PDBID | FR3D analysis | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
3IZ9 | FR3D | 3472 | 1317 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3O58 | FR3D | 3485 | 1088 | 4.0 | 12-15-10 | SACCHAROMYCES CEREVISIAE S288C,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | YEAST 80S RIBOSOME. THIS ENTRY CONSISTS OF THE 60S SUBUNIT OF THE FIRST 80S IN THE ASYMMETRIC UNIT. | A.BEN-SHEM,L.JENNER,G.YUSUPOVA,M.YUSUPOV | 3O5H |
3IZF | FR3D | 3436 | 1231 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME (WITH ES27L-IN CONFORMATION) | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3JYX | FR3D | 3440 | 684 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 60S RRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
3PYO | FR3D | 2879 | 1288 | 3.5 | 2-09-11 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 FROM THE PSIV IGR IRES RNA BOUND TO THE 70S RIBOSOME. THIS FILE CONTAINS THE 50S SUBUNIT OF THE FIRST 70S RIBOSOME. | J.ZHU,A.KOROSTELEV,D.COSTANTINO,H.F.NOLLER,J.S.KIEFT | 2XG2 2Y19 2XTG 3FIN 2Y17 2J03 3D5D 3I9C 2WDJ 3OH5 2V47 3KIR 2WRR 2WDN 2HGU 3F1F 3OHZ 3MRZ 2WDI 2Y0X 2HGJ 3KNO 2WRJ 3PYR 2Y11 2B66 1VSP 3KIT 3KNK 2WRO 3OI3 3PYV 3KIW 3OHK 2XQE 3HUX 2XUX 2WH2 2X9U 2V49 3I9E 3D5B 2Y15 1VSA 3I8I 2Y0V 3KNI 2WDL 1YL3 2XG0 3MS1 3F1H 3OHJ 3PYT 2B9N 3HUZ 2HGQ 2WH4 2Y0Z 3KIY 3OI1 2X9S 2WRL 3I8F 3OH7 3KNM 2B9P 2J01 2Y13 3OI5 |
2QBG | FR3D | 2958 | 1357 | 3.3 | 9-25-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI IN COMPLEX WITH RIBOSOME RECYCLING FACTOR (RRF). THIS FILE CONTAINS THE 50S SUBUNIT OF THE SECOND 70S RIBOSOME, WITH RRF BOUND. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | M.A.BOROVINSKAYA,R.D.PAI,W.ZHANG,B.-S.SCHUWIRTH,J.M.HOLTON, G.HIROKAWA,H.KAJI,A.KAJI,J.H.D.CATE | 3OFC 3OFZ 3ORB 2QOZ 3FIK 2QAM 3IZU 3I1T 3IZT 3OFD 3I20 3DF4 3BBX 3OFR 2Z4N 2VHM 2QP1 3I1N 2WWQ 2QBA 3OAS 1VS8 1VT2 2QBI 2Z4L 2I2T 2VHN 2I2V 2GYA 2QBE 3E1D 3I1R 3OG0 2GYC 2J28 2QOX 2AW4 3DF2 3J01 3I22 3E1B 1VS6 2QOV 3KCR 2AWB 3OAT 2QAO 3OFQ 2QBK 3I1P 2QBC |
1C2W | FR3D | 2891 | 846 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
1PNU | FR3D | 2943 | 938 | 8.7 | 7-15-03 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF A STREPTOMYCIN DEPENDENT RIBOSOME FROM ESCHERICHIA COLI, 50S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNU, CONTAINS ONLY MOLECULES OF THE 50S RIBOSOMAL SUBUNIT. THE 30S SUBUNIT, MRNA, P-SITE TRNA, AND A-SITE TRNA ARE IN THE PDB FILE 1PNS. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VP0 1VOW 1PNY 1VOR 1VOY 1VOU |
2ZJR | FR3D | 2808 | 1180 | 2.9 | 6-17-08 | DEINOCOCCUS RADIODURANS,DEINOCOCCUS RADIODURANS | REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS | J.M.HARMS,D.N.WILSON,F.SCHLUENZEN,S.R.CONNELL,T.STACHELHAUS, Z.ZABOROWSKA,C.M.T.SPAHN,P.FUCINI | 2O43 1JZZ 2AAR 1OND 1J5A 3FWO 2OGM 3DLL 2D3O 2O44 2ZJP 3PIP 1NWX 1K01 1NJO 1P9X 2OGN 1NWY 1Z58 2O45 1NJM 1NJP 2ZJQ 2OGO 1NKW 3JQ4 1JZY 3PIO 1Y69 1XBP 1JZX 1SM1 1NJN 3CF5 |
1S1I | FR3D | 2916 | 1316 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1I, CONTAINS 60S SUBUNIT. THE 40S RIBOSOMAL SUBUNIT IS IN FILE 1S1H. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1S72 | FR3D | 2871 | 1376 | 2.4 | 6-15-04 | HALOARCULA MARISMORTUI,HALOARCULA MARISMORTUI | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | D.J.KLEIN,T.M.SCHMEING,P.B.MOORE,T.A.STEITZ | 1VQK 2QEX 1VQ4 1NJI 1K9M 3CCL 1VQO 1Q86 3CCQ 1M90 3CD6 1VQ8 1KC8 1K73 1Q82 3I55 3CC7 1YJW 1M1K 1KQS 2OTJ 1K8A 1W2B 3CCM 1VQ7 1VQ9 1QVG 1YI2 3I56 3CC4 3G71 1VQN 3CMA 3CCJ 3G4S 1N8R 3CCS 1YHQ 1VQ6 1VQM 2OTL 1FFZ 1JJ2 2QA4 3CCV 1FG0 1YJ9 3CPW 1Q7Y 1QVF 1YIJ 1FFK 3CCR 1Q81 1VQL 3CXC 1VQ5 3CCE 3CC2 1KD1 1VQP 1YIT 3G6E 3CME 3CCU 1YJN |
3BBO | FR3D | 2952 | 824 | 9.4 | 5-27-08 | SPINACEA OLERACEA,SPINACEA OLERACEA,SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 50S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
3O30 | FR3D | 1789 | 482 | 4.0 | 12-15-10 | SACCHAROMYCES CEREVISIAE | YEAST 80S RIBOSOME. THIS ENTRY CONSISTS OF THE 40S SUBUNIT OF THE SECOND 80S IN THE ASYMMETRIC UNIT. | A.BEN-SHEM,L.JENNER,G.YUSUPOVA,M.YUSUPOV | 3O2Z |
3JYV | FR3D | 1820 | 506 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 40S RRNA AND PROTEINS AND P/E TRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
2XZM | FR3D | 1745 | 555 | 3.9 | 1-19-11 | TETRAHYMENA THERMOPHILA | CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1 | J.RABL,M.LEIBUNDGUT,S.F.ATAIDE,A.HAAG,N.BAN | 2XZN |
2AW7 | FR3D | 1530 | 686 | 3.5 | 11-08-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF THE SECOND 70S RIBOSOME. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | B.S.SCHUWIRTH,M.A.BOROVINSKAYA,C.W.HAU,W.ZHANG,A.VILA- SANJURJO,J.M.HOLTON,J.H.D.CATE | 3I1M 3E1C 2QOW 2QP0 1VS7 2Z4K 3J00 2I2P 2WWL 3I1Z 2QBD 3OAQ 2AVY 2I2U 2VHO 2QAN 3FIH 3I1Q 3OFB 2QBF 3IZV 2QBH 3OAR 3ORA 2GYB 3KC4 2VHP 1VS5 3OFX 3E1A 2QBJ 3OR9 3IZW 2QBB 2QAL 3OFA 3I1O 3OFP 3DF1 2GY9 3OFY 3DF3 3I1S 2QB9 3OFO 2Z4M 2QOY 2QOU 3I21 |
1PNX | FR3D | 1533 | 661 | 9.5 | 7-15-03 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE WILD TYPE RIBOSOME FROM E. COLI, 30S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNX, CONTAINS ONLY MOLECULES OF THE 30S RIBOSOMAL SUBUNIT. THE 50S SUBUNIT IS IN THE PDB FILE 1PNY. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VOS 1VOV 1VOZ 1VOX 1VOQ 1PNS |
1FJG | FR3D | 1513 | 690 | 3.0 | 9-25-00 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | A.P.CARTER,W.M.CLEMONS JR.,D.E.BRODERSEN,B.T.WIMBERLY, R.J.MORGAN-WARREN,V.RAMAKRISHNAN | 3KNN 2UUC 2WH3 2HGP 1HR0 2Y0Y 2XQD 1I96 3F1G 3FIC 2X9T 2WRI 2OW8 3I8G 2V46 2WRN 3OHD 2XSY 1I95 2Y12 1N34 3HUY 3OI2 2XG1 1YL4 2UUB 2HHH 2VQF 3KNH 1HNZ 2Y16 3I9D 2Y18 3MR8 3OHY 3MS0 1XMO 1I97 3OGE 2UXB 2VQE 3F1E 2WDM 1HNX 2E5L 2B9M 2XFZ 2Y0W 1IBM 3PYQ 2ZM6 2Y10 2WH1 2UXC 1XNR 3KIX 2UUA 2X9R 1N32 2J00 3PYU 3HUW 1FKA 3PYN 2XUY 3OI0 3KIS 3KNL 1IBL 3D5A 2WRK 3OTO 3OI4 2HGR 2HGI 2WDG 3OGY 1XNQ 2B9O 2Y14 1HNW 2WDK 3D5C 2J02 3KIQ 3OHC 2F4V 3KNJ 1N36 2Y0U 2QNH 3I8H 2V48 1XMQ 1I94 1IBK 3I9B 2B64 3KIU 1N33 1J5E 2WRQ 2UXD 3PYS 2WDH 2UU9 |
3IZ7 | FR3D | 1586 | 477 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3IZE | FR3D | 1582 | 438 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3BBN | FR3D | 1478 | 544 | 9.4 | 5-13-08 | SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME. | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
1S1H | FR3D | 1466 | 626 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1H, CONTAINS 40S SUBUNIT. THE 60S RIBOSOMAL SUBUNIT IS IN FILE 1S1I. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1H1K | FR3D | 1906 | 953 | 10.0 | 9-26-02 | BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA | J.M.DIPROSE,J.M.GRIMES,G.C.SUTTON,J.N.BURROUGHS,A.MEYER, S.MAAN,P.P.C.MERTENS,D.I.STUART | |
3G78 | FR3D | 398 | 181 | 2.8 | 2-16-10 | OCEANOBACILLUS IHEYENSIS,synthetic | INSIGHT INTO GROUP II INTRON CATALYSIS FROM REVISED CRYSTAL STRUCTURE | J.WANG | 3EOH 3EOG 3IGI |
3IZ4 | FR3D | 377 | 105 | 13.6 | 10-20-10 | ESCHERICHIA COLI | MODIFIED E. COLI TMRNA IN THE RESUME STATE WITH THE TRNA-LIKE DOMAIN IN THE RIBOSOMAL P SITE INTERACTING WITH THE SMPB | Y.HASHEM,J.FU,J.FRANK | |
3IYR | FR3D | 349 | 54 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3IYQ | FR3D | 349 | 58 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3BWP | FR3D | 349 | 154 | 3.1 | 4-15-08 | synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICED GROUP II INTRON | N.TOOR,K.S.KEATING,S.D.TAYLOR,A.M.PYLE | |
3Q1Q | FR3D | 423 | 171 | 3.8 | 3-09-11 | synthetic,synthetic | STRUCTURE OF A BACTERIAL RIBONUCLEASE P HOLOENZYME IN COMPLEX WITH TRNA | N.J.REITER,A.OSTERMAN,A.TORRES-LARIOS,K.K.SWINGER,T.PAN,A.MONDRAGON | 3Q1R |
2A64 | FR3D | 298 | 117 | 3.3 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF BACTERIAL RIBONUCLEASE P RNA | A.V.KAZANTSEV,A.A.KRIVENKO,D.J.HARRINGTON,S.R.HOLBROOK, P.D.ADAMS,N.R.PACE | |
2J37 | FR3D | 408 | 164 | 8.0 | 11-08-06 | HALOARCULA MARISMORTUI,TRITICUM SP. | MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS | M.HALIC,M.BLAU,T.BECKER,T.MIELKE,M.R.POOL,K.WILD,I.SINNING, R.BECKMANN | |
2A2E | FR3D | 266 | 100 | 3.9 | 9-06-05 | synthetic | CRYSTAL STRUCTURE OF THE RNA SUBUNIT OF RIBONUCLEASE P. BACTERIAL A-TYPE. | A.TORRES-LARIOS,K.K.SWINGER,A.S.KRASILNIKOV,T.PAN, A.MONDRAGON | |
1X8W | FR3D | 242 | 95 | 3.8 | 11-09-04 | synthetic | STRUCTURE OF THE TETRAHYMENA RIBOZYME: BASE TRIPLE SANDWICH AND METAL ION AT THE ACTIVE SITE | F.GUO,A.R.GOODING,T.R.CECH | 1GRZ |
1Y0Q | FR3D | 233 | 89 | 3.6 | 12-21-04 | STAPHYLOCOCCUS PHAGE TWORT,synthetic | CRYSTAL STRUCTURE OF AN ACTIVE GROUP I RIBOZYME-PRODUCT COMPLEX | B.L.GOLDEN,H.KIM,E.CHASE | 2RKJ |
3DHS | FR3D | 215 | 80 | 3.6 | 1-27-09 | synthetic | MAPPING METAL-BINDING SITES IN THE CATALYTIC DOMAIN OF BACTERIAL RNASE P RNA | N.R.PACE,A.V.KAZANTSEV,A.A.KRIVENKO | |
1U6B | FR3D | 219 | 108 | 3.1 | 8-10-04 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS | P.L.ADAMS,M.R.STAHLEY,A.B.KOSEK,J.WANG,S.A.STROBEL | 1ZZN 3IIN 3BO4 3BO3 3BO2 |
2NOQ | FR3D | 317 | 115 | 7.3 | 11-21-06 | synthetic,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA | M.SCHULER,S.R.CONNELL,A.LESCOUTE,J.GIESEBRECHT,M.DABROWSKI, B.SCHROEER,T.MIELKE,P.A.PENCZEK,E.WESTHOF,C.M.T.SPAHN | |
3DIR | FR3D | 172 | 81 | 2.9 | 9-16-08 | synthetic | CRYSTALLIZATION OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO N6-1-IMINOETHYL-L-LYSINE | A.A.SERGANOV | 3DIS 3DIL 3DIZ 3DJ2 3DIM 3DIQ 3DIX 3DIO 3DIG 3DJ0 3DIY |
3P49 | FR3D | 169 | 48 | 3.5 | 4-06-11 | synthetic | CRYSTAL STRUCTURE OF A GLYCINE RIBOSWITCH FROM FUSOBACTERIUM NUCLEATUM | E.B.BUTLER,J.WANG,Y.XIONG,S.STROBEL | |
3D0U | FR3D | 161 | 76 | 2.8 | 7-01-08 | synthetic | CRYSTAL STRUCTURE OF LYSINE RIBOSWITCH BOUND TO LYSINE | A.D.GARST,A.HEROUX,R.P.RAMBO,R.T.BATEY | 3D0X |
2QBZ | FR3D | 153 | 73 | 2.6 | 9-18-07 | synthetic | STRUCTURE OF THE M-BOX RIBOSWITCH APTAMER DOMAIN | C.E.DANN III,W.C.WINKLER | 3PDR |
1GID | FR3D | 316 | 153 | 2.5 | 12-31-96 | SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING | J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN,C.E.KUNDROT, T.R.CECH,J.A.DOUDNA | 1L8V 1HR2 2R8S |
1U9S | FR3D | 155 | 73 | 2.9 | 10-26-04 | synthetic | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P OF THE A-TYPE | A.S.KRASILNIKOV,Y.XIAO,T.PAN,A.MONDRAGON | |
1NBS | FR3D | 270 | 114 | 3.1 | 2-18-03 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA | A.S.KRASILNIKOV,X.YANG,T.PAN,A.MONDRAGON | |
2NZ4 | FR3D | 594 | 238 | 2.5 | 1-16-07 | synthetic,synthetic | STRUCTURAL INVESTIGATION OF THE GLMS RIBOZYME BOUND TO ITS CATALYTIC COFACTOR | J.C.COCHRANE | 3G9C 3L3C 3G8S 3G8T 3G96 |
3IZD | FR3D | 138 | 59 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF. | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3NDB | FR3D | 136 | 59 | 3.0 | 2-23-11 | METHANOCALDOCOCCUS JANNASCHII DSM 2661 | CRYSTAL STRUCTURE OF A SIGNAL SEQUENCE BOUND TO THE SIGNAL RECOGNITION PARTICLE | T.HAINZL,S.HUANG,E.SAUER-ERIKSSON | |
3HHN | FR3D | 272 | 113 | 3.0 | 11-24-09 | HOMO SAPIENS | CRYSTAL STRUCTURE OF CLASS I LIGASE RIBOZYME SELF-LIGATION PRODUCT, IN COMPLEX WITH U1A RBD | D.M.SHECHNER,R.A.GRANT,S.C.BAGBY,D.P.BARTEL | |
2IL9 | FR3D | 267 | 49 | 3.1 | 2-13-07 | synthetic | CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS | J.S.PFINGSTEN,D.A.COSTANTINO,J.S.KIEFT | |
3IVK | FR3D | 256 | 114 | 3.1 | 3-02-10 | synthetic | CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF AN RNA POLYMERASE RIBOZYME COMPLEXED WITH AN ANTIGEN BINDING ANTIBODY FRAGMENT | Y.KOLDOBSKAYA,E.M.DUGUID,D.M.SHECHNER,S.KOIDE, A.A.KOSSIAKOFF,D.P.BARTEL,J.A.PICCIRILLI | |
1MFQ | FR3D | 127 | 53 | 3.1 | 9-20-02 | HOMO SAPIENS | CRYSTAL STRUCTURE ANALYSIS OF A TERNARY S-DOMAIN COMPLEX OF HUMAN SIGNAL RECOGNITION PARTICLE | A.KUGLSTATTER,C.OUBRIDGE,K.NAGAI | 2GO5 1RY1 1L9A |
2HO7 | FR3D | 141 | 64 | 2.9 | 9-26-06 | synthetic,synthetic | PRE-CLEAVAGE STATE OF THE THERMOANAEROBACTER TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSE-6-PHOSPHATE | D.J.KLEIN,A.R.FERRE-D'AMARE | 3B4A 2H0Z 2H0X 2GCV 2HO6 2GCS 3B4C 2Z74 2Z75 2H0S 3B4B 2H0W |
1C2X | FR3D | 120 | 35 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
3NPB | FR3D | 119 | 46 | 3.0 | 11-03-10 | BACILLUS SUBTILIS | TL5 RNA STRUCTURE | C.LU | |
3IZZ | FR3D | 337 | 122 | 10.8 | 3-30-11 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | MODELS FOR RIBOSOME COMPONENTS THAT ARE NEAREST NEIGHBORS TO THE BOVINE MITOCHONDRIAL INITIATION FACTOR2 BOUND TO THE E. COLI RIBOSOME | A.S.YASSIN,E.HAQUE,P.P.DATTA,K.ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
1FOQ | FR3D | 545 | 200 | 20.0 | 12-22-00 | BACILLUS PHAGE PHI29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | A.A.SIMPSON,Y.TAO,P.G.LEIMAN,M.O.BADASSO,Y.HE,P.J.JARDINE, N.H.OLSON,M.C.MORAIS,S.GRIMES,D.L.ANDERSON,T.S.BAKER, M.G.ROSSMANN | |
3KTV | FR3D | 215 | 80 | 3.8 | 2-16-10 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF THE HUMAN SRP19/S-DOMAIN SRP RNA COMPLEX | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
3F2Q | FR3D | 107 | 49 | 3.0 | 1-27-09 | synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO FMN | A.A.SERGANOV,L.HUANG | 3F2Y 3F2T 3F2W 3F30 3F2X |
2KRL | FR3D | 102 | 22 | SOLUTION NMR; SOLUTION SCATTERING | 2-09-11 | TURNIP CRINKLE VIRUS | THE ENSEMBLE OF THE SOLUTION GLOBAL STRUCTURES OF THE 102-NT RIBOSOME BINDING STRUCTURE ELEMENT OF THE TURNIP CRINKLE VIRUS 3' UTR RNA | X.ZUO,J.WANG,P.YU,D.EYLER,H.XU,M.STARICH,D.TIEDE,A.SIMON,W.KASPRZAK, C.SCHWIETERS,B.SHAPIRO | |
2XXA | FR3D | 204 | 80 | 3.9 | 3-02-11 | DEINOCOCCUS RADIODURANS | THE CRYSTAL STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE (SRP) IN COMPLEX WITH ITS RECEPTOR(SR) | S.F.ATAIDE,N.SCHMITZ,K.SHEN,A.KE,S.SHAN,J.A.DOUDNA,N.BAN | |
1S9S | FR3D | 2020 | 754 | SOLUTION NMR | 4-06-04 | synthetic | SOLUTION STRUCTURE OF MLV PSI SITE | V.D'SOUZA,A.DEY,D.HABIB,M.F.SUMMERS | |
1LNG | FR3D | 97 | 44 | 2.3 | 6-07-02 | METHANOCALDOCOCCUS JANNASCHII | CRYSTAL STRUCTURE OF THE SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII | T.HAINZL,S.HUANG,A.E.SAUER-ERIKSSON | 2V3C 1Z43 |
1YSH | FR3D | 162 | 65 | 9.5 | 7-05-05 | synthetic,synthetic,synthetic | LOCALIZATION AND DYNAMIC BEHAVIOR OF RIBOSOMAL PROTEIN L30E | M.HALIC,T.BECKER,J.FRANK,C.M.SPAHN,R.BECKMANN | |
3KTW | FR3D | 96 | 35 | 3.2 | 2-16-10 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE SRP19/S-DOMAIN SRP RNA COMPLEX OF SULFOLOBUS SOLFATARICUS | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
2XKV | FR3D | 96 | 9 | 13.5 | 12-15-10 | ESCHERICHIA COLI | ATOMIC MODEL OF THE SRP-FTSY EARLY CONFORMATION | L.F.ESTROZI,D.BOEHRINGER,S.-O.SHAN,N.BAN,C.SCHAFFITZEL | |
2OM7 | FR3D | 455 | 151 | 7.3 | 1-15-08 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS | S.R.CONNELL,D.N.WILSON,M.ROST,M.SCHUELER,J.GIESEBRECHT, M.DABROWSKI,T.MIELKE,P.FUCINI,C.M.T.SPAHN | |
2GIS | FR3D | 94 | 44 | 2.9 | 7-04-06 | synthetic | STRUCTURE OF THE S-ADENOSYLMETHIONINE RIBOSWITCH MRNA REGULATORY ELEMENT | R.K.MONTANGE,R.T.BATEY | 3GX6 3GX3 3IQR 3GX2 3IQP 3GX7 3IQN 3GX5 |
1U6P | FR3D | 2000 | 727 | SOLUTION NMR | 11-02-04 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE OF THE MLV ENCAPSIDATION SIGNAL BOUND TO THE NUCLEOCAPSID PROTEIN | V.D'SOUZA,M.F.SUMMERS | |
3IWN | FR3D | 93 | 35 | 3.2 | 11-10-09 | synthetic | CO-CRYSTAL STRUCTURE OF A BACTERIAL C-DI-GMP RIBOSWITCH | N.KULSHINA,N.J.BAIRD,A.R.FERRE-D'AMARE | |
3ADD | FR3D | 176 | 73 | 2.4 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 3) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | 3ADB |
3CUL | FR3D | 182 | 67 | 2.8 | 6-24-08 | engineered,HOMO SAPIENS | AMINOACYL-TRNA SYNTHETASE RIBOZYME | H.XIAO,H.MURAKAMI,H.SUGA,A.R.FERRE-D'AMARE | 3CUN |
1M5O | FR3D | 224 | 94 | 2.2 | 10-12-02 | synthetic,synthetic | TRANSITION STATE STABILIZATION BY A CATALYTIC RNA | P.B.RUPERT,A.P.MASSEY,S.T.SIGURDSSON,A.R.FERRE-D'AMARE | 1M5V 1M5P 1M5K |
3ADC | FR3D | 180 | 70 | 2.9 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 2) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | |
3MUR | FR3D | 91 | 38 | 3.0 | 8-25-10 | synthetic | CRYSTAL STRUCTURE OF THE C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI- GMP | S.A.STROBEL,K.D.SMITH | 3MXH 3MUM 3IRW 3MUV 3MUT |
1WZ2 | FR3D | 176 | 66 | 3.2 | 9-06-05 | synthetic | THE CRYSTAL STRUCTURE OF LEUCYL-TRNA SYNTHETASE AND TRNA(LEUCINE) COMPLEX | R.FUKUNAGA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1DUH | FR3D | 88 | 38 | 2.7 | 5-08-00 | synthetic | CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA | L.JOVINE,T.HAINZL,C.OUBRIDGE,W.G.SCOTT,J.LI,T.K.SIXMA, A.WONACOTT,T.SKARZYNSKI,K.NAGAI | |
3OWZ | FR3D | 168 | 79 | 3.0 | 12-29-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN IRIDIUM | L.HUANG,A.SERGANOV,D.J.PATEL | 3OXB 3OXJ 3OXM 3OWI 3OWW 3OX0 3OXE 3OXD |
3A3A | FR3D | 86 | 34 | 3.1 | 8-11-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN SELENOCYSTINE TRNA | Y.ITOH,S.CHIBA,S.I.SEKINE,S.YOKOYAMA | 3HL2 |
3K0J | FR3D | 166 | 70 | 3.1 | 12-22-09 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI THIM RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE AND THE U1A CRYSTALLIZATION MODULE | N.KULSHINA,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
2ZZM | FR3D | 84 | 27 | 2.6 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNALEU | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
3AM1 | FR3D | 81 | 34 | 2.4 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF PROTEIN | Y.ARAISO,R.ISHITANI,O.NUREKI | |
2GDI | FR3D | 156 | 74 | 2.0 | 7-04-06 | synthetic | CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE | A.SERGANOV | |
2BTE | FR3D | 156 | 69 | 2.9 | 9-15-05 | THERMUS THERMOPHILUS | THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE | S.CUSACK,M.TUKALO,A.YAREMCHUK,R.FUKUNAGA,S.YOKOYAMA | 2V0G 2BYT |
1P5P | FR3D | 77 | 28 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN II (MINIMIZED AVERAGE STRUCTURE) | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | 1P5O |
3D2V | FR3D | 154 | 71 | 2.0 | 7-01-08 | ARABIDOPSIS THALIANA | STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE | S.THORE,C.FRICK,N.BAN | 2CKY 3D2X 3D2G |
1J2B | FR3D | 148 | 40 | 3.3 | 5-27-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE COMPLEXED WITH LAMBDA-FORM TRNA(VAL) | R.ISHITANI,O.NUREKI,N.NAMEKI,N.OKADA,S.NISHIMURA,S.YOKOYAMA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1H3E | FR3D | 77 | 31 | 2.9 | 10-27-02 | THERMUS THERMOPHILUS | TYROSYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH WILD-TYPE TRNATYR(GUA) AND WITH ATP AND TYROSINOL | S.CUSACK,A.YAREMCHUK,I.KRIKLIVYI,M.TUKALO | |
3A2K | FR3D | 154 | 52 | 3.6 | 10-20-09 | synthetic | CRYSTAL STRUCTURE OF TILS COMPLEXED WITH TRNA | K.NAKANISHI,L.BONNEFOND,R.ISHITANI,O.NUREKI | |
1I9V | FR3D | 73 | 29 | 2.6 | 6-04-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX | N.E.MIKKELSEN,K.JOHANSSON,A.VIRTANEN,L.A.KIRSEBOM | 1ZO3 1ZO1 |
1EIY | FR3D | 76 | 27 | 3.3 | 3-06-00 | THERMUS THERMOPHILUS HB8 | THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE | Y.GOLDGUR,L.MOSYAK,L.RESHETNIKOVA,V.ANKILOVA,M.SAFRO | 2IY5 |
2HOJ | FR3D | 74 | 33 | 2.5 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO THIAMINE PYROPHOSPHATE, MANGANESE IONS | T.E.EDWARDS,A.R.FERRE-D'AMARE | 2HOO 2HOM 2HOL 2HOK |
2K4C | FR3D | 76 | 30 | SOLUTION NMR; SOLUTION SCATTERING | 12-09-08 | ESCHERICHIA COLI | TRNAPHE-BASED HOMOLOGY MODEL FOR TRNAVAL REFINED AGAINST BASE N-H RDCS IN TWO MEDIA AND SAXS DATA | A.GRISHAEV,J.YING,M.D.CANNY,A.PARDI,A.BAX | |
3IZY | FR3D | 76 | 4 | 10.8 | 3-23-11 | BOS TAURUS | MAMMALIAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 2 | A.S.YASSIN,E HAQUE,P.P DATTA,K ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
2NR0 | FR3D | 272 | 99 | 3.9 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
3DEG | FR3D | 298 | 113 | 10.0 | 8-19-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP | S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI, K.H.NIERHAUS,C.M.T.SPAHN | 2FMT 3CW5 3CW6 |
2CV1 | FR3D | 150 | 65 | 2.4 | 9-05-06 | synthetic | GLUTAMYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA(GLU), ATP, AND AN ANALOG OF L-GLUTAMATE: A QUATERNARY COMPLEX | S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2DXI 2CV2 1G59 1N77 1N78 2CV0 |
2ZUE | FR3D | 75 | 29 | 2.0 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII ARGINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(ARG) AND AN ATP ANALOG (ANP) | M.KONNO,T.SUMIDA,E.UCHIKAWA,Y.MORI,T.YANAGISAWA,S.SEKINE, S.YOKOYAMA | 2ZUF |
2CT8 | FR3D | 148 | 53 | 2.7 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS METHIONYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(MET) AND METHIONYL-ADENYLATE ANOLOGUE | K.NAKANISHI,Y.OGISO,T.NAKAMA,S.FUKAI,O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2CSX |
2IHX | FR3D | 1500 | 537 | SOLUTION NMR | 1-16-07 | ROUS SARCOMA VIRUS | SOLUTION STRUCTURE OF THE ROUS SARCOMA VIRUS NUCLEOCAPSID PROTEIN:UPSI RNA PACKAGING SIGNAL COMPLEX | J.ZHOU,M.SUMMERS | |
2AKE | FR3D | 72 | 21 | 3.1 | 7-11-06 | BOS TAURUS | STRUCTURE OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE IN COMPLEX WITH TRNA(TRP) | N.SHEN,L.GUO,B.YANG,Y.JIN,J.DING | 2DR2 |
1QU2 | FR3D | 75 | 31 | 2.2 | 8-31-99 | STAPHYLOCOCCUS AUREUS | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | L.F.SILVIAN,J.WANG,T.A.STEITZ | 1QU3 1FFY |
1GAX | FR3D | 150 | 60 | 2.9 | 12-06-00 | synthetic | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE | S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,J.TAO,D.G.VASSYLYEV, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 1IVS |
1O0C | FR3D | 74 | 31 | 2.7 | 4-15-03 | synthetic | CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | T.L.BULLOCK,J.J.PERONA | 1QRS 1GTS 2RE8 1ZJW 1QRT 1EXD 1EUQ 1EUY 1QTQ 1QRU 1GTR 1O0B 2RD2 |
1VBY | FR3D | 73 | 30 | 2.9 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE HEPATITIS DELTA VIRUS GEMONIC RIBOZYME PRECURSOR, WITH C75U MUTAION, AND MN2+ BOUND | A.KE,K.ZHOU,F.DING,J.H.D.CATE,J.A.DOUDNA | 1SJ4 1SJ3 1VC7 1VC6 1VC5 1VBX 1VC0 1SJF 1DRZ 2OIH 1VBZ 2OJ3 1CX0 |
1J1U | FR3D | 74 | 31 | 1.9 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEAL TYROSYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(TYR) AND L-TYROSINE | T.KOBAYASHI,O.NUREKI,R.ISHITANI,M.TUKALO,S.CUSACK, K.SAKAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3FOZ | FR3D | 143 | 58 | 2.5 | 1-20-09 | synthetic,synthetic | STRUCTURE OF E. COLI ISOPENTENYL-TRNA TRANSFERASE IN COMPLEX WITH E. COLI TRNA(PHE) | E.SEIF,B.M.HALLBERG | 2ZM5 2ZXU |
2DER | FR3D | 145 | 55 | 3.1 | 8-15-06 | synthetic | COCRYSTAL STRUCTURE OF AN RNA SULFURATION ENZYME MNMA AND TRNA-GLU IN THE INITIAL TRNA BINDING STATE | T.NUMATA,Y.IKEUCHI,S.FUKAI,T.SUZUKI,O.NUREKI | 2DEU 2DET |
3AL0 | FR3D | 74 | 30 | 3.4 | 9-29-10 | synthetic | CRYSTAL STRUCTURE OF THE GLUTAMINE TRANSAMIDOSOME FROM THERMOTOGA MARITIMA IN THE GLUTAMYLATION STATE. | T.ITO,S.YOKOYAMA | 3AKZ |
1U0B | FR3D | 74 | 30 | 2.3 | 11-23-04 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF CYSTEINYL-TRNA SYNTHETASE BINARY COMPLEX WITH TRNACYS | S.HAUENSTEIN,C.M.ZHANG,Y.M.HOU,J.J.PERONA | |
2D6F | FR3D | 146 | 50 | 3.1 | 7-11-06 | synthetic | CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN) | O.NUREKI | |
3L0U | FR3D | 73 | 30 | 3.0 | 3-16-10 | synthetic | THE CRYSTAL STRUCTURE OF UNMODIFIED TRNAPHE FROM ESCHERICHIA COLI | R.T.BYRNE,A.L.KONEVEGA,M.V.RODNINA,A.A.ANTSON | |
2AZX | FR3D | 144 | 60 | 2.8 | 8-01-06 | synthetic | CHARGED AND UNCHARGED TRNAS ADOPT DISTINCT CONFORMATIONS WHEN COMPLEXED WITH HUMAN TRYPTOPHANYL-TRNA SYNTHETASE | X.L.YANG,F.J.OTERO,K.L.EWALT,J.LIU,M.A.SWAIRJO,C.KOHRER, U.L.RAJBHANDARY,R.J.SKENE,D.E.MCREE,P.SCHIMMEL | |
2ZNI | FR3D | 144 | 52 | 3.1 | 12-30-08 | synthetic | CRYSTAL STRUCTURE OF PYRROLYSYL-TRNA SYNTHETASE-TRNA(PYL) COMPLEX FROM DESULFITOBACTERIUM HAFNIENSE | K.NOZAWA,Y.ARAISO,D.SOLL,R.ISHITANI,O.NUREKI | |
1Y26 | FR3D | 71 | 35 | 2.1 | 12-28-04 | VIBRIO VULNIFICUS | A-RIBOSWITCH-ADENINE COMPLEX | A.SERGANOV,Y.R.YUAN,D.J.PATEL | |
2DU3 | FR3D | 71 | 26 | 2.6 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE COMPLEXED WITH TRNACYS AND O-PHOSPHOSERINE | R.FUKUNAGA | 2DU4 2DU5 2DU6 |
3KFU | FR3D | 278 | 110 | 3.0 | 8-25-10 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF THE TRANSAMIDOSOME | M.BLAISE,M.BAILLY,M.FRECHIN,S.THIRUP,H.D.BECKER,D.KERN | |
2L3J | FR3D | 1349 | 588 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | THE SOLUTION STRUCTURE OF THE ADAR2 DSRBM-RNA COMPLEX REVEALS A SEQUENCE-SPECIFIC READ OUT OF THE MINOR GROOVE | R.STEFL,F.C.OBERSTRASS,F.H.-T.ALLAIN | |
2ZZN | FR3D | 142 | 58 | 3.0 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNACYS | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
2OIU | FR3D | 142 | 62 | 2.6 | 3-13-07 | synthetic | L1 RIBOZYME LIGASE CIRCULAR ADDUCT | M.P ROBERTSON,W.G.SCOTT | |
3LA5 | FR3D | 71 | 35 | 1.7 | 1-26-10 | BACILLUS SUBTILIS | X-RAY CRYSTAL STRUCTURE OF MC6 RNA RIBOSWITCH BOUND TO AZACYTOSINE | M.S.DUNSTAN,D.LEYS | |
1KXK | FR3D | 70 | 28 | 3.0 | 3-22-02 | synthetic | CRYSTAL STRUCTURE OF A RNA MOLECULE CONTAINING DOMAIN 5 AND 6 OF THE YEAST AI5G GROUP II SELF-SPLICING INTRON | L.ZHANG,J.A.DOUDNA | |
3IVN | FR3D | 138 | 60 | 2.8 | 1-19-10 | BACILLUS SUBTILIS | STRUCTURE OF THE U65C MUTANT A-RIBOSWITCH APTAMER FROM THE BACILLUS SUBTILIS PBUE OPERON | V.DELFOSSE,P.DAGENAIS,D.CHAUSSE,G.DI TOMASSO,P.LEGAULT | |
3EPH | FR3D | 138 | 48 | 3.0 | 11-04-08 | synthetic | CRYSTALLOGRAPHIC SNAPSHOTS OF EUKARYOTIC DIMETHYLALLYLTRANSFERASE ACTING ON TRNA: INSIGHT INTO TRNA RECOGNITION AND REACTION MECHANISM | R.H.HUANG,C.ZHOU | 3EPJ 3EPL 3EPK |
1QF6 | FR3D | 69 | 29 | 2.9 | 5-06-99 | ESCHERICHIA COLI | STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA | R.SANKARANARAYANAN,A.C.DOCK-BREGEON,B.REES,D.MORAS | |
3MOJ | FR3D | 69 | 26 | 2.9 | 8-04-10 | ESCHERICHIA COLI | STRUCTURE OF THE RNA BINDING DOMAIN OF THE BACILLUS SUBTILIS YXIN PROTEIN COMPLEXED WITH A FRAGMENT OF 23S RIBOSOMAL RNA | J.W.HARDIN,Y.HU,D.B.MCKAY | |
2HOP | FR3D | 69 | 23 | 3.3 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO PYRITHIAMINE | T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1GIX | FR3D | 198 | 71 | 5.5 | 5-04-01 | THERMUS THERMOPHILUS,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIX, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY | M.M.YUSUPOV,G.Z.YUSUPOVA,A.BAUCOM,K.LIEBERMAN,T.N.EARNEST, J.H.D.CATE,H.F.NOLLER | 1JGQ 1JGO 1JGP |
1C0A | FR3D | 68 | 25 | 2.4 | 11-23-99 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE : TRNAASP : ASPARTYL-ADENYLATE COMPLEX | S.EILER,A.-C.DOCK-BREGEON,L.MOULINIER,J.-C.THIERRY,D.MORAS | |
2QUS | FR3D | 136 | 48 | 2.4 | 7-15-08 | synthetic | HAMMERHEAD RIBOZYME G12A MUTANT PRE-CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | |
3HAY | FR3D | 81 | 27 | 5.0 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND FULL H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1IL2 | FR3D | 129 | 56 | 2.6 | 9-28-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE:YEAST TRNAASP:ASPARTYL-ADENYLATE COMPLEX | L.MOULINIER,S.EILER,G.ERIANI,J.GANGLOFF,J.C.THIERRY, K.GABRIEL,W.H.MCCLAIN,D.MORAS | 1ASZ 1ASY |
3FO4 | FR3D | 63 | 32 | 1.9 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-CHLOROGUANINE | S.D.GILBERT,R.T.BATEY | 2EES 2EEW 3FO6 2XNZ 1Y27 3DS7 2EET 3G4M 3GAO 2G9C 2B57 3GOT 3GES 2EEU 3GOG 1U8D 2EEV 3GER |
3BBV | FR3D | 67 | 21 | 10.0 | 10-21-08 | THERMUS THERMOPHILUS | THE TRNA(PHE) FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX | L.JIANG,J.P.ABRAHAMS | |
1B23 | FR3D | 66 | 23 | 2.6 | 12-07-98 | ESCHERICHIA COLI | E. COLI CYSTEINYL-TRNA AND T. AQUATICUS ELONGATION FACTOR EF-TU:GTP TERNARY COMPLEX | P.NISSEN,M.KJELDGAARD,S.THIRUP,J.NYBORG | |
2L1F | FR3D | 2620 | 1069 | SOLUTION NMR | 10-27-10 | MOLONEY MURINE LEUKEMIA VIRUS,MOLONEY MURINE LEUKEMIA VIRUS | STRUCTURE OF A CONSERVED RETROVIRAL RNA PACKAGING ELEMENT BY NMR SPECTROSCOPY AND CRYO-ELECTRON TOMOGRAPHY | M.F.SUMMERS,R.N.IROBALIEVA,B.TOLBERT,A.SMALLS-MANTY,K.IYALLA, K.LOELIGER,V.D'SOUZA,H.KHANT,M.SCHMID,E.GARCIA,A.TELESNITSKY,W.CHIU, Y.MIYAZAKI | |
3R4F | FR3D | 66 | 23 | 3.5 | 4-20-11 | synthetic | PROHEAD RNA | F.DING,C.LU,W.ZHANO,K.R.RAJASHANKAR,D.L.ANDERSON,P.J.JARDINE, S.GRIMES,A.KE | |
2TRA | FR3D | 65 | 28 | 3.0 | 11-06-87 | SACCHAROMYCES CEREVISIAE | RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS | E.WESTHOF,P.DUMAS,D.MORAS | 3TRA |
1H4S | FR3D | 65 | 26 | 2.9 | 6-18-01 | THERMUS THERMOPHILUS | PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE | A.YAREMCHUK,M.TUKALO,S.CUSACK | 1H4Q |
2NQP | FR3D | 65 | 21 | 3.5 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
486D | FR3D | 195 | 79 | 7.5 | 10-04-99 | THERMUS THERMOPHILUS,ESCHERICHIA COLI,SACCHAROMYCES CEREVISIAE,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,synthetic,synthetic | X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES | J.H.CATE,M.M.YUSUPOV,G.ZH.YUSUPOVA,T.N.EARNEST,H.F.NOLLER | |
3NKB | FR3D | 70 | 31 | 1.9 | 9-01-10 | HOMO SAPIENS | A 1.9A CRYSTAL STRUCTURE OF THE HDV RIBOZYME PRECLEAVAGE SUGGESTS BOTH LEWIS ACID AND GENERAL ACID MECHANISMS CONTRIBUTE TO PHOSPHODIESTER CLEAVAGE | J.-H.CHEN,R.YAJIMA,D.M.CHADALAVADA,E.CHASE,P.C.BEVILACQUA,B.L.GOLDEN | |
3EGZ | FR3D | 64 | 20 | 2.2 | 10-28-08 | synthetic | CRYSTAL STRUCTURE OF AN IN VITRO EVOLVED TETRACYCLINE APTAMER AND ARTIFICIAL RIBOSWITCH | H.XIAO,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1YFG | FR3D | 64 | 23 | 3.0 | 9-03-97 | SACCHAROMYCES CEREVISIAE | YEAST INITIATOR TRNA | R.BASAVAPPA,P.B.SIGLER | |
2WWB | FR3D | 136 | 47 | 6.5 | 12-08-09 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | 2WW9 2WWA |
1F7V | FR3D | 60 | 22 | 2.9 | 6-27-01 | synthetic | CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG | B.DELAGOUTTE,D.MORAS,J.CAVARELLI | 1F7U |
1FCW | FR3D | 310 | 118 | 17.0 | 8-11-00 | SACCHAROMYCES CEREVISIAE | TRNA POSITIONS DURING THE ELONGATION CYCLE | R.K.AGRAWAL,C.M.T.SPAHN,P.PENCZEK,R.A.GRASSUCCI, K.H.NIERHAUS,J.FRANK | 1EHZ 1ML5 1OB2 1MJ1 1TN2 6TNA 4TNA 1EVV 1OB5 1SZ1 1TRA 1TTT 4TRA |
1EFW | FR3D | 126 | 50 | 3.0 | 6-19-00 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF ASPARTYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED TO TRNAASP FROM ESCHERICHIA COLI | C.BRIAND,A.POTERSZMAN,S.EILER,G.WEBSTER,J.-C.THIERRY,D.MORAS | |
3ICQ | FR3D | 122 | 38 | 3.2 | 8-25-09 | synthetic | KARYOPHERIN NUCLEAR STATE | A.G.COOK,N.FUKUHARA,M.JINEK,E.CONTI | |
1FIR | FR3D | 61 | 22 | 3.3 | 1-17-01 | BOS TAURUS | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3) | P.BENAS,P.DUMAS | |
1UN6 | FR3D | 122 | 50 | 3.1 | 11-20-03 | XENOPUS LAEVIS | THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION | D.LU,M.A.SEARLES,A.KLUG | |
1SER | FR3D | 61 | 25 | 2.9 | 4-30-94 | THERMUS THERMOPHILUS | THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER | S.BIOU,V.CUSACK,A.YAREMCHUK,M.TUKALO | |
2CZJ | FR3D | 240 | 69 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TMRNA FROM THERMUS THERMOPHILUS HB8 | Y.BESSHO,R.SHIBATA,S.SEKINE,K.MURAYAMA,M.SHIROUZU, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3HJW | FR3D | 70 | 30 | 2.4 | 6-23-09 | synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | 3LWR 3LWV 3LWQ 3LWP 3LWO |
1QA6 | FR3D | 116 | 54 | 2.8 | 5-25-99 | synthetic | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | G.L.CONN,D.E.DRAPER,E.E.LATTMAN,A.G.GITTIS | 1C04 1Y39 1HC8 |
1MMS | FR3D | 116 | 52 | 2.6 | 4-17-00 | synthetic | CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX | B.T.WIMBERLY,R.GUYMON,J.P.MCCUTCHEON,S.W.WHITE, V.RAMAKRISHNAN | 2JQ7 1OLN |
3HAX | FR3D | 71 | 31 | 2.1 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND GAR1-MINUS H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2QUW | FR3D | 67 | 25 | 2.2 | 7-15-08 | synthetic,synthetic | HAMMERHEAD RIBOZYME G12A MUTANT AFTER CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | |
1F7Y | FR3D | 57 | 24 | 2.8 | 11-22-00 | synthetic | THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | E.ENNIFAR,A.NIKOULINE,A.SERGANOV,S.TISHCHENKO,N.NEVSKAYA, M.GARBER,B.EHRESMANN,C.EHRESMANN,S.NIKONOV,P.DUMAS | 1DK1 1KUQ |
2HVY | FR3D | 57 | 20 | 2.3 | 9-12-06 | synthetic | CRYSTAL STRUCTURE OF AN H/ACA BOX RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2DLC | FR3D | 57 | 20 | 2.4 | 6-12-07 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF YEAST TYROSYL- TRNA SYNTHETASE | M.TSUNODA,Y.KUSAKABE,N.TANAKA,K.T.NAKAMURA | |
3F4G | FR3D | 109 | 51 | 3.0 | 1-27-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO RIBOFLAVIN. | A.A.SERGANOV,L.HUANG | 3F4H 3F4E |
2NRE | FR3D | 56 | 18 | 4.0 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
2KZL | FR3D | 440 | 132 | SOLUTION NMR | 2-23-11 | BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 | SPECIFIER DOMAIN AND GA MOTIF REGION OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG | |
1MZP | FR3D | 55 | 25 | 2.6 | 1-21-03 | synthetic | STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME | A.NIKULIN,I.ELISEIKINA,S.TISHCHENKO,N.NEVSKAYA,N.DAVYDOVA, O.PLATONOVA,W.PIENDL,M.SELMER,A.LILJAS,R.ZIMMERMANN, M.GARBER,S.NIKONOV | |
1P5M | FR3D | 1210 | 416 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIA | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2HGH | FR3D | 1100 | 480 | SOLUTION NMR | 8-01-06 | XENOPUS LAEVIS | TRANSCRIPTION FACTOR IIIA ZINC FINGERS 4-6 BOUND TO 5S RRNA 55MER (NMR STRUCTURE) | B.M.LEE | |
2FK6 | FR3D | 53 | 20 | 2.9 | 3-21-06 | synthetic | CRYSTAL STRUCTURE OF RNASE Z/TRNA(THR) COMPLEX | I.LI DE LA SIERRA-GALLAY,N.MATHY,O.PELLEGRINI,C.CONDON | |
3E5C | FR3D | 52 | 21 | 2.2 | 10-07-08 | synthetic | CRYSTAL STRUCTURE OF THE SMK BOX (SAM-III) RIBOSWITCH WITH SAM | C.LU | 3E5E 3E5F |
2QWY | FR3D | 156 | 62 | 2.8 | 1-22-08 | synthetic | SAM-II RIBOSWITCH BOUND TO S-ADENOSYLMETHIONINE | S.D.GILBERT,R.P.RAMBO,D.VAN TYNE,R.T.BATEY | |
3NPN | FR3D | 50 | 18 | 2.8 | 10-06-10 | RALSTONIA SOLANACEARUM | STRUCTURE OF THE S-ADENOSYLHOMOCYSTEINE RIBOSWITCH AT 3.0A | F.E.REYES,A.E.EDWARDS,R.T.BATEY | 3NPQ |
2PXV | FR3D | 49 | 22 | 2.0 | 8-07-07 | synthetic | VARIANT 6 OF RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT | 2PXK 2PXD 2PXU 2PXQ 2PXF 2PXB 1DUL 2PXT 2PXP 3LQX 2PXE 2PXL 1HQ1 |
1RMN | FR3D | 49 | 19 | FLUORESCENCE TRANSFER | 1-26-95 | synthetic | A THREE-DIMENSIONAL MODEL FOR THE HAMMERHEAD RIBOZYME BASED ON FLUORESCENCE MEASUREMENTS | T.TUSCHL,C.GOHLKE,T.M.JOVIN,E.WESTHOF,F.ECKSTEIN | |
1E8O | FR3D | 49 | 18 | 3.2 | 11-08-00 | HOMO SAPIENS | CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP | O.WEICHENRIEDER,K.WILD,K.STRUB,S.CUSACK | |
1U63 | FR3D | 98 | 40 | 3.4 | 4-12-05 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX | N.NEVSKAYA,S.TISHCHENKO,A.GABDOULKHAKOV,E.NIKONOVA, O.NIKONOV,A.NIKULIN,M.GARBER,S.NIKONOV,W.PIENDL | |
2VPL | FR3D | 94 | 38 | 2.3 | 9-23-08 | METHANOCALDOCOCCUS JANNASCHII | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | V.KLJASHTORNY,S.TISHCHENKO,N.NEVSKAYA,S.NIKONOV,M.GARBER | |
2KUW | FR3D | 528 | 208 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (A-FORM MUTANT IN LOWER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | |
2KUU | FR3D | 576 | 230 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (GC MUTANT IN UPPER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | 2KUR 2KUV 2KE6 |
1YMO | FR3D | 940 | 417 | SOLUTION NMR | 3-15-05 | synthetic | SOLUTION STRUCTURE OF THE P2B-P3 PSEUDOKNOT FROM HUMAN TELOMERASE RNA | C.A.THEIMER,C.A.BLOIS,J.FEIGON | 2K96 2K95 |
1S03 | FR3D | 94 | 42 | 2.7 | 5-25-04 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX | H.J.MERIANOS,J.WANG,P.B.MOORE | |
3CIY | FR3D | 92 | 46 | 3.4 | 5-06-08 | synthetic,MUS MUSCULUS | MOUSE TOLL-LIKE RECEPTOR 3 ECTODOMAIN COMPLEXED WITH DOUBLE- STRANDED RNA | L.LIU,I.BOTOS,Y.WANG,J.N.LEONARD,J.SHILOACH,D.M.SEGAL, D.R.DAVIES | |
1XJR | FR3D | 46 | 20 | 2.7 | 2-01-05 | synthetic | THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME | M.P.ROBERTSON,H.IGEL,R.BAERTSCH,D.HAUSSLER,M.ARES JR., W.G.SCOTT | |
3IAB | FR3D | 46 | 13 | 2.7 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF RNASE P /RNASE MRP PROTEINS POP6, POP7 IN A COMPLEX WITH THE P3 DOMAIN OF RNASE MRP RNA | A.PEREDERINA,O.A.ESAKOVA,C.QUAN,E.KHANOVA,A.S.KRASILNIKOV | |
2NUE | FR3D | 46 | 21 | 2.9 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 2.9-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
1Z2J | FR3D | 900 | 400 | SOLUTION NMR | 6-14-05 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING ELEMENT | D.W.STAPLE,S.E.BUTCHER | 1ZC5 |
1P6V | FR3D | 69 | 17 | 3.2 | 8-12-03 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TRANSFER-MESSENGER RNA IN COMPLEX WITH SMPB | S.GUTMANN,P.W.HAEBEL,L.METZINGER,M.SUTTER,B.FELDEN,N.BAN | |
1QZW | FR3D | 180 | 44 | 4.1 | 11-18-03 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION | K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING | |
1G1X | FR3D | 84 | 32 | 2.6 | 10-30-00 | synthetic,synthetic | STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA | S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT,J.R.WILLIAMSON | |
1A60 | FR3D | 1056 | 312 | SOLUTION NMR | 5-27-98 | TURNIP YELLOW MOSAIC VIRUS | NMR STRUCTURE OF A CLASSICAL PSEUDOKNOT: INTERPLAY OF SINGLE-AND DOUBLE-STRANDED RNA, 24 STRUCTURES | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2ADT | FR3D | 1720 | 921 | SOLUTION NMR | 7-26-05 | synthetic | NMR STRUCTURE OF A 30 KDA GAAA TETRALOOP-RECEPTOR COMPLEX. | J.H.DAVIS,M.TONELLI,L.G.SCOTT,L.JAEGER,J.R.WILLIAMSON, S.E.BUTCHER | 2I7Z 2JYF 2JYJ 2I7E 2JYH |
2FEY | FR3D | 430 | 120 | SOLUTION NMR | 6-27-06 | synthetic | THE STRUCTURE OF STEM LOOP IV OF TETRAHYMENA TELOMERASE RNA | Y.CHEN,J.FENDER,J.D.LEGASSIE,M.B.JARSTFER,T.M.BRYAN,G.VARANI | |
1CQL | FR3D | 430 | 135 | SOLUTION NMR | 1-14-00 | ESCHERICHIA COLI | NMR STRUCTURE OF SRP RNA DOMAIN IV | U.SCHMITZ,T.L.JAMES | 1CQ5 |
2L2J | FR3D | 840 | 373 | SOLUTION NMR | 10-27-10 | HOMO SAPIENS | SOLUTION NMR STRUCTURE OF THE LOWER PART OF THE R/G STEM LOOP RNA | F.F.OBERSTRASS,F.H.-T.ALLAIN,R.STEFL | 2L2K |
2KX8 | FR3D | 42 | 17 | SOLUTION NMR | 9-08-10 | HOMO SAPIENS | NMR STRUCTURE OF STEM-LOOP 4 FROM THE HUMAN 7SK SNRNA IN COMPLEX WITH ARGININE | M.A.DURNEY,V.M.D'SOUZA | |
1MNX | FR3D | 546 | 214 | SOLUTION NMR | 1-14-03 | SPINACIA OLERACEA | THE SOLUTION STRUCTURE OF THE LOOP E REGION OF THE 5S RRNA FROM SPINACH CHLOROPLASTS. | P.VALLURUPALLI,P.B.MOORE | |
2OEU | FR3D | 59 | 24 | 2.0 | 2-20-07 | synthetic,synthetic | FULL-LENGTH HAMMERHEAD RIBOZYME WITH MN(II) BOUND | M.MARTICK,W.G.SCOTT | 2GOZ |
3BNT | FR3D | 42 | 18 | 2.3 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF [CO(NH3)6]CL3 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | |
1KH6 | FR3D | 42 | 16 | 2.9 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF AN RNA TERTIARY DOMAIN ESSENTIAL TO HCV IRES-MEDIATED TRANSLATION INITIATION. | J.S.KIEFT,K.ZHOU,A.GRECH,R JUBIN,J.A.DOUDNA | |
2AU4 | FR3D | 41 | 11 | SOLUTION NMR | 3-28-06 | synthetic | CLASS I GTP APTAMER | J.M.CAROTHERS,J.H.DAVIS,J.J.CHOU,J.W.SZOSTAK | |
1A51 | FR3D | 369 | 142 | SOLUTION NMR | 5-27-98 | ESCHERICHIA COLI | LOOP D/LOOP E ARM OF E. COLI 5S RRNA, NMR, 9 STRUCTURES | A.DALLAS,P.B.MOORE | |
2HUA | FR3D | 440 | 149 | SOLUTION NMR | 4-17-07 | synthetic | SOLUTION STRUCTURE OF CSFV IRES DOMAIN IIA | N.LOCKER,L.E.EASTON,P.J.LUKAVSKY | |
2D1B | FR3D | 78 | 40 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2D1A | FR3D | 78 | 38 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3P22 | FR3D | 190 | 104 | 2.5 | 12-08-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, IN COMPLEX WITH A9 RNA | R.M.MITTON-FRY,S.J.DEGREGORIO,J.WANG,T.A.STEITZ,J.A.STEITZ | |
1YKV | FR3D | 98 | 42 | 3.3 | 2-22-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE | A.SERGANOV,S.KEIPER,L.MALININA,V.TERESHKO,E.SKRIPKIN, C.HOBARTNER,A.POLONSKAIA,A.T.PHAN,R.WOMBACHER,R.MICURA, Z.DAUTER,A.JASCHKE,D.J.PATEL | 1YLS 1YKQ |
1B36 | FR3D | 380 | 106 | SOLUTION NMR | 12-23-98 | SYNTHETIC CONSTRUCT | SOLUTION STRUCTURE OF THE HAIRPIN RIBOZYME LOOP B DOMAIN RNA, NMR, 10 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
2KU0 | FR3D | 380 | 145 | SOLUTION NMR | 4-28-10 | HEPATITIS C VIRUS | INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN IIA RNA | R.B.PAULSEN,P.P.SETH,E.E.SWAYZE,R.H.GRIFFEY,J.J.SKALICKY,T.E.CHEATHAM III,D.R.DAVIS | 2KTZ |
1U3K | FR3D | 380 | 141 | SOLUTION NMR | 7-12-05 | synthetic | THE SOLUTION STRUCTURE OF A SUBSTRATE OF ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES | E.C.POLLOCK,P.B.MOORE | 2A9L 1A9L |
2HW8 | FR3D | 36 | 17 | 2.1 | 12-19-06 | synthetic | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | S.TISHCHENKO,E.NIKONOVA,A.NIKULIN,N.NEVSKAYA,S.VOLCHKOV, W.PIENDL,M.GARBER,S.NIKONOV | 1ZHO |
2ZY6 | FR3D | 38 | 12 | 1.8 | 6-30-09 | synthetic | CRYSTAL STRUCTURE OF A TRUNCATED TRNA, TPHE39A | I.TANAKA,M.YAO,Y.TANAKA,Y.KITAGO,S.YMAGATA | |
1M5L | FR3D | 570 | 227 | SOLUTION NMR | 9-18-02 | synthetic | STRUCTURE OF WILD-TYPE AND MUTANT INTERNAL LOOPS FROM THE SL-1 DOMAIN OF THE HIV-1 PACKAGING SIGNAL | J.GALLEGO,J.GREATOREX,G.VARANI,A.LEVER | |
2KHY | FR3D | 380 | 92 | SOLUTION NMR | 2-16-10 | synthetic | SPECIFIER DOMAIN OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG,T.M.HENKIN | |
1TXS | FR3D | 760 | 338 | SOLUTION NMR | 10-05-04 | synthetic | STEM-LOOP D OF THE CLOVERLEAF DOMAIN OF ENTEROVIRAL 5'UTR RNA | Z.DU,J.YU,N.B.ULYANOV,R.ANDINO,T.L.JAMES | |
1Q8N | FR3D | 950 | 345 | SOLUTION NMR | 3-23-04 | synthetic | SOLUTION STRUCTURE OF THE MALACHITE GREEN RNA BINDING APTAMER | J.FLINDERS,S.C.DEFINA,D.M.BRACKETT,C.BAUGH,C.WILSON, T.DIECKMANN | |
1D6K | FR3D | 740 | 275 | SOLUTION NMR | 11-22-99 | ESCHERICHIA COLI | NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX | M.STOLDT,J.WOHNERT,O.OHLENSCHLAGER,M.GORLACH,L.R.BROWN | |
1KOG | FR3D | 296 | 132 | 3.5 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE INTERACTING WITH THE ESSENTIAL DOMAIN OF ITS MRNA OPERATOR | A.TORRES-LARRIOS,A.C.DOCK-BREGEON,P.ROMBY,B.REES, R.SANKARANARAYANAN,J.CAILLET,M.SPRINGER,C.EHRESMANN, B.EHRESMANN,D.MORAS | |
1I6U | FR3D | 74 | 37 | 2.6 | 8-03-01 | synthetic | RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | S.TISHCHENKO,A.NIKULIN,N.FOMENKOVA,N.NEVSKAYA,O.NIKONOV, P.DUMAS,H.MOINE,B.EHRESMANN,C.EHRESMANN,W.PIENDL,V.LAMZIN, M.GARBER,S.NIKONOV | |
3GS5 | FR3D | 61 | 28 | 2.8 | 4-21-09 | synthetic,synthetic | AN ALL-RNA HAIRPIN RIBOZYME A38N1DA VARIANT WITH A PRODUCT MIMIC SUBSTRATE STRAND | R.C.SPITALE,R.VOLPINI,M.G.HELLER,J.KRUCINSKA,G.CRISTALLI, J.E.WEDEKIND | |
1E95 | FR3D | 540 | 174 | SOLUTION NMR | 8-23-01 | SIMIAN RETROVIRUS 1 | SOLUTION STRUCTURE OF THE PSEUDOKNOT OF SRV-1 RNA, INVOLVED IN RIBOSOMAL FRAMESHIFTING | P.J.A.MICHIELS,A.VERSLEYEN,C.W.A.PLEIJ,C.W.HILBERS,H.A.HEUS | |
1N8X | FR3D | 720 | 320 | SOLUTION NMR | 4-08-03 | synthetic | SOLUTION STRUCTURE OF HIV-1 STEM LOOP SL1 | D.C.LAWRENCE,C.C.STOVER,J.NOZNITSKY,Z.WU,M.F.SUMMERS | |
2L1V | FR3D | 720 | 291 | SOLUTION NMR | 9-01-10 | synthetic | SOLUTION STRUCTURE OF A PREQ1 RIBOSWITCH (CLASS I) APTAMER BOUND TO PREQ1 | M.KANG,Q.ZHANG,J.FEIGON | |
1RAW | FR3D | 360 | 104 | SOLUTION NMR | 1-27-97 | synthetic | ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES | T.DIECKMANN,J.FEIGON | |
2TPK | FR3D | 36 | 13 | SOLUTION NMR | 11-04-98 | synthetic | AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS | J.A.HOLLAND,M.R.HANSEN,Z.DU,D.W.HOFFMAN | |
2FDT | FR3D | 396 | 164 | SOLUTION NMR | 12-05-06 | synthetic | SOLUTION STRUCTURE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2 | Y.NOMURA,S.BABA,S.NAKAZATO,T.SAKAMOTO,M.KAJIKAWA,N.OKADA, G.KAWAI | |
1KFO | FR3D | 36 | 16 | 1.6 | 12-07-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC- FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | S.LIMA,J.HILDENBRAND,A.KOROSTELEV,S.HATTMAN,H.LI | |
2PCV | FR3D | 350 | 68 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
2DR8 | FR3D | 33 | 13 | 2.5 | 11-14-06 | synthetic | COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH TRNAMINIDC AND CTP | K.TOMITA,R.ISHITANI,S.FUKAI,O.NUREKI | 2DRB 2ZH3 2ZH1 2ZH7 2ZH2 2DR7 2ZH6 2ZH5 1VFG 2DR5 2ZHA 2DVI 2DR9 2ZH4 2ZHB 2ZH9 2ZH8 2DRA |
2GM0 | FR3D | 700 | 266 | SOLUTION NMR | 4-25-06 | synthetic | LINEAR DIMER OF STEMLOOP SL1 FROM HIV-1 | N.B.ULYANOV,A.MUJEEB,Z.DU,M.TONELLI,T.G.PARSLOW,T.L.JAMES | |
2XDB | FR3D | 35 | 12 | 2.5 | 1-12-11 | PECTOBACTERIUM ATROSEPTICUM | A PROCESSED NON-CODING RNA REGULATES A BACTERIAL ANTIVIRAL SYSTEM | T.R.BLOWER,X.Y.PEI,F.L.SHORT,P.C.FINERAN,D.P.HUMPHREYS,B.F.LUISI, G.P.C.SALMOND | 2XDD 2XD0 |
1ULL | FR3D | 245 | 100 | SOLUTION NMR | 8-20-97 | synthetic | RNA APTAMER COMPLEXED WITH HIV-1 REV PEPTIDE, NMR, 7 STRUCTURES | X.YE,A.GORIN,A.D.ELLINGTON,D.J.PATEL | |
3OVA | FR3D | 34 | 13 | 2.0 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE IN POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | 3OV7 3OUY 3OVB 3OVS |
1ET4 | FR3D | 175 | 75 | 2.3 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A | D.SUSSMAN,C.WILSON | 1DDY |
2PCW | FR3D | 833 | 274 | SOLUTION NMR | 5-08-07 | synthetic,synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
3PLA | FR3D | 87 | 35 | 3.1 | 1-26-11 | synthetic,synthetic | CRYSTAL STRUCTURE OF A CATALYTICALLY ACTIVE SUBSTRATE-BOUND BOX C/D RNP FROM SULFOLOBUS SOLFATARICUS | J.LIN,S.LAI,R.JIA,A.XU,L.ZHANG,J.LU,K.YE | |
2L3E | FR3D | 700 | 260 | SOLUTION NMR | 11-17-10 | synthetic | SOLUTION STRUCTURE OF P2A-J2A/B-P2B OF HUMAN TELOMERASE RNA | Q.ZHANG,N.KIM,R.D.PETERSON,Z.WANG,J.FEIGON | |
1FMN | FR3D | 175 | 71 | SOLUTION NMR | 7-11-96 | synthetic | SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES | P.FAN,A.K.SURI,R.FIALA,D.LIVE,D.J.PATEL | |
2P89 | FR3D | 960 | 433 | SOLUTION NMR | 4-03-07 | synthetic,synthetic | SOLUTION STRUCTURE OF THE 3' PSEUDOURIDYATION POCKET OF U65 SNORNA WITH BOUND SUBSTRATE | H.WU,J.FEIGON | |
2L3C | FR3D | 680 | 280 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | SOLUTION STRUCTURE OF ADAR2 DSRBM1 BOUND TO LSL RNA | F.ALLAIN,R.STEFL,F.OBERSTRASS | |
1ETF | FR3D | 34 | 14 | SOLUTION NMR | 3-12-97 | synthetic | REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, MINIMIZED AVERAGE STRUCTURE | J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY, A.D.FRANKEL,J.R.WILLAMSON | 1ETG 1I9F |
1R2P | FR3D | 340 | 132 | SOLUTION NMR | 2-03-04 | synthetic | SOLUTION STRUCTURE OF DOMAIN 5 FROM THE AI5(GAMMA) GROUP II INTRON | R.K.O.SIGEL,D.G.SASHITAL,D.L.ABRAMOVITZ,A.G.PALMER III, S.E.BUTCHER,A.M.PYLE | |
1R7W | FR3D | 680 | 227 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUCCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUCCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
1R7Z | FR3D | 680 | 209 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUUCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUUCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
1HMH | FR3D | 102 | 30 | 2.6 | 12-07-95 | engineered | THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME | H.W.PLEY,K.M.FLAHERTY,D.B.MCKAY | |
1P5N | FR3D | 680 | 253 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIB | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2EUY | FR3D | 510 | 181 | SOLUTION NMR | 1-03-06 | synthetic | SOLUTION STRUCTURE OF THE INTERNAL LOOP OF HUMAN U65 H/ACA SNORNA 3' HAIRPIN | J.FEIGON,M.KHANNA,H.WU,C.JOHANSSON,M.CAIZERGUES-FERRER | |
1NBK | FR3D | 34 | 14 | SOLUTION NMR | 12-03-03 | synthetic | THE STRUCTURE OF RNA APTAMER FOR HIV TAT COMPLEXED WITH TWO ARGININAMIDE MOLECULES | A.MATSUGAMI,S.KOBAYASHI,K.OUHASHI,S.UESUGI,R.YAMAMOTO, K.TAIRA,S.NISHIKAWA,P.K.R.KUMAR,M.KATAHIRA | |
1RNK | FR3D | 34 | 12 | SOLUTION NMR | 2-27-95 | synthetic | THE STRUCTURE OF AN RNA PSEUDOKNOT THAT CAUSES EFFICIENT FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS | L.X.SHEN,I.TINOCO JUNIOR | |
1MJI | FR3D | 68 | 28 | 2.5 | 1-21-03 | ESCHERICHIA COLI | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | A.PEREDERINA,N.NEVSKAYA,O.NIKONOV,A.NIKULIN,P.DUMAS,M.YAO, I.TANAKA,M.GARBER,G.GONGADZE,S.NIKONOV | |
2JTP | FR3D | 680 | 273 | SOLUTION NMR | 10-02-07 | synthetic | SOLUTION STRUCTURE OF THE FRAMESHIFT-INDUCING RNA STEM-LOOP IN SIV | R.J.MARCHESCHI,D.W.STAPLE,S.E.BUTCHER | |
2KPV | FR3D | 340 | 128 | SOLUTION NMR | 8-04-10 | synthetic | NMR MODEL OF THE FIRST LET-7 MIRNA COMPLEMENTARY SITE (LCS1) IN 3'-UTR OF LIN-41 MRNA FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
1T28 | FR3D | 34 | 7 | SOLUTION NMR | 8-10-04 | synthetic | HIGH RESOLUTION STRUCTURE OF A PICORNAVIRAL INTERNAL CIS- ACTING REPLICATION ELEMENT | V.THIVIYANATHAN,Y.YANG,K.KALUARACHCHI,R.REYNBRAND, D.G.GORENSTEIN,S.M.LEMON | |
2F88 | FR3D | 340 | 140 | SOLUTION NMR | 2-28-06 | synthetic | SOLUTION NMR STRUCTURE OF DOMAIN 5 FROM THE PYAIELLA LITTORALIS (PL) GROUP II INTRON | K.T.DAYIE | |
1EXY | FR3D | 396 | 164 | SOLUTION NMR | 5-15-00 | synthetic | SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET | F.JIANG,A.GORIN,W.HU,A.MAJUMDAR,S.BASKERVILLE,W.XU, A.ELLINGTON,D.J.PATEL | |
1O15 | FR3D | 33 | 12 | SOLUTION NMR | 2-18-03 | synthetic | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS | G.M.CLORE,J.KUSZEWSKI | 1EHT |
2JXV | FR3D | 330 | 126 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF A LET-7 MIRNA:LIN-41 MRNA COMPLEX FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
2OZB | FR3D | 33 | 13 | 2.6 | 3-20-07 | synthetic | STRUCTURE OF A HUMAN PRP31-15.5K-U4 SNRNA COMPLEX | S.LIU,R.LUEHRMANN,M.C.WAHL | |
1F1T | FR3D | 33 | 14 | 2.8 | 9-04-00 | synthetic | CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | C.BAUGH,D.GRATE,C.WILSON | |
3GCA | FR3D | 33 | 15 | 2.8 | 3-03-09 | synthetic | THE STRUCTURAL BASIS FOR RECOGNITION OF THE PREQ0 METABOLITE BY AN UNUSUALLY SMALL RIBOSWITCH APTAMER DOMAIN | R.C.SPITALE,J.E.WEDEKIND | |
1G70 | FR3D | 448 | 170 | SOLUTION NMR | 2-07-01 | HUMAN IMMUNODEFICIENCY VIRUS 1 | COMPLEX OF HIV-1 RRE-IIB RNA WITH RSG-1.2 PEPTIDE | Y.GOSSER,T.HERMANN,A.MAJUMDAR,W.HU,R.FREDERICK,F.JIANG,W.XU, D.J.PATEL | |
1Z31 | FR3D | 320 | 110 | SOLUTION NMR | 3-22-05 | synthetic | THE STRUCTURE OF AN ENZYME-ACTIVATING FRAGMENT OF HUMAN TELOMERASE RNA | T.C.LEEPER,G.VARANI | |
1XHP | FR3D | 320 | 120 | SOLUTION NMR | 11-23-04 | synthetic | SOLUTION STRUCTURE OF THE EXTENDED U6 ISL AS OBSERVED IN THE U2/U6 COMPLEX FROM SACCHAROMYCES CEREVISIAE | D.G.SASHITAL,G.CORNILESCU,S.E.BUTCHER | |
1KAJ | FR3D | 32 | 9 | SOLUTION NMR | 7-11-96 | synthetic | CONFORMATION OF AN RNA PSEUDOKNOT FROM MOUSE MAMMARY TUMOR VIRUS, NMR, 1 STRUCTURE | H.KANG,J.V.HINES,I.TINOCO JUNIOR | |
3BO0 | FR3D | 105 | 32 | 9.6 | 12-09-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | RIBOSOME-SECY COMPLEX | C.W.AKEY,J.F.MENETRET | 3BO1 |
3CZW | FR3D | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M |
3ID5 | FR3D | 64 | 16 | 4.0 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS C/D RNP ASSEMBLED WITH NOP5, FIBRILLARIN, L7AE AND A SPLIT HALF C/D RNA | K.YE | |
3DKN | FR3D | 69 | 30 | 8.7 | 8-19-08 | CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS | SEC61 IN THE CANINE RIBOSOME-CHANNEL COMPLEX FROM THE ENDOPLASMIC RETICULUM | J.-F.MENETRET,C.AKEY | |
1KPD | FR3D | 32 | 10 | SOLUTION NMR | 4-01-97 | synthetic | A MUTANT RNA PSEUDOKNOT THAT PROMOTES RIBOSOMAL FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE | H.KANG,I.TINOCO JUNIOR | |
1T4L | FR3D | 480 | 210 | SOLUTION NMR | 6-01-04 | synthetic | SOLUTION STRUCTURE OF DOUBLE-STRANDED RNA BINDING DOMAIN OF S. CEREVISIAE RNASE III (RNT1P) IN COMPLEX WITH THE 5' TERMINAL RNA HAIRPIN OF SNR47 PRECURSOR | H.WU,A.HENRAS,G.CHANFREAU,J.FEIGON | |
1MFY | FR3D | 496 | 126 | SOLUTION NMR | 9-18-02 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER | M.-K.LEE,S.-H.BAE,C.-J.PARK,H.-K.CHEONG,C.CHEONG,B.-S.CHOI | |
1LVJ | FR3D | 372 | 134 | SOLUTION NMR | 12-11-02 | HUMAN IMMUNODEFICIENCY VIRUS 1 | STRUCTURE OF TAR RNA COMPLEXED WITH A TAT-TAR INTERACTION NANOMOLAR INHIBITOR THAT WAS IDENTIFIED BY COMPUTATIONAL SCREENING | Z.DU,K.E.LIND,T.L.JAMES | |
1YLG | FR3D | 620 | 227 | SOLUTION NMR | 2-01-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1YNE | FR3D | 620 | 219 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JBR | FR3D | 61 | 26 | 2.1 | 10-26-01 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31- MER SRD RNA INHIBITOR | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | 1JBT |
1YNG | FR3D | 496 | 163 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JO7 | FR3D | 992 | 289 | SOLUTION NMR | 9-19-01 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS PROMOTER | S.-H.BAE,H.-K.CHEONG,J.-H.LEE,C.CHEONG,M.KAINOSHO,B.-S.CHOI | |
3FU2 | FR3D | 93 | 48 | 2.9 | 3-03-09 | synthetic | COCRYSTAL STRUCTURE OF A CLASS-I PREQ1 RIBOSWITCH | D.J.KLEIN,T.E.EDWARDS,A.R.FERRE-D'AMARE | 3K1V |
1YNC | FR3D | 620 | 210 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1EBR | FR3D | 150 | 61 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
2LDZ | FR3D | 30 | 10 | SOLUTION NMR | 2-23-99 | synthetic | SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, MINIMIZED AVERAGE STRUCTURE | C.G.HOOGSTRATEN,P.LEGAULT,A.PARDI | 1LDZ |
1NA2 | FR3D | 540 | 198 | SOLUTION NMR | 1-21-03 | synthetic | SOLUTION STRUCTURE OF THE P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,L.TRANTIREK,J.FEIGON | |
1AJU | FR3D | 600 | 229 | SOLUTION NMR | 12-17-97 | synthetic | HIV-2 TAR-ARGININAMIDE COMPLEX, NMR, 20 STRUCTURES | A.S.BRODSKY,J.R.WILLIAMSON | |
1AUD | FR3D | 930 | 213 | SOLUTION NMR | 2-25-98 | synthetic | U1A-UTRRNA, NMR, 31 STRUCTURES | F.H.-T.ALLAIN,C.C.GUBSER,P.W.A.HOWE,K.NAGAI,D.NEUHAUS, G.VARANI | |
364D | FR3D | 59 | 24 | 3.0 | 1-02-98 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | .0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | 357D |
1EKZ | FR3D | 1080 | 459 | SOLUTION NMR | 8-21-00 | DROSOPHILA MELANOGASTER | NMR STRUCTURE OF THE COMPLEX BETWEEN THE THIRD DSRBD FROM DROSOPHILA STAUFEN AND A RNA HAIRPIN | A.RAMOS,S.GRUNERT,M.BYCROFT,D.ST JOHNSTON,G.VARANI | |
1HVU | FR3D | 120 | 36 | 4.8 | 1-13-99 | synthetic | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT | J.JAEGER,T.RESTLE,T.A.STEITZ | |
2IPY | FR3D | 60 | 24 | 2.8 | 1-09-07 | synthetic | CRYSTAL STRUCTURE OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH FERRITIN H IRE-RNA | W.E.WALDEN,A.I.SELEZNEVA,J.DUPUY,A.VOLBEDA,J.C.FONTECILLA- CAMPS,E.C.THEIL,K.VOLZ | |
1RFR | FR3D | 600 | 259 | SOLUTION NMR | 3-23-04 | HUMAN COXSACKIEVIRUS B3 | NMR STRUCTURE OF THE 30MER STEMLOOP-D OF COXSACKIEVIRAL RNA | O.OHLENSCHLAGER,J.WOHNERT,E.BUCCI,S.SEITZ,S.HAFNER, R.RAMACHANDRAN,R.ZELL,M.GORLACH | |
1HWQ | FR3D | 600 | 220 | SOLUTION NMR | 5-16-01 | synthetic | SOLUTION STRUCTURE OF THE VS RIBOZYME SUBSTRATE STEM-LOOP | J.C.FLINDERS,T.DIECKMANN | |
1KP7 | FR3D | 30 | 10 | SOLUTION NMR | 4-10-02 | synthetic | CONSERVED RNA STRUCTURE WITHIN THE HCV IRES EIF3 BINDING SITE | J.GALLEGO,R.KLINCK,A.J.COLLIER,P.T.COLE,S.J.HARRIS, G.P.HARRISON,F.ABOUL-ELA,S.WALKER,G.VARANI | |
1AKX | FR3D | 30 | 12 | SOLUTION NMR | 11-19-97 | synthetic | HIV-2 TRANS ACTIVATING REGION RNA COMPLEX WITH ARGININAMIDE, NMR, MINIMIZED AVERAGE STRUCTURE | A.S.BRODSKY,J.R.WILLIAMSON | |
2BH2 | FR3D | 58 | 10 | 2.1 | 3-30-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE RUMA IN COMPLEX WITH RIBOSOMAL RNA SUBSTRATE AND S-ADENOSYLHOMOCYSTEINE. | T.T.LEE,S.AGARWALLA,R.M.STROUD | |
2K64 | FR3D | 720 | 320 | SOLUTION NMR | 7-14-09 | synthetic,synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING EBS1 TOGETHER WITH IBS1 OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1JID | FR3D | 26 | 10 | 1.8 | 10-19-01 | synthetic | HUMAN SRP19 IN COMPLEX WITH HELIX 6 OF HUMAN SRP RNA | K.WILD,I.SINNING,S.CUSACK | 1L1W |
3B91 | FR3D | 60 | 29 | 2.8 | 8-12-08 | synthetic,synthetic,synthetic | MINIMALLY HINGED HAIRPIN RIBOZYME INCORPORATES ADE38(2AP) AND 2',5'-PHOSPHODIESTER LINKAGE MUTATIONS AT THE ACTIVE SITE | C.MACELREVEY,J.KRUCINSKA,J.E.WEDEKIND | 3B5S 3BBI 3B5F 3CQS 3B5A 3CR1 3I2S 3B58 3I2R 3BBK 3I2Q 3BBM 3I2U |
1UUD | FR3D | 29 | 10 | SOLUTION NMR | 3-15-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 (CLONE | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT203, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
3B31 | FR3D | 43 | 16 | 2.4 | 12-25-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN III OF THE CRICKET PARALYSIS VIRUS IRES RNA | J.S.KIEFT,D.A.COSTANTINO,J.S.PFINGSTEN,R.P.RAMBO | 3MJA 3MJ3 3MJB |
2GIP | FR3D | 560 | 260 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF A PORTION OF THE 5'UTR OF HSPA MRNA FROM BRADYRHIZOBIUM JANPONICUM HAVING DELETED G83 | S.CHOWDHURY,C.MARIS,F.H.ALLAIN,F.NARBERHAUS | 2GIO |
2KDQ | FR3D | 290 | 108 | SOLUTION NMR | 6-23-09 | synthetic | SIMULTANEOUS RECOGNITION OF HIV-1 TAR RNA BULGE AND LOOP SEQUENCES BY CYCLIC PEPTIDE MIMIC OF TAT PROTEIN | A.DAVIDSON,T.C.LEEPER,G.VARANI | |
2K63 | FR3D | 580 | 193 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING THE EXON BINDING SITE 1 (EBS1) OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1EBS | FR3D | 145 | 62 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1UUI | FR3D | 29 | 11 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT158, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
1NBR | FR3D | 435 | 168 | SOLUTION NMR | 3-04-03 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | S.A.MCCALLUM,A.PARDI | |
2K5Z | FR3D | 290 | 111 | SOLUTION NMR | 7-14-09 | synthetic | SOLUTION STRUCTURE AND DYNAMICS OF THE APICAL STEM-LOOP OF DUCK HEPATITIS B VIRUS | K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
1UTS | FR3D | 464 | 150 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 | DESIGNED HIV-1 TAR BINDING LIGAND | B.DAVIS,A.I.H.MURCHIE,F.ABOUL-ELA,J.KARN | |
2L8H | FR3D | 290 | 102 | SOLUTION NMR | 3-23-11 | synthetic | CHEMICAL PROBE BOUND TO HIV TAR RNA | A.DAVIDSON,D.BEGLEY,C.LAU,G.VARANI | |
1ARJ | FR3D | 580 | 174 | SOLUTION NMR | 11-08-96 | synthetic | ARG-BOUND TAR RNA, NMR | F.ABOUL-ELA,G.VARANI,J.KARN | |
1ANR | FR3D | 580 | 151 | SOLUTION NMR | 1-11-97 | synthetic | CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES | F.ABOUL-ELA,G.VARANI,J.KARN | |
1SCL | FR3D | 174 | 61 | SOLUTION NMR | 1-26-95 | RATTUS NORVEGICUS | THE SARCIN-RICIN LOOP, A MODULAR RNA | A.A.SZEWCZAK,P.B.MOORE | |
2KX5 | FR3D | 290 | 110 | SOLUTION NMR | 7-07-10 | synthetic | RECOGNITION OF HIV TAR RNA BY PEPTIDE MIMETIC OF TAT PROTEIN | A.DAVIDSON,K.PATORA-KOMISARSKA,J.ROBINSON,G.VARANI | |
1L1C | FR3D | 29 | 12 | SOLUTION NMR | 3-27-02 | BACILLUS SUBTILIS | STRUCTURE OF THE LICT BACTERIAL ANTITERMINATOR PROTEIN IN COMPLEX WITH ITS RNA TARGET | Y.YANG,N.DECLERCK,X.MANIVAL,S.AYMERICH,M.KOCHOYAN | |
1FQZ | FR3D | 27 | 12 | SOLUTION NMR | 1-17-01 | synthetic | NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE | R.KLINCK,E.WESTHOF,S.WALKER,M.AFSHAR,A.COLLIER,F.ABOUL-ELA | 1F84 |
1EBQ | FR3D | 145 | 65 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1QD3 | FR3D | 493 | 163 | SOLUTION NMR | 7-12-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | HIV-1 TAR RNA/NEOMYCIN B COMPLEX | C.FABER,H.STICHT,P.ROESCH | |
1OOA | FR3D | 58 | 18 | 2.5 | 7-22-03 | synthetic | CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH- AFFINITY RNA APTAMER | D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III, G.GHOSH | |
2JWV | FR3D | 290 | 100 | SOLUTION NMR | 1-08-08 | synthetic | STRUCTURE OF A HIGH AFFINITY ANTI-NFKB RNA APTAMER | N.J.REITER,L.MAHER III,S.E.BUTCHER | |
1AQO | FR3D | 435 | 148 | SOLUTION NMR | 2-04-98 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | K.J.ADDESS,A.PARDI | |
28SR | FR3D | 28 | 11 | SOLUTION NMR | 4-20-99 | ESCHERICHIA COLI | NMR STRUCTURE OF THE MOST CONSERVED RNA MOTIF IN SRP RNA | U.SCHMITZ,T.L.JAMES,P.LUKAVSKY,P.WALTER | 28SP |
1ZBN | FR3D | 280 | 95 | SOLUTION NMR | 4-19-05 | synthetic | SOLUTION STRUCTURE OF BIV TAR HAIRPIN COMPLEXED TO JDV TAT ARGININE-RICH MOTIF | V.CALABRO,M.D.DAUGHERTY,A.D.FRANKEL | |
1MNB | FR3D | 28 | 12 | SOLUTION NMR | 1-27-97 | synthetic | BIV TAT PEPTIDE (RESIDUES 68-81), NMR, MINIMIZED AVERAGE STRUCTURE | J.D.PUGLISI,L.CHEN,S.BLANCHARD,A.D.FRANKEL | |
1Q96 | FR3D | 81 | 37 | 1.8 | 11-25-03 | synthetic | CRYSTAL STRUCTURE OF A MUTANT OF THE SARCIN/RICIN DOMAIN FROM RAT 28S RRNA | C.C.CORRELL,J.BENEKEN,M.J.PLANTINGA,M.LUBBERS,Y.L.CHAN | 1Q93 430D |
1BIV | FR3D | 140 | 56 | SOLUTION NMR | 12-23-96 | synthetic | BOVINE IMMUNODEFICIENCY VIRUS TAT-TAR COMPLEX, NMR, 5 STRUCTURES | X.YE,R.A.KUMAR,D.J.PATEL | |
2NUF | FR3D | 56 | 26 | 2.5 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 2.5-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
2EZ6 | FR3D | 56 | 26 | 2.0 | 2-07-06 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS RNASE III (D44N) COMPLEXED WITH PRODUCT OF DOUBLE-STRANDED RNA PROCESSING | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
3O7V | FR3D | 26 | 12 | 2.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END | Y.TIAN,D.K.SIMANSHU,J.-B.MA,D.J.PATEL | 3O3I 3O6E |
2A9X | FR3D | 280 | 119 | SOLUTION NMR | 11-01-05 | synthetic | TAR RNA RECOGNITION BY A CYCLIC PEPTIDOMIMETIC OF TAT PROTEIN | T.C.LEEPER,Z.ATHANASSIOU,R.L.DIAS,J.A.ROBINSON,G.VARANI | |
2KMJ | FR3D | 280 | 114 | SOLUTION NMR | 8-18-09 | HUMAN IMMUNODEFICIENCY VIRUS 2 | HIGH RESOLUTION NMR SOLUTION STRUCTURE OF A COMPLEX OF HIV-2 TAR RNA AND A SYNTHETIC TRIPEPTIDE IN A 1:2 STOICHIOMETRY | J.FERNER,M.SUHARTONO,S.BREITUNG,H.R.A.JONKER,M.HENNIG, J.WOEHNERT,M.GOEBEL,H.SCHWALBE | |
1D4R | FR3D | 54 | 22 | 2.0 | 12-02-99 | synthetic,synthetic | -MER FRAGMENT OF HUMAN SRP RNA HELIX 6 | K.WILD,O.WEICHENRIEDER,G.A.LEONARD,S.CUSACK | |
2AP5 | FR3D | 27 | 13 | SOLUTION NMR | 9-05-06 | synthetic | SOLUTION STRUCTURE OF THE C27A SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, AVERAGE STRUCTURE | P.V.CORNISH,D.P.GIEDROC | |
1KPZ | FR3D | 27 | 10 | SOLUTION NMR | 1-11-02 | synthetic | PEMV-1 P1-P2 FRAMESHIFTING PSEUDOKNOT REGULARIZED AVERAGE STRUCTURE | P.L.NIXON,D.P.GIEDROC | |
2X7N | FR3D | 27 | 12 | 11.8 | 3-31-10 | SACCHAROMYCES CEREVISIAE | MECHANISM OF EIF6S ANTI-ASSOCIATION ACTIVITY | M.GARTMANN,M.BLAU,J.-P.ARMACHE,T.MIELKE,M.TOPF,R.BECKMANN | |
1XSG | FR3D | 27 | 12 | SOLUTION NMR | 12-28-04 | synthetic | SOLUTION STRUCTURE OF E.COLI RNASE P RNA P4 STEM OLIGORIBONUCLEOTIDE, U69A MUTATION | M.SCHMITZ | 1F7I 1F7F 1F6Z 2CD1 1XSH 2CD3 1F78 1F79 1XSU 1F7G 1F7H 2CD6 1F6X 1XST 2CD5 |
2AHT | FR3D | 540 | 219 | SOLUTION NMR | 10-17-06 | synthetic | SOLUTION STRUCTURE OF DOMAIN 6 FROM THE AI5(GAMMA)GROUP II INTRON | M.C.ERAT,O.ZERBE,T.FOX,R.K.O.SIGEL | |
2IXY | FR3D | 621 | 251 | SOLUTION NMR | 9-06-06 | HEPATITIS B VIRUS | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
3DVZ | FR3D | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 483D 3DW7 1Q9A 480D 3DW6 3DW4 3DW5 1MSY |
1L2X | FR3D | 27 | 14 | 1.2 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D |
1BYJ | FR3D | 1026 | 381 | SOLUTION NMR | 10-29-99 | synthetic | GENTAMICIN C1A A-SITE COMPLEX | S.YOSHIZAWA,D.FOURMY,J.D.PUGLISI | 1PBR |
2B63 | FR3D | 27 | 6 | 3.8 | 12-06-05 | synthetic | COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX | H.KETTENBERGER,A.EISENFUEHR,F.BRUECKNER,M.THEIS,M.FAMULOK, P.CRAMER | |
484D | FR3D | 594 | 219 | SOLUTION NMR | 10-14-99 | synthetic | SOLUTION STRUCTURE OF HIV-1 REV PEPTIDE-RNA APTAMER COMPLEX | X.YE,A.A.GORIN,R.FREDERICK,W.HU,A.MAJUMDAR,W.XU,G.MCLENDON, A.ELLINGTON,D.J.PATEL | |
1XOK | FR3D | 36 | 13 | 3.0 | 1-04-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF ALFALFA MOSAIC VIRUS RNA 3'UTR IN COMPLEX WITH COAT PROTEIN N TERMINAL PEPTIDE | L.M.GUOGAS,D.J.FILMAN,J.M.HOGLE,L.GEHRKE | |
1FYO | FR3D | 675 | 244 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA | S.R.LYNCH,J.D.PUGLISI | |
1TOB | FR3D | 189 | 76 | SOLUTION NMR | 6-16-97 | synthetic | SACCHARIDE-RNA RECOGNITION IN AN AMINOGLYCOSIDE ANTIBIOTIC- RNA APTAMER COMPLEX, NMR, 7 STRUCTURES | L.JIANG,A.K.SURI,R.FIALA,D.J.PATEL | |
1YG4 | FR3D | 27 | 12 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, REGULARIZED AVERAGE STRUCTURE | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1FYP | FR3D | 783 | 283 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX | S.R.LYNCH,J.D.PUGLISI | |
1YSV | FR3D | 351 | 153 | SOLUTION NMR | 7-19-05 | synthetic | SOLUTION STRUCTURE OF THE CENTRAL REGION OF THE HUMAN GLUR- B R/G PRE-MRNA | R.STEFL,F.H.ALLAIN | |
2KXM | FR3D | 270 | 100 | SOLID-STATE NMR | 4-20-11 | synthetic | SOLUTION NMR STRUCTURE OF THE 27 NUCLEOTIDE ENGINEERED NEOMYCIN SENSING RIBOSWITCH RNA-RIBOSTMYCIN COMPLEX | D.ELKE,W.E.JULIA,O.OLIVER,S.R.SINA,S.BEATRIX,W.JENS | |
387D | FR3D | 26 | 5 | 3.1 | 8-26-03 | synthetic | RNA PSEUDOKNOT WITH 3D DOMAIN SWAPPING | S.E.LIETZKE,C.E.KUNDROT,C.L.BARNES | |
413D | FR3D | 26 | 12 | 1.8 | 7-10-98 | synthetic | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | Y.TANAKA,S.FUJII,H.HIROAKI,T.SAKATA,T.TANAKA,S.UESUGI,K.- I.TOMITA,Y.KYOGOKU | |
2RFK | FR3D | 61 | 24 | 2.9 | 2-05-08 | PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS | SUBSTRATE RNA POSITIONING IN THE ARCHAEAL H/ACA RIBONUCLEOPROTEIN COMPLEX | B.LIANG,S.XUE,R.M.TERNS,M.P.TERNS,H.LI,SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) | 3HJY |
2RP1 | FR3D | 26 | 10 | SOLUTION NMR | 3-31-09 | synthetic | REFINED SOLUTION STRUCTURE OF THE PEMV-1 MRNA PSEUDOKNOT, REGULARIZED AVERAGE STRUCTURE | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1QWB | FR3D | 442 | 150 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCUTRE OF 5'-R(GGACACGAAAUCCCGAAGUAGUGUCC)-3' : AN RNA HAIRPIN CONTAINING THE IN VITRO SELECTED CONSENSUS SEQUENCE FOR NUCLEOLIN RBD12 | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
2A43 | FR3D | 26 | 13 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
2F8T | FR3D | 50 | 24 | 3.1 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
2L5Z | FR3D | 546 | 206 | SOLUTION NMR | 2-16-11 | NEUROSPORA | NMR STRUCTURE OF THE A730 LOOP OF THE NEUROSPORA VS RIBOZYME | G.DESJARDINS,E.BONNEAU,N.GIRARD,J.BOISBOUVIER,P.LEGAULT | |
1EI2 | FR3D | 425 | 119 | SOLUTION NMR | 3-06-00 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF THE RNA MAJOR GROOVE IN THE TAU EXON 10 SPLICING REGULATORY ELEMENT BY AMINOGLYCOSIDE ANTIBIOTICS | L.VARANI,M.G.SPILLANTINI,M GOEDERT,G.VARANI | |
488D | FR3D | 65 | 33 | 3.1 | 3-06-00 | synthetic,synthetic,synthetic,synthetic | CATALYTIC RNA ENZYME-PRODUCT COMPLEX | J.B.MURRAY,H.SZOKE,A.SZOKE,W.G.SCOTT | 379D 299D 1MME 1NYI 301D 359D 1Q29 300D |
1QC8 | FR3D | 725 | 206 | SOLUTION NMR | 8-31-99 | synthetic | NMR STRUCTURE OF TAU EXON 10 SPLICING REGULATORY ELEMENT RNA | L.VARANI,M.G.SPILLANTINI,A.KLUG,M.GOEDERT,G.VARANI | |
2KGP | FR3D | 250 | 90 | SOLUTION NMR | 6-02-09 | synthetic | STRUCTURAL BASIS FOR STABILIZATION OF THE TAU PRE-MRNA SPLICING REGULATORY ELEMENT BY NOVANTRONE (MITOXANTRONE) | S.ZHENG,Y.CHEN,C.P.DONAHUE,M.S.WOLFE,G.VARANI | |
2QUX | FR3D | 150 | 54 | 2.4 | 12-18-07 | PSEUDOMONAS PHAGE PP7 | PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN | J.A.CHAO | |
1M82 | FR3D | 775 | 287 | SOLUTION NMR | 6-03-03 | synthetic | SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS | C.-J.PARK,S.-H.BAE,M.-K.LEE,G.VARANI,B.-S.CHOI | |
1KKS | FR3D | 360 | 105 | SOLUTION NMR | 3-13-02 | synthetic | STRUCTURE OF THE HISTONE MRNA HAIRPIN REQUIRED FOR CELL CYCLE REGULATION OF HISTONE GENE EXPRESSION | K.ZANIER,I.LUYTEN,C.CROMBIE,B MULLER,D.SCHUEMPERLI, J.P.LINGE,M.NILGES,M.SATTLER | |
1LC6 | FR3D | 960 | 329 | SOLUTION NMR | 5-29-02 | synthetic | SOLUTION STRUCTURE OF THE U6 INTRAMOLECULAR STEM-LOOP RNA | A.HUPPLER,L.J.NIKSTAD,A.M.ALLMANN,D.A.BROW,S.E.BUTCHER | |
283D | FR3D | 24 | 12 | 2.3 | 9-30-96 | engineered | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | K.J.BAEYENS,H.L.DE BONDT,A.PARDI,S.R.HOLBROOK | |
2HEM | FR3D | 216 | 90 | SOLUTION NMR | 9-12-06 | synthetic | NMR STRUCTURE AND MG2+ BINDING OF AN RNA SEGMENT THAT UNDERLIES THE L7/L12 STALK IN THE E.COLI 50S RIBOSOMAL SUBUNIT. | Q.ZHAO,U.NAGASWAMY,H.LEE,Y.XIA,X.GAO,G.FOX | |
2KF0 | FR3D | 240 | 96 | SOLUTION NMR | 7-21-09 | synthetic | NMR STRUCTURE OF U6 ISL AT PH 7.0 | V.VENDITTI,S.E.BUTCHER | 2KEZ 1SY4 |
1NYB | FR3D | 360 | 142 | SOLUTION NMR | 6-24-03 | ENTEROBACTERIA PHAGE PHI21 | SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX | C.D.CILLEY,J.R.WILLIAMSON | |
1SYZ | FR3D | 336 | 116 | SOLUTION NMR | 11-09-04 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA AT PH 5.7 | N.J.REITER,H.BLAD,F.ABILDGAARD,S.E.BUTCHER | |
3MIJ | FR3D | 24 | 12 | 2.6 | 2-16-11 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA G-QUADRUPLEX COMPLEXED WITH AN ACRIDINE-BASED LIGAND. | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
1RHT | FR3D | 24 | 6 | SOLUTION NMR | 6-03-95 | synthetic | -MER RNA HAIRPIN COAT PROTEIN BINDING SITE FOR BACTERIOPHAGE R17 (NMR, MINIMIZED AVERAGE STRUCTURE) | P.N.BORER,Y.LIN,S.WANG,M.W.ROGGENBUCK,J.M.GOTT, O.C.UHLENBECK,I.PELCZER | |
2Q1R | FR3D | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | |
1NC0 | FR3D | 432 | 151 | SOLUTION NMR | 2-25-03 | synthetic | U80G U6 INTRAMOLECULAR STEM-LOOP RNA FROM SACCHAROMYCES CEREVISIAE | D.G.SASHITAL,A.M.ALLMANN,S.VAN DOREN,S.E.BUTCHER | |
2F4X | FR3D | 864 | 360 | SOLUTION NMR | 2-28-06 | synthetic | NMR SOLUTION OF HIV-1 LAI KISSING COMPLEX | F.KIEKEN,F.PAQUET,F.BRULE,J.PAOLETTI,G.LANCELOT | |
1A9N | FR3D | 48 | 12 | 2.4 | 9-23-98 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA | S.R.PRICE,P.R.EVANS,K.NAGAI | |
2NOK | FR3D | 88 | 35 | 3.0 | 2-13-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DOMAIN FROM HEPATITIS C VIRUS. | S.M.DIBROV,H.JOHNSTON-COS,Y.H.WENG | 2PN3 2PN4 |
1MT4 | FR3D | 408 | 164 | SOLUTION NMR | 1-14-03 | synthetic | STRUCTURE OF 23S RIBOSOMAL RNA HAIRPIN 35 | I.LEBARS,S.YOSHIZAWA,A.R.STENHOLM,E.GUITTET,S.DOUTHWAITE, D.FOURMY | |
255D | FR3D | 24 | 12 | 2.0 | 2-07-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | S.R.HOLBROOK,C.CHEONG,I.TINOCO JR,S.-H.KIM | |
2ANN | FR3D | 23 | 6 | 2.3 | 10-24-06 | synthetic | CRYSTAL STRUCTURE (I) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH 25 NT RNA HAIRPIN | L.MALININA,M.TEPLOVA,K.MUSUNURU,A.TEPLOV,J.C.DARNELL, S.K.BURLEY,R.B.DARNELL,D.J.PATEL | 2ANR |
1TFN | FR3D | 24 | 7 | SOLUTION NMR | 2-12-97 | synthetic | STRUCTURE REFINEMENT FOR A 24-NUCLEOTIDE RNA HAIRPIN, NMR, MINIMIZED AVERAGE STRUCTURE | D.J.KERWOOD,P.N.BORER | |
1E4P | FR3D | 480 | 184 | SOLUTION NMR | 1-16-01 | NEUROSPORA SP. | STRUCTURE OF THE RIBOZYME SUBSTRATE HAIRPIN OF NEUROSPORA VS RNA. A CLOSE LOOK AT THE CLEAVAGE SITE | P.J.A.MICHIELS,C.H.J.SCHOUTEN,H.A.HEUS,C.W.HILBERS | |
2QH2 | FR3D | 480 | 180 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE CR7 TERMINAL HAIRPIN LOOP FROM HUMAN TELOMERASE RNA | J.FEIGON,C.A.THEIMER,N CHIM,K.E.BREECE | |
3A6P | FR3D | 92 | 44 | 2.9 | 12-08-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP:PRE-MIRNA COMPLEX | C.OKADA,E.YAMASHITA,S.J.LEE,S.SHIBATA,J.KATAHIRA,A.NAKAGAWA, Y.YONEDA,T.TSUKIHARA | |
2FRL | FR3D | 460 | 159 | SOLUTION NMR | 2-14-06 | synthetic | SOLUTION STRUCTURE OF THE HELIX II TEMPLATE BOUNDARY ELEMENT FROM TETRAHYMENA TELOMERASE RNA | R.J.RICHARDS,C.A.THEIMER,L.D.FINGER,J.FEIGON | |
2QEK | FR3D | 46 | 20 | 1.8 | 5-06-08 | synthetic | HIV-1 SUBTYPE F DIS RNA EXTENDED DUPLEX FORM | S.FREISZ,E.ENNIFAR,P.DUMAS | |
2ES5 | FR3D | 460 | 200 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SRE RNA | F.H.T.ALLAIN | 2B6G 2ESE |
1JTJ | FR3D | 437 | 132 | SOLUTION NMR | 12-11-02 | synthetic | SOLUTION STRUCTURE OF HIV-1LAI MUTATED SL1 HAIRPIN | F.KIEKEN,E.ARNOULT,F.BARBAULT,F.PAQUET,T.HUYNH-DINH, J.PAOLETTI,D.GENEST,G.LANCELOT | |
1NLC | FR3D | 46 | 22 | 1.9 | 5-13-03 | synthetic | HIV-1 DIS(MAL) DUPLEX ZN-SOAKED | E.ENNIFAR,P.WALTER,P.DUMAS | 1WVD 1Y6T 1Y6S 462D 3DVV 1Y95 1O3Z 1Y73 3C44 1Y90 1Y99 |
1BVJ | FR3D | 483 | 181 | SOLUTION NMR | 12-09-98 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | HIV-1 RNA A-RICH HAIRPIN LOOP | E.V.PUGLISI,J.D.PUGLISI | |
1MWL | FR3D | 42 | 18 | 2.4 | 2-18-03 | synthetic | CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE | Q.VICENS,E.WESTHOF | 2ET4 1YRJ 2BEE 2ET5 1LC4 2ESI 2F4T 2ET3 2ESJ 2G5Q 1J7T 2PWT 2BE0 |
1S2F | FR3D | 23 | 9 | SOLUTION NMR | 8-31-04 | synthetic | AVERAGE SOLUTION STRUCTURE OF A PSEUDO-5'-SPLICE SITE FROM THE NEGATIVE REGULATOR OF SPLICING OF ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
2OIY | FR3D | 46 | 20 | 1.6 | 12-25-07 | synthetic | CRYSTAL STRUCTURE OF THE DUPLEX FORM OF THE HIV-1(LAI) RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.WALTER,P.DUMAS | 2OIJ 2OJ0 3FAR |
1XPE | FR3D | 46 | 20 | 1.9 | 10-18-05 | synthetic | HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 2B8R |
1S34 | FR3D | 345 | 135 | SOLUTION NMR | 8-31-04 | synthetic | SOLUTION STRUCTURE OF RESIDUES 907-929 FROM ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1TLR | FR3D | 460 | 149 | SOLUTION NMR | 11-12-97 | synthetic | SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1XPF | FR3D | 46 | 20 | 2.3 | 10-18-05 | synthetic | HIV-1 SUBTYPE A GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 2FD0 2FCY 1ZCI 1Y3S 1Y3O 1XP7 1K9W 2B8S 1YXP 2FCX 2FCZ |
1MFK | FR3D | 460 | 179 | SOLUTION NMR | 11-13-02 | synthetic | STRUCTURE OF PROKARYOTIC SECIS MRNA HAIRPIN | D.FOURMY,E.GUITTET,S.YOSHIZAWA | |
1BGZ | FR3D | 138 | 47 | SOLUTION NMR | 1-13-99 | synthetic | S8 RRNA BINDING SITE FROM E. COLI, NMR, 6 STRUCTURES | K.KALURACHCHI,E.P.NIKONOWICZ | |
2PJP | FR3D | 23 | 10 | 2.3 | 10-30-07 | ESCHERICHIA COLI | STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA | N.SOLER,D.FOURMY,S.YOSHIZAWA | |
1OW9 | FR3D | 253 | 99 | SOLUTION NMR | 5-20-03 | synthetic | NMR STRUCTURE OF THE ACTIVE CONFORMATION OF THE VS RIBOZYME CLEAVAGE SITE | B.HOFFMANN,G.T.MITCHELL,P.GENDRON,F.MAJOR,A.A.ANDERSEN, R.A.COLLINS,P.LEGAULT | |
1K5I | FR3D | 230 | 91 | SOLUTION NMR | 10-17-01 | synthetic | NMR STRUCTURE OF A RIBOSOMAL RNA HAIRPIN CONTAINING A CONSERVED CUCAA PENTALOOP | U.NAGASWAMY,X.GAO,S.A.MARTINIS,G.E.FOX | |
2PLY | FR3D | 46 | 20 | 2.6 | 11-06-07 | MOORELLA THERMOACETICA | STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA. | N.SOLER,D.FOURMY,S.YOSHIZAWA | 1WSU 2UWM |
3PHP | FR3D | 230 | 80 | SOLUTION NMR | 10-21-98 | synthetic | STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2QH3 | FR3D | 460 | 160 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U64 H/ACA SNORNA 3' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1JU1 | FR3D | 690 | 292 | SOLUTION NMR | 8-23-02 | synthetic | DIMER INITIATION SEQUENCE OF HIV-1LAI GENOMIC RNA: NMR SOLUTION STRUCTURE OF THE EXTENDED DUPLEX | F.GIRARD,F.BARBAULT,G.LANCELOT | |
1NEM | FR3D | 207 | 88 | SOLUTION NMR | 8-31-99 | synthetic | SACCHARIDE-RNA RECOGNITION IN THE NEOMYCIN B / RNA APTAMER COMPLEX | L.JIANG,A.MAJUMDAR,W.HU,T.J.JAISHREE,W.XU,D.J.PATEL | |
1BAU | FR3D | 46 | 18 | SOLUTION NMR | 4-27-99 | synthetic | NMR STRUCTURE OF THE DIMER INITIATION COMPLEX OF HIV-1 GENOMIC RNA, MINIMIZED AVERAGE STRUCTURE | A.MUJEEB,J.L.CLEVER,T.M.BILLECI,T.L.JAMES,T.G.PARSLOW | |
2RO2 | FR3D | 23 | 9 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN I OF THE NEGATIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,S.GAGO,M.DE LA PENA,R.FLORES | |
3BNL | FR3D | 44 | 21 | 2.6 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING A SITE IN THE PRESENCE OF [CO(NH3)6]CL3 | J.KONDO,E.WESTHOF | |
1YG3 | FR3D | 540 | 198 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, 20 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1IKD | FR3D | 660 | 206 | SOLUTION NMR | 4-01-97 | synthetic | ACCEPTOR STEM, NMR, 30 STRUCTURES | A.RAMOS,G.VARANI | |
3HTX | FR3D | 88 | 40 | 3.1 | 9-29-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF SMALL RNA METHYLTRANSFERASE HEN1 | Y.HUANG,L.-J.JI,Q.-C.HUANG,D.G.VASSYLYEV,X.-M.CHEN,J.-B.MA | |
3BNP | FR3D | 43 | 16 | 2.7 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE (A1555G MUTANT) | J.KONDO,E.WESTHOF | 3BNN 3BNO |
2FQN | FR3D | 43 | 18 | 2.3 | 2-14-06 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE | J.KONDO,A.URZHUMTSEV,E.WESTHOF | 2O3Y 2G5K 2O3W |
2JYM | FR3D | 330 | 135 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF STEM-LOOP ALPHA OF THE HEPATITIS B VIRUS POST-TRANSCRIPTIONAL REGULATORY ELEMENT | O.OHLENSCHLAGER,M.GORLACH,M.SCHWALBE | |
1JUR | FR3D | 198 | 76 | SOLUTION NMR | 1-16-02 | synthetic | SOLUTION STRUCTURE OF HELIX III IN XENOPUS OOCYTE 5S RRNA. | P.W.HUBER,J.P.RIFE,P.B.MOORE | |
1K6G | FR3D | 440 | 183 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
1F9L | FR3D | 22 | 9 | SOLUTION NMR | 7-26-00 | synthetic | SOLUTION STRUCTURE OF A 22-NUCLEOTIDE HAIRPIN SIMILAR TO THE P5ABC REGION OF A GROUP I RIBOZYME WITH COBALT(III) HEXAMMINE COMPLEXED TO THE GAAA TETRALOOP | S.RUDISSER,I.TINOCO JR. | |
3BNQ | FR3D | 86 | 32 | 2.0 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF SRCL2 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNS 3BNR |
3FTF | FR3D | 44 | 20 | 2.8 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF A. AEOLICUS KSGA IN COMPLEX WITH RNA AND SAH | C.TU,X.JI | 3FTE |
2GV3 | FR3D | 440 | 163 | SOLUTION NMR | 8-08-06 | synthetic | TRANSLOCATION OF A TRNA WITH AN EXTENDED ANTICODON THROUGH THE RIBOSOME | S.S.PHELPS,C.GAUDIN,S.YOSHIZAWA,C.BENITEZ,D.FOURMY,S.JOSEPH | |
1FJE | FR3D | 418 | 148 | SOLUTION NMR | 1-03-01 | synthetic | SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA | F.H.T.ALLAIN,P.BOUVET,T.DIECKMANN,J.FEIGON | |
1TJZ | FR3D | 440 | 166 | SOLUTION NMR | 9-28-04 | synthetic | SOLUTION STRUCTURE OF THE ACTIVE SITE STEM-LOOP OF THE VS RIBOZYME | J.FLINDERS,T.DIECKMANN | |
2GRW | FR3D | 264 | 91 | SOLUTION NMR | 3-06-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | |
2GV4 | FR3D | 286 | 119 | SOLUTION NMR | 3-20-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | 1N66 |
2JUK | FR3D | 440 | 179 | SOLUTION NMR | 11-20-07 | synthetic | GUANIDINO NEOMYCIN B RECOGNITION OF AN HIV-1 RNA HELIX | D.W.STAPLE,V.VENDITTI,N.NICCOLAI,L.ELSON-SCHWAB,Y.TOR, S.E.BUTCHER | |
3MEI | FR3D | 44 | 19 | 2.0 | 1-26-11 | synthetic | REGULATORY MOTIF FROM THE THYMIDYLATE SYNTHASE MRNA | S.DIBROV,J.MCLEAN,T.HERMANN | |
1OSW | FR3D | 506 | 181 | SOLUTION NMR | 5-20-03 | synthetic | THE STEM OF SL1 RNA IN HIV-1: STRUCTURE AND NUCLEOCAPSID PROTEIN BINDING FOR A 1X3 INTERNAL LOOP | Y.YUAN,D.J.KERWOOD,A.C.PAOLETTI,M.F.SHUBSDA,P.N.BORER | |
2O3V | FR3D | 43 | 17 | 2.8 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB33 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | |
1NTB | FR3D | 40 | 15 | 2.9 | 5-13-03 | synthetic,synthetic | .9 A CRYSTAL STRUCTURE OF STREPTOMYCIN RNA-APTAMER COMPLEX | V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 1NTA |
2HNS | FR3D | 440 | 180 | SOLUTION NMR | 10-31-06 | synthetic | STRUCTURE OF THE AAGU TETRALOOP | C.GAUDIN,F.FOURMY,S.YOSHIZAWA | |
2KD8 | FR3D | 264 | 108 | SOLUTION NMR | 1-19-10 | synthetic | SOLUTION STRUCTURE OF THE STEM-LOOP IIID OF GBV-B IRES | V.THIVIYANATHAN,R.KULASEGRAN SHYLINI,D.G.GORENSTEIN, K.KALUARACHCHI | |
2AP0 | FR3D | 540 | 230 | SOLUTION NMR | 9-05-06 | synthetic | SOLUTION STRUCTURE OF THE C27A SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, 20 LOWEST ENERGY STRUCTURES | P.V.CORNISH,D.P.GIEDROC | |
2JSE | FR3D | 220 | 80 | SOLUTION NMR | 11-20-07 | synthetic | NMR REVEALS ABSENCE OF HYDROGEN BONDING IN ADJACENT UU AND AG MISMATCHES IN AN ISOLATED INTERNAL LOOP FROM RIBOSOMAL RNA. | N.SHANKAR | |
1PJY | FR3D | 440 | 195 | SOLUTION NMR | 8-05-03 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING STEM- LOOP RNA | D.W.STAPLE,S.E.BUTCHER | |
2F8S | FR3D | 44 | 18 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
1DZ5 | FR3D | 572 | 182 | SOLUTION NMR | 3-29-00 | HOMO SAPIENS | THE NMR STRUCTURE OF THE 38KDA U1A PROTEIN-PIE RNA COMPLEX REVEALS THE BASIS OF COOPERATIVITY IN REGULATION OF POLYADENYLATION BY HUMAN U1A PROTEIN | L.VARANI,S.I.GUNDERSON,I.W.MATTAJ,L.E.KAY,D.NEUHAUS,G.VARANI | |
1IE1 | FR3D | 396 | 125 | SOLUTION NMR | 6-20-01 | synthetic | NMR SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY HAMSTER NUCLEOLIN RBD12. | P.BOUVET,F.H-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
2K66 | FR3D | 440 | 200 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-STEM CLOSED BY A GAAA TETRALOOP OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
2G1W | FR3D | 330 | 108 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF THE AQUIFEX AEOLICUS TMRNA PSEUDOKNOT PK1 | S.NONIN-LECOMTE,F.DARDEL | |
3LOA | FR3D | 42 | 15 | 2.3 | 8-04-10 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA CONSTRUCT WITH TWO ADJACENT LIGAND BINDING SITES OF HELIX H44 IN 16S RIBOSOMAL RNA | S.DIBROV | |
1K6H | FR3D | 440 | 189 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
2W2H | FR3D | 44 | 7 | 3.2 | 12-09-08 | EQUINE INFECTIOUS ANEMIA VIRUS | STRUCTURAL BASIS OF TRANSCRIPTION ACTIVATION BY THE CYCLIN T1-TAT-TAR RNA COMPLEX FROM EIAV | K.ANAND,M.GEYER | |
1K2G | FR3D | 22 | 8 | SOLUTION NMR | 5-08-02 | synthetic | STRUCTURAL BASIS FOR THE 3'-TERMINAL GUANOSINE RECOGNITION BY THE GROUP I INTRON | Y.KITAMURA,Y.MUTO,S.WATANABE,I.KIM,T.ITO,Y.NISHIYA, K.SAKAMOTO,T.OHTSUKI,G.KAWAI,K.WATANABE,K.HOSONO,H.TAKAKU, E.KATOH,T.YAMAZAKI,T.INOUE,S.YOKOYAMA | |
1RLG | FR3D | 44 | 18 | 2.7 | 6-01-04 | synthetic | MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO- CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX | T.MOORE,Y.ZHANG,M.O.FENLEY,H.LI | |
1IE2 | FR3D | 462 | 156 | SOLUTION NMR | 6-20-01 | synthetic | SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY RBD12 OF HAMSTER NUCLEOLIN.SNRE (ANTI) | P.BOUVET,F.H.-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
1FEU | FR3D | 80 | 32 | 2.3 | 6-25-01 | synthetic,synthetic | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | R.V.FEDOROV,V.A.MESHCHERYAKOV,G.M.GONGADZE,N.P.FOMENKOVA, N.A.NEVSKAYA,M.SELMER,M.LAURBERG,O.KRISTENSEN,S.AL- KARADAGHI,A.LILJAS,M.B.GARBER,S.V.NIKONOV | |
1JP0 | FR3D | 588 | 196 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITHOUT RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
2O3X | FR3D | 42 | 17 | 2.9 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE PROKARYOTIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB30 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | 2F4S |
1URN | FR3D | 55 | 13 | 1.9 | 3-08-96 | synthetic | U1A MUTANT/RNA COMPLEX + GLYCEROL | C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI | |
1SZY | FR3D | 21 | 7 | SOLUTION NMR | 4-20-04 | synthetic | SOLUTION STRUCTURE OF ITALY1 ("INITIATOR TRNA ANTICODON LOOP FROM YEAST"), AN UNMODIFIED 21-NT RNA WITH THE SEQUENCE OF THE ANTICODON STEM-LOOP OF YEAST INITIATOR TRNA | D.C.SCHWEISGUTH,P.B.MOORE | |
1QWA | FR3D | 357 | 144 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCTURE OF 5'-R(GGAUGCCUCCCGAGUGCAUCC): AN RNA HAIRPIN DERIVED FROM THE MOUSE 5'ETS THAT BINDS NUCLEOLIN RBD12. | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
1K8W | FR3D | 21 | 8 | 1.9 | 12-31-01 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI PSEUDOURIDINE SYNTHASE TRUB BOUND TO A T STEM-LOOP RNA | C.HOANG,A.R.FERRE-D'AMARE | 1ZL3 |
17RA | FR3D | 252 | 86 | SOLUTION NMR | 4-20-99 | synthetic | BRANCHPOINT HELIX FROM YEAST AND BINDING SITE FOR PHAGE GA/MS2 COAT PROTEINS, NMR, 12 STRUCTURES | E.P.NIKONOWICZ,J.S.SMITH | |
1O9M | FR3D | 42 | 17 | 2.4 | 3-27-03 | ESCHERICHIA COLI | THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY. | R.RUSSELL,J.B.MURRAY | 2F4U 2ET8 |
1A4D | FR3D | 41 | 15 | SOLUTION NMR | 4-29-98 | ESCHERICHIA COLI,ESCHERICHIA COLI | LOOP D/LOOP E ARM OF ESCHERICHIA COLI 5S RRNA, NMR, MINIMIZED AVERAGE STRUCTURE | A.DALLAS,P.B.MOORE | |
2ZKO | FR3D | 42 | 18 | 1.7 | 10-14-08 | INFLUENZA A VIRUS | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUMAN INFLUENZA VIRUS A | Y.A.YUAN | |
2BJ2 | FR3D | 40 | 20 | SOLUTION NMR | 2-02-99 | synthetic,synthetic | RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE | A.J.LEE,D.M.CROTHERS | 1BJ2 |
2FY1 | FR3D | 357 | 136 | SOLUTION NMR | 2-06-07 | HOMO SAPIENS | A DUAL MODE OF RNA RECOGNITION BY THE RBMY PROTEIN | L.SKRISOVSKA,C.BOURGOIS,R.STEFL,L.KISTER,P.WENTER,D.ELLIOT, J.STEVENIN,F.H.T.ALLAIN | |
1RPU | FR3D | 42 | 19 | 2.5 | 1-13-04 | synthetic | CRYSTAL STRUCTURE OF CIRV P19 BOUND TO SIRNA | J.M.VARGASON,G.SZITTYA,J.BURGYAN,T.M.T.HALL | |
1RKJ | FR3D | 294 | 98 | SOLUTION NMR | 4-27-04 | MESOCRICETUS AURATUS | SOLUTION STRUCTURE OF THE COMPLEX FORMED BY THE TWO N- TERMINAL RNA-BINDING DOMAINS OF NUCLEOLIN AND A PRE-RRNA TARGET | C.JOHANSSON,L.D.FINGER,L.TRANTIREK,T.D.MUELLER,S.KIM, I.A.LAIRD-OFFRINGA,J.FEIGON | |
1ZE2 | FR3D | 42 | 16 | 3.0 | 4-26-05 | synthetic | CONFORMATIONAL CHANGE OF PSEUDOURIDINE 55 SYNTHASE UPON ITS ASSOCIATION WITH RNA SUBSTRATE | K.PHANNACHET,R.H.HUANG | 2AB4 |
2H2X | FR3D | 420 | 143 | SOLUTION NMR | 10-03-06 | synthetic | SOLUTION STRUCTURE OF THE TETRAHYMENA TELOMERASE RNA STEM IV TERMINAL LOOP | R.J.RICHARDS,H.WU,L.TRANTIREK,C.M.O'CONNOR,K.COLLINS, J.FEIGON | |
1JOX | FR3D | 504 | 167 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITH RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
1D0U | FR3D | 483 | 184 | SOLUTION NMR | 5-24-00 | synthetic | SOLUTION STRUCTURE OF AN RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN | J.S.SMITH,E.P.NIKONOWICZ | |
1KPY | FR3D | 405 | 133 | SOLUTION NMR | 1-11-02 | synthetic | PEMV-1 P1-P2 FRAMESHIFTING PSEUDOKNOT, 15 LOWEST ENERGY STRUCTURES | P.L.NIXON,D.P.GIEDROC | |
3DH3 | FR3D | 84 | 26 | 3.0 | 4-28-09 | synthetic | CRYSTAL STRUCTURE OF RLUF IN COMPLEX WITH A 22 NUCLEOTIDE RNA SUBSTRATE | A.ALIAN,A.DEGIOVANNI,R.M.STROUD,J.S.FINER-MOORE | |
2RPK | FR3D | 20 | 7 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN II OF THE POSITIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,M.DE LA PENA,S.GAGO,R.FLORES | |
2TOB | FR3D | 260 | 90 | SOLUTION NMR | 6-22-99 | synthetic | SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES | L.JIANG,D.J.PATEL | |
1BN0 | FR3D | 220 | 83 | SOLUTION NMR | 4-27-99 | synthetic | SL3 HAIRPIN FROM THE PACKAGING SIGNAL OF HIV-1, NMR, 11 STRUCTURES | L.PAPPALARDO,D.J.KERWOOD,I.PELCZER,P.N.BORER | |
1HLX | FR3D | 400 | 154 | SOLUTION NMR | 9-15-95 | synthetic | P1 HELIX NUCLEIC ACIDS (DNA/RNA) RIBONUCLEIC ACID | F.H.-T.ALLAIN,G.VARANI | |
2RP0 | FR3D | 728 | 294 | SOLUTION NMR | 3-31-09 | synthetic | REFINED SOLUTION STRUCTURE OF THE PEMV-1 MRNA PSEUDOKNOT, 28 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1A1T | FR3D | 500 | 198 | SOLUTION NMR | 6-17-98 | synthetic | STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO THE SL3 PSI-RNA RECOGNITION ELEMENT, NMR, 25 STRUCTURES | R.N.DE GUZMAN,Z.R.WU,C.C.STALLING,L.PAPPALARDO,P.N.BORER, M.F.SUMMERS | |
2O33 | FR3D | 400 | 159 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM S. CEREVISIAE | D.G.SASHITAL,V.VENDITTI,C.A.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
1EC6 | FR3D | 40 | 9 | 2.4 | 2-21-00 | synthetic | CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN | H.A.LEWIS,K.MUSUNURU,K.B.JENSEN,C.EDO,H.CHEN | |
2I82 | FR3D | 79 | 28 | 2.0 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE | C.HOANG | |
3NJ6 | FR3D | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
2RPT | FR3D | 200 | 78 | SOLUTION NMR | 8-25-09 | synthetic | STRUCTURE OF THE CC MISMATCH FROM THE THYMIDYLATE SYNTHASE BINDING SITE 1 HAIRPIN AND ANALYSIS OF ITS INTERACTION WITH PAROMOMYCIN | T.J.TAVARES,P.E.JOHNSON | |
1U2A | FR3D | 20 | 8 | SOLUTION NMR | 3-04-98 | SACCHAROMYCES CEREVISIAE | STEM LOOP IIA FROM U2SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE | S.C.STALLINGS,P.B.MOORE | 2U2A |
361D | FR3D | 40 | 9 | 3.0 | 7-01-98 | synthetic | CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP | M.PERBANDT,A.NOLTE,S.LORENZ,V.A.ERDMANN,C.BETZEL | |
1MFJ | FR3D | 200 | 76 | SOLUTION NMR | 11-06-02 | synthetic | ' STEM-LOOP FROM HUMAN U4 SNRNA | L.R.COMOLLI,N.B.ULYANOV,T.L.JAMES,W.H.GMEINER | |
2JPP | FR3D | 400 | 140 | SOLUTION NMR | 8-21-07 | PSEUDOMONAS FLUORESCENS | STRUCTURAL BASIS OF RSMA/CSRA RNA RECOGNITION: STRUCTURE OF RSME BOUND TO THE SHINE-DALGARNO SEQUENCE OF HCNA MRNA | M.SCHUBERT,K.LAPOUGE,O.DUSS,F.C.OBERSTRASS,I.JELESAROV, D.HAAS,F.H.-T.ALLAIN | |
1SLO | FR3D | 19 | 7 | SOLUTION NMR | 12-07-96 | CAENORHABDITIS ELEGANS | FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS, NMR, MINIMIZED AVERAGE STRUCTURE | N.L.GREENBAUM,I.RADHAKRISHNAN,D.J.PATEL,D.HIRSH | 1SLP |
2P7E | FR3D | 60 | 28 | 2.0 | 5-22-07 | synthetic,synthetic,synthetic,synthetic | VANADATE AT THE ACTIVE SITE OF A SMALL RIBOZYME SUGGESTS A ROLE FOR WATER IN TRANSITION-STATE STABILIZATION | A.T.TORELLI,J.KRUCINSKA,J.E.WEDEKIND | 1ZFX 3GS1 2OUE 2FGP 2P7F 2NPY 2BCY 1ZFV 3GS8 2P7D 2D2L 1X9K 2D2K 1X9C 2NPZ 2BCZ 1ZFT |
1QC0 | FR3D | 57 | 28 | 1.6 | 11-11-99 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
1DFU | FR3D | 38 | 15 | 1.8 | 12-02-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION | M.LU,T.A.STEITZ | |
2RLU | FR3D | 190 | 70 | SOLUTION NMR | 2-26-08 | synthetic | THE THREE DIMENSIONAL STRUCTURE OF THE MOORELLA THERMOACETICA SELENOCYSTEINE INSERTION SEQUENCE RNA HAIRPIN AND ITS INTERACTION WITH THE ELONGATION FACTOR SELB | A.V.BERIBISKY,T.J.TAVARES,A.N.AMBORSKI,M.MOTAMED, A.E.JOHNSON,T.L.MARK,P.E.JOHNSON | |
1I3X | FR3D | 285 | 117 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA | S.C.BLANCHARD,J.D.PUGLISI | |
1ESY | FR3D | 380 | 135 | SOLUTION NMR | 5-31-00 | synthetic | NMR STRUCTURE OF STEM LOOP SL2 OF THE HIV-1 PSI RNA PACKAGING SIGNAL REVEALS A NOVEL A-U-A BASE-TRIPLE PLATFORM | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,M.F.SUMMERS | |
2ZI0 | FR3D | 38 | 18 | 2.8 | 7-22-08 | synthetic | CRYSTAL STRUCTURE OF TAV2B/SIRNA COMPLEX | Y.A.YUAN,H.-Y.CHEN | |
2C4Z | FR3D | 26 | 10 | 2.6 | 1-05-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (2SU -5-6) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 2B2E 1AQ4 2C4Y 2BU1 1ZDH 1ZDI 2IZM 2B2G 2C51 2BQ5 2BNY 1AQ3 2IZ8 2C4Q 1ZDK 2C50 2IZ9 |
2B7G | FR3D | 190 | 70 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SMAUG RECOGNITION RNA ELEMENT | P.E.JOHNSON,L.W.DONALDSON | |
1F27 | FR3D | 30 | 14 | 1.3 | 6-12-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
2XEB | FR3D | 330 | 132 | SOLUTION NMR | 5-26-10 | HOMO SAPIENS,HOMO SAPIENS | NMR STRUCTURE OF THE PROTEIN-UNBOUND SPLICEOSOMAL U4 SNRNA 5' STEM LOOP | M.FALB,I.AMATA,F.GABEL,B.SIMON,T.CARLOMAGNO | |
1Q2R | FR3D | 38 | 13 | 2.9 | 9-09-03 | synthetic | CHEMICAL TRAPPING AND CRYSTAL STRUCTURE OF A CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE COVALENT INTERMEDIATE | W.XIE,X.LIU,R.H.HUANG | 1Q2S |
1UUU | FR3D | 285 | 93 | SOLUTION NMR | 2-25-98 | synthetic | STRUCTURE OF AN RNA HAIRPIN LOOP WITH A 5'-CGUUUCG-3' LOOP MOTIF BY HETERONUCLEAR NMR SPECTROSCOPY AND DISTANCE GEOMETRY, 15 STRUCTURES | C.SICH,O.OHLENSCHLAGER,R.RAMACHANDRAN,M.GORLACH,L.R.BROWN | |
1R9F | FR3D | 38 | 19 | 1.9 | 1-27-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF P19 COMPLEXED WITH 19-BP SMALL INTERFERING RNA | K.YE,L.MALININA,D.J.PATEL | |
1ATO | FR3D | 190 | 60 | SOLUTION NMR | 11-12-97 | HEPATITIS DELTA VIRUS | THE STRUCTURE OF THE ISOLATED, CENTRAL HAIRPIN OF THE HDV ANTIGENOMIC RIBOZYME, NMR, 10 STRUCTURES | M.H.KOLK,H.A.HEUS,C.W.HILBERS | |
3CZ3 | FR3D | 76 | 36 | 3.2 | 5-05-09 | synthetic,TOMATO ASPERMY VIRUS | CRYSTAL STRUCTURE OF TOMATO ASPERMY VIRUS 2B IN COMPLEX WITH SIRNA | J.B.MA,F.LI,S.W.DING,D.J.PATEL | |
1T0D | FR3D | 64 | 28 | 2.2 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | 1T0E 1ZX7 2A04 1ZZ5 |
3OL9 | FR3D | 140 | 62 | 2.2 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH 3'-DEOXY-CTP | P.GONG,O.B.PEERSEN | 3OLB 3OL6 3OL7 3OL8 3OLA |
3BT7 | FR3D | 36 | 11 | 2.4 | 4-29-08 | synthetic | STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE TRMA IN COMPLEX WITH 19 NUCLEOTIDE T-ARM ANALOGUE | A.ALIAN,R.M.STROUD,J.FINER-MOORE | |
1NZ1 | FR3D | 391 | 153 | SOLUTION NMR | 5-13-03 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM-LOOP CONTAINING AN SP PHOSPHOROTHIOATE AT NUCLEOTIDE U80 | N.J.REITER,L.J.NIKSTAD,A.M.ALLMAN,R.J.JOHNSON,S.E.BUTCHER | |
3KS8 | FR3D | 36 | 18 | 2.4 | 1-12-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMAIN IN COMPLEX WITH 18BP DSRNA | C.R.KIMBERLIN,Z.A.BORNHOLDT,S.LI,V.L.WOODS,I.J.MACRAE, E.O.SAPHIRE | |
2QH4 | FR3D | 360 | 121 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U85 C/D-H/ACA SCARNA 5' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1U1Y | FR3D | 31 | 11 | 2.9 | 12-07-04 | ENTEROBACTERIO PHAGE MS2 | CRYSTAL STRUCTURE OF A COMPLEX BETWEEN WT BACTERIOPHAGE MS2 COAT PROTEIN AND AN F5 APTAMER RNA STEMLOOP WITH 2AMINOPURINE SUBSTITUTED AT THE-10 POSITION | W.T.HORN,M.A.CONVERY,N.J.STONEHOUSE,C.J.ADAMS,L.LILJAS, S.E.PHILLIPS,P.G.STOCKLEY | 5MSF |
1SI3 | FR3D | 18 | 6 | 2.6 | 5-25-04 | synthetic | CRYSTAL STRUCTURE OF THE PAZ DOMAIN OF HUMAN EIF2C1 IN COMPLEX WITH A 9-MER SIRNA-LIKE DUPLEX | K.YE,J.B.MA,D.PATEL | |
1F6U | FR3D | 360 | 109 | SOLUTION NMR | 10-09-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | NMR STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO STEM-LOOP SL2 OF THE PSI-RNA PACKAGING SIGNAL. IMPLICATIONS FOR GENOME RECOGNITION | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,K.J.CHANCELLOR, M.F.SUMMERS | |
1F5U | FR3D | 36 | 16 | SOLUTION NMR | 8-21-00 | synthetic | SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM- LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA | C.-H.KIM,I.TINOCO JR. | |
1ZEV | FR3D | 36 | 13 | 1.6 | 10-25-05 | synthetic | CRYSTAL STRUCTURE OF A PATHOGENIC RNA: CUG REPEATS | B.H.MOOERS,J.S.LOGUE,J.A.BERGLUND | 3GM7 |
2GVO | FR3D | 378 | 113 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF A PURINE RICH HEXALOOP HAIRPIN BELONGING TO PGY/MDR1 MRNA AND TARGETED BY ANTISENSE OLIGONUCLEOTIDES | F.JOLI,N.BOUCHEMAL,A.LAIGLE,B.HARTMANN,E.HANTZ | |
1AJF | FR3D | 18 | 8 | SOLUTION NMR | 7-07-97 | synthetic | SOLUTION STRUCTURE OF THE P5B STEM LOOP FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE | J.S.KIEFT,I.TINOCO JUNIOR | |
1Z30 | FR3D | 270 | 105 | SOLUTION NMR | 4-26-05 | synthetic | NMR STRUCTURE OF THE APICAL PART OF STEMLOOP D FROM CLOVERLEAF 1 OF BOVINE ENTEROVIRUS 1 RNA | Y.IHLE,O.OHLENSCHLAGER,E.DUCHARDT,R.RAMACHANDRAN,M.GORLACH | |
2GJW | FR3D | 71 | 32 | 2.9 | 9-12-06 | synthetic,synthetic,synthetic | RNA RECOGNITION AND CLEAVAGE BY AN SPLICING ENDONUCLEASE | S.XUE,K.CALVIN,H.LI | |
2OE5 | FR3D | 33 | 14 | 1.5 | 2-13-07 | synthetic,synthetic | .5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'- OVERHANG | T.HERMANN,V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 2OE8 2OE6 |
2JR4 | FR3D | 187 | 59 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E.COLI TRNA-VAL3 WITH NO MODIFICATIONS | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
2D18 | FR3D | 374 | 153 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2KPD | FR3D | 170 | 42 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV-MUTANT | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
2KRP | FR3D | 17 | 6 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG2(ACG) ANTICODON STEM AND LOOP | Y.BILBILLE,P.F.AGRIS | |
2KPC | FR3D | 170 | 56 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
1YN2 | FR3D | 187 | 66 | SOLUTION NMR | 1-24-06 | synthetic | SOLUTION STRUCTURE OF THE NEUROSPORA VS RIBOZYME STEM-LOOP V IN THE PRESENCE OF MGCL2 WITH MODELING OF BOUND MANGANESE IONS | D.O.CAMPBELL,P.LEGAULT | 1TBK 1YN1 |
2KVN | FR3D | 510 | 152 | SOLUTION NMR | 7-07-10 | synthetic | PHI29 E-LOOP HAIRPIN | S.M.HARRIS,S.J.SCHROEDER | |
1WKS | FR3D | 357 | 144 | SOLUTION NMR | 6-22-04 | synthetic | SOLUTION STRUCTURE OF AN RNA STEM-LOOP DERIVED FROM THE 3' CONSERVED REGION OF EEL LINE UNAL2 | S.BABA,M.KAJIKAWA,N.OKADA,G.KAWAI | |
2JLT | FR3D | 32 | 15 | 2.9 | 8-18-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN RNA KISSING COMPLEX | C.DIPRIMO,S.FRIBOURG | |
1R3E | FR3D | 50 | 20 | 2.1 | 11-04-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA-PROTEIN RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT | H.PAN,S.AGARWALLA,D.T.MOUSTAKAS,J.FINER-MOORE,R.M.STROUD | |
1JBS | FR3D | 34 | 12 | 2.0 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN AND A 29-MER SRD RNA ANALOG | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | |
1BZ3 | FR3D | 17 | 5 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | 1BZT |
1E7K | FR3D | 34 | 14 | 2.9 | 2-19-01 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL 15.5KD PROTEIN BOUND TO A U4 SNRNA FRAGMENT | I.VIDOVIC,S.NOTTROTT,K.HARTHMUTH,R.LUHRMANN,R.FICNER | |
1KKA | FR3D | 136 | 47 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
1BZ2 | FR3D | 17 | 6 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
1J4Y | FR3D | 17 | 6 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
2D19 | FR3D | 374 | 164 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2L6I | FR3D | 432 | 162 | SOLUTION NMR | 3-23-11 | synthetic | SOLUTION STRUCTURE OF CORONAVIRAL STEM-LOOP 2 (SL2) | C.LEE,L.LI,D.P.GIEDROC | |
1JTW | FR3D | 224 | 65 | SOLUTION NMR | 12-12-01 | synthetic | STRUCTURE OF SL4 RNA FROM THE HIV-1 PACKAGING SIGNAL | D.J.KERWOOD,M.J.CAVALUZZI,P.N.BORER | |
2D17 | FR3D | 330 | 141 | SOLUTION NMR | 11-01-05 | synthetic,synthetic | SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV- 1 DIMERIZATION INITIATION SITE | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3L26 | FR3D | 16 | 8 | 2.4 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | 333D |
420D | FR3D | 32 | 16 | 1.9 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES | B.PAN,S.N.MITRA,M.SUNDARALINGAM | 1YZD 1Z7F 1Z79 405D 2H1M 1YY0 |
406D | FR3D | 32 | 15 | 1.8 | 2-05-99 | engineered | '-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3' | S.A.SHAH,A.T.BRUNGER | |
1RXA | FR3D | 16 | 8 | 2.9 | 10-20-96 | synthetic | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | S.PORTMANN,N.USMAN,M.EGLI | |
1JWC | FR3D | 16 | 6 | SOLUTION NMR | 3-20-02 | synthetic | NMR SOLUTION STRUCTURE OF THE RNA HAIRPIN BINDING SITE FOR THE HISTONE STEM-LOOP BINDING PROTEIN | E.S.DEJONG,W.F.MARZLUFF,E.P.NIKONOWICZ | 1JU7 |
1BZU | FR3D | 16 | 4 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS, 3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
2KYD | FR3D | 640 | 320 | SOLUTION NMR | 7-07-10 | synthetic | RDC AND RCSA REFINEMENT OF AN A-FORM RNA: IMPROVEMENTS IN MAJOR GROOVE WIDTH | B.S.TOLBERT,M.F.SUMMERS,Y.MIYAZAKI,S.BARTON,B.KINDE,P.STARK,R.SINGH, A.BAX,D.CASE | |
2KRZ | FR3D | 160 | 39 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET | Y.BILBILLE,P.F.AGRIS | |
1N53 | FR3D | 25 | 8 | SOLUTION NMR | 4-29-03 | synthetic,synthetic | SOLUTION STRUCTURE OF B. SUBTILIS T BOX ANTITERMINATOR RNA | M.S.GERDEMAN,T.M.HENKIN,J.V.HINES | |
1LU3 | FR3D | 16 | 3 | 16.8 | 6-26-02 | SACCHAROMYCES CEREVISIAE | SEPARATE FITTING OF THE ANTICODON LOOP REGION OF TRNA (NUCLEOTIDE 26-42) IN THE LOW RESOLUTION CRYO-EM MAP OF AN EF-TU TERNARY COMPLEX (GDP AND KIRROMYCIN) BOUND TO E. COLI 70S RIBOSOME | M.VALLE,J.SENGUPTA,N.K.SWAMI,R.A.GRASSUCCI,N.BURKHARDT, K.H.NIERHAUS,R.K.AGRAWAL,J.FRANK | |
2RN1 | FR3D | 544 | 284 | SOLUTION NMR | 9-23-08 | synthetic,synthetic | LIQUID CRYSTAL SOLUTION STRUCTURE OF THE KISSING COMPLEX FORMED BY THE APICAL LOOP OF THE HIV TAR RNA AND A HIGH AFFINITY RNA APTAMER OPTIMIZED BY SELEX | H.VAN MELCKEBEKE,M.DEVANY,C.DI PRIMO,F.BEAURAIN,J.TOULME, D.L.BRYCE,J.BOISBOUVIER | 1KIS |
2PN9 | FR3D | 300 | 126 | SOLUTION NMR | 10-30-07 | synthetic,synthetic | NMR STRUCTURE OF A KISSING COMPLEX FORMED BETWEEN THE TAR RNA ELEMENT OF HIV-1 AND A LNA MODIFIED APTAMER | I.LEBARS,T.RICHARD,C.DI PRIMO,J.-J.TOULME | 2OOM |
1XWU | FR3D | 16 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF ACAUAGA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
1ZBH | FR3D | 32 | 10 | 3.0 | 9-26-06 | synthetic | '-END SPECIFIC RECOGNITION OF HISTONE MRNA STEM-LOOP BY 3'- EXONUCLEASE | Y.CHENG,D.J.PATEL | |
3AGV | FR3D | 25 | 2 | 2.1 | 11-10-10 | synthetic | CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX | Y.NOMURA,S.SUGIYAMA,T.SAKAMOTO,S.MIYAKAWA,H.ADACHI,K.TAKANO, S.MURAKAMI,T.INOUE,Y.MORI,Y.NAKAMURA,H.MATSUMURA | |
1T0K | FR3D | 27 | 11 | 3.2 | 7-20-04 | synthetic,synthetic | JOINT X-RAY AND NMR REFINEMENT OF YEAST L30E-MRNA COMPLEX | J.A.CHAO,J.R.WILLIAMSON | |
3DD2 | FR3D | 15 | 3 | 1.9 | 11-11-08 | synthetic | CRYSTAL STRUCTURE OF AN RNA APTAMER BOUND TO HUMAN THROMBIN | S.B.LONG,B.A.SULLENGER | |
2IZN | FR3D | 26 | 8 | 2.6 | 7-27-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (G-10) COMPLEX | C.HELGSTRAND,E.GRAHN,T.MOSS,N.J.STONEHOUSE,K.TARS, P.G.STOCKLEY,L.LILJAS | |
2AZ2 | FR3D | 30 | 12 | 2.6 | 10-11-05 | synthetic | FLOCK HOUSE VIRUS B2-DSRNA COMPLEX (P4122) | J.A.CHAO,J.H.LEE,B.R.CHAPADOS,E.W.DEBLER,A.SCHNEEMANN, J.R.WILLIAMSON | 2AZ0 |
1XWP | FR3D | 15 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF AUCGCA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
1QFQ | FR3D | 435 | 145 | SOLUTION NMR | 4-20-99 | ENTEROBACTERIA PHAGE LAMBDA | BACTERIOPHAGE LAMBDA N-PROTEIN-NUTBOXB-RNA COMPLEX | M.SCHAERPF,H.STICHT,P.ROESCH | 1HJI |
397D | FR3D | 27 | 11 | 1.3 | 9-11-98 | synthetic,synthetic | A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS- ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION- DEPENDENT BULGE CONFORMATION | J.A.IPPOLITO,T.A.STEITZ | |
1CSL | FR3D | 28 | 11 | 1.6 | 2-14-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE RRE HIGH AFFINITY SITE | J.A.IPPOLITO,T.A.STEITZ | |
1Q75 | FR3D | 300 | 120 | SOLUTION NMR | 12-23-03 | synthetic | SOLUTION STRUCTURE OF THE DYSKERATOSIS CONGENITA MUTANT P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,J.FEIGON | |
1OQ0 | FR3D | 300 | 120 | SOLUTION NMR | 5-13-03 | synthetic | P6.1 STEM LOOP FROM THE ACTIVATION DOMAIN OF HTR | T.LEEPER,N.LEULLIOT,G.VARANI | |
2F8K | FR3D | 15 | 6 | 2.0 | 1-24-06 | synthetic | SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1 | T.AVIV,Z.LIN,G.BEN-ARI,C.A.SMIBERT,F.SICHERI | |
1A4T | FR3D | 300 | 115 | SOLUTION NMR | 4-29-98 | synthetic | SOLUTION STRUCTURE OF PHAGE P22 N PEPTIDE-BOX B RNA COMPLEX, NMR, 20 STRUCTURES | Z.CAI,A.A.GORIN,R.FREDERICK,X.YE,W.HU,A.MAJUMDAR,A.KETTANI, D.J.PATEL | |
3EQT | FR3D | 16 | 8 | 2.0 | 3-10-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA | P.LI,X.LI | 3OG8 1DI2 1PBM 3JXQ 1RC7 3ADL 3JXR 1G3A 3LRN |
1KOD | FR3D | 25 | 6 | SOLUTION NMR | 11-08-96 | synthetic,synthetic | RNA APTAMER COMPLEXED WITH CITRULLINE, NMR | Y.S.YANG,M.KOCHOYAN,P.BURGSTALLER,E.WESTHOF,M.FAMULOK | |
1G2J | FR3D | 14 | 6 | 2.0 | 12-06-00 | synthetic | RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE | G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN, L.BEIGELMAN,M.EGLI | |
1F85 | FR3D | 280 | 68 | SOLUTION NMR | 11-17-00 | synthetic | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE | P.J.LUKAVSKY,G.A.OTTO,A.M.LANCASTER,P.SARNOW,J.D.PUGLISI | |
1TFY | FR3D | 73 | 30 | 3.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1ROQ | FR3D | 140 | 58 | SOLUTION NMR | 5-18-04 | synthetic | EXTENDING THE FAMILY OF UNCG-LIKE TETRALOOP MOTIFS: NMR STRUCTURE OF A CACG TETRALOOP FROM COXSACKIEVIRUS B3 | Z.DU,J.YU,R.ANDINO,T.L.JAMES | |
1MY9 | FR3D | 28 | 11 | SOLUTION NMR | 10-07-03 | synthetic | SOLUTION STRUCTURE OF A K+ CATION STABILIZED DIMERIC RNA QUADRUPLEX CONTAINING TWO G:G(:A):G:G(:A) HEXADS, G:G:G:G TETRADS AND UUUU LOOPS | H.LIU,A.MATSUGAMI,M.KATAHIRA,S.UESUGI | |
1A3M | FR3D | 540 | 202 | SOLUTION NMR | 4-29-98 | synthetic,synthetic | PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES | D.FOURMY,S.YOSHIZAWA,J.D.PUGLISI | |
2B3J | FR3D | 28 | 7 | 2.0 | 1-24-06 | synthetic | CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DEAMINASE, TADA, IN COMPLEX WITH RNA | H.C.LOSEY,A.J.RUTHENBURG,G.L.VERDINE | |
2XLI | FR3D | 13 | 5 | 2.3 | 9-22-10 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, MONOCLINIC FORM | R.E.HAURWITZ,M.JINEK,B.WIEDENHEFT,K.ZHOU,J.A.DOUDNA | 2XLK 2XLJ |
433D | FR3D | 28 | 14 | 2.1 | 12-04-98 | synthetic | CRYSTAL STRUCTURE OF A 14 BASE PAIR RNA DUPLEX WITH NONSYMMETRICAL TANDEM G.U WOBBLE BASE PAIRS | J.TRIKHA,D.J.FILMAN,J.M.HOGLE | |
2I91 | FR3D | 22 | 7 | 2.6 | 10-17-06 | synthetic,synthetic | KDA RO AUTOANTIGEN IN COMPLEX WITH A FRAGMENT OF MISFOLDED RNA | K.M.REINISCH,A.J.STEIN | |
1IK1 | FR3D | 14 | 5 | SOLUTION NMR | 7-18-01 | synthetic | SOLUTION STRUCTURE OF AN RNA HAIRPIN FROM HRV-14 | H.HUANG,A.ALEXANDROV,X.CHEN,T.W.BARNES III,H.ZHANG,K.DUTTA, S.M.PASCAL | |
2EVY | FR3D | 252 | 90 | SOLUTION NMR | 8-22-06 | synthetic | GNYA TETRANUCLEOTIDE LOOPS FOUND IN POLIOVIRUS ORIL BY IN VIVO SELEX (UN)EXPECTEDLY FORM A YNMG-LIKE STRUCTURE | W.J.G.MELCHERS,J.ZOLL,M.TESSARI,D.V.BAKHMUTOV,A.P.GMYL, V.I.AGOL,H.A.HEUS | |
3P59 | FR3D | 94 | 35 | 2.2 | 4-06-11 | synthetic,synthetic | FIRST CRYSTAL STRUCTURE OF A RNA NANOSQUARE | S.DIBROV,T.HERMANN,J.MCLEAN,J.PARSONS | |
3OIN | FR3D | 14 | 4 | 1.9 | 12-01-10 | synthetic | CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NEP1/EMG1 BOUND TO S- ADENOSYLHOMOCYSTEINE AND 1 MOLECULE OF COGNATE RNA | S.R.THOMAS,N.LARONDE-LEBLANC | 3OIJ |
1K4B | FR3D | 280 | 100 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
6MSF | FR3D | 24 | 8 | 2.8 | 7-08-98 | ENTEROBACTERIO PHAGE MS2,synthetic | F6 APTAMER MS2 COAT PROTEIN COMPLEX | M.A.CONVERY,S.ROWSELL,N.J.STONEHOUSE,A.D.ELLINGTON,I.HIRAO, J.B.MURRAY,D.S.PEABODY,S.E.V.PHILLIPS,P.G.STOCKLEY | |
1C0O | FR3D | 266 | 109 | SOLUTION NMR | 8-31-99 | TETRAHYMENA THERMOPHILA | SOLUTION STRUCTURE OF THE P5 HAIRPIN FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, 19 CONVERGED STRUCTURES | G.COLMENAREJO,I.TINOCO JR. | |
1FHK | FR3D | 210 | 80 | SOLUTION NMR | 3-21-01 | synthetic | NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI | S.V.MOROSYUK,P.R.CUNNINGHAM,J.SANTALUCIA JR. | |
1KOC | FR3D | 25 | 6 | SOLUTION NMR | 8-17-96 | synthetic,synthetic | RNA APTAMER COMPLEXED WITH ARGININE, NMR | Y.S.YANG,M.KOCHOYAN,P.BURGSTALLER,E.WESTHOF,M.FAMULOK | |
1MHK | FR3D | 26 | 9 | 2.5 | 9-06-02 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF A 26MER RNA MOLECULE, REPRESENTING A NEW RNA MOTIF, THE HOOK-TURN | S.SZEP,J.WANG,P.B.MOORE | |
1DUQ | FR3D | 104 | 44 | 2.1 | 5-16-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1 | L.-W.HUNG,E.L.HOLBROOK,S.R.HOLBROOK | |
1K4A | FR3D | 280 | 114 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGAA RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
2R93 | FR3D | 14 | 6 | 4.0 | 11-27-07 | synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
1RNA | FR3D | 28 | 14 | 2.2 | 4-15-91 | synthetic | CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2 | A.C.DOCK-BREGEON,B.CHEVRIER,A.PODJARNY,J.JOHNSON,J.S.DE BEAR,G.R.GOUGH,P.T.GILHAM,D.MORAS | |
7MSF | FR3D | 25 | 8 | 2.8 | 11-11-98 | ENTEROBACTERIO PHAGE MS2 | MS2 PROTEIN CAPSID/RNA COMPLEX | S.ROWSELL,N.J.STONEHOUSE,M.A.CONVERY,C.J.ADAMS, A.D.ELLINGTON,I.HIRAO,D.S.PEABODY,P.G.STOCKLEY, S.E.V.PHILLIPS | |
1L3Z | FR3D | 14 | 6 | 2.0 | 2-25-03 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER | K.SHI,B.PAN,M.SUNDARALINGAM | |
2KOC | FR3D | 280 | 120 | SOLUTION NMR | 12-01-09 | synthetic | NMR SOLUTION STRUCTURE OF A 14-MER HAIRPIN RNA WITH CUUCGG TETRALOOP | S.NOZINOVIC,B.FUERTIG,H.R.A.JONKER,C.RICHTER,H.SCHWALBE | |
1HS2 | FR3D | 13 | 4 | SOLUTION NMR | 8-29-01 | synthetic | SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAGU AS PART OF HAIRPIN R(GCGUUAAGUCGCA) | H.ZHANG,M.A.FOUNTAIN,T.R.KRUGH | 1HS8 1HS3 1HS4 1HS1 |
1NUJ | FR3D | 96 | 37 | 1.8 | 8-19-03 | synthetic,synthetic | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | J.E.WEDEKIND,D.B.MCKAY | 1NUV 429D |
3CGS | FR3D | 24 | 10 | 1.6 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND MAMMALIAN INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
1VOP | FR3D | 429 | 165 | SOLUTION NMR | 12-24-97 | synthetic | CONSERVED RNA COMPONENT OF THE PEPTIDYL TRANSFERASE CENTER, NMR, 33 STRUCTURES | E.V.PUGLISI,J.D.PUGLISI | |
1JZC | FR3D | 13 | 3 | SOLUTION NMR | 10-07-03 | synthetic | THE SOLUTION STRUCTURE OF THE MUTANT 5'AUG3' TRILOOP IN THE RNA PROMOTER REGION OF THE BROME MOSAIC VIRUS GENOMIC (+)- RNA | C.-H.KIM,C.C.KAO | |
1I4C | FR3D | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MINOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
1AM0 | FR3D | 128 | 19 | SOLUTION NMR | 7-23-97 | synthetic | AMP RNA APTAMER COMPLEX, NMR, 8 STRUCTURES | F.JIANG,R.A.KUMAR,R.A.JONES,D.J.PATEL | |
1FUF | FR3D | 26 | 12 | 1.7 | 11-09-01 | synthetic | CRYSTAL STRUCTURE OF A 14BP RNA OLIGONUCLEOTIDE CONTAINING DOUBLE UU BULGES: A NOVEL INTRAMOLECULAR U*(AU) BASE TRIPLE | J.DENG,Y.XIONG,C.SUDARSANAKUMAR,K.SHI,M.SUNDARALINGAM | 1IK5 |
3CGP | FR3D | 24 | 10 | 1.6 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE OF A PSEUDOURIDINE-CONTAINING YEAST SPLICEOSOMAL U2 SNRNA-INTRON BRANCH SITE DUPLEX BOUND TO IODIDE IONS | Y.LIN,C.L.KIELKOPF | 3CGQ |
1TFW | FR3D | 51 | 19 | 2.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1ESH | FR3D | 13 | 6 | SOLUTION NMR | 4-24-00 | synthetic | THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | C.-H.KIM,C.C.KAO,I.TINOCO JR. | 1I46 |
1K8S | FR3D | 25 | 12 | SOLUTION NMR | 11-14-01 | synthetic,synthetic | BULGED ADENOSINE IN AN RNA DUPLEX | V.THIVIYANATHAN,A.B.GULIAEV,N.B.LEONTIS,D.G.GORENSTEIN | |
1I4B | FR3D | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MAJOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
2R22 | FR3D | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | 2R21 2R1S 2R20 |
3CGR | FR3D | 24 | 10 | 2.1 | 7-01-08 | synthetic,synthetic | X-RAY STRUCTURE CONTAINING THE PSEUDOURIDYLATED U2 SNRNA AND INTRON BRANCH SITE CONSENSUS SEQUENCES | Y.LIN,C.L.KIELKOPF | |
3MQK | FR3D | 22 | 5 | 2.8 | 12-29-10 | synthetic,synthetic | CBF5-NOP10-GAR1 COMPLEX BINDING WITH 17MER RNA CONTAINING ACA TRINUCLEOTIDE | J.ZHOU,B.LIANG,H.LI | |
1ELH | FR3D | 150 | 59 | SOLUTION NMR | 1-31-94 | ESCHERICHIA COLI,ESCHERICHIA COLI | NMR ANALYSIS OF HELIX I FROM THE 5S RNA OF ESCHERICHIA COLI | S.WHITE,P.MOORE | |
1I9X | FR3D | 26 | 12 | 2.2 | 9-05-01 | synthetic | CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX | J.A.BERGLUND,M.ROSBASH,S.C.SCHULTZ | |
1ZSE | FR3D | 12 | 4 | 3.0 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 2BS1 2B2D 2BS0 |
354D | FR3D | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI,ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
3CJZ | FR3D | 24 | 10 | 1.8 | 10-14-08 | synthetic | EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS | P.S.PALLAN,C.KREUTZ,S.BOSIO,R.MICURA,M.EGLI | |
1YYW | FR3D | 96 | 48 | 2.8 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.8-ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
2RQJ | FR3D | 216 | 146 | SOLUTION NMR | 11-17-09 | synthetic | QUADRUPLEX STRUCTURE OF AN RNA APTAMER AGAINST BOVINE PRION PROTEIN | M.KATAHIRA,T.MASHIMA,A.MATSUGAMI,F.NISHIKAWA,S.NISHIKAWA | |
1ZIG | FR3D | 120 | 50 | SOLUTION NMR | 3-12-97 | synthetic | GAGA RNA TETRALOOP, NMR, 10 STRUCTURES | F.M.JUCKER,H.A.HEUS,P.F.YIP,E.MOORS,A.PARDI | 1ZIH 1ZIF |
1AFX | FR3D | 156 | 60 | SOLUTION NMR | 5-15-97 | synthetic | UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1SDR | FR3D | 48 | 24 | 2.6 | 2-27-95 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE | H.SCHINDELIN,M.ZHANG,R.BALD,J.-P.FUERSTE,V.A.ERDMANN, U.HEINEMANN | |
1AJL | FR3D | 19 | 6 | SOLUTION NMR | 7-07-97 | TETRAHYMENA THERMOPHILA,TETRAHYMENA THERMOPHILA | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
353D | FR3D | 24 | 11 | 2.4 | 11-10-97 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN A OF THERMUS FLAVUS 5S RRNA AND THE CONTRIBUTION OF WATER MOLECULES TO ITS STRUCTURE | C.BETZEL,S.LORENZ,J.P.FURSTE,R.BALD,M.ZHANG,T.R.SCHNEIDER, K.S.WILSON,V.A.ERDMANN | |
2KBP | FR3D | 240 | 98 | SOLUTION NMR | 3-24-09 | synthetic | SOLUTION STRUCTURE OF A G-QUADRUPLEX OF HUMAN TELOMERIC RNA | A.T.PHAN,H.MARTADINATA | |
2K7E | FR3D | 220 | 98 | SOLUTION NMR | 10-07-08 | synthetic,synthetic | NMR STRUCTURE OF THE HUMAN TRNALYS3 BOUND TO THE HIV GENOME LOOP I | Y.BILBILLE,F.P.A.VENDEIX,R.GUENTHER,A.MALKIEWICZ,X.ARIZA, J.VILARRASA,P.AGRIS | |
157D | FR3D | 24 | 12 | 1.8 | 5-31-94 | synthetic | CRYSTAL AND MOLECULAR STRUCTURE OF R(CGCGAAUUAGCG): AN RNA DUPLEX CONTAINING TWO G(ANTI).A(ANTI) BASE-PAIRS | G.A.LEONARD,K.E.MCAULEY-HECHT,S.EBEL,D.M.LOUGH,T.BROWN, W.N.HUNTER | 2Q1O 1YYO 1YYK 2G92 |
3FTM | FR3D | 46 | 18 | 2.7 | 2-24-09 | synthetic,synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 1 | J.N.PITT,A.R.FERRE-D'AMARE | 3FS0 |
205D | FR3D | 24 | 12 | 2.6 | 9-15-95 | engineered | STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP | K.J.BAEYENS,H.L.DE BONDT,S.R.HOLBROOK | |
1AJT | FR3D | 19 | 4 | SOLUTION NMR | 8-20-97 | synthetic,synthetic | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON, NMR, 1 STRUCTURE | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
1RNG | FR3D | 60 | 24 | SOLUTION NMR | 12-07-95 | synthetic | SOLUTION STRUCTURE OF THE CUUG HAIRPIN: A NOVEL RNA TETRALOOP MOTIF | F.M.JUCKER,A.PARDI | |
422D | FR3D | 24 | 8 | 2.6 | 6-03-03 | engineered | '-R(*GP*AP*UP*CP*AP*CP*UP*UP*CP*GP*GP*U)-3' | S.ESWARAMOORTHY,S.T.RAO,M.SUNDARALINGAM | |
1B7F | FR3D | 24 | 2 | 2.6 | 5-03-99 | synthetic | SXL-LETHAL PROTEIN/RNA COMPLEX | N.HANDA,O.NUREKI,K.KURIMOTO,I.KIM,H.SAKAMOTO,Y.SHIMURA, Y.MUTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1QBP | FR3D | 72 | 29 | 2.1 | 11-26-99 | synthetic | CRYSTAL STRUCTURE OF A BROMINATED RNA HELIX WITH FOUR MISMATCHED BASE PAIRS | A.C.ANDERSON,R.H.O'NEIL,D.J.FILMAN,C.A.FREDERICK | |
2F87 | FR3D | 156 | 52 | SOLUTION NMR | 8-08-06 | synthetic | SOLUTION STRUCTURE OF A GAAG TETRALOOP IN SRP RNA FROM PYROCOCCUS FURIOSUS | K.OKADA,M.TAKAHASHI,T.SAKAMOTO,K.NAKAMURA,A.KANAI,G KAWAI | |
280D | FR3D | 48 | 24 | 2.4 | 9-30-96 | engineered | THE STRUCTURE OF AN RNA DODECAMER SHOWS HOW TANDEM U-U BASE PAIRS INCREASE THE RANGE OF STABLE RNA STRUCTURES AND THE DIVERSITY OF RECOGNITION SITES | S.E.LIETZKE,C.L.BARNES,C.E.KUNDROT | |
1AL5 | FR3D | 288 | 144 | SOLUTION NMR | 12-17-97 | synthetic | A-TRACT RNA DODECAMER, NMR, 12 STRUCTURES | M.R.CONTE,G.L.CONN,T.BROWN,A.N.LANE | |
1KD5 | FR3D | 22 | 10 | 1.6 | 3-04-03 | synthetic | THE CRYSTAL STRUCTURE OF R(GGUCACAGCCC)2 METAL FREE FORM | V.KACER,S.A.SCARINGE,J.N.SCARSDALE,J.P.RIFE | 1KD4 1KD3 |
2NUG | FR3D | 44 | 20 | 1.7 | 11-20-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 1.7-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
1QCU | FR3D | 44 | 22 | 1.2 | 11-11-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
3LRR | FR3D | 22 | 9 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 12 BP AU RICH 5' PPP DSRNA | P.LI | |
1I3Y | FR3D | 378 | 146 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA. | J.D.PUGLISI,S.C.BLANCHARD | |
2KXZ | FR3D | 154 | 70 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'AAGU/3'UGAA | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1LNT | FR3D | 22 | 11 | 1.7 | 6-03-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP | J.DENG,Y.XIONG,B.PAN,M.SUNDARALINGAM | |
1TUT | FR3D | 22 | 11 | SOLUTION NMR | 12-28-04 | synthetic,synthetic | J4/5 LOOP FROM THE CANDIDA ALBICANS AND CANDIDA DUBLINIENSIS GROUP I INTRONS | B.M.ZNOSKO,S.D.KENNEDY,P.C.WILLE,T.R.KRUGH,D.H.TURNER | |
2KY0 | FR3D | 220 | 100 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'GAGC/3'CGAG | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1YZ9 | FR3D | 44 | 20 | 2.1 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III MUTANT E110Q FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.1- ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
1WTS | FR3D | 11 | 5 | SOLUTION NMR | 1-27-99 | synthetic | HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE | J.P.RIFE,P.B.MOORE | |
3IBK | FR3D | 22 | 12 | 2.2 | 5-12-10 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA QUADRUPLEX | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
2AWQ | FR3D | 160 | 38 | SOLUTION NMR | 1-17-06 | synthetic | SOLUTION STRUCTURE OF PSEUDOURIDINE-32 MODIFIED ANTICODON STEM-LOOP OF E. COLI TRNAPHE | J.CABELLO-VILLEGAS,E.P.NIKONOWICZ | |
2KRV | FR3D | 150 | 50 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG1 (ICG) ASL CONTAINING THE 2-THIOCYTIDINE MODIFICATION | Y.BILBILLE,P.F.AGRIS | 2KRQ 2KRW |
2KY1 | FR3D | 220 | 100 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'UAGA/3'AGAU | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
3NCU | FR3D | 22 | 10 | 2.5 | 6-30-10 | synthetic | STRUCTURAL AND FUNCTIONAL INSIGHTS INTO PATTERN RECOGNITION BY THE INNATE IMMUNE RECEPTOR RIG-I | G.SHENG,H.LI | |
2JXQ | FR3D | 200 | 100 | SOLUTION NMR | 5-20-08 | synthetic,synthetic | NMR STRUCTURE OF RNA DUPLEX | L.POPENDA,R.W.ADAMIAK,Z.GDANIEC | 2JXS |
1LMV | FR3D | 190 | 86 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE UNMODIFIED U2 SNRNA-INTRON BRANCH SITE HELIX FROM S. CEREVISIAE | M.I.NEWBY,N.L.GREENBAUM | |
2JRG | FR3D | 165 | 58 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 2 MODIFICATIONS (CMO5U34 M6A37) | F.A.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | 2JSG |
1FEQ | FR3D | 176 | 59 | SOLUTION NMR | 11-22-00 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF TRNA(LYS3) WITH T6A MODIFICATION AT POSITION 37 | J.W.STUART,Z.GDANIEC,R.H.GUENTHER,M.MARSZALEK,E.SOCHACKA, A.MALKIEWICZ,P.F.AGRIS | |
3HGA | FR3D | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
1XV0 | FR3D | 627 | 277 | SOLUTION NMR | 11-09-04 | synthetic,synthetic | SOLUTION NMR STRUCTURE OF RNA INTERNAL LOOP WITH THREE CONSECUTIVE SHEARED GA PAIRS IN 5'GGUGGAGGCU/3'PCCGAAGCCG | G.CHEN,B.M.ZNOSKO,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | 2DD1 |
1F5G | FR3D | 520 | 260 | SOLUTION NMR | 6-26-00 | synthetic | THE G7(SYN)-G4(ANTI) STRUCTURE OF R(GCAGGCGUGC)2 | M.E.BURKARD,D.H.TURNER | 1F5H |
1A34 | FR3D | 20 | 9 | 1.8 | 4-29-98 | synthetic,TOBACCO NECROSIS SATELLITE VIRUS | SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEX | S.B.LARSON,J.DAY,A.J.GREENWOOD,A.MCPHERSON | |
2DD2 | FR3D | 513 | 217 | SOLUTION NMR | 6-13-06 | synthetic,synthetic | AN ALTERNATING SHEARED AA PAIR IN 5'GGUGAAGGCU/3'PCCGAAGCCG: I. THE MAJOR CONFORMATION WITH A6/A15/A16 STACK | G.CHEN,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | |
1DQH | FR3D | 19 | 9 | 1.7 | 11-13-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS | Y.XIONG,M.SUNDARALINGAM | 1DQF |
1IDV | FR3D | 100 | 24 | SOLUTION NMR | 10-05-01 | synthetic | NMR STRUCTURE OF HCV IRES RNA DOMAIN IIIC | K.KALUARACHCHI,R.RIJNBRAND,S.M.LEMON,D.G.GORENSTEIN | |
1RRR | FR3D | 200 | 100 | SOLUTION NMR | 4-22-98 | synthetic,synthetic | RNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURES | J.I.GYI,A.N.LANE,G.L.CONN,T.BROWN | 404D 1OO7 1RRD |
2G1G | FR3D | 320 | 100 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF THE ANTICODON LOOP OF S. POMBE TRNAI INCLUDING THE NATURALLY OCCURRING N6-THREONYL ADENINE | E.LESCRINIER | |
3ADI | FR3D | 20 | 9 | 3.2 | 5-26-10 | synthetic,synthetic | STRUCTURE OF ARABIDOPSIS HYL1 AND ITS MOLECULAR IMPLICATIONS FOR MIRNA PROCESSING | Y.A.YUAN,H.Y.CHEN | |
2R92 | FR3D | 19 | 8 | 3.8 | 11-27-07 | synthetic,synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH ARTIFICIAL RDRP SCAFFOLD | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
2DD3 | FR3D | 342 | 137 | SOLUTION NMR | 6-13-06 | synthetic,synthetic | AN ALTERNATING SHEARED AA PAIR IN 5'GGUGAAGGCU/3'PCCGAAGCCG: II. THE MINOR CONFORMATION WITH A6/A5/A16 STACK | G.CHEN,S.D.KENNEDY,T.R.KRUGH,D.H.TURNER | |
3NJ7 | FR3D | 60 | 24 | 1.9 | 8-25-10 | synthetic | .9 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
1LPW | FR3D | 162 | 76 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE YEAST SPLICEOSOMAL U2 SNRNA- INTRON BRANCH SITE HELIX FEATURING A CONSERVED PSEUDOURIDINE | M.I.NEWBY,N.L.GREENBAUM | |
3BSO | FR3D | 16 | 7 | 1.7 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO CYTIDINE 5'-TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | 3H5X 3H5Y |
2L8U | FR3D | 18 | 8 | SOLUTION NMR | 2-23-11 | synthetic | NMR SPECTROSCOPY AND MOLECULAR DYNAMICS SIMULATION OF R(CCGCUGCGG)2 REVEAL A DYNAMIC UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH ONE HYDROGEN BOND PAIR | R.PARKESH,M.A.FOUNTAIN,M.D.DISNEY | |
2IRN | FR3D | 270 | 116 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
2JRQ | FR3D | 176 | 56 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 1 MODIFICATION (CMO5U34) | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
1ZH5 | FR3D | 18 | 4 | 1.9 | 1-17-06 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN | M.TEPLOVA,Y.R.YUAN,S.ILIN,L.MALININA,A.T.PHAN,A.TEPLOV, D.J.PATEL | 1YTY |
1G2E | FR3D | 9 | 1 | 2.3 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA | X.WANG,T.M.T.HALL | |
2KY2 | FR3D | 180 | 80 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'UAGG/3'GGAU | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1YVP | FR3D | 21 | 5 | 2.2 | 6-07-05 | synthetic,synthetic | RO AUTOANTIGEN COMPLEXED WITH RNAS | A.J.STEIN,G.FUCHS,C.FU,S.L.WOLIN,K.M.REINISCH | |
2KRY | FR3D | 150 | 40 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET ASL CONTAINING THE 5-FORMYLCYTIDINE MODIFICATION IN POSITION 34 | Y.BILBILLE,P.F.AGRIS | |
2H49 | FR3D | 360 | 160 | SOLUTION NMR | 11-21-06 | synthetic,synthetic | THE NMR STRUCTURE OF AN INTERNAL LOOP FROM 23S RIBOSOMAL RNA OF DEINOCOCCUS RADIODURANS DIFFERS FROM THE STRUCTURE IN THE CRYSTAL OF THE RIBOSOMAL SUBUNIT | N.SHANKAR | |
2AO5 | FR3D | 36 | 16 | 2.1 | 3-28-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX R(GGCGBRUGCGCU)2 WITH TERMINAL AND INTERNAL TANDEM G-U BASE PAIRS | R.UTSUNOMIYA,K.SUTO,D.BALASUNDARESAN,A.FUKAMIZU,P.K.KUMAR, H.MIZUNO | |
1MUV | FR3D | 18 | 8 | SOLUTION NMR | 12-18-02 | synthetic | SHEARED A(ANTI)-A(ANTI) BASE PAIRS IN A DESTABILIZING 2X2 INTERNAL LOOP: THE NMR STRUCTURE OF 5'(RGGCAAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,S.J.SCHROEDER,T.R.KRUGH,D.H.TURNER | |
2IRO | FR3D | 270 | 105 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
2K41 | FR3D | 170 | 80 | SOLUTION NMR | 11-04-08 | synthetic,synthetic | NMR STRUCTURE OF URIDINE BULGED RNA DUPLEX | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
2L8W | FR3D | 18 | 9 | SOLUTION NMR | 2-23-11 | synthetic | R(CCGCUGCGG)2 UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH TWO HYDROGEN BOND PAIRS | R.PARKESH,M.FOUNTAIN,M.DISNEY | 2L8C |
1C4L | FR3D | 18 | 9 | SOLUTION NMR | 8-09-00 | synthetic,synthetic | SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE- PAIR | Y.TANAKA,C.KOJIMA,T.YAMAZAKI,T.S.KODAMA,K.YASUNO, S.MIYASHITA,A.M.ONO,A.S.ONO,M.KAINOSHO,Y.KYOGOKU | |
1RAU | FR3D | 24 | 16 | SOLUTION NMR | 1-31-94 | synthetic | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | C.CHEONG,P.B.MOORE | 3KMQ 1WTT 3KLV 3KNA 2E9T 1ME1 3KOA 3KMS 2E9Z 2E9R 1WNE 2EC0 1QLN |
2K3Z | FR3D | 170 | 87 | SOLUTION NMR | 11-04-08 | synthetic,synthetic | NMR STRUCTURE OF ADENOSINE BULGED RNA DUPLEX WITH C:G-A TRIPLE | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
2G91 | FR3D | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2KD4 | FR3D | 16 | 8 | SOLUTION NMR | 4-07-09 | synthetic | SOLUTION STRUCTURE AND THERMODYNAMICS OF 2',5' RNA INTERCALATION | E.D.HOROWITZ,S.LILAVIVAT,B.W.HOLLADAY,M.W.GERMANN,N.V.HUD | |
2GQ6 | FR3D | 32 | 16 | 1.3 | 6-27-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2G32 2GQ7 2GQ4 2GPM |
1MV2 | FR3D | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, FACE-TO-FACE AP PAIRS IN 5'(RGGCAPGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
2BGG | FR3D | 29 | 10 | 2.2 | 3-31-05 | synthetic,synthetic | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX. | J.S.PARKER,S.M.ROE,D.BARFORD | |
1QET | FR3D | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | |
1MIS | FR3D | 16 | 8 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-R(GP*CP*GP*GP*AP*CP*GP*C)-3') ANTI- PARALLEL RNA DUPLEX WITH TANDEM G:A MISMATCHES, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,D.H.TURNER | |
1JZV | FR3D | 30 | 15 | 1.7 | 11-11-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA | Y.XIONG,C.SUDARSANAKUMAR,J.DENG,B.PAN,M.SUNDARALINGAM | |
402D | FR3D | 16 | 8 | 2.3 | 6-16-98 | synthetic | '-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' | S.B.JANG,L.-W.HUNG,Y.-I.CHI,E.L.HOLBROOK,R.CARTER, S.R.HOLBROOK | |
2OJ8 | FR3D | 80 | 30 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP OF THE HEPATITIS B VIRUS | F.C GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
1J6S | FR3D | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | 1D0T 1R3X 1GUC |
2IXZ | FR3D | 96 | 24 | SOLUTION NMR | 9-06-06 | synthetic | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
1MV1 | FR3D | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, SHEARED PA PAIRS IN 5'(RGGCPAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
398D | FR3D | 24 | 8 | 1.9 | 10-06-98 | synthetic | '-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS- STRAND SYNTHESIS OF HIV REPLICATION | U.MUELLER,G.MEIER,A.MOCHI-ONORI,L.CELLAI,H.HEUMANN | |
1MWG | FR3D | 16 | 8 | SOLUTION NMR | 3-12-97 | synthetic | STRUCTURE OF RIBONUCLEIC ACID, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,J.SANTALUCIA,D.H.TURNER | |
472D | FR3D | 16 | 8 | 1.9 | 11-27-00 | synthetic,synthetic | STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS | J.DENG,M.SUNDARALINGAM | |
3GLP | FR3D | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
435D | FR3D | 28 | 14 | 1.4 | 6-14-99 | synthetic,synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | 3M85 3M7N 2XPJ 2WJ8 259D 2FZ2 1RXB |
2OJ7 | FR3D | 80 | 21 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP | F.C.GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
2GBH | FR3D | 75 | 35 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF STEM REGION OF HELIX-35 OF 23S E.COLI RIBOSOMAL RNA (RESIDUES 736-760) | A.BAX,J.BOISBOUVIER,D.BRYCE,A.GRISHAEV,C.JARONIEC,E.MICLET, E.NIKONOVICZ,E.O'NEIL-CABELLO,J.YING | |
2G3S | FR3D | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | 1EKD |
3BSN | FR3D | 16 | 6 | 1.8 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO 5-NITROCYTIDINE TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | |
1N35 | FR3D | 13 | 5 | 2.5 | 12-25-02 | synthetic,synthetic | LAMBDA3 ELONGATION COMPLEX WITH FOUR PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | 1N1H 1UON |
1YFV | FR3D | 16 | 8 | SOLUTION NMR | 10-15-97 | synthetic | STRUCTURE OF (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')2 BY 2-D NMR, 1 STRUCTURE | J.SANTALUCIA JUNIOR,D.H.TURNER | 1SA9 |
1ZDJ | FR3D | 16 | 4 | 2.9 | 7-08-98 | ENTEROBACTERIO PHAGE MS2 | STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX | E.GRAHN,N.STONEHOUSE,K.VALEGARD,S.VANDENWORM,L.LILJAS | |
439D | FR3D | 16 | 8 | 1.6 | 9-14-01 | synthetic,synthetic | '-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R(*CP*CP*GP*CP*CP*UP*GP*G)-3' | M.PERBANDT,S.LORENZ,M.VALLAZZA,V.A.ERDMANN,C.BETZEL | |
1J9H | FR3D | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
438D | FR3D | 16 | 8 | 2.5 | 5-12-99 | synthetic | STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS | K.SHI,M.C.WAHL,M.SUNDARALINGAM | |
1BYX | FR3D | 240 | 61 | SOLUTION NMR | 10-20-99 | synthetic | CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION | T.SZYPERSKI,M.GOETTE,M.BILLETER,E.PEROLA,L.CELLAI | |
1EKA | FR3D | 16 | 8 | SOLUTION NMR | 11-13-00 | synthetic | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | X.CHEN,J.A.MCDOWELL,R.KIERZEK,T.R.KRUGH,D.H.TURNER | |
1FXL | FR3D | 8 | 1 | 1.8 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA | X.WANG,T.M.T.HALL | |
1QES | FR3D | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | 176D |
165D | FR3D | 16 | 8 | 1.6 | 8-31-94 | synthetic | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | W.CRUSE,P.SALUDJIAN,E.BIALA,P.STRAZEWSKI,T.PRANGE,O.KENNARD | |
3L25 | FR3D | 16 | 8 | 2.0 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
2VUQ | FR3D | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | 2JLV 1FL8 2L9E 2JLY 2K65 2JLU 2JLW 2JLX 2O81 2JLZ 2W89 |
2VAL | FR3D | 28 | 14 | 2.0 | 10-16-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX AT 2.0 ANGSTROM RESOLUTION | C.FORSTER,A.B.E.BRAUER,M.PERBANDT,D.LEHMANN,J.P.FURSTE, C.BETZEL,V.A.ERDMANN | |
2V6W | FR3D | 14 | 7 | 1.8 | 11-06-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | TRNASER ACCEPTOR STEM: CONFORMATION AND HYDRATION OF A MICROHELIX IN A CRYSTAL STRUCTURE AT 1.8 ANGSTROM RESOLUTION | C.FOERSTER,A.B.E.BRAUER,S.BRODE,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN | 2E2I 3GTJ 2NVQ 2E2H 2YU9 3GTM 3GTL 1R9S 1SFO 2KYE 3GTP 2NVZ 1R9T 3GTQ 2NVX 3GTG 3GTO 2E2J |
409D | FR3D | 42 | 18 | 2.5 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES | B.PAN,S.N.MITRA,L.SUN,D.HART,M.SUNDARALINGAM | |
1SAQ | FR3D | 14 | 6 | 2.7 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE RNA OCTAMER GIC(GA)GCC | S.B.JANG,K.BAEYENS,M.S.JEONG,J.SANTALUCIA JR,D.TURNER, S.R.HOLBROOK | |
3GVN | FR3D | 14 | 7 | 1.2 | 7-28-09 | synthetic,synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
2ERR | FR3D | 210 | 28 | SOLUTION NMR | 1-10-06 | HOMO SAPIENS | NMR STRUCTURE OF THE RNA BINDING DOMAIN OF HUMAN FOX-1 IN COMPLEX WITH UGCAUGU | F.H.ALLAIN,S.D.AUWETER | |
466D | FR3D | 28 | 14 | 1.2 | 8-16-99 | synthetic,synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 464D 434D |
2V7R | FR3D | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
2A0P | FR3D | 14 | 6 | 1.9 | 8-16-05 | synthetic | CRYSTAL STRUCTURE OF RNA OLIGOMER CONTAINING 4'-THIORIBOSE | P.HAEBERLI,I.BERGER,P.S.PALLAN,M.EGLI | |
2ADC | FR3D | 240 | 1 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD34 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
2AD9 | FR3D | 120 | 17 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD1 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
1OSU | FR3D | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
2GXB | FR3D | 12 | 6 | 2.2 | 5-01-07 | synthetic | CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA | A.ATHANASIADIS,D.PLACIDO,A.RICH | 1T4X |
1J8G | FR3D | 24 | 20 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
3MDI | FR3D | 6 | 1 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UGUAAA | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3G9Y | FR3D | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
1I9K | FR3D | 24 | 3 | SOLUTION NMR | 5-30-01 | synthetic | THE RNA I-MOTIF | K.SNOUSSI,S.NONIN-LECOMTE,J.L.LEROU | |
3MDG | FR3D | 6 | 1 | 2.2 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UUGUAU | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | 3Q2T |
1N38 | FR3D | 7 | 2 | 2.8 | 12-25-02 | synthetic,synthetic | REOVIRUS POLYMERASE LAMBDA3 ELONGATION COMPLEX WITH ONE PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | |
2O83 | FR3D | 252 | 108 | SOLUTION NMR | 7-10-07 | synthetic | THE STRUCTURE OF TANDEM GA RNA PAIRS WHEN FLANKING PAIRS ARE ISOG-ISOC PAIRS | S.D.KENNEDY,D.H.TURNER | 1LUU 1LUX |
2O32 | FR3D | 280 | 50 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM HUMAN, CONTAINING MODIFIED NUCLEOTIDES | D.G.SASHITAL,V.VENDITTI,C.G.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
377D | FR3D | 20 | 8 | 1.8 | 8-10-98 | synthetic | '-R(*CP*GP*UP*AP*CP*DG)-3' | R.BISWAS,S.N.MITRA,M.SUNDARALINGAM | |
1KOS | FR3D | 120 | 40 | SOLUTION NMR | 10-22-99 | synthetic | SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION | K.M.KOSHLAP,R.GUENTHER,E.SOCHACKA,A.MALKIEWICZ,P.F.AGRIS | |
1P79 | FR3D | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
1YTU | FR3D | 9 | 4 | 2.5 | 4-05-05 | synthetic,synthetic | STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN | J.B.MA,Y.R.YUAN,G.MEISTER,Y.PEI,T.TUSCHL,D.J.PATEL | |
2L5D | FR3D | 100 | 1 | SOLUTION NMR | 4-20-11 | HOMO SAPIENS | SOLUTION STRUCTURES OF HUMAN PIWI-LIKE 1 PAZ DOMAIN WITH SSRNA (5'- PUGACA) | L.ZENG,Q.ZHANG,K.YAN,M.ZHOU | |
2AWE | FR3D | 39 | 24 | 2.1 | 2-07-06 | engineered | BASE-TETRAD SWAPPING RESULTS IN DIMERIZATION OF RNA QUADRUPLEXES: IMPLICATIONS FOR FORMATION OF I-MOTIF RNA OCTAPLEX | B.PAN,K.SHI,M.SUNDARALINGAM | |
2GRB | FR3D | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
1MDG | FR3D | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |