FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, 19 CONVERGED STRUCTURES | G.COLMENAREJO,I.TINOCO JR. | |
1KOD | FR3D | 25 | 6 | SOLUTION NMR | 11-08-96 | synthetic | RNA APTAMER COMPLEXED WITH CITRULLINE, NMR | Y.S.YANG,M.KOCHOYAN,P.BURGSTALLER,E.WESTHOF,M.FAMULOK | |
1G2J | FR3D | 14 | 6 | 2.0 | 12-06-00 | synthetic | RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE | G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN, L.BEIGELMAN,M.EGLI | |
1FHK | FR3D | 210 | 80 | SOLUTION NMR | 3-21-01 | synthetic | NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI | S.V.MOROSYUK,P.R.CUNNINGHAM,J.SANTALUCIA JR. | |
1F85 | FR3D | 280 | 68 | SOLUTION NMR | 11-17-00 | synthetic | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE | P.J.LUKAVSKY,G.A.OTTO,A.M.LANCASTER,P.SARNOW,J.D.PUGLISI | |
3OIN | FR3D | 14 | 4 | 1.9 | 12-01-10 | synthetic | CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NEP1/EMG1 BOUND TO S- ADENOSYLHOMOCYSTEINE AND 1 MOLECULE OF COGNATE RNA | S.R.THOMAS,N.LARONDE-LEBLANC | 3OIJ |
1KOC | FR3D | 25 | 6 | SOLUTION NMR | 8-17-96 | synthetic | RNA APTAMER COMPLEXED WITH ARGININE, NMR | Y.S.YANG,M.KOCHOYAN,P.BURGSTALLER,E.WESTHOF,M.FAMULOK | |
2XLI | FR3D | 13 | 5 | 2.3 | 9-22-10 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, MONOCLINIC FORM | R.E.HAURWITZ,M.JINEK,B.WIEDENHEFT,K.ZHOU,J.A.DOUDNA | 2XLJ 2XLK |
1MHK | FR3D | 26 | 9 | 2.5 | 9-06-02 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF A 26MER RNA MOLECULE, REPRESENTING A NEW RNA MOTIF, THE HOOK-TURN | S.SZEP,J.WANG,P.B.MOORE | |
1TFY | FR3D | 73 | 30 | 3.2 | 8-10-04 | synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1DUQ | FR3D | 104 | 44 | 2.1 | 5-16-00 | synthetic | CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1 | L.-W.HUNG,E.L.HOLBROOK,S.R.HOLBROOK | |
1K4A | FR3D | 280 | 114 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGAA RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
1ROQ | FR3D | 140 | 58 | SOLUTION NMR | 5-18-04 | synthetic | EXTENDING THE FAMILY OF UNCG-LIKE TETRALOOP MOTIFS: NMR STRUCTURE OF A CACG TETRALOOP FROM COXSACKIEVIRUS B3 | Z.DU,J.YU,R.ANDINO,T.L.JAMES | |
1MY9 | FR3D | 28 | 11 | SOLUTION NMR | 10-07-03 | synthetic | SOLUTION STRUCTURE OF A K+ CATION STABILIZED DIMERIC RNA QUADRUPLEX CONTAINING TWO G:G(:A):G:G(:A) HEXADS, G:G:G:G TETRADS AND UUUU LOOPS | H.LIU,A.MATSUGAMI,M.KATAHIRA,S.UESUGI | |
2R93 | FR3D | 14 | 6 | 4.0 | 11-27-07 | synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
1A3M | FR3D | 540 | 202 | SOLUTION NMR | 4-29-98 | synthetic | PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES | D.FOURMY,S.YOSHIZAWA,J.D.PUGLISI | |
1RNA | FR3D | 28 | 14 | 2.2 | 4-15-91 | synthetic | CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2 | A.C.DOCK-BREGEON,B.CHEVRIER,A.PODJARNY,J.JOHNSON,J.S.DE BEAR,G.R.GOUGH,P.T.GILHAM,D.MORAS | |
433D | FR3D | 28 | 14 | 2.1 | 12-04-98 | synthetic | CRYSTAL STRUCTURE OF A 14 BASE PAIR RNA DUPLEX WITH NONSYMMETRICAL TANDEM G.U WOBBLE BASE PAIRS | J.TRIKHA,D.J.FILMAN,J.M.HOGLE | |
7MSF | FR3D | 25 | 8 | 2.8 | 11-11-98 | ENTEROBACTERIO PHAGE MS2 | MS2 PROTEIN CAPSID/RNA COMPLEX | S.ROWSELL,N.J.STONEHOUSE,M.A.CONVERY,C.J.ADAMS, A.D.ELLINGTON,I.HIRAO,D.S.PEABODY,P.G.STOCKLEY, S.E.V.PHILLIPS | |
1IK1 | FR3D | 14 | 5 | SOLUTION NMR | 7-18-01 | synthetic | SOLUTION STRUCTURE OF AN RNA HAIRPIN FROM HRV-14 | H.HUANG,A.ALEXANDROV,X.CHEN,T.W.BARNES III,H.ZHANG,K.DUTTA, S.M.PASCAL | |
2EVY | FR3D | 252 | 90 | SOLUTION NMR | 8-22-06 | synthetic | GNYA TETRANUCLEOTIDE LOOPS FOUND IN POLIOVIRUS ORIL BY IN VIVO SELEX (UN)EXPECTEDLY FORM A YNMG-LIKE STRUCTURE | W.J.G.MELCHERS,J.ZOLL,M.TESSARI,D.V.BAKHMUTOV,A.P.GMYL, V.I.AGOL,H.A.HEUS | |
3P59 | FR3D | 94 | 35 | 2.2 | 4-06-11 | synthetic | FIRST CRYSTAL STRUCTURE OF A RNA NANOSQUARE | S.DIBROV,T.HERMANN,J.MCLEAN,J.PARSONS | |
2KOC | FR3D | 280 | 120 | SOLUTION NMR | 12-01-09 | synthetic | NMR SOLUTION STRUCTURE OF A 14-MER HAIRPIN RNA WITH CUUCGG TETRALOOP | S.NOZINOVIC,B.FUERTIG,H.R.A.JONKER,C.RICHTER,H.SCHWALBE | |
3CGR | FR3D | 24 | 10 | 2.1 | 7-01-08 | synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
1HS2 | FR3D | 13 | 4 | SOLUTION NMR | 8-29-01 | synthetic | SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAGU AS PART OF HAIRPIN R(GCGUUAAGUCGCA) | H.ZHANG,M.A.FOUNTAIN,T.R.KRUGH | 1HS1 1HS8 1HS3 1HS4 |
3MQK | FR3D | 22 | 5 | 2.8 | 12-29-10 | synthetic | CBF5-NOP10-GAR1 COMPLEX BINDING WITH 17MER RNA CONTAINING ACA TRINUCLEOTIDE | J.ZHOU,B.LIANG,H.LI | |
1NUJ | FR3D | 96 | 37 | 1.8 | 8-19-03 | synthetic | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | J.E.WEDEKIND,D.B.MCKAY | 1NUV 429D |
3CGS | FR3D | 24 | 10 | 1.6 | 7-01-08 | synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND MAMMALIAN INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
1VOP | FR3D | 429 | 165 | SOLUTION NMR | 12-24-97 | synthetic | CONSERVED RNA COMPONENT OF THE PEPTIDYL TRANSFERASE CENTER, NMR, 33 STRUCTURES | E.V.PUGLISI,J.D.PUGLISI | |
1JZC | FR3D | 13 | 3 | SOLUTION NMR | 10-07-03 | synthetic | THE SOLUTION STRUCTURE OF THE MUTANT 5'AUG3' TRILOOP IN THE RNA PROMOTER REGION OF THE BROME MOSAIC VIRUS GENOMIC (+)- RNA | C.-H.KIM,C.C.KAO | |
1I4C | FR3D | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MINOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
1AM0 | FR3D | 128 | 19 | SOLUTION NMR | 7-23-97 | synthetic | AMP RNA APTAMER COMPLEX, NMR, 8 STRUCTURES | F.JIANG,R.A.KUMAR,R.A.JONES,D.J.PATEL | |
1FUF | FR3D | 26 | 12 | 1.7 | 11-09-01 | synthetic | CRYSTAL STRUCTURE OF A 14BP RNA OLIGONUCLEOTIDE CONTAINING DOUBLE UU BULGES: A NOVEL INTRAMOLECULAR U*(AU) BASE TRIPLE | J.DENG,Y.XIONG,C.SUDARSANAKUMAR,K.SHI,M.SUNDARALINGAM | 1IK5 |
1ESH | FR3D | 13 | 6 | SOLUTION NMR | 4-24-00 | synthetic | THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | C.-H.KIM,C.C.KAO,I.TINOCO JR. | 1I46 |
3CGP | FR3D | 24 | 10 | 1.6 | 7-01-08 | synthetic | X-RAY STRUCTURE OF A PSEUDOURIDINE-CONTAINING YEAST SPLICEOSOMAL U2 SNRNA-INTRON BRANCH SITE DUPLEX BOUND TO IODIDE IONS | Y.LIN,C.L.KIELKOPF | 3CGQ |
1TFW | FR3D | 76 | 28 | 2.2 | 8-10-04 | synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1K8S | FR3D | 25 | 12 | SOLUTION NMR | 11-14-01 | synthetic | BULGED ADENOSINE IN AN RNA DUPLEX | V.THIVIYANATHAN,A.B.GULIAEV,N.B.LEONTIS,D.G.GORENSTEIN | |
1ELH | FR3D | 150 | 59 | SOLUTION NMR | 1-31-94 | ESCHERICHIA COLI | NMR ANALYSIS OF HELIX I FROM THE 5S RNA OF ESCHERICHIA COLI | S.WHITE,P.MOORE | |
1I4B | FR3D | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MAJOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
2R22 | FR3D | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | 2R1S 2R21 2R20 |
1I9X | FR3D | 26 | 12 | 2.2 | 9-05-01 | synthetic | CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX | J.A.BERGLUND,M.ROSBASH,S.C.SCHULTZ | |
1ZIG | FR3D | 120 | 50 | SOLUTION NMR | 3-12-97 | synthetic | GAGA RNA TETRALOOP, NMR, 10 STRUCTURES | F.M.JUCKER,H.A.HEUS,P.F.YIP,E.MOORS,A.PARDI | 1ZIH 1ZIF |
2KBP | FR3D | 240 | 98 | SOLUTION NMR | 3-24-09 | synthetic | SOLUTION STRUCTURE OF A G-QUADRUPLEX OF HUMAN TELOMERIC RNA | A.T.PHAN,H.MARTADINATA | |
1ZSE | FR3D | 12 | 4 | 3.0 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 2B2D 2BS0 2BS1 |
2K7E | FR3D | 220 | 98 | SOLUTION NMR | 10-07-08 | synthetic | NMR STRUCTURE OF THE HUMAN TRNALYS3 BOUND TO THE HIV GENOME LOOP I | Y.BILBILLE,F.P.A.VENDEIX,R.GUENTHER,A.MALKIEWICZ,X.ARIZA, J.VILARRASA,P.AGRIS | |
157D | FR3D | 24 | 12 | 1.8 | 5-31-94 | synthetic | CRYSTAL AND MOLECULAR STRUCTURE OF R(CGCGAAUUAGCG): AN RNA DUPLEX CONTAINING TWO G(ANTI).A(ANTI) BASE-PAIRS | G.A.LEONARD,K.E.MCAULEY-HECHT,S.EBEL,D.M.LOUGH,T.BROWN, W.N.HUNTER | 1YYO 1YYK 2G92 2Q1O |
3FTM | FR3D | 46 | 18 | 2.7 | 2-24-09 | synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 1 | J.N.PITT,A.R.FERRE-D'AMARE | 3FS0 |
205D | FR3D | 24 | 12 | 2.6 | 9-15-95 | engineered | STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP | K.J.BAEYENS,H.L.DE BONDT,S.R.HOLBROOK | |
354D | FR3D | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
1AJT | FR3D | 19 | 4 | SOLUTION NMR | 8-20-97 | synthetic | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON, NMR, 1 STRUCTURE | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
1RNG | FR3D | 60 | 24 | SOLUTION NMR | 12-07-95 | synthetic | SOLUTION STRUCTURE OF THE CUUG HAIRPIN: A NOVEL RNA TETRALOOP MOTIF | F.M.JUCKER,A.PARDI | |
3CJZ | FR3D | 24 | 10 | 1.8 | 10-14-08 | synthetic | EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS | P.S.PALLAN,C.KREUTZ,S.BOSIO,R.MICURA,M.EGLI | |
1YYW | FR3D | 96 | 48 | 2.8 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.8-ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
422D | FR3D | 24 | 8 | 2.6 | 6-03-03 | engineered | '-R(*GP*AP*UP*CP*AP*CP*UP*UP*CP*GP*GP*U)-3' | S.ESWARAMOORTHY,S.T.RAO,M.SUNDARALINGAM | |
1B7F | FR3D | 24 | 2 | 2.6 | 5-03-99 | synthetic | SXL-LETHAL PROTEIN/RNA COMPLEX | N.HANDA,O.NUREKI,K.KURIMOTO,I.KIM,H.SAKAMOTO,Y.SHIMURA, Y.MUTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1QBP | FR3D | 72 | 29 | 2.1 | 11-26-99 | synthetic | CRYSTAL STRUCTURE OF A BROMINATED RNA HELIX WITH FOUR MISMATCHED BASE PAIRS | A.C.ANDERSON,R.H.O'NEIL,D.J.FILMAN,C.A.FREDERICK | |
3MIJ | FR3D | 12 | 3 | 2.6 | 2-16-11 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA G-QUADRUPLEX COMPLEXED WITH AN ACRIDINE-BASED LIGAND. | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
2RQJ | FR3D | 216 | 146 | SOLUTION NMR | 11-17-09 | synthetic | QUADRUPLEX STRUCTURE OF AN RNA APTAMER AGAINST BOVINE PRION PROTEIN | M.KATAHIRA,T.MASHIMA,A.MATSUGAMI,F.NISHIKAWA,S.NISHIKAWA | |
2F87 | FR3D | 156 | 52 | SOLUTION NMR | 8-08-06 | synthetic | SOLUTION STRUCTURE OF A GAAG TETRALOOP IN SRP RNA FROM PYROCOCCUS FURIOSUS | K.OKADA,M.TAKAHASHI,T.SAKAMOTO,K.NAKAMURA,A.KANAI,G KAWAI | |
280D | FR3D | 48 | 24 | 2.4 | 9-30-96 | engineered | THE STRUCTURE OF AN RNA DODECAMER SHOWS HOW TANDEM U-U BASE PAIRS INCREASE THE RANGE OF STABLE RNA STRUCTURES AND THE DIVERSITY OF RECOGNITION SITES | S.E.LIETZKE,C.L.BARNES,C.E.KUNDROT | |
1AFX | FR3D | 156 | 60 | SOLUTION NMR | 5-15-97 | synthetic | UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1SDR | FR3D | 48 | 24 | 2.6 | 2-27-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE | H.SCHINDELIN,M.ZHANG,R.BALD,J.-P.FUERSTE,V.A.ERDMANN, U.HEINEMANN | |
1AJL | FR3D | 19 | 6 | SOLUTION NMR | 7-07-97 | TETRAHYMENA THERMOPHILA | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
1AL5 | FR3D | 288 | 144 | SOLUTION NMR | 12-17-97 | synthetic | A-TRACT RNA DODECAMER, NMR, 12 STRUCTURES | M.R.CONTE,G.L.CONN,T.BROWN,A.N.LANE | |
353D | FR3D | 24 | 11 | 2.4 | 11-10-97 | synthetic | CRYSTAL STRUCTURE OF DOMAIN A OF THERMUS FLAVUS 5S RRNA AND THE CONTRIBUTION OF WATER MOLECULES TO ITS STRUCTURE | C.BETZEL,S.LORENZ,J.P.FURSTE,R.BALD,M.ZHANG,T.R.SCHNEIDER, K.S.WILSON,V.A.ERDMANN | |
1KD5 | FR3D | 22 | 10 | 1.6 | 3-04-03 | synthetic | THE CRYSTAL STRUCTURE OF R(GGUCACAGCCC)2 METAL FREE FORM | V.KACER,S.A.SCARINGE,J.N.SCARSDALE,J.P.RIFE | 1KD4 1KD3 |
2NUG | FR3D | 44 | 20 | 1.7 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 1.7-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
3IBK | FR3D | 22 | 12 | 2.2 | 5-12-10 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA QUADRUPLEX | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
1QCU | FR3D | 44 | 22 | 1.2 | 11-11-99 | synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
2AWQ | FR3D | 160 | 38 | SOLUTION NMR | 1-17-06 | synthetic | SOLUTION STRUCTURE OF PSEUDOURIDINE-32 MODIFIED ANTICODON STEM-LOOP OF E. COLI TRNAPHE | J.CABELLO-VILLEGAS,E.P.NIKONOWICZ | |
3LRR | FR3D | 22 | 9 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 12 BP AU RICH 5' PPP DSRNA | P.LI | |
2KRV | FR3D | 150 | 50 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG1 (ICG) ASL CONTAINING THE 2-THIOCYTIDINE MODIFICATION | Y.BILBILLE,P.F.AGRIS | 2KRW 2KRQ |
2KY1 | FR3D | 220 | 100 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'UAGA/3'AGAU | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1I3Y | FR3D | 378 | 146 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA. | J.D.PUGLISI,S.C.BLANCHARD | |
2KXZ | FR3D | 154 | 70 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'AAGU/3'UGAA | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1LNT | FR3D | 22 | 11 | 1.7 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP | J.DENG,Y.XIONG,B.PAN,M.SUNDARALINGAM | |
3NCU | FR3D | 22 | 10 | 2.5 | 6-30-10 | synthetic | STRUCTURAL AND FUNCTIONAL INSIGHTS INTO PATTERN RECOGNITION BY THE INNATE IMMUNE RECEPTOR RIG-I | G.SHENG,H.LI | |
1TUT | FR3D | 22 | 11 | SOLUTION NMR | 12-28-04 | synthetic | J4/5 LOOP FROM THE CANDIDA ALBICANS AND CANDIDA DUBLINIENSIS GROUP I INTRONS | B.M.ZNOSKO,S.D.KENNEDY,P.C.WILLE,T.R.KRUGH,D.H.TURNER | |
2KY0 | FR3D | 220 | 100 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'GAGC/3'CGAG | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
2JXQ | FR3D | 200 | 100 | SOLUTION NMR | 5-20-08 | synthetic | NMR STRUCTURE OF RNA DUPLEX | L.POPENDA,R.W.ADAMIAK,Z.GDANIEC | 2JXS |
1YZ9 | FR3D | 44 | 20 | 2.1 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III MUTANT E110Q FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.1- ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
1WTS | FR3D | 11 | 5 | SOLUTION NMR | 1-27-99 | synthetic | HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE | J.P.RIFE,P.B.MOORE | |
1LMV | FR3D | 190 | 86 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE UNMODIFIED U2 SNRNA-INTRON BRANCH SITE HELIX FROM S. CEREVISIAE | M.I.NEWBY,N.L.GREENBAUM | |
2JRG | FR3D | 165 | 58 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 2 MODIFICATIONS (CMO5U34 M6A37) | F.A.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | 2JSG |
1FEQ | FR3D | 176 | 59 | SOLUTION NMR | 11-22-00 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF TRNA(LYS3) WITH T6A MODIFICATION AT POSITION 37 | J.W.STUART,Z.GDANIEC,R.H.GUENTHER,M.MARSZALEK,E.SOCHACKA, A.MALKIEWICZ,P.F.AGRIS | |
3ADI | FR3D | 20 | 9 | 3.2 | 5-26-10 | synthetic | STRUCTURE OF ARABIDOPSIS HYL1 AND ITS MOLECULAR IMPLICATIONS FOR MIRNA PROCESSING | Y.A.YUAN,H.Y.CHEN | |
3HGA | FR3D | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
2R92 | FR3D | 19 | 8 | 3.8 | 11-27-07 | synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH ARTIFICIAL RDRP SCAFFOLD | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
1F5G | FR3D | 520 | 260 | SOLUTION NMR | 6-26-00 | synthetic | THE G7(SYN)-G4(ANTI) STRUCTURE OF R(GCAGGCGUGC)2 | M.E.BURKARD,D.H.TURNER | 1F5H |
1XV0 | FR3D | 627 | 277 | SOLUTION NMR | 11-09-04 | synthetic | SOLUTION NMR STRUCTURE OF RNA INTERNAL LOOP WITH THREE CONSECUTIVE SHEARED GA PAIRS IN 5'GGUGGAGGCU/3'PCCGAAGCCG | G.CHEN,B.M.ZNOSKO,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | 2DD1 |
2DD3 | FR3D | 342 | 137 | SOLUTION NMR | 6-13-06 | synthetic | AN ALTERNATING SHEARED AA PAIR IN 5'GGUGAAGGCU/3'PCCGAAGCCG: II. THE MINOR CONFORMATION WITH A6/A5/A16 STACK | G.CHEN,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | |
1A34 | FR3D | 20 | 9 | 1.8 | 4-29-98 | synthetic,TOBACCO NECROSIS SATELLITE VIRUS | SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX | S.B.LARSON,J.DAY,A.J.GREENWOOD,A.MCPHERSON | |
3NJ7 | FR3D | 60 | 24 | 1.9 | 8-25-10 | synthetic | .9 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
1LPW | FR3D | 162 | 76 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE YEAST SPLICEOSOMAL U2 SNRNA- INTRON BRANCH SITE HELIX FEATURING A CONSERVED PSEUDOURIDINE | M.I.NEWBY,N.L.GREENBAUM | |
2DD2 | FR3D | 513 | 217 | SOLUTION NMR | 6-13-06 | synthetic | AN ALTERNATING SHEARED AA PAIR IN 5'GGUGAAGGCU/3'PCCGAAGCCG: I. THE MAJOR CONFORMATION WITH A6/A15/A16 STACK | G.CHEN,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | |
1DQH | FR3D | 19 | 9 | 1.7 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS | Y.XIONG,M.SUNDARALINGAM | 1DQF |
1IDV | FR3D | 100 | 24 | SOLUTION NMR | 10-05-01 | synthetic | NMR STRUCTURE OF HCV IRES RNA DOMAIN IIIC | K.KALUARACHCHI,R.RIJNBRAND,S.M.LEMON,D.G.GORENSTEIN | |
1RRR | FR3D | 200 | 100 | SOLUTION NMR | 4-22-98 | synthetic | RNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURES | J.I.GYI,A.N.LANE,G.L.CONN,T.BROWN | 404D 1RRD 1OO7 |
2G1G | FR3D | 320 | 100 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF THE ANTICODON LOOP OF S. POMBE TRNAI INCLUDING THE NATURALLY OCCURRING N6-THREONYL ADENINE | E.LESCRINIER | |
1MUV | FR3D | 18 | 8 | SOLUTION NMR | 12-18-02 | synthetic | SHEARED A(ANTI)-A(ANTI) BASE PAIRS IN A DESTABILIZING 2X2 INTERNAL LOOP: THE NMR STRUCTURE OF 5'(RGGCAAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,S.J.SCHROEDER,T.R.KRUGH,D.H.TURNER | |
3BSO | FR3D | 16 | 7 | 1.7 | 1-08-08 | synthetic | NORWALK VIRUS POLYMERASE BOUND TO CYTIDINE 5'-TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | 3H5X 3H5Y |
2IRO | FR3D | 270 | 105 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
2L8U | FR3D | 18 | 8 | SOLUTION NMR | 2-23-11 | synthetic | NMR SPECTROSCOPY AND MOLECULAR DYNAMICS SIMULATION OF R(CCGCUGCGG)2 REVEAL A DYNAMIC UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH ONE HYDROGEN BOND PAIR | R.PARKESH,M.A.FOUNTAIN,M.D.DISNEY | |
2IRN | FR3D | 270 | 116 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
2K41 | FR3D | 170 | 80 | SOLUTION NMR | 11-04-08 | synthetic | NMR STRUCTURE OF URIDINE BULGED RNA DUPLEX | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
2JRQ | FR3D | 176 | 56 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 1 MODIFICATION (CMO5U34) | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
1ZH5 | FR3D | 18 | 4 | 1.9 | 1-17-06 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN | M.TEPLOVA,Y.R.YUAN,S.ILIN,L.MALININA,A.T.PHAN,A.TEPLOV, D.J.PATEL | 1YTY |
2L8W | FR3D | 18 | 9 | SOLUTION NMR | 2-23-11 | synthetic | R(CCGCUGCGG)2 UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH TWO HYDROGEN BOND PAIRS | R.PARKESH,M.FOUNTAIN,M.DISNEY | 2L8C |
1C4L | FR3D | 18 | 9 | SOLUTION NMR | 8-09-00 | synthetic | SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE- PAIR | Y.TANAKA,C.KOJIMA,T.YAMAZAKI,T.S.KODAMA,K.YASUNO, S.MIYASHITA,A.M.ONO,A.S.ONO,M.KAINOSHO,Y.KYOGOKU | |
1RAU | FR3D | 24 | 16 | SOLUTION NMR | 1-31-94 | synthetic | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | C.CHEONG,P.B.MOORE | 3KMQ 1WTT 3KOA 3KLV 3KMS 2E9Z 2E9R 1WNE 3KNA 2E9T 1ME1 2EC0 1QLN |
2K3Z | FR3D | 170 | 87 | SOLUTION NMR | 11-04-08 | synthetic | NMR STRUCTURE OF ADENOSINE BULGED RNA DUPLEX WITH C:G-A TRIPLE | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
1G2E | FR3D | 9 | 1 | 2.3 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA | X.WANG,T.M.T.HALL | |
2KY2 | FR3D | 180 | 80 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'UAGG/3'GGAU | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1YVP | FR3D | 44 | 10 | 2.2 | 6-07-05 | synthetic | RO AUTOANTIGEN COMPLEXED WITH RNAS | A.J.STEIN,G.FUCHS,C.FU,S.L.WOLIN,K.M.REINISCH | |
2KRY | FR3D | 150 | 40 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET ASL CONTAINING THE 5-FORMYLCYTIDINE MODIFICATION IN POSITION 34 | Y.BILBILLE,P.F.AGRIS | |
2H49 | FR3D | 360 | 160 | SOLUTION NMR | 11-21-06 | synthetic | THE NMR STRUCTURE OF AN INTERNAL LOOP FROM 23S RIBOSOMAL RNA OF DEINOCOCCUS RADIODURANS DIFFERS FROM THE STRUCTURE IN THE CRYSTAL OF THE RIBOSOMAL SUBUNIT | N.SHANKAR | |
2AO5 | FR3D | 36 | 16 | 2.1 | 3-28-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX R(GGCGBRUGCGCU)2 WITH TERMINAL AND INTERNAL TANDEM G-U BASE PAIRS | R.UTSUNOMIYA,K.SUTO,D.BALASUNDARESAN,A.FUKAMIZU,P.K.KUMAR, H.MIZUNO | |
2G91 | FR3D | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2OJ7 | FR3D | 80 | 21 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP | F.C.GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
2GBH | FR3D | 75 | 35 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF STEM REGION OF HELIX-35 OF 23S E.COLI RIBOSOMAL RNA (RESIDUES 736-760) | A.BAX,J.BOISBOUVIER,D.BRYCE,A.GRISHAEV,C.JARONIEC,E.MICLET, E.NIKONOVICZ,E.O'NEIL-CABELLO,J.YING | |
2KD4 | FR3D | 16 | 8 | SOLUTION NMR | 4-07-09 | synthetic | SOLUTION STRUCTURE AND THERMODYNAMICS OF 2',5' RNA INTERCALATION | E.D.HOROWITZ,S.LILAVIVAT,B.W.HOLLADAY,M.W.GERMANN,N.V.HUD | |
2GQ6 | FR3D | 32 | 16 | 1.3 | 6-27-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2GPM 2G32 2GQ7 2GQ4 |
2G3S | FR3D | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | 1EKD |
3BSN | FR3D | 16 | 6 | 1.8 | 1-08-08 | synthetic | NORWALK VIRUS POLYMERASE BOUND TO 5-NITROCYTIDINE TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | |
1N35 | FR3D | 13 | 5 | 2.5 | 12-25-02 | synthetic | LAMBDA3 ELONGATION COMPLEX WITH FOUR PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | 1N1H 1UON |
1MV2 | FR3D | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, FACE-TO-FACE AP PAIRS IN 5'(RGGCAPGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
2BGG | FR3D | 29 | 10 | 2.2 | 3-31-05 | synthetic | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX. | J.S.PARKER,S.M.ROE,D.BARFORD | |
1YFV | FR3D | 16 | 8 | SOLUTION NMR | 10-15-97 | synthetic | STRUCTURE OF (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')2 BY 2-D NMR, 1 STRUCTURE | J.SANTALUCIA JUNIOR,D.H.TURNER | 1SA9 |
1ZDJ | FR3D | 16 | 4 | 2.9 | 7-08-98 | ENTEROBACTERIO PHAGE MS2 | STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX | E.GRAHN,N.STONEHOUSE,K.VALEGARD,S.VANDENWORM,L.LILJAS | |
439D | FR3D | 16 | 8 | 1.6 | 9-14-01 | synthetic | '-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R(*CP*CP*GP*CP*CP*UP*GP*G)-3' | M.PERBANDT,S.LORENZ,M.VALLAZZA,V.A.ERDMANN,C.BETZEL | |
1QET | FR3D | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | |
1J9H | FR3D | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
1MIS | FR3D | 16 | 8 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-R(GP*CP*GP*GP*AP*CP*GP*C)-3') ANTI- PARALLEL RNA DUPLEX WITH TANDEM G:A MISMATCHES, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,D.H.TURNER | |
438D | FR3D | 16 | 8 | 2.5 | 5-12-99 | synthetic | STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS | K.SHI,M.C.WAHL,M.SUNDARALINGAM | |
1BYX | FR3D | 240 | 61 | SOLUTION NMR | 10-20-99 | synthetic | CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION | T.SZYPERSKI,M.GOETTE,M.BILLETER,E.PEROLA,L.CELLAI | |
1EKA | FR3D | 16 | 8 | SOLUTION NMR | 11-13-00 | synthetic | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | X.CHEN,J.A.MCDOWELL,R.KIERZEK,T.R.KRUGH,D.H.TURNER | |
1JZV | FR3D | 30 | 15 | 1.7 | 11-11-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA | Y.XIONG,C.SUDARSANAKUMAR,J.DENG,B.PAN,M.SUNDARALINGAM | |
402D | FR3D | 16 | 8 | 2.3 | 6-16-98 | synthetic | '-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' | S.B.JANG,L.-W.HUNG,Y.-I.CHI,E.L.HOLBROOK,R.CARTER, S.R.HOLBROOK | |
1FXL | FR3D | 8 | 1 | 1.8 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA | X.WANG,T.M.T.HALL | |
2OJ8 | FR3D | 80 | 30 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP OF THE HEPATITIS B VIRUS | F.C GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
1J6S | FR3D | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | 1D0T 1R3X 1GUC |
2IXZ | FR3D | 96 | 24 | SOLUTION NMR | 9-06-06 | synthetic | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
435D | FR3D | 28 | 14 | 1.4 | 6-14-99 | synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | 3M85 3M7N 2XPJ 2FZ2 2WJ8 1RXB 259D |
1MV1 | FR3D | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, SHEARED PA PAIRS IN 5'(RGGCPAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
1QES | FR3D | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | 176D |
398D | FR3D | 24 | 8 | 1.9 | 10-06-98 | synthetic | '-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS- STRAND SYNTHESIS OF HIV REPLICATION | U.MUELLER,G.MEIER,A.MOCHI-ONORI,L.CELLAI,H.HEUMANN | |
1MWG | FR3D | 16 | 8 | SOLUTION NMR | 3-12-97 | synthetic | STRUCTURE OF RIBONUCLEIC ACID, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,J.SANTALUCIA,D.H.TURNER | |
472D | FR3D | 16 | 8 | 1.9 | 11-27-00 | synthetic | STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS | J.DENG,M.SUNDARALINGAM | |
165D | FR3D | 16 | 8 | 1.6 | 8-31-94 | synthetic | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | W.CRUSE,P.SALUDJIAN,E.BIALA,P.STRAZEWSKI,T.PRANGE,O.KENNARD | |
3L25 | FR3D | 16 | 8 | 2.0 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
3GLP | FR3D | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
466D | FR3D | 28 | 14 | 1.2 | 8-16-99 | synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 464D 434D |
2VUQ | FR3D | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | 2JLV 1FL8 2L9E 2JLY 2K65 2O81 2JLU 2JLW 2JLX 2JLZ 2W89 |
2VAL | FR3D | 28 | 14 | 2.0 | 10-16-07 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX AT 2.0 ANGSTROM RESOLUTION | C.FORSTER,A.B.E.BRAUER,M.PERBANDT,D.LEHMANN,J.P.FURSTE, C.BETZEL,V.A.ERDMANN | |
2V6W | FR3D | 14 | 7 | 1.8 | 11-06-07 | ESCHERICHIA COLI | TRNASER ACCEPTOR STEM: CONFORMATION AND HYDRATION OF A MICROHELIX IN A CRYSTAL STRUCTURE AT 1.8 ANGSTROM RESOLUTION | C.FOERSTER,A.B.E.BRAUER,S.BRODE,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN | 1R9S 1SFO 2E2I 2KYE 3GTP 3GTJ 2NVZ 2NVQ 1R9T 2E2H 3GTQ 2YU9 2NVX 3GTG 3GTM 3GTL 3GTO 2E2J |
409D | FR3D | 42 | 18 | 2.5 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES | B.PAN,S.N.MITRA,L.SUN,D.HART,M.SUNDARALINGAM | |
1SAQ | FR3D | 35 | 12 | 2.7 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE RNA OCTAMER GIC(GA)GCC | S.B.JANG,K.BAEYENS,M.S.JEONG,J.SANTALUCIA JR,D.TURNER, S.R.HOLBROOK | |
2V7R | FR3D | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
3GVN | FR3D | 14 | 7 | 1.2 | 7-28-09 | synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
1L3Z | FR3D | 14 | 1 | 2.0 | 2-25-03 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER | K.SHI,B.PAN,M.SUNDARALINGAM | |
2A0P | FR3D | 14 | 6 | 1.9 | 8-16-05 | synthetic | CRYSTAL STRUCTURE OF RNA OLIGOMER CONTAINING 4'-THIORIBOSE | P.HAEBERLI,I.BERGER,P.S.PALLAN,M.EGLI | |
2ERR | FR3D | 210 | 28 | SOLUTION NMR | 1-10-06 | HOMO SAPIENS | NMR STRUCTURE OF THE RNA BINDING DOMAIN OF HUMAN FOX-1 IN COMPLEX WITH UGCAUGU | F.H.ALLAIN,S.D.AUWETER | |
2ADC | FR3D | 240 | 1 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD34 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
2AD9 | FR3D | 120 | 17 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD1 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
1OSU | FR3D | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
2GXB | FR3D | 12 | 6 | 2.2 | 5-01-07 | synthetic | CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA | A.ATHANASIADIS,D.PLACIDO,A.RICH | 1T4X |
1J8G | FR3D | 24 | 4 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
1YTU | FR3D | 19 | 7 | 2.5 | 4-05-05 | synthetic | STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN | J.B.MA,Y.R.YUAN,G.MEISTER,Y.PEI,T.TUSCHL,D.J.PATEL | |
3MDI | FR3D | 6 | 1 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UGUAAA | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
1I9K | FR3D | 24 | 3 | SOLUTION NMR | 5-30-01 | synthetic | THE RNA I-MOTIF | K.SNOUSSI,S.NONIN-LECOMTE,J.L.LEROU | |
3G9Y | FR3D | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
3MDG | FR3D | 6 | 1 | 2.2 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UUGUAU | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | 3Q2T |
377D | FR3D | 20 | 8 | 1.8 | 8-10-98 | synthetic | '-R(*CP*GP*UP*AP*CP*DG)-3' | R.BISWAS,S.N.MITRA,M.SUNDARALINGAM | |
1KOS | FR3D | 120 | 40 | SOLUTION NMR | 10-22-99 | synthetic | SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION | K.M.KOSHLAP,R.GUENTHER,E.SOCHACKA,A.MALKIEWICZ,P.F.AGRIS | |
1N38 | FR3D | 7 | 2 | 2.8 | 12-25-02 | synthetic | REOVIRUS POLYMERASE LAMBDA3 ELONGATION COMPLEX WITH ONE PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | |
1P79 | FR3D | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
2O83 | FR3D | 252 | 108 | SOLUTION NMR | 7-10-07 | synthetic | THE STRUCTURE OF TANDEM GA RNA PAIRS WHEN FLANKING PAIRS ARE ISOG-ISOC PAIRS | S.D.KENNEDY,D.H.TURNER | 1LUX 1LUU |
2AWE | FR3D | 39 | 24 | 2.1 | 2-07-06 | engineered | BASE-TETRAD SWAPPING RESULTS IN DIMERIZATION OF RNA QUADRUPLEXES: IMPLICATIONS FOR FORMATION OF I-MOTIF RNA OCTAPLEX | B.PAN,K.SHI,M.SUNDARALINGAM | |
2O32 | FR3D | 280 | 50 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM HUMAN, CONTAINING MODIFIED NUCLEOTIDES | D.G.SASHITAL,V.VENDITTI,C.G.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
1MDG | FR3D | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
2GRB | FR3D | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
1MV6 | FR3D | 42 | 18 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, SHEARED PP PAIRS IN 5'(RGGCPPGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |