PDBID | FR3D analysis | Chain(s) | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
3IZ9 | FR3D | ABC | 3472 | 1317 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3O58 | FR3D | 123 | 3485 | 1088 | 4.0 | 12-15-10 | SACCHAROMYCES CEREVISIAE S288C,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | YEAST 80S RIBOSOME. THIS ENTRY CONSISTS OF THE 60S SUBUNIT OF THE FIRST 80S IN THE ASYMMETRIC UNIT. | A.BEN-SHEM,L.JENNER,G.YUSUPOVA,M.YUSUPOV | 3O5H |
3IZF | FR3D | ABC | 3436 | 1231 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME (WITH ES27L-IN CONFORMATION) | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3JYX | FR3D | 345 | 3440 | 684 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 60S RRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
3PYO | FR3D | AB | 2879 | 1288 | 3.5 | 2-09-11 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 FROM THE PSIV IGR IRES RNA BOUND TO THE 70S RIBOSOME. THIS FILE CONTAINS THE 50S SUBUNIT OF THE FIRST 70S RIBOSOME. | J.ZHU,A.KOROSTELEV,D.COSTANTINO,H.F.NOLLER,J.S.KIEFT | 2XG2 2Y19 2XTG 3FIN 2Y17 2J03 3D5D 3I9C 2WDJ 3OH5 2V47 3KIR 2WRR 2WDN 2HGU 3F1F 3OHZ 3MRZ 2WDI 2Y0X 2HGJ 3KNO 2WRJ 3PYR 2Y11 2B66 1VSP 3KIT 3KNK 2WRO 3OI3 3PYV 3KIW 3OHK 2XQE 3HUX 2XUX 2WH2 2X9U 2V49 3I9E 3D5B 2Y15 1VSA 3I8I 2Y0V 3KNI 2WDL 1YL3 2XG0 3MS1 3F1H 3OHJ 3PYT 2B9N 3HUZ 2HGQ 2WH4 2Y0Z 3KIY 3OI1 2X9S 2WRL 3I8F 3OH7 3KNM 2B9P 2J01 2Y13 3OI5 |
2QBG | FR3D | AB | 2958 | 1357 | 3.3 | 9-25-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI IN COMPLEX WITH RIBOSOME RECYCLING FACTOR (RRF). THIS FILE CONTAINS THE 50S SUBUNIT OF THE SECOND 70S RIBOSOME, WITH RRF BOUND. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | M.A.BOROVINSKAYA,R.D.PAI,W.ZHANG,B.-S.SCHUWIRTH,J.M.HOLTON, G.HIROKAWA,H.KAJI,A.KAJI,J.H.D.CATE | 3OFC 3OFZ 3ORB 2QOZ 3FIK 2QAM 3IZU 3I1T 3IZT 3OFD 3I20 3DF4 3BBX 3OFR 2Z4N 2VHM 2QP1 3I1N 2WWQ 2QBA 3OAS 1VS8 1VT2 2QBI 2Z4L 2I2T 2VHN 2I2V 2GYA 2QBE 3E1D 3I1R 3OG0 2GYC 2J28 2QOX 2AW4 3DF2 3J01 3I22 3E1B 1VS6 2QOV 3KCR 2AWB 3OAT 2QAO 3OFQ 2QBK 3I1P 2QBC |
1C2W | FR3D | B | 2891 | 846 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
1PNU | FR3D | 09 | 2943 | 938 | 8.7 | 7-15-03 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF A STREPTOMYCIN DEPENDENT RIBOSOME FROM ESCHERICHIA COLI, 50S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNU, CONTAINS ONLY MOLECULES OF THE 50S RIBOSOMAL SUBUNIT. THE 30S SUBUNIT, MRNA, P-SITE TRNA, AND A-SITE TRNA ARE IN THE PDB FILE 1PNS. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VP0 1VOW 1PNY 1VOR 1VOY 1VOU |
2ZJR | FR3D | XY | 2808 | 1180 | 2.9 | 6-17-08 | DEINOCOCCUS RADIODURANS,DEINOCOCCUS RADIODURANS | REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS | J.M.HARMS,D.N.WILSON,F.SCHLUENZEN,S.R.CONNELL,T.STACHELHAUS, Z.ZABOROWSKA,C.M.T.SPAHN,P.FUCINI | 2O43 1JZZ 2AAR 1OND 1J5A 3FWO 2OGM 3DLL 2D3O 2O44 2ZJP 3PIP 1NWX 1K01 1NJO 1P9X 2OGN 1NWY 1Z58 2O45 1NJM 1NJP 2ZJQ 2OGO 1NKW 3JQ4 1JZY 3PIO 1Y69 1XBP 1JZX 1SM1 1NJN 3CF5 |
1S1I | FR3D | 34 | 2916 | 1316 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1I, CONTAINS 60S SUBUNIT. THE 40S RIBOSOMAL SUBUNIT IS IN FILE 1S1H. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1S72 | FR3D | 09 | 2871 | 1376 | 2.4 | 6-15-04 | HALOARCULA MARISMORTUI,HALOARCULA MARISMORTUI | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | D.J.KLEIN,T.M.SCHMEING,P.B.MOORE,T.A.STEITZ | 1VQK 2QEX 1VQ4 1NJI 1K9M 3CCL 1VQO 1Q86 3CCQ 1M90 3CD6 1VQ8 1KC8 1K73 1Q82 3I55 3CC7 1YJW 1M1K 1KQS 2OTJ 1K8A 1W2B 3CCM 1VQ7 1VQ9 1QVG 1YI2 3I56 3CC4 3G71 1VQN 3CMA 3CCJ 3G4S 1N8R 3CCS 1YHQ 1VQ6 1VQM 2OTL 1FFZ 1JJ2 2QA4 3CCV 1FG0 1YJ9 3CPW 1Q7Y 1QVF 1YIJ 1FFK 3CCR 1Q81 1VQL 3CXC 1VQ5 3CCE 3CC2 1KD1 1VQP 1YIT 3G6E 3CME 3CCU 1YJN |
3BBO | FR3D | ABC | 2952 | 824 | 9.4 | 5-27-08 | SPINACEA OLERACEA,SPINACEA OLERACEA,SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 50S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
3IZE | FR3D | ABC | 1582 | 438 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | 3O30 3O2Z |
3JYV | FR3D | 7A | 1820 | 506 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 40S RRNA AND PROTEINS AND P/E TRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
2XZM | FR3D | A | 1745 | 555 | 3.9 | 1-19-11 | TETRAHYMENA THERMOPHILA | CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1 | J.RABL,M.LEIBUNDGUT,S.F.ATAIDE,A.HAAG,N.BAN | 2XZN |
2AW7 | FR3D | A | 1530 | 686 | 3.5 | 11-08-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF THE SECOND 70S RIBOSOME. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | B.S.SCHUWIRTH,M.A.BOROVINSKAYA,C.W.HAU,W.ZHANG,A.VILA- SANJURJO,J.M.HOLTON,J.H.D.CATE | 3I1M 3E1C 2QOW 2QP0 1VS7 2Z4K 3J00 2I2P 2WWL 3I1Z 2QBD 3OAQ 2AVY 2I2U 2VHO 2QAN 3FIH 3I1Q 3OFB 2QBF 3IZV 2QBH 3OAR 3ORA 2GYB 3KC4 2VHP 1VS5 3OFX 3E1A 2QBJ 3OR9 3IZW 2QBB 2QAL 3OFA 3I1O 3OFP 3DF1 2GY9 3OFY 3DF3 3I1S 2QB9 3OFO 2Z4M 2QOY 2QOU 3I21 |
1PNX | FR3D | A | 1533 | 661 | 9.5 | 7-15-03 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE WILD TYPE RIBOSOME FROM E. COLI, 30S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNX, CONTAINS ONLY MOLECULES OF THE 30S RIBOSOMAL SUBUNIT. THE 50S SUBUNIT IS IN THE PDB FILE 1PNY. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VOS 1VOV 1VOZ 1VOX 1VOQ 1PNS |
1FJG | FR3D | AX | 1513 | 690 | 3.0 | 9-25-00 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | A.P.CARTER,W.M.CLEMONS JR.,D.E.BRODERSEN,B.T.WIMBERLY, R.J.MORGAN-WARREN,V.RAMAKRISHNAN | 3KNN 2UUC 2WH3 2HGP 1HR0 2Y0Y 2XQD 1I96 3F1G 3FIC 2X9T 2WRI 2OW8 3I8G 2V46 2WRN 3OHD 2XSY 1I95 2Y12 1N34 3HUY 3OI2 2XG1 1YL4 2UUB 2HHH 2VQF 3KNH 1HNZ 2Y16 3I9D 2Y18 3MR8 3OHY 3MS0 1XMO 1I97 3OGE 2UXB 2VQE 3F1E 2WDM 1HNX 2E5L 2B9M 2XFZ 2Y0W 1IBM 3PYQ 2ZM6 2Y10 2WH1 2UXC 1XNR 3KIX 2UUA 2X9R 1N32 2J00 3PYU 3HUW 1FKA 3PYN 2XUY 3OI0 3KIS 3KNL 1IBL 3D5A 2WRK 3OTO 3OI4 2HGR 2HGI 2WDG 3OGY 1XNQ 2B9O 2Y14 1HNW 2WDK 3D5C 2J02 3KIQ 3OHC 2F4V 3KNJ 1N36 2Y0U 2QNH 3I8H 2V48 1XMQ 1I94 1IBK 3I9B 2B64 3KIU 1N33 1J5E 2WRQ 2UXD 3PYS 2WDH 2UU9 |
3IZ7 | FR3D | ABC | 1586 | 477 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3BBN | FR3D | A | 1478 | 544 | 9.4 | 5-13-08 | SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME. | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
1S1H | FR3D | A | 1466 | 626 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1H, CONTAINS 40S SUBUNIT. THE 60S RIBOSOMAL SUBUNIT IS IN FILE 1S1I. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1H1K | FR3D | IJKLMN | 1906 | 953 | 10.0 | 9-26-02 | BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA | J.M.DIPROSE,J.M.GRIMES,G.C.SUTTON,J.N.BURROUGHS,A.MEYER, S.MAAN,P.P.C.MERTENS,D.I.STUART | |
3G78 | FR3D | AZ | 398 | 181 | 2.8 | 2-16-10 | OCEANOBACILLUS IHEYENSIS,synthetic | INSIGHT INTO GROUP II INTRON CATALYSIS FROM REVISED CRYSTAL STRUCTURE | J.WANG | 3EOH 3EOG 3BWP 3IGI |
3IZ4 | FR3D | A | 377 | 105 | 13.6 | 10-20-10 | ESCHERICHIA COLI | MODIFIED E. COLI TMRNA IN THE RESUME STATE WITH THE TRNA-LIKE DOMAIN IN THE RIBOSOMAL P SITE INTERACTING WITH THE SMPB | Y.HASHEM,J.FU,J.FRANK | |
3IYR | FR3D | A | 349 | 54 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3IYQ | FR3D | A | 349 | 58 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3Q1Q | FR3D | BC | 423 | 171 | 3.8 | 3-09-11 | synthetic,synthetic | STRUCTURE OF A BACTERIAL RIBONUCLEASE P HOLOENZYME IN COMPLEX WITH TRNA | N.J.REITER,A.OSTERMAN,A.TORRES-LARIOS,K.K.SWINGER,T.PAN,A.MONDRAGON | 3Q1R 2A2E |
2A64 | FR3D | A | 298 | 117 | 3.3 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF BACTERIAL RIBONUCLEASE P RNA | A.V.KAZANTSEV,A.A.KRIVENKO,D.J.HARRINGTON,S.R.HOLBROOK, P.D.ADAMS,N.R.PACE | |
2J37 | FR3D | AZ | 408 | 164 | 8.0 | 11-08-06 | HALOARCULA MARISMORTUI,TRITICUM SP. | MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS | M.HALIC,M.BLAU,T.BECKER,T.MIELKE,M.R.POOL,K.WILD,I.SINNING, R.BECKMANN | |
1X8W | FR3D | A | 242 | 95 | 3.8 | 11-09-04 | synthetic | STRUCTURE OF THE TETRAHYMENA RIBOZYME: BASE TRIPLE SANDWICH AND METAL ION AT THE ACTIVE SITE | F.GUO,A.R.GOODING,T.R.CECH | 1GRZ |
2RKJ | FR3D | CDGH | 968 | 318 | 4.5 | 1-08-08 | NEUROSPORA CRASSA,STAPHYLOCOCCUS PHAGE TWORT | COCRYSTAL STRUCTURE OF A TYROSYL-TRNA SYNTHETASE SPLICING FACTOR WITH A GROUP I INTRON RNA | P.J.PAUKSTELIS,J.-H.CHEN,E.CHASE,A.M.LAMBOWITZ,B.L.GOLDEN | |
1Y0Q | FR3D | AB | 233 | 89 | 3.6 | 12-21-04 | STAPHYLOCOCCUS PHAGE TWORT,synthetic | CRYSTAL STRUCTURE OF AN ACTIVE GROUP I RIBOZYME-PRODUCT COMPLEX | B.L.GOLDEN,H.KIM,E.CHASE | |
3DHS | FR3D | A | 215 | 80 | 3.6 | 1-27-09 | synthetic | MAPPING METAL-BINDING SITES IN THE CATALYTIC DOMAIN OF BACTERIAL RNASE P RNA | N.R.PACE,A.V.KAZANTSEV,A.A.KRIVENKO | |
1U6B | FR3D | BCD | 219 | 108 | 3.1 | 8-10-04 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS | P.L.ADAMS,M.R.STAHLEY,A.B.KOSEK,J.WANG,S.A.STROBEL | 1ZZN 3IIN 3BO4 3BO3 3BO2 |
2NOQ | FR3D | ABCDE | 317 | 115 | 7.3 | 11-21-06 | synthetic,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA | M.SCHULER,S.R.CONNELL,A.LESCOUTE,J.GIESEBRECHT,M.DABROWSKI, B.SCHROEER,T.MIELKE,P.A.PENCZEK,E.WESTHOF,C.M.T.SPAHN | |
3DIR | FR3D | A | 172 | 81 | 2.9 | 9-16-08 | synthetic | CRYSTALLIZATION OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO N6-1-IMINOETHYL-L-LYSINE | A.A.SERGANOV | 3DIS 3DIL 3DIZ 3DJ2 3DIM 3DIQ 3DIX 3DIO 3DIG 3DJ0 3DIY |
3P49 | FR3D | A | 169 | 48 | 3.5 | 4-06-11 | synthetic | CRYSTAL STRUCTURE OF A GLYCINE RIBOSWITCH FROM FUSOBACTERIUM NUCLEATUM | E.B.BUTLER,J.WANG,Y.XIONG,S.STROBEL | |
3D0U | FR3D | A | 161 | 76 | 2.8 | 7-01-08 | synthetic | CRYSTAL STRUCTURE OF LYSINE RIBOSWITCH BOUND TO LYSINE | A.D.GARST,A.HEROUX,R.P.RAMBO,R.T.BATEY | 3D0X |
2QBZ | FR3D | X | 153 | 73 | 2.6 | 9-18-07 | synthetic | STRUCTURE OF THE M-BOX RIBOSWITCH APTAMER DOMAIN | C.E.DANN III,W.C.WINKLER | 3PDR |
1GID | FR3D | AB | 316 | 153 | 2.5 | 12-31-96 | SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING | J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN,C.E.KUNDROT, T.R.CECH,J.A.DOUDNA | 1L8V 1HR2 2R8S |
1U9S | FR3D | A | 155 | 73 | 2.9 | 10-26-04 | synthetic | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P OF THE A-TYPE | A.S.KRASILNIKOV,Y.XIAO,T.PAN,A.MONDRAGON | |
1NBS | FR3D | AB | 270 | 114 | 3.1 | 2-18-03 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA | A.S.KRASILNIKOV,X.YANG,T.PAN,A.MONDRAGON | |
2NZ4 | FR3D | GHRS | 594 | 238 | 2.5 | 1-16-07 | synthetic,synthetic | STRUCTURAL INVESTIGATION OF THE GLMS RIBOZYME BOUND TO ITS CATALYTIC COFACTOR | J.C.COCHRANE | 3G9C 3L3C 3G8S 3G8T 3G96 |
3IZD | FR3D | A | 138 | 59 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF. | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
1LNG | FR3D | B | 97 | 44 | 2.3 | 6-07-02 | METHANOCALDOCOCCUS JANNASCHII | CRYSTAL STRUCTURE OF THE SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII | T.HAINZL,S.HUANG,A.E.SAUER-ERIKSSON | 2V3C 1Z43 3NDB |
3IVK | FR3D | C | 256 | 114 | 3.1 | 3-02-10 | synthetic | CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF AN RNA POLYMERASE RIBOZYME COMPLEXED WITH AN ANTIGEN BINDING ANTIBODY FRAGMENT | Y.KOLDOBSKAYA,E.M.DUGUID,D.M.SHECHNER,S.KOIDE, A.A.KOSSIAKOFF,D.P.BARTEL,J.A.PICCIRILLI | 3HHN |
2IL9 | FR3D | AM | 267 | 49 | 3.1 | 2-13-07 | synthetic | CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS | J.S.PFINGSTEN,D.A.COSTANTINO,J.S.KIEFT | |
1MFQ | FR3D | A | 127 | 53 | 3.1 | 9-20-02 | HOMO SAPIENS | CRYSTAL STRUCTURE ANALYSIS OF A TERNARY S-DOMAIN COMPLEX OF HUMAN SIGNAL RECOGNITION PARTICLE | A.KUGLSTATTER,C.OUBRIDGE,K.NAGAI | 2GO5 1RY1 1L9A 3KTV |
2HO7 | FR3D | AB | 141 | 64 | 2.9 | 9-26-06 | synthetic,synthetic | PRE-CLEAVAGE STATE OF THE THERMOANAEROBACTER TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSE-6-PHOSPHATE | D.J.KLEIN,A.R.FERRE-D'AMARE | 3B4A 2H0Z 2H0X 2GCV 2HO6 2GCS 3B4C 2Z74 2Z75 2H0S 3B4B 2H0W |
1C2X | FR3D | C | 120 | 35 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
3NPB | FR3D | A | 119 | 46 | 3.0 | 11-03-10 | BACILLUS SUBTILIS | TL5 RNA STRUCTURE | C.LU | |
3IZZ | FR3D | ABDE | 337 | 122 | 10.8 | 3-30-11 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | MODELS FOR RIBOSOME COMPONENTS THAT ARE NEAREST NEIGHBORS TO THE BOVINE MITOCHONDRIAL INITIATION FACTOR2 BOUND TO THE E. COLI RIBOSOME | A.S.YASSIN,E.HAQUE,P.P.DATTA,K.ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
1FOQ | FR3D | A | 545 | 200 | 20.0 | 12-22-00 | BACILLUS PHAGE PHI29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | A.A.SIMPSON,Y.TAO,P.G.LEIMAN,M.O.BADASSO,Y.HE,P.J.JARDINE, N.H.OLSON,M.C.MORAIS,S.GRIMES,D.L.ANDERSON,T.S.BAKER, M.G.ROSSMANN | |
3F4G | FR3D | XY | 109 | 51 | 3.0 | 1-27-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO RIBOFLAVIN. | A.A.SERGANOV,L.HUANG | 3F2Q 3F4H 3F2Y 3F2T 3F2W 3F4E 3F30 3F2X |
2XXA | FR3D | G | 204 | 80 | 3.9 | 3-02-11 | DEINOCOCCUS RADIODURANS | THE CRYSTAL STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE (SRP) IN COMPLEX WITH ITS RECEPTOR(SR) | S.F.ATAIDE,N.SCHMITZ,K.SHEN,A.KE,S.SHAN,J.A.DOUDNA,N.BAN | |
1YSH | FR3D | ABF | 162 | 65 | 9.5 | 7-05-05 | synthetic,synthetic,synthetic | LOCALIZATION AND DYNAMIC BEHAVIOR OF RIBOSOMAL PROTEIN L30E | M.HALIC,T.BECKER,J.FRANK,C.M.SPAHN,R.BECKMANN | |
3KTW | FR3D | C | 96 | 35 | 3.2 | 2-16-10 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE SRP19/S-DOMAIN SRP RNA COMPLEX OF SULFOLOBUS SOLFATARICUS | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
2PXV | FR3D | B | 49 | 22 | 2.0 | 8-07-07 | synthetic | VARIANT 6 OF RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT | 2XKV 2PXK 2PXD 2PXU 2PXQ 2PXF 2PXB 1DUL 2PXT 2PXP 3LQX 2PXE 2PXL 1HQ1 |
2OM7 | FR3D | ABCDFGHIJM | 455 | 151 | 7.3 | 1-15-08 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS | S.R.CONNELL,D.N.WILSON,M.ROST,M.SCHUELER,J.GIESEBRECHT, M.DABROWSKI,T.MIELKE,P.FUCINI,C.M.T.SPAHN | |
2GIS | FR3D | A | 94 | 44 | 2.9 | 7-04-06 | synthetic | STRUCTURE OF THE S-ADENOSYLMETHIONINE RIBOSWITCH MRNA REGULATORY ELEMENT | R.K.MONTANGE,R.T.BATEY | 3GX6 3GX3 3IQR 3GX2 3IQP 3GX7 3IQN 3GX5 |
3IWN | FR3D | A | 93 | 35 | 3.2 | 11-10-09 | synthetic | CO-CRYSTAL STRUCTURE OF A BACTERIAL C-DI-GMP RIBOSWITCH | N.KULSHINA,N.J.BAIRD,A.R.FERRE-D'AMARE | |
3ADD | FR3D | C | 176 | 73 | 2.4 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 3) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | 3ADB |
3CUL | FR3D | D | 182 | 67 | 2.8 | 6-24-08 | engineered,HOMO SAPIENS | AMINOACYL-TRNA SYNTHETASE RIBOZYME | H.XIAO,H.MURAKAMI,H.SUGA,A.R.FERRE-D'AMARE | 3CUN |
1M5O | FR3D | DE | 224 | 94 | 2.2 | 10-12-02 | synthetic,synthetic | TRANSITION STATE STABILIZATION BY A CATALYTIC RNA | P.B.RUPERT,A.P.MASSEY,S.T.SIGURDSSON,A.R.FERRE-D'AMARE | 1M5V 1M5P 1M5K |
3ADC | FR3D | C | 180 | 70 | 2.9 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 2) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | |
3MUR | FR3D | R | 91 | 38 | 3.0 | 8-25-10 | synthetic | CRYSTAL STRUCTURE OF THE C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI- GMP | S.A.STROBEL,K.D.SMITH | 3MXH 3MUM 3IRW 3MUV 3MUT |
1WZ2 | FR3D | D | 176 | 66 | 3.2 | 9-06-05 | synthetic | THE CRYSTAL STRUCTURE OF LEUCYL-TRNA SYNTHETASE AND TRNA(LEUCINE) COMPLEX | R.FUKUNAGA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1DUH | FR3D | A | 88 | 38 | 2.7 | 5-08-00 | synthetic | CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA | L.JOVINE,T.HAINZL,C.OUBRIDGE,W.G.SCOTT,J.LI,T.K.SIXMA, A.WONACOTT,T.SKARZYNSKI,K.NAGAI | |
3OWZ | FR3D | AB | 168 | 79 | 3.0 | 12-29-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN IRIDIUM | L.HUANG,A.SERGANOV,D.J.PATEL | 3OXB 3OXJ 3OXM 3OWI 3OWW 3OX0 3OXE 3OXD |
3A3A | FR3D | A | 86 | 34 | 3.1 | 8-11-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN SELENOCYSTINE TRNA | Y.ITOH,S.CHIBA,S.I.SEKINE,S.YOKOYAMA | 3HL2 |
2HOJ | FR3D | A | 74 | 33 | 2.5 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO THIAMINE PYROPHOSPHATE, MANGANESE IONS | T.E.EDWARDS,A.R.FERRE-D'AMARE | 3K0J 2HOO 2HOM 2HOL 2HOK 2HOP |
2ZZM | FR3D | B | 84 | 27 | 2.6 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNALEU | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
3AM1 | FR3D | B | 81 | 34 | 2.4 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF PROTEIN | Y.ARAISO,R.ISHITANI,O.NUREKI | |
2GDI | FR3D | XY | 156 | 74 | 2.0 | 7-04-06 | synthetic | CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE | A.SERGANOV | |
2BTE | FR3D | BE | 156 | 69 | 2.9 | 9-15-05 | THERMUS THERMOPHILUS | THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE | S.CUSACK,M.TUKALO,A.YAREMCHUK,R.FUKUNAGA,S.YOKOYAMA | 2V0G 2BYT |
3D2V | FR3D | A | 154 | 71 | 2.0 | 7-01-08 | ARABIDOPSIS THALIANA | STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE | S.THORE,C.FRICK,N.BAN | 2CKY 3D2X 3D2G |
1J2B | FR3D | CD | 148 | 40 | 3.3 | 5-27-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE COMPLEXED WITH LAMBDA-FORM TRNA(VAL) | R.ISHITANI,O.NUREKI,N.NAMEKI,N.OKADA,S.NISHIMURA,S.YOKOYAMA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1H3E | FR3D | B | 77 | 31 | 2.9 | 10-27-02 | THERMUS THERMOPHILUS | TYROSYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH WILD-TYPE TRNATYR(GUA) AND WITH ATP AND TYROSINOL | S.CUSACK,A.YAREMCHUK,I.KRIKLIVYI,M.TUKALO | |
3A2K | FR3D | C | 154 | 52 | 3.6 | 10-20-09 | synthetic | CRYSTAL STRUCTURE OF TILS COMPLEXED WITH TRNA | K.NAKANISHI,L.BONNEFOND,R.ISHITANI,O.NUREKI | |
1I9V | FR3D | A | 73 | 29 | 2.6 | 6-04-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX | N.E.MIKKELSEN,K.JOHANSSON,A.VIRTANEN,L.A.KIRSEBOM | 1ZO3 1EHZ 1ML5 1OB2 1MJ1 1FCW 1TN2 1ZO1 6TNA 4TNA 1EVV 1OB5 1SZ1 1TRA 1TTT 4TRA |
1EIY | FR3D | C | 76 | 27 | 3.3 | 3-06-00 | THERMUS THERMOPHILUS HB8 | THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE | Y.GOLDGUR,L.MOSYAK,L.RESHETNIKOVA,V.ANKILOVA,M.SAFRO | 2IY5 |
3IZY | FR3D | N | 76 | 4 | 10.8 | 3-23-11 | BOS TAURUS | MAMMALIAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 2 | A.S.YASSIN,E HAQUE,P.P DATTA,K ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
2NR0 | FR3D | E | 272 | 99 | 3.9 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
3DEG | FR3D | G | 298 | 113 | 10.0 | 8-19-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP | S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI, K.H.NIERHAUS,C.M.T.SPAHN | 2FMT 3CW5 3CW6 |
2CV1 | FR3D | D | 150 | 65 | 2.4 | 9-05-06 | synthetic | GLUTAMYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA(GLU), ATP, AND AN ANALOG OF L-GLUTAMATE: A QUATERNARY COMPLEX | S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2DXI 2CV2 1G59 1N77 1N78 2CV0 |
2ZUE | FR3D | B | 75 | 29 | 2.0 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII ARGINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(ARG) AND AN ATP ANALOG (ANP) | M.KONNO,T.SUMIDA,E.UCHIKAWA,Y.MORI,T.YANAGISAWA,S.SEKINE, S.YOKOYAMA | 2ZUF |
2CT8 | FR3D | D | 148 | 53 | 2.7 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS METHIONYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(MET) AND METHIONYL-ADENYLATE ANOLOGUE | K.NAKANISHI,Y.OGISO,T.NAKAMA,S.FUKAI,O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2CSX |
2AKE | FR3D | B | 72 | 21 | 3.1 | 7-11-06 | BOS TAURUS | STRUCTURE OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE IN COMPLEX WITH TRNA(TRP) | N.SHEN,L.GUO,B.YANG,Y.JIN,J.DING | 2DR2 |
1QU2 | FR3D | T | 75 | 31 | 2.2 | 8-31-99 | STAPHYLOCOCCUS AUREUS | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | L.F.SILVIAN,J.WANG,T.A.STEITZ | 1QU3 1FFY |
1GAX | FR3D | D | 150 | 60 | 2.9 | 12-06-00 | synthetic | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE | S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,J.TAO,D.G.VASSYLYEV, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 1IVS |
1O0C | FR3D | B | 74 | 31 | 2.7 | 4-15-03 | synthetic | CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | T.L.BULLOCK,J.J.PERONA | 1QRS 1GTS 2RE8 1ZJW 1QRT 1EXD 1EUQ 1EUY 1QTQ 1QRU 1GTR 1O0B 2RD2 |
1VBY | FR3D | B | 73 | 30 | 2.9 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE HEPATITIS DELTA VIRUS GEMONIC RIBOZYME PRECURSOR, WITH C75U MUTAION, AND MN2+ BOUND | A.KE,K.ZHOU,F.DING,J.H.D.CATE,J.A.DOUDNA | 1SJ4 1SJ3 1VC7 1VC6 1VC5 1VBX 1VC0 1SJF 1DRZ 2OIH 1VBZ 2OJ3 1CX0 |
1J1U | FR3D | B | 74 | 31 | 2.0 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEAL TYROSYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(TYR) AND L-TYROSINE | T.KOBAYASHI,O.NUREKI,R.ISHITANI,M.TUKALO,S.CUSACK, K.SAKAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3FOZ | FR3D | C | 143 | 58 | 2.5 | 1-20-09 | synthetic,synthetic | STRUCTURE OF E. COLI ISOPENTENYL-TRNA TRANSFERASE IN COMPLEX WITH E. COLI TRNA(PHE) | E.SEIF,B.M.HALLBERG | 2ZM5 2ZXU |
2DER | FR3D | D | 145 | 55 | 3.1 | 8-15-06 | synthetic | COCRYSTAL STRUCTURE OF AN RNA SULFURATION ENZYME MNMA AND TRNA-GLU IN THE INITIAL TRNA BINDING STATE | T.NUMATA,Y.IKEUCHI,S.FUKAI,T.SUZUKI,O.NUREKI | 2DEU 2DET |
3AL0 | FR3D | E | 74 | 30 | 3.4 | 9-29-10 | synthetic | CRYSTAL STRUCTURE OF THE GLUTAMINE TRANSAMIDOSOME FROM THERMOTOGA MARITIMA IN THE GLUTAMYLATION STATE. | T.ITO,S.YOKOYAMA | 3AKZ |
1U0B | FR3D | A | 74 | 30 | 2.3 | 11-23-04 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF CYSTEINYL-TRNA SYNTHETASE BINARY COMPLEX WITH TRNACYS | S.HAUENSTEIN,C.M.ZHANG,Y.M.HOU,J.J.PERONA | |
2D6F | FR3D | F | 146 | 50 | 3.1 | 7-11-06 | synthetic | CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN) | O.NUREKI | |
3L0U | FR3D | A | 73 | 30 | 3.0 | 3-16-10 | synthetic | THE CRYSTAL STRUCTURE OF UNMODIFIED TRNAPHE FROM ESCHERICHIA COLI | R.T.BYRNE,A.L.KONEVEGA,M.V.RODNINA,A.A.ANTSON | |
2AZX | FR3D | C | 144 | 60 | 2.8 | 8-01-06 | synthetic | CHARGED AND UNCHARGED TRNAS ADOPT DISTINCT CONFORMATIONS WHEN COMPLEXED WITH HUMAN TRYPTOPHANYL-TRNA SYNTHETASE | X.L.YANG,F.J.OTERO,K.L.EWALT,J.LIU,M.A.SWAIRJO,C.KOHRER, U.L.RAJBHANDARY,R.J.SKENE,D.E.MCREE,P.SCHIMMEL | |
2ZNI | FR3D | C | 144 | 52 | 3.1 | 12-30-08 | synthetic | CRYSTAL STRUCTURE OF PYRROLYSYL-TRNA SYNTHETASE-TRNA(PYL) COMPLEX FROM DESULFITOBACTERIUM HAFNIENSE | K.NOZAWA,Y.ARAISO,D.SOLL,R.ISHITANI,O.NUREKI | |
1Y26 | FR3D | X | 71 | 35 | 2.1 | 12-28-04 | VIBRIO VULNIFICUS | A-RIBOSWITCH-ADENINE COMPLEX | A.SERGANOV,Y.R.YUAN,D.J.PATEL | |
2DU3 | FR3D | D | 71 | 26 | 2.6 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE COMPLEXED WITH TRNACYS AND O-PHOSPHOSERINE | R.FUKUNAGA | 2DU4 2DU5 2DU6 |
3KFU | FR3D | K | 278 | 110 | 3.0 | 8-25-10 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF THE TRANSAMIDOSOME | M.BLAISE,M.BAILLY,M.FRECHIN,S.THIRUP,H.D.BECKER,D.KERN | |
2ZZN | FR3D | C | 142 | 58 | 3.0 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNACYS | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
2OIU | FR3D | PQ | 142 | 62 | 2.6 | 3-13-07 | synthetic | L1 RIBOZYME LIGASE CIRCULAR ADDUCT | M.P ROBERTSON,W.G.SCOTT | |
3LA5 | FR3D | A | 71 | 35 | 1.7 | 1-26-10 | BACILLUS SUBTILIS | X-RAY CRYSTAL STRUCTURE OF MC6 RNA RIBOSWITCH BOUND TO AZACYTOSINE | M.S.DUNSTAN,D.LEYS | |
1KXK | FR3D | A | 70 | 28 | 3.0 | 3-22-02 | synthetic | CRYSTAL STRUCTURE OF A RNA MOLECULE CONTAINING DOMAIN 5 AND 6 OF THE YEAST AI5G GROUP II SELF-SPLICING INTRON | L.ZHANG,J.A.DOUDNA | |
3IVN | FR3D | A | 138 | 60 | 2.8 | 1-19-10 | BACILLUS SUBTILIS | STRUCTURE OF THE U65C MUTANT A-RIBOSWITCH APTAMER FROM THE BACILLUS SUBTILIS PBUE OPERON | V.DELFOSSE,P.DAGENAIS,D.CHAUSSE,G.DI TOMASSO,P.LEGAULT | |
3EPH | FR3D | E | 138 | 48 | 3.0 | 11-04-08 | synthetic | CRYSTALLOGRAPHIC SNAPSHOTS OF EUKARYOTIC DIMETHYLALLYLTRANSFERASE ACTING ON TRNA: INSIGHT INTO TRNA RECOGNITION AND REACTION MECHANISM | R.H.HUANG,C.ZHOU | 3EPJ 3EPL 3EPK |
1QF6 | FR3D | B | 69 | 29 | 2.9 | 5-06-99 | ESCHERICHIA COLI | STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA | R.SANKARANARAYANAN,A.C.DOCK-BREGEON,B.REES,D.MORAS | |
3MOJ | FR3D | A | 69 | 26 | 2.9 | 8-04-10 | ESCHERICHIA COLI | STRUCTURE OF THE RNA BINDING DOMAIN OF THE BACILLUS SUBTILIS YXIN PROTEIN COMPLEXED WITH A FRAGMENT OF 23S RIBOSOMAL RNA | J.W.HARDIN,Y.HU,D.B.MCKAY | |
1GIX | FR3D | 1BC | 198 | 71 | 5.5 | 5-04-01 | THERMUS THERMOPHILUS,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIX, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY | M.M.YUSUPOV,G.Z.YUSUPOVA,A.BAUCOM,K.LIEBERMAN,T.N.EARNEST, J.H.D.CATE,H.F.NOLLER | 1JGQ 1JGO 1JGP |
1EFW | FR3D | C | 126 | 50 | 3.0 | 6-19-00 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF ASPARTYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED TO TRNAASP FROM ESCHERICHIA COLI | C.BRIAND,A.POTERSZMAN,S.EILER,G.WEBSTER,J.-C.THIERRY,D.MORAS | 1C0A |
2QUW | FR3D | AB | 67 | 25 | 2.2 | 7-15-08 | synthetic,synthetic | HAMMERHEAD RIBOZYME G12A MUTANT AFTER CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | 2QUS |
3HAX | FR3D | EF | 71 | 31 | 2.1 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND GAR1-MINUS H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | 3HAY |
1IL2 | FR3D | C | 129 | 56 | 2.6 | 9-28-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE:YEAST TRNAASP:ASPARTYL-ADENYLATE COMPLEX | L.MOULINIER,S.EILER,G.ERIANI,J.GANGLOFF,J.C.THIERRY, K.GABRIEL,W.H.MCCLAIN,D.MORAS | 1ASZ 1ASY |
3FO4 | FR3D | A | 63 | 32 | 1.9 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-CHLOROGUANINE | S.D.GILBERT,R.T.BATEY | 2EES 2EEW 3FO6 2XNZ 1Y27 3DS7 2EET 3G4M 3GAO 2G9C 2B57 3GOT 3GES 2EEU 3GOG 1U8D 2EEV 3GER |
3BBV | FR3D | z | 67 | 21 | 10.0 | 10-21-08 | THERMUS THERMOPHILUS | THE TRNA(PHE) FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX | L.JIANG,J.P.ABRAHAMS | |
1B23 | FR3D | R | 66 | 23 | 2.6 | 12-07-98 | ESCHERICHIA COLI | E. COLI CYSTEINYL-TRNA AND T. AQUATICUS ELONGATION FACTOR EF-TU:GTP TERNARY COMPLEX | P.NISSEN,M.KJELDGAARD,S.THIRUP,J.NYBORG | |
3R4F | FR3D | A | 66 | 23 | 3.5 | 4-20-11 | synthetic | PROHEAD RNA | F.DING,C.LU,W.ZHANO,K.R.RAJASHANKAR,D.L.ANDERSON,P.J.JARDINE, S.GRIMES,A.KE | |
2TRA | FR3D | A | 65 | 28 | 3.0 | 11-06-87 | SACCHAROMYCES CEREVISIAE | RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS | E.WESTHOF,P.DUMAS,D.MORAS | 3TRA |
1H4S | FR3D | T | 65 | 26 | 2.9 | 6-18-01 | THERMUS THERMOPHILUS | PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE | A.YAREMCHUK,M.TUKALO,S.CUSACK | 1H4Q |
2NQP | FR3D | F | 65 | 21 | 3.5 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
486D | FR3D | CD | 195 | 79 | 7.5 | 10-04-99 | THERMUS THERMOPHILUS,ESCHERICHIA COLI,SACCHAROMYCES CEREVISIAE,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,synthetic,synthetic | X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES | J.H.CATE,M.M.YUSUPOV,G.ZH.YUSUPOVA,T.N.EARNEST,H.F.NOLLER | |
3NKB | FR3D | AB | 70 | 31 | 1.9 | 9-01-10 | HOMO SAPIENS | A 1.9A CRYSTAL STRUCTURE OF THE HDV RIBOZYME PRECLEAVAGE SUGGESTS BOTH LEWIS ACID AND GENERAL ACID MECHANISMS CONTRIBUTE TO PHOSPHODIESTER CLEAVAGE | J.-H.CHEN,R.YAJIMA,D.M.CHADALAVADA,E.CHASE,P.C.BEVILACQUA,B.L.GOLDEN | |
3EGZ | FR3D | B | 64 | 20 | 2.2 | 10-28-08 | synthetic | CRYSTAL STRUCTURE OF AN IN VITRO EVOLVED TETRACYCLINE APTAMER AND ARTIFICIAL RIBOSWITCH | H.XIAO,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1YFG | FR3D | A | 64 | 23 | 3.0 | 9-03-97 | SACCHAROMYCES CEREVISIAE | YEAST INITIATOR TRNA | R.BASAVAPPA,P.B.SIGLER | |
2WWA | FR3D | DEFG | 140 | 45 | 8.9 | 12-08-09 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | CRYO-EM STRUCTURES OF IDLE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | 2WW9 |
1F7V | FR3D | B | 60 | 22 | 2.9 | 6-27-01 | synthetic | CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG | B.DELAGOUTTE,D.MORAS,J.CAVARELLI | 1F7U |
2WWB | FR3D | DEFG | 136 | 47 | 6.5 | 12-08-09 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | |
3ICQ | FR3D | E | 122 | 38 | 3.2 | 8-25-09 | synthetic | KARYOPHERIN NUCLEAR STATE | A.G.COOK,N.FUKUHARA,M.JINEK,E.CONTI | |
1FIR | FR3D | A | 61 | 22 | 3.3 | 1-17-01 | BOS TAURUS | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3) | P.BENAS,P.DUMAS | |
1UN6 | FR3D | F | 122 | 50 | 3.1 | 11-20-03 | XENOPUS LAEVIS | THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION | D.LU,M.A.SEARLES,A.KLUG | |
1SER | FR3D | T | 61 | 25 | 2.9 | 4-30-94 | THERMUS THERMOPHILUS | THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER | S.BIOU,V.CUSACK,A.YAREMCHUK,M.TUKALO | |
2CZJ | FR3D | D | 240 | 69 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TMRNA FROM THERMUS THERMOPHILUS HB8 | Y.BESSHO,R.SHIBATA,S.SEKINE,K.MURAYAMA,M.SHIROUZU, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3HJW | FR3D | DE | 70 | 30 | 2.4 | 6-23-09 | synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | 3LWR 3LWV 3LWQ 3LWP 3LWO |
1QA6 | FR3D | C | 116 | 54 | 2.8 | 5-25-99 | synthetic | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | G.L.CONN,D.E.DRAPER,E.E.LATTMAN,A.G.GITTIS | 1C04 1Y39 1HC8 |
1MMS | FR3D | C | 116 | 52 | 2.6 | 4-17-00 | synthetic | CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX | B.T.WIMBERLY,R.GUYMON,J.P.MCCUTCHEON,S.W.WHITE, V.RAMAKRISHNAN | 2JQ7 1OLN |
1F7Y | FR3D | B | 57 | 24 | 2.8 | 11-22-00 | synthetic | THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | E.ENNIFAR,A.NIKOULINE,A.SERGANOV,S.TISHCHENKO,N.NEVSKAYA, M.GARBER,B.EHRESMANN,C.EHRESMANN,S.NIKONOV,P.DUMAS | 1DK1 1KUQ |
2HVY | FR3D | E | 57 | 20 | 2.3 | 9-12-06 | synthetic | CRYSTAL STRUCTURE OF AN H/ACA BOX RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2DLC | FR3D | Y | 57 | 20 | 2.4 | 6-12-07 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF YEAST TYROSYL- TRNA SYNTHETASE | M.TSUNODA,Y.KUSAKABE,N.TANAKA,K.T.NAKAMURA | |
2NRE | FR3D | F | 56 | 18 | 4.0 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
1MZP | FR3D | B | 55 | 25 | 2.6 | 1-21-03 | synthetic | STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME | A.NIKULIN,I.ELISEIKINA,S.TISHCHENKO,N.NEVSKAYA,N.DAVYDOVA, O.PLATONOVA,W.PIENDL,M.SELMER,A.LILJAS,R.ZIMMERMANN, M.GARBER,S.NIKONOV | |
2FK6 | FR3D | R | 53 | 20 | 2.9 | 3-21-06 | synthetic | CRYSTAL STRUCTURE OF RNASE Z/TRNA(THR) COMPLEX | I.LI DE LA SIERRA-GALLAY,N.MATHY,O.PELLEGRINI,C.CONDON | |
3E5C | FR3D | A | 52 | 21 | 2.3 | 10-07-08 | synthetic | CRYSTAL STRUCTURE OF THE SMK BOX (SAM-III) RIBOSWITCH WITH SAM | C.LU | 3E5E 3E5F |
2QWY | FR3D | AB | 156 | 62 | 2.8 | 1-22-08 | synthetic | SAM-II RIBOSWITCH BOUND TO S-ADENOSYLMETHIONINE | S.D.GILBERT,R.P.RAMBO,D.VAN TYNE,R.T.BATEY | |
3NPN | FR3D | A | 50 | 18 | 2.8 | 10-06-10 | RALSTONIA SOLANACEARUM | STRUCTURE OF THE S-ADENOSYLHOMOCYSTEINE RIBOSWITCH AT 3.0A | F.E.REYES,A.E.EDWARDS,R.T.BATEY | 3NPQ |
1E8O | FR3D | E | 49 | 18 | 3.2 | 11-08-00 | HOMO SAPIENS | CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP | O.WEICHENRIEDER,K.WILD,K.STRUB,S.CUSACK | |
1U63 | FR3D | B | 98 | 40 | 3.4 | 4-12-05 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX | N.NEVSKAYA,S.TISHCHENKO,A.GABDOULKHAKOV,E.NIKONOVA, O.NIKONOV,A.NIKULIN,M.GARBER,S.NIKONOV,W.PIENDL | |
2VPL | FR3D | B | 94 | 38 | 2.3 | 9-23-08 | METHANOCALDOCOCCUS JANNASCHII | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | V.KLJASHTORNY,S.TISHCHENKO,N.NEVSKAYA,S.NIKONOV,M.GARBER | |
1S03 | FR3D | B | 94 | 42 | 2.7 | 5-25-04 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX | H.J.MERIANOS,J.WANG,P.B.MOORE | |
3CIY | FR3D | CD | 92 | 46 | 3.4 | 5-06-08 | synthetic,MUS MUSCULUS | MOUSE TOLL-LIKE RECEPTOR 3 ECTODOMAIN COMPLEXED WITH DOUBLE- STRANDED RNA | L.LIU,I.BOTOS,Y.WANG,J.N.LEONARD,J.SHILOACH,D.M.SEGAL, D.R.DAVIES | |
1XJR | FR3D | A | 46 | 20 | 2.7 | 2-01-05 | synthetic | THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME | M.P.ROBERTSON,H.IGEL,R.BAERTSCH,D.HAUSSLER,M.ARES JR., W.G.SCOTT | |
3IAB | FR3D | R | 46 | 13 | 2.7 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF RNASE P /RNASE MRP PROTEINS POP6, POP7 IN A COMPLEX WITH THE P3 DOMAIN OF RNASE MRP RNA | A.PEREDERINA,O.A.ESAKOVA,C.QUAN,E.KHANOVA,A.S.KRASILNIKOV | |
2EZ6 | FR3D | CD | 56 | 26 | 2.0 | 2-07-06 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS RNASE III (D44N) COMPLEXED WITH PRODUCT OF DOUBLE-STRANDED RNA PROCESSING | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | 2NUF 2NUE |
1P6V | FR3D | B | 69 | 17 | 3.2 | 8-12-03 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TRANSFER-MESSENGER RNA IN COMPLEX WITH SMPB | S.GUTMANN,P.W.HAEBEL,L.METZINGER,M.SUTTER,B.FELDEN,N.BAN | |
1QZW | FR3D | B | 180 | 44 | 4.1 | 11-18-03 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION | K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING | |
1G1X | FR3D | DE | 84 | 32 | 2.6 | 10-30-00 | synthetic,synthetic | STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA | S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT,J.R.WILLIAMSON | |
2OEU | FR3D | AB | 59 | 24 | 2.0 | 2-20-07 | synthetic,synthetic | FULL-LENGTH HAMMERHEAD RIBOZYME WITH MN(II) BOUND | M.MARTICK,W.G.SCOTT | 2GOZ |
3BNT | FR3D | A | 42 | 18 | 2.3 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF [CO(NH3)6]CL3 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | |
1KH6 | FR3D | A | 42 | 16 | 2.9 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF AN RNA TERTIARY DOMAIN ESSENTIAL TO HCV IRES-MEDIATED TRANSLATION INITIATION. | J.S.KIEFT,K.ZHOU,A.GRECH,R JUBIN,J.A.DOUDNA | |
3P22 | FR3D | EFGH | 190 | 104 | 2.5 | 12-08-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, IN COMPLEX WITH A9 RNA | R.M.MITTON-FRY,S.J.DEGREGORIO,J.WANG,T.A.STEITZ,J.A.STEITZ | |
1YKV | FR3D | CD | 98 | 42 | 3.3 | 2-22-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE | A.SERGANOV,S.KEIPER,L.MALININA,V.TERESHKO,E.SKRIPKIN, C.HOBARTNER,A.POLONSKAIA,A.T.PHAN,R.WOMBACHER,R.MICURA, Z.DAUTER,A.JASCHKE,D.J.PATEL | 1YLS 1YKQ |
2HW8 | FR3D | B | 36 | 17 | 2.1 | 12-19-06 | synthetic | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | S.TISHCHENKO,E.NIKONOVA,A.NIKULIN,N.NEVSKAYA,S.VOLCHKOV, W.PIENDL,M.GARBER,S.NIKONOV | 1ZHO |
2ZY6 | FR3D | A | 38 | 12 | 1.8 | 6-30-09 | synthetic | CRYSTAL STRUCTURE OF A TRUNCATED TRNA, TPHE39A | I.TANAKA,M.YAO,Y.TANAKA,Y.KITAGO,S.YMAGATA | |
1KOG | FR3D | J | 296 | 132 | 3.5 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE INTERACTING WITH THE ESSENTIAL DOMAIN OF ITS MRNA OPERATOR | A.TORRES-LARRIOS,A.C.DOCK-BREGEON,P.ROMBY,B.REES, R.SANKARANARAYANAN,J.CAILLET,M.SPRINGER,C.EHRESMANN, B.EHRESMANN,D.MORAS | |
1I6U | FR3D | D | 74 | 37 | 2.6 | 8-03-01 | synthetic | RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | S.TISHCHENKO,A.NIKULIN,N.FOMENKOVA,N.NEVSKAYA,O.NIKONOV, P.DUMAS,H.MOINE,B.EHRESMANN,C.EHRESMANN,W.PIENDL,V.LAMZIN, M.GARBER,S.NIKONOV | |
2P7E | FR3D | ABCDP | 60 | 28 | 2.0 | 5-22-07 | synthetic,synthetic,synthetic,synthetic | VANADATE AT THE ACTIVE SITE OF A SMALL RIBOZYME SUGGESTS A ROLE FOR WATER IN TRANSITION-STATE STABILIZATION | A.T.TORELLI,J.KRUCINSKA,J.E.WEDEKIND | 1ZFX 3GS1 2OUE 3GS5 2FGP 2P7F 2NPY 2BCY 1ZFV 3GS8 2P7D 2D2L 1X9K 2D2K 1X9C 2NPZ 2BCZ 1ZFT |
1KFO | FR3D | A | 36 | 16 | 1.6 | 12-07-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC- FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | S.LIMA,J.HILDENBRAND,A.KOROSTELEV,S.HATTMAN,H.LI | |
2DR8 | FR3D | B | 33 | 13 | 2.5 | 11-14-06 | synthetic | COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH TRNAMINIDC AND CTP | K.TOMITA,R.ISHITANI,S.FUKAI,O.NUREKI | 2DRB 2ZH3 2ZH1 2ZH7 2ZH2 2DR7 2ZH6 2ZH5 2DR5 2ZHA 2DVI 2DR9 2ZH4 2ZHB 2ZH9 2ZH8 2DRA |
2XDB | FR3D | G | 35 | 12 | 2.5 | 1-12-11 | PECTOBACTERIUM ATROSEPTICUM | A PROCESSED NON-CODING RNA REGULATES A BACTERIAL ANTIVIRAL SYSTEM | T.R.BLOWER,X.Y.PEI,F.L.SHORT,P.C.FINERAN,D.P.HUMPHREYS,B.F.LUISI, G.P.C.SALMOND | 2XDD 2XD0 |
3OVA | FR3D | C | 34 | 13 | 2.0 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE IN POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | 3OV7 3OUY 3OVB 3OVS |
1ET4 | FR3D | AB | 175 | 75 | 2.3 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A | D.SUSSMAN,C.WILSON | 1DDY |
3PLA | FR3D | GHIJ | 87 | 35 | 3.1 | 1-26-11 | synthetic,synthetic | CRYSTAL STRUCTURE OF A CATALYTICALLY ACTIVE SUBSTRATE-BOUND BOX C/D RNP FROM SULFOLOBUS SOLFATARICUS | J.LIN,S.LAI,R.JIA,A.XU,L.ZHANG,J.LU,K.YE | |
1HMH | FR3D | AC | 102 | 30 | 2.6 | 12-07-95 | engineered | THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME | H.W.PLEY,K.M.FLAHERTY,D.B.MCKAY | |
1VFG | FR3D | D | 65 | 16 | 2.8 | 8-10-04 | synthetic | CRYSTAL STRUCTURE OF TRNA NUCLEOTIDYLTRANSFERASE COMPLEXED WITH A PRIMER TRNA AND AN INCOMING ATP ANALOG | K.TOMITA,S.FUKAI,R.ISHITANI,T.UEDA,N.TAKEUCHI,D.G.VASSYLYEV, O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1MJI | FR3D | C | 68 | 28 | 2.5 | 1-21-03 | ESCHERICHIA COLI | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | A.PEREDERINA,N.NEVSKAYA,O.NIKONOV,A.NIKULIN,P.DUMAS,M.YAO, I.TANAKA,M.GARBER,G.GONGADZE,S.NIKONOV | |
1E7K | FR3D | D | 34 | 14 | 2.9 | 2-19-01 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL 15.5KD PROTEIN BOUND TO A U4 SNRNA FRAGMENT | I.VIDOVIC,S.NOTTROTT,K.HARTHMUTH,R.LUHRMANN,R.FICNER | 2OZB |
1F1T | FR3D | A | 33 | 14 | 2.8 | 9-04-00 | synthetic | CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | C.BAUGH,D.GRATE,C.WILSON | |
3GCA | FR3D | A | 33 | 15 | 2.8 | 3-03-09 | synthetic | THE STRUCTURAL BASIS FOR RECOGNITION OF THE PREQ0 METABOLITE BY AN UNUSUALLY SMALL RIBOSWITCH APTAMER DOMAIN | R.C.SPITALE,J.E.WEDEKIND | |
3BO0 | FR3D | DEFG | 105 | 32 | 9.6 | 12-09-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | RIBOSOME-SECY COMPLEX | C.W.AKEY,J.F.MENETRET | 3BO1 |
3CZW | FR3D | X | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M |
3ID5 | FR3D | D | 64 | 16 | 4.0 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS C/D RNP ASSEMBLED WITH NOP5, FIBRILLARIN, L7AE AND A SPLIT HALF C/D RNA | K.YE | |
3DKN | FR3D | DEF | 69 | 30 | 8.7 | 8-19-08 | CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS | SEC61 IN THE CANINE RIBOSOME-CHANNEL COMPLEX FROM THE ENDOPLASMIC RETICULUM | J.-F.MENETRET,C.AKEY | |
1JBR | FR3D | CF | 61 | 26 | 2.1 | 10-26-01 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31- MER SRD RNA INHIBITOR | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | 1JBS 1JBT |
3FU2 | FR3D | A | 93 | 48 | 2.9 | 3-03-09 | synthetic | COCRYSTAL STRUCTURE OF A CLASS-I PREQ1 RIBOSWITCH | D.J.KLEIN,T.E.EDWARDS,A.R.FERRE-D'AMARE | 2L1V 3K1V |
364D | FR3D | ABC | 59 | 24 | 3.0 | 1-02-98 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | .0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | 357D |
1HVU | FR3D | C | 120 | 36 | 4.8 | 1-13-99 | synthetic | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT | J.JAEGER,T.RESTLE,T.A.STEITZ | |
2IPY | FR3D | D | 60 | 24 | 2.8 | 1-09-07 | synthetic | CRYSTAL STRUCTURE OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH FERRITIN H IRE-RNA | W.E.WALDEN,A.I.SELEZNEVA,J.DUPUY,A.VOLBEDA,J.C.FONTECILLA- CAMPS,E.C.THEIL,K.VOLZ | |
2BH2 | FR3D | C | 58 | 10 | 2.1 | 3-30-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE RUMA IN COMPLEX WITH RIBOSOMAL RNA SUBSTRATE AND S-ADENOSYLHOMOCYSTEINE. | T.T.LEE,S.AGARWALLA,R.M.STROUD | |
3B91 | FR3D | ABC | 60 | 29 | 2.8 | 8-12-08 | synthetic,synthetic,synthetic | MINIMALLY HINGED HAIRPIN RIBOZYME INCORPORATES ADE38(2AP) AND 2',5'-PHOSPHODIESTER LINKAGE MUTATIONS AT THE ACTIVE SITE | C.MACELREVEY,J.KRUCINSKA,J.E.WEDEKIND | 3B5S 3BBI 3B5F 3CQS 3B5A 3CR1 3I2S 3B58 3I2R 3BBK 3I2Q 3BBM 3I2U |
3B31 | FR3D | AB | 43 | 16 | 2.4 | 12-25-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN III OF THE CRICKET PARALYSIS VIRUS IRES RNA | J.S.KIEFT,D.A.COSTANTINO,J.S.PFINGSTEN,R.P.RAMBO | 3MJA 3MJ3 3MJB |
1OOA | FR3D | D | 58 | 18 | 2.5 | 7-22-03 | synthetic | CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH- AFFINITY RNA APTAMER | D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III, G.GHOSH | |
1Q96 | FR3D | AC | 81 | 37 | 1.8 | 11-25-03 | synthetic | CRYSTAL STRUCTURE OF A MUTANT OF THE SARCIN/RICIN DOMAIN FROM RAT 28S RRNA | C.C.CORRELL,J.BENEKEN,M.J.PLANTINGA,M.LUBBERS,Y.L.CHAN | 1Q93 430D |
3O7V | FR3D | A | 26 | 12 | 2.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END | Y.TIAN,D.K.SIMANSHU,J.-B.MA,D.J.PATEL | 3O3I 3O6E |
1D4R | FR3D | AB | 54 | 22 | 2.0 | 12-02-99 | synthetic,synthetic | -MER FRAGMENT OF HUMAN SRP RNA HELIX 6 | K.WILD,O.WEICHENRIEDER,G.A.LEONARD,S.CUSACK | |
2X7N | FR3D | A | 27 | 12 | 11.8 | 3-31-10 | SACCHAROMYCES CEREVISIAE | MECHANISM OF EIF6S ANTI-ASSOCIATION ACTIVITY | M.GARTMANN,M.BLAU,J.-P.ARMACHE,T.MIELKE,M.TOPF,R.BECKMANN | |
3DVZ | FR3D | A | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 483D 3DW7 1Q9A 480D 3DW6 3DW4 3DW5 1MSY |
1L2X | FR3D | A | 27 | 14 | 1.3 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D |
2B63 | FR3D | R | 27 | 6 | 3.8 | 12-06-05 | synthetic | COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX | H.KETTENBERGER,A.EISENFUEHR,F.BRUECKNER,M.THEIS,M.FAMULOK, P.CRAMER | |
1XOK | FR3D | AB | 36 | 13 | 3.0 | 1-04-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF ALFALFA MOSAIC VIRUS RNA 3'UTR IN COMPLEX WITH COAT PROTEIN N TERMINAL PEPTIDE | L.M.GUOGAS,D.J.FILMAN,J.M.HOGLE,L.GEHRKE | |
1JID | FR3D | B | 26 | 10 | 1.8 | 10-19-01 | synthetic | HUMAN SRP19 IN COMPLEX WITH HELIX 6 OF HUMAN SRP RNA | K.WILD,I.SINNING,S.CUSACK | 1L1W |
387D | FR3D | A | 26 | 5 | 3.1 | 8-26-03 | synthetic | RNA PSEUDOKNOT WITH 3D DOMAIN SWAPPING | S.E.LIETZKE,C.E.KUNDROT,C.L.BARNES | |
413D | FR3D | A | 26 | 12 | 1.8 | 7-10-98 | synthetic | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | Y.TANAKA,S.FUJII,H.HIROAKI,T.SAKATA,T.TANAKA,S.UESUGI,K.- I.TOMITA,Y.KYOGOKU | |
2RFK | FR3D | DEF | 61 | 24 | 2.9 | 2-05-08 | PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS | SUBSTRATE RNA POSITIONING IN THE ARCHAEAL H/ACA RIBONUCLEOPROTEIN COMPLEX | B.LIANG,S.XUE,R.M.TERNS,M.P.TERNS,H.LI,SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) | 3HJY |
2A43 | FR3D | A | 26 | 13 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
2F8T | FR3D | CD | 50 | 24 | 3.1 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
488D | FR3D | ABCD | 65 | 33 | 3.1 | 3-06-00 | synthetic,synthetic,synthetic,synthetic | CATALYTIC RNA ENZYME-PRODUCT COMPLEX | J.B.MURRAY,H.SZOKE,A.SZOKE,W.G.SCOTT | 379D 299D 1MME 1NYI 301D 359D 1Q29 300D |
2QUX | FR3D | F | 150 | 54 | 2.4 | 12-18-07 | PSEUDOMONAS PHAGE PP7 | PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN | J.A.CHAO | |
283D | FR3D | A | 24 | 12 | 2.3 | 9-30-96 | engineered | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | K.J.BAEYENS,H.L.DE BONDT,A.PARDI,S.R.HOLBROOK | |
3MIJ | FR3D | A | 24 | 12 | 2.6 | 2-16-11 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA G-QUADRUPLEX COMPLEXED WITH AN ACRIDINE-BASED LIGAND. | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
2Q1R | FR3D | A | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | 3OG8 1KD4 2NUG 1YZD 2E2I 2QKB 3CGS 3HOW 17RA 1ZBL 2DD1 3GTJ 1DI2 404D 1YYW 1Z7F 3BSU 3CGP 2NVQ 1Z79 2JA8 2E2H 1OO7 2YU9 405D 1F5G 2JXQ 1JB8 2KXZ 1RC7 1A34 3HOY 3GTM 3GTL 2DD2 1EFO 2Q1O 2JA7 1CX5 3HOU 2VUM 2KY0 3HOV 2NVT 353D 1RRR 2R7Z 1YZ9 2H1M 2QK9 3HOZ 2KP4 1KD3 3I4N 1R9S 1SFO 1Y1W 3CGR 397D 2JA6 1YYO 1KD5 205D 2R92 1F5H 420D 1YY0 3HOX 1YYK 3GTP 1RRD 157D 2QKK 1G4Q 2KY1 1FIX 3ADL 2NVZ 3I4M 1AC3 219D 1R9T 2DD3 3GTQ 2NVX 3GTG 2G92 1RNA 3CGQ 2KP3 3NCU 280D 3M4O 1AL5 3GTO 1DRR 1XV0 3M3Y 1Y77 3LRN 2JXS 2JA5 1ZBI |
1A9N | FR3D | Q | 48 | 12 | 2.4 | 9-23-98 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA | S.R.PRICE,P.R.EVANS,K.NAGAI | |
2NOK | FR3D | ABCD | 88 | 35 | 3.0 | 2-13-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DOMAIN FROM HEPATITIS C VIRUS. | S.M.DIBROV,H.JOHNSTON-COS,Y.H.WENG | 3P59 2PN3 2PN4 |
255D | FR3D | A | 24 | 12 | 2.0 | 2-07-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | S.R.HOLBROOK,C.CHEONG,I.TINOCO JR,S.-H.KIM | |
2ANN | FR3D | B | 23 | 6 | 2.3 | 10-24-06 | synthetic | CRYSTAL STRUCTURE (I) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH 25 NT RNA HAIRPIN | L.MALININA,M.TEPLOVA,K.MUSUNURU,A.TEPLOV,J.C.DARNELL, S.K.BURLEY,R.B.DARNELL,D.J.PATEL | 2ANR |
3A6P | FR3D | DE | 92 | 44 | 2.9 | 12-08-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP:PRE-MIRNA COMPLEX | C.OKADA,E.YAMASHITA,S.J.LEE,S.SHIBATA,J.KATAHIRA,A.NAKAGAWA, Y.YONEDA,T.TSUKIHARA | |
2QEK | FR3D | AB | 46 | 20 | 1.8 | 5-06-08 | synthetic | HIV-1 SUBTYPE F DIS RNA EXTENDED DUPLEX FORM | S.FREISZ,E.ENNIFAR,P.DUMAS | |
1NLC | FR3D | AB | 46 | 22 | 1.9 | 5-13-03 | synthetic | HIV-1 DIS(MAL) DUPLEX ZN-SOAKED | E.ENNIFAR,P.WALTER,P.DUMAS | 1WVD 1Y6T 1Y6S 2OIJ 462D 3DVV 1Y95 1O3Z 1Y73 2OJ0 2OIY 3C44 3FAR 1Y90 1Y99 |
1MWL | FR3D | AB | 42 | 18 | 2.4 | 2-18-03 | synthetic | CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE | Q.VICENS,E.WESTHOF | 2ET4 1YRJ 2BEE 2ET5 1LC4 2ESI 2F4T 2ET3 2ESJ 2G5Q 422D 1J7T 2PWT 2BE0 |
1XPE | FR3D | AB | 46 | 20 | 1.9 | 10-18-05 | synthetic | HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 2FD0 2FCY 1ZCI 1Y3S 1Y3O 1XP7 2B8R 1K9W 2B8S 1YXP 1XPF 2FCX 2FCZ |
2PJP | FR3D | B | 23 | 10 | 2.3 | 10-30-07 | ESCHERICHIA COLI | STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA | N.SOLER,D.FOURMY,S.YOSHIZAWA | |
2PLY | FR3D | E | 46 | 20 | 2.6 | 11-06-07 | MOORELLA THERMOACETICA | STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA. | N.SOLER,D.FOURMY,S.YOSHIZAWA | 1WSU 2UWM |
3BNL | FR3D | AB | 44 | 21 | 2.6 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING A SITE IN THE PRESENCE OF [CO(NH3)6]CL3 | J.KONDO,E.WESTHOF | |
3HTX | FR3D | BC | 88 | 40 | 3.1 | 9-29-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF SMALL RNA METHYLTRANSFERASE HEN1 | Y.HUANG,L.-J.JI,Q.-C.HUANG,D.G.VASSYLYEV,X.-M.CHEN,J.-B.MA | 1EFS |
3BNP | FR3D | AB | 43 | 16 | 2.7 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE (A1555G MUTANT) | J.KONDO,E.WESTHOF | 3BNN 3BNO |
2FQN | FR3D | AB | 43 | 18 | 2.3 | 2-14-06 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE | J.KONDO,A.URZHUMTSEV,E.WESTHOF | 2O3Y 2G5K 2O3W |
3BNQ | FR3D | AB | 86 | 32 | 2.0 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF SRCL2 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNS 3BNR |
3FTF | FR3D | CD | 44 | 20 | 2.8 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF A. AEOLICUS KSGA IN COMPLEX WITH RNA AND SAH | C.TU,X.JI | 3FTE |
3MEI | FR3D | AB | 44 | 19 | 2.0 | 1-26-11 | synthetic | REGULATORY MOTIF FROM THE THYMIDYLATE SYNTHASE MRNA | S.DIBROV,J.MCLEAN,T.HERMANN | |
2O3V | FR3D | AB | 43 | 17 | 2.8 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB33 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | |
1NTB | FR3D | AB | 40 | 15 | 2.9 | 5-13-03 | synthetic,synthetic | .9 A CRYSTAL STRUCTURE OF STREPTOMYCIN RNA-APTAMER COMPLEX | V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 1NTA |
2F8S | FR3D | CD | 44 | 18 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
3LOA | FR3D | AB | 42 | 15 | 2.3 | 8-04-10 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA CONSTRUCT WITH TWO ADJACENT LIGAND BINDING SITES OF HELIX H44 IN 16S RIBOSOMAL RNA | S.DIBROV | |
2W2H | FR3D | S | 44 | 7 | 3.3 | 12-09-08 | EQUINE INFECTIOUS ANEMIA VIRUS | STRUCTURAL BASIS OF TRANSCRIPTION ACTIVATION BY THE CYCLIN T1-TAT-TAR RNA COMPLEX FROM EIAV | K.ANAND,M.GEYER | |
1RLG | FR3D | D | 44 | 18 | 2.7 | 6-01-04 | synthetic | MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO- CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX | T.MOORE,Y.ZHANG,M.O.FENLEY,H.LI | |
1FEU | FR3D | BC | 80 | 32 | 2.3 | 6-25-01 | synthetic,synthetic | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | R.V.FEDOROV,V.A.MESHCHERYAKOV,G.M.GONGADZE,N.P.FOMENKOVA, N.A.NEVSKAYA,M.SELMER,M.LAURBERG,O.KRISTENSEN,S.AL- KARADAGHI,A.LILJAS,M.B.GARBER,S.V.NIKONOV | |
2O3X | FR3D | AB | 42 | 17 | 2.9 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE PROKARYOTIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB30 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | 2F4S |
1URN | FR3D | Q | 55 | 13 | 1.9 | 3-08-96 | synthetic | U1A MUTANT/RNA COMPLEX + GLYCEROL | C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI | |
1K8W | FR3D | B | 21 | 8 | 1.9 | 12-31-01 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI PSEUDOURIDINE SYNTHASE TRUB BOUND TO A T STEM-LOOP RNA | C.HOANG,A.R.FERRE-D'AMARE | 1ZL3 1ZE2 2AB4 |
1O9M | FR3D | AB | 42 | 17 | 2.4 | 3-27-03 | ESCHERICHIA COLI | THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY. | R.RUSSELL,J.B.MURRAY | 2F4U 2ET8 |
2ZKO | FR3D | CD | 42 | 18 | 1.7 | 10-14-08 | INFLUENZA A VIRUS | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUMAN INFLUENZA VIRUS A | Y.A.YUAN | |
1RPU | FR3D | CD | 42 | 19 | 2.5 | 1-13-04 | synthetic | CRYSTAL STRUCTURE OF CIRV P19 BOUND TO SIRNA | J.M.VARGASON,G.SZITTYA,J.BURGYAN,T.M.T.HALL | |
3DH3 | FR3D | EF | 84 | 26 | 3.0 | 4-28-09 | synthetic | CRYSTAL STRUCTURE OF RLUF IN COMPLEX WITH A 22 NUCLEOTIDE RNA SUBSTRATE | A.ALIAN,A.DEGIOVANNI,R.M.STROUD,J.S.FINER-MOORE | |
1EC6 | FR3D | C | 40 | 9 | 2.4 | 2-21-00 | synthetic | CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN | H.A.LEWIS,K.MUSUNURU,K.B.JENSEN,C.EDO,H.CHEN | |
2I82 | FR3D | E | 79 | 28 | 2.0 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE | C.HOANG | |
3NJ6 | FR3D | A | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | 3NJ7 |
361D | FR3D | AB | 40 | 9 | 3.0 | 7-01-98 | synthetic | CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP | M.PERBANDT,A.NOLTE,S.LORENZ,V.A.ERDMANN,C.BETZEL | |
1QC0 | FR3D | CD | 57 | 28 | 1.6 | 11-11-99 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
1DFU | FR3D | MN | 38 | 15 | 1.8 | 12-02-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION | M.LU,T.A.STEITZ | |
2ZI0 | FR3D | CD | 38 | 18 | 2.8 | 7-22-08 | synthetic | CRYSTAL STRUCTURE OF TAV2B/SIRNA COMPLEX | Y.A.YUAN,H.-Y.CHEN | |
2C4Z | FR3D | R | 26 | 10 | 2.6 | 1-05-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (2SU -5-6) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 2B2E 1AQ4 2C4Y 2BU1 1ZDH 5MSF 1ZDI 2IZM 1U1Y 2B2G 2C51 2BQ5 2BNY 1AQ3 2IZ8 2C4Q 1ZDK 2C50 2IZ9 |
1F27 | FR3D | AB | 30 | 14 | 1.3 | 6-12-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
1Q2R | FR3D | EF | 38 | 13 | 2.9 | 9-09-03 | synthetic | CHEMICAL TRAPPING AND CRYSTAL STRUCTURE OF A CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE COVALENT INTERMEDIATE | W.XIE,X.LIU,R.H.HUANG | 1Q2S |
1R9F | FR3D | BC | 38 | 19 | 1.9 | 1-27-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF P19 COMPLEXED WITH 19-BP SMALL INTERFERING RNA | K.YE,L.MALININA,D.J.PATEL | |
3CZ3 | FR3D | GH | 76 | 36 | 3.2 | 5-05-09 | synthetic,TOMATO ASPERMY VIRUS | CRYSTAL STRUCTURE OF TOMATO ASPERMY VIRUS 2B IN COMPLEX WITH SIRNA | J.B.MA,F.LI,S.W.DING,D.J.PATEL | |
1T0D | FR3D | AB | 64 | 28 | 2.2 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | 1T0E 1ZX7 2A04 1ZZ5 |
3OL9 | FR3D | JKLNOP | 140 | 62 | 2.3 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH 3'-DEOXY-CTP | P.GONG,O.B.PEERSEN | 3OLB 3OL6 3OL7 3OL8 3OLA |
3BT7 | FR3D | D | 36 | 11 | 2.4 | 4-29-08 | synthetic | STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE TRMA IN COMPLEX WITH 19 NUCLEOTIDE T-ARM ANALOGUE | A.ALIAN,R.M.STROUD,J.FINER-MOORE | |
3KS8 | FR3D | EF | 36 | 18 | 2.4 | 1-12-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMAIN IN COMPLEX WITH 18BP DSRNA | C.R.KIMBERLIN,Z.A.BORNHOLDT,S.LI,V.L.WOODS,I.J.MACRAE, E.O.SAPHIRE | |
1SI3 | FR3D | B | 18 | 6 | 2.6 | 5-25-04 | synthetic | CRYSTAL STRUCTURE OF THE PAZ DOMAIN OF HUMAN EIF2C1 IN COMPLEX WITH A 9-MER SIRNA-LIKE DUPLEX | K.YE,J.B.MA,D.PATEL | |
1ZEV | FR3D | AB | 36 | 13 | 1.6 | 10-25-05 | synthetic | CRYSTAL STRUCTURE OF A PATHOGENIC RNA: CUG REPEATS | B.H.MOOERS,J.S.LOGUE,J.A.BERGLUND | 3GM7 |
2GJW | FR3D | EFH | 71 | 32 | 2.9 | 9-12-06 | synthetic,synthetic,synthetic | RNA RECOGNITION AND CLEAVAGE BY AN SPLICING ENDONUCLEASE | S.XUE,K.CALVIN,H.LI | |
2OE5 | FR3D | AB | 33 | 14 | 1.5 | 2-13-07 | synthetic,synthetic | .5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'- OVERHANG | T.HERMANN,V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 2OE8 2OE6 |
2JLT | FR3D | AB | 32 | 15 | 2.9 | 8-18-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN RNA KISSING COMPLEX | C.DIPRIMO,S.FRIBOURG | |
1R3E | FR3D | DE | 50 | 20 | 2.1 | 11-04-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA-PROTEIN RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT | H.PAN,S.AGARWALLA,D.T.MOUSTAKAS,J.FINER-MOORE,R.M.STROUD | |
3L26 | FR3D | C | 16 | 8 | 2.4 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | 333D |
406D | FR3D | AE | 32 | 15 | 1.8 | 2-05-99 | engineered | '-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3' | S.A.SHAH,A.T.BRUNGER | |
1RXA | FR3D | A | 16 | 8 | 2.9 | 10-20-96 | synthetic | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | S.PORTMANN,N.USMAN,M.EGLI | |
1LU3 | FR3D | A | 16 | 3 | 16.8 | 6-26-02 | SACCHAROMYCES CEREVISIAE | SEPARATE FITTING OF THE ANTICODON LOOP REGION OF TRNA (NUCLEOTIDE 26-42) IN THE LOW RESOLUTION CRYO-EM MAP OF AN EF-TU TERNARY COMPLEX (GDP AND KIRROMYCIN) BOUND TO E. COLI 70S RIBOSOME | M.VALLE,J.SENGUPTA,N.K.SWAMI,R.A.GRASSUCCI,N.BURKHARDT, K.H.NIERHAUS,R.K.AGRAWAL,J.FRANK | |
1ZBH | FR3D | F | 32 | 10 | 3.0 | 9-26-06 | synthetic | '-END SPECIFIC RECOGNITION OF HISTONE MRNA STEM-LOOP BY 3'- EXONUCLEASE | Y.CHENG,D.J.PATEL | 1Q75 2KOC |
3AGV | FR3D | SU | 25 | 2 | 2.1 | 11-10-10 | synthetic | CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX | Y.NOMURA,S.SUGIYAMA,T.SAKAMOTO,S.MIYAKAWA,H.ADACHI,K.TAKANO, S.MURAKAMI,T.INOUE,Y.MORI,Y.NAKAMURA,H.MATSUMURA | |
1T0K | FR3D | CD | 27 | 11 | 3.2 | 7-20-04 | synthetic,synthetic | JOINT X-RAY AND NMR REFINEMENT OF YEAST L30E-MRNA COMPLEX | J.A.CHAO,J.R.WILLIAMSON | |
3DD2 | FR3D | B | 15 | 3 | 1.9 | 11-11-08 | synthetic | CRYSTAL STRUCTURE OF AN RNA APTAMER BOUND TO HUMAN THROMBIN | S.B.LONG,B.A.SULLENGER | |
2IZN | FR3D | R | 26 | 8 | 2.6 | 7-27-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (G-10) COMPLEX | C.HELGSTRAND,E.GRAHN,T.MOSS,N.J.STONEHOUSE,K.TARS, P.G.STOCKLEY,L.LILJAS | |
2AZ2 | FR3D | CD | 30 | 12 | 2.6 | 10-11-05 | synthetic | FLOCK HOUSE VIRUS B2-DSRNA COMPLEX (P4122) | J.A.CHAO,J.H.LEE,B.R.CHAPADOS,E.W.DEBLER,A.SCHNEEMANN, J.R.WILLIAMSON | 2AZ0 |
1DUQ | FR3D | AB | 104 | 44 | 2.1 | 5-16-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1 | L.-W.HUNG,E.L.HOLBROOK,S.R.HOLBROOK | 1CSL |
2F8K | FR3D | B | 15 | 6 | 2.0 | 1-24-06 | synthetic | SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1 | T.AVIV,Z.LIN,G.BEN-ARI,C.A.SMIBERT,F.SICHERI | |
1G2J | FR3D | A | 14 | 6 | 2.0 | 12-06-00 | synthetic | RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE | G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN, L.BEIGELMAN,M.EGLI | |
3ADI | FR3D | DE | 20 | 9 | 3.2 | 5-26-10 | synthetic,synthetic | STRUCTURE OF ARABIDOPSIS HYL1 AND ITS MOLECULAR IMPLICATIONS FOR MIRNA PROCESSING | Y.A.YUAN,H.Y.CHEN | 1TFY |
2B3J | FR3D | E | 28 | 7 | 2.0 | 1-24-06 | synthetic | CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DEAMINASE, TADA, IN COMPLEX WITH RNA | H.C.LOSEY,A.J.RUTHENBURG,G.L.VERDINE | |
2XLI | FR3D | B | 13 | 5 | 2.3 | 9-22-10 | PSEUDOMONAS AERUGINOSA | CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, MONOCLINIC FORM | R.E.HAURWITZ,M.JINEK,B.WIEDENHEFT,K.ZHOU,J.A.DOUDNA | 1QWA 2XLK 2RPT 2XLJ |
433D | FR3D | AB | 28 | 14 | 2.1 | 12-04-98 | synthetic | CRYSTAL STRUCTURE OF A 14 BASE PAIR RNA DUPLEX WITH NONSYMMETRICAL TANDEM G.U WOBBLE BASE PAIRS | J.TRIKHA,D.J.FILMAN,J.M.HOGLE | 1BYJ 1A3M 1PBR 2BJ6 |
2I91 | FR3D | CD | 22 | 7 | 2.6 | 10-17-06 | synthetic,synthetic | KDA RO AUTOANTIGEN IN COMPLEX WITH A FRAGMENT OF MISFOLDED RNA | K.M.REINISCH,A.J.STEIN | |
3OIN | FR3D | C | 14 | 4 | 1.9 | 12-01-10 | synthetic | CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NEP1/EMG1 BOUND TO S- ADENOSYLHOMOCYSTEINE AND 1 MOLECULE OF COGNATE RNA | S.R.THOMAS,N.LARONDE-LEBLANC | 3OIJ |
6MSF | FR3D | RS | 24 | 8 | 2.8 | 7-08-98 | ENTEROBACTERIO PHAGE MS2,synthetic | F6 APTAMER MS2 COAT PROTEIN COMPLEX | M.A.CONVERY,S.ROWSELL,N.J.STONEHOUSE,A.D.ELLINGTON,I.HIRAO, J.B.MURRAY,D.S.PEABODY,S.E.V.PHILLIPS,P.G.STOCKLEY | |
1MHK | FR3D | LS | 26 | 9 | 2.5 | 9-06-02 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF A 26MER RNA MOLECULE, REPRESENTING A NEW RNA MOTIF, THE HOOK-TURN | S.SZEP,J.WANG,P.B.MOORE | |
2R93 | FR3D | R | 14 | 6 | 4.0 | 11-27-07 | synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
7MSF | FR3D | R | 25 | 8 | 2.8 | 11-11-98 | ENTEROBACTERIO PHAGE MS2 | MS2 PROTEIN CAPSID/RNA COMPLEX | S.ROWSELL,N.J.STONEHOUSE,M.A.CONVERY,C.J.ADAMS, A.D.ELLINGTON,I.HIRAO,D.S.PEABODY,P.G.STOCKLEY, S.E.V.PHILLIPS | |
1L3Z | FR3D | A | 14 | 1 | 2.0 | 2-25-03 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER | K.SHI,B.PAN,M.SUNDARALINGAM | |
1NUJ | FR3D | CDEF | 96 | 37 | 1.8 | 8-19-03 | synthetic,synthetic | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | J.E.WEDEKIND,D.B.MCKAY | 1NUV 429D |
1FUF | FR3D | AB | 26 | 12 | 1.7 | 11-09-01 | synthetic | CRYSTAL STRUCTURE OF A 14BP RNA OLIGONUCLEOTIDE CONTAINING DOUBLE UU BULGES: A NOVEL INTRAMOLECULAR U*(AU) BASE TRIPLE | J.DENG,Y.XIONG,C.SUDARSANAKUMAR,K.SHI,M.SUNDARALINGAM | 1IK5 |
1TFW | FR3D | EH | 51 | 19 | 2.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
2R22 | FR3D | AB | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | 2R21 2R1S 2R20 |
3MQK | FR3D | DE | 22 | 5 | 2.8 | 12-29-10 | synthetic,synthetic | CBF5-NOP10-GAR1 COMPLEX BINDING WITH 17MER RNA CONTAINING ACA TRINUCLEOTIDE | J.ZHOU,B.LIANG,H.LI | |
1I9X | FR3D | AB | 26 | 12 | 2.2 | 9-05-01 | synthetic | CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX | J.A.BERGLUND,M.ROSBASH,S.C.SCHULTZ | |
1ZSE | FR3D | R | 12 | 4 | 3.0 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 2BS1 2BS0 |
354D | FR3D | AB | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI,ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
3CJZ | FR3D | AB | 24 | 10 | 1.8 | 10-14-08 | synthetic | EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS | P.S.PALLAN,C.KREUTZ,S.BOSIO,R.MICURA,M.EGLI | |
1SDR | FR3D | AB | 48 | 24 | 2.6 | 2-27-95 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE | H.SCHINDELIN,M.ZHANG,R.BALD,J.-P.FUERSTE,V.A.ERDMANN, U.HEINEMANN | |
3FTM | FR3D | AB | 46 | 18 | 2.7 | 2-24-09 | synthetic,synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 1 | J.N.PITT,A.R.FERRE-D'AMARE | 3FS0 |
1B7F | FR3D | PQ | 24 | 2 | 2.6 | 5-03-99 | synthetic | SXL-LETHAL PROTEIN/RNA COMPLEX | N.HANDA,O.NUREKI,K.KURIMOTO,I.KIM,H.SAKAMOTO,Y.SHIMURA, Y.MUTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1QBP | FR3D | AB | 72 | 29 | 2.1 | 11-26-99 | synthetic | CRYSTAL STRUCTURE OF A BROMINATED RNA HELIX WITH FOUR MISMATCHED BASE PAIRS | A.C.ANDERSON,R.H.O'NEIL,D.J.FILMAN,C.A.FREDERICK | 2KYD |
2Z2Q | FR3D | R | 720 | 60 | 2.7 | 7-15-08 | FLOCK HOUSE VIRUS | CRYSTAL STRUCTURE OF FLOCK HOUSE VIRUS | J.E.JOHNSON,Z.CHEN,V.REDDY | 2Q25 2Q23 2Q26 |
1QCU | FR3D | AB | 44 | 22 | 1.2 | 11-11-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
3LRR | FR3D | CD | 22 | 9 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 12 BP AU RICH 5' PPP DSRNA | P.LI | |
1LNT | FR3D | AB | 22 | 11 | 1.7 | 6-03-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP | J.DENG,Y.XIONG,B.PAN,M.SUNDARALINGAM | |
3IBK | FR3D | AB | 22 | 12 | 2.2 | 5-12-10 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA QUADRUPLEX | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
3HGA | FR3D | X | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
1DQH | FR3D | AB | 19 | 9 | 1.7 | 11-13-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS | Y.XIONG,M.SUNDARALINGAM | 1DQF |
3BSO | FR3D | PT | 16 | 7 | 1.7 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO CYTIDINE 5'-TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | 3H5X 3H5Y |
1ZH5 | FR3D | CD | 18 | 4 | 1.9 | 1-17-06 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN | M.TEPLOVA,Y.R.YUAN,S.ILIN,L.MALININA,A.T.PHAN,A.TEPLOV, D.J.PATEL | 1YTY |
1G2E | FR3D | B | 9 | 1 | 2.3 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA | X.WANG,T.M.T.HALL | |
1YVP | FR3D | CDG | 21 | 5 | 2.2 | 6-07-05 | synthetic,synthetic | RO AUTOANTIGEN COMPLEXED WITH RNAS | A.J.STEIN,G.FUCHS,C.FU,S.L.WOLIN,K.M.REINISCH | |
2AO5 | FR3D | AB | 36 | 16 | 2.1 | 3-28-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX R(GGCGBRUGCGCU)2 WITH TERMINAL AND INTERNAL TANDEM G-U BASE PAIRS | R.UTSUNOMIYA,K.SUTO,D.BALASUNDARESAN,A.FUKAMIZU,P.K.KUMAR, H.MIZUNO | |
2B2D | FR3D | R | 12 | 3 | 2.9 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP OPERATOR FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S,E89K MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | |
2E9Z | FR3D | BC | 16 | 4 | 3.0 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, ATP AND UTP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
2E9R | FR3D | AB | 15 | 6 | 2.8 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND WITH RIBAVIRIN | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
2G91 | FR3D | AB | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2GQ6 | FR3D | KL | 32 | 16 | 1.3 | 6-27-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2G32 2GQ7 2GQ4 2GPM |
2BGG | FR3D | PQ | 29 | 10 | 2.2 | 3-31-05 | synthetic,synthetic | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX. | J.S.PARKER,S.M.ROE,D.BARFORD | |
2E9T | FR3D | BC | 28 | 12 | 2.6 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE RNA DEPENDENT IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND 5F-UTP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
1JZV | FR3D | ABCD | 30 | 15 | 1.7 | 11-11-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA | Y.XIONG,C.SUDARSANAKUMAR,J.DENG,B.PAN,M.SUNDARALINGAM | |
402D | FR3D | AB | 16 | 8 | 2.3 | 6-16-98 | synthetic | '-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' | S.B.JANG,L.-W.HUNG,Y.-I.CHI,E.L.HOLBROOK,R.CARTER, S.R.HOLBROOK | |
398D | FR3D | AB | 24 | 8 | 1.9 | 10-06-98 | synthetic | '-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS- STRAND SYNTHESIS OF HIV REPLICATION | U.MUELLER,G.MEIER,A.MOCHI-ONORI,L.CELLAI,H.HEUMANN | |
472D | FR3D | AB | 16 | 8 | 1.9 | 11-27-00 | synthetic,synthetic | STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS | J.DENG,M.SUNDARALINGAM | |
3GLP | FR3D | AB | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
259D | FR3D | AB | 16 | 8 | 1.5 | 8-26-96 | synthetic | RNA HYDRATION: A DETAILED LOOK | M.EGLI,S.PORTMANN,N.USMAN | 1RXB |
2G3S | FR3D | AB | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | 1EKD |
3BSN | FR3D | PT | 16 | 6 | 1.8 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO 5-NITROCYTIDINE TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | |
1N35 | FR3D | BC | 13 | 5 | 2.5 | 12-25-02 | synthetic,synthetic | LAMBDA3 ELONGATION COMPLEX WITH FOUR PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | 1UON |
1SA9 | FR3D | AB | 40 | 16 | 2.9 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE RNA OCTAMER GGCGAGCC | S.B.JANG,K.BAEYENS,M.S.JEONG,J.SANTALUCIA JR,D.TURNER, S.R.HOLBROOK | 1YFV |
1ZDJ | FR3D | R | 16 | 4 | 2.9 | 7-08-98 | ENTEROBACTERIO PHAGE MS2 | STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX | E.GRAHN,N.STONEHOUSE,K.VALEGARD,S.VANDENWORM,L.LILJAS | |
439D | FR3D | AB | 16 | 8 | 1.6 | 9-14-01 | synthetic,synthetic | '-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R(*CP*CP*GP*CP*CP*UP*GP*G)-3' | M.PERBANDT,S.LORENZ,M.VALLAZZA,V.A.ERDMANN,C.BETZEL | |
1J9H | FR3D | AB | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
438D | FR3D | AB | 16 | 8 | 2.5 | 5-12-99 | synthetic | STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS | K.SHI,M.C.WAHL,M.SUNDARALINGAM | |
1WNE | FR3D | BC | 13 | 4 | 3.0 | 8-31-04 | synthetic,synthetic | FOOT AND MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
1FXL | FR3D | B | 8 | 1 | 1.8 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA | X.WANG,T.M.T.HALL | |
2EC0 | FR3D | BC | 30 | 14 | 2.8 | 6-26-07 | synthetic,synthetic | RNA-DEPENDENT RNA POLYMERASE OF FOOT-AND-MOUTH DISEASE VIRUS IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND ATP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
3EQT | FR3D | CD | 16 | 8 | 2.0 | 3-10-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA | P.LI,X.LI | |
165D | FR3D | AB | 16 | 8 | 1.6 | 8-31-94 | synthetic | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | W.CRUSE,P.SALUDJIAN,E.BIALA,P.STRAZEWSKI,T.PRANGE,O.KENNARD | |
3L25 | FR3D | CF | 16 | 8 | 2.0 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
435D | FR3D | AB | 28 | 14 | 1.4 | 6-14-99 | synthetic,synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | |
2VAL | FR3D | AC | 28 | 14 | 2.0 | 10-16-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX AT 2.0 ANGSTROM RESOLUTION | C.FORSTER,A.B.E.BRAUER,M.PERBANDT,D.LEHMANN,J.P.FURSTE, C.BETZEL,V.A.ERDMANN | |
2V6W | FR3D | AB | 14 | 7 | 1.8 | 11-06-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | TRNASER ACCEPTOR STEM: CONFORMATION AND HYDRATION OF A MICROHELIX IN A CRYSTAL STRUCTURE AT 1.8 ANGSTROM RESOLUTION | C.FOERSTER,A.B.E.BRAUER,S.BRODE,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN | |
409D | FR3D | AB | 42 | 18 | 2.5 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES | B.PAN,S.N.MITRA,L.SUN,D.HART,M.SUNDARALINGAM | |
3KMS | FR3D | BC | 12 | 5 | 2.2 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA TRIGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | 3KLV 3KNA |
1SAQ | FR3D | AB | 14 | 6 | 2.7 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE RNA OCTAMER GIC(GA)GCC | S.B.JANG,K.BAEYENS,M.S.JEONG,J.SANTALUCIA JR,D.TURNER, S.R.HOLBROOK | |
3GVN | FR3D | AB | 14 | 7 | 1.2 | 7-28-09 | synthetic,synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
466D | FR3D | AB | 28 | 14 | 1.2 | 8-16-99 | synthetic,synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 464D 434D |
2V7R | FR3D | AB | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
2VUQ | FR3D | AB | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2A0P | FR3D | AB | 14 | 6 | 2.0 | 8-16-05 | synthetic | CRYSTAL STRUCTURE OF RNA OLIGOMER CONTAINING 4'-THIORIBOSE | P.HAEBERLI,I.BERGER,P.S.PALLAN,M.EGLI | |
2W89 | FR3D | AB | 28 | 14 | 2.0 | 11-17-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E.COLI TRNAARG AMINOACYL STEM ISSOACCEPTOR RR-1660 AT 2.0 ANGSTROEM RESOLUTION | A.EICHERT,A.SCHREIBER,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
1OSU | FR3D | A | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
1J8G | FR3D | A | 24 | 20 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
3MDI | FR3D | C | 6 | 1 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UGUAAA | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3G9Y | FR3D | C | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
2GXB | FR3D | EF | 12 | 6 | 2.3 | 5-01-07 | synthetic | CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA | A.ATHANASIADIS,D.PLACIDO,A.RICH | 1T4X |
3MDG | FR3D | C | 6 | 1 | 2.2 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UUGUAU | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3KMQ | FR3D | BC | 10 | 5 | 2.1 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, TETRAGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
1N38 | FR3D | BC | 7 | 2 | 2.8 | 12-25-02 | synthetic,synthetic | REOVIRUS POLYMERASE LAMBDA3 ELONGATION COMPLEX WITH ONE PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | |
3JXR | FR3D | AB | 10 | 4 | 1.3 | 2-09-10 | synthetic | X-RAY STRUCTURE OF R[CGCG(5-FLUORO)CG]2 | D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK,W.RYPNIEWSKI | 3JXQ |
1J6S | FR3D | A | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | |
377D | FR3D | AB | 20 | 8 | 1.8 | 8-10-98 | synthetic | '-R(*CP*GP*UP*AP*CP*DG)-3' | R.BISWAS,S.N.MITRA,M.SUNDARALINGAM | |
3KOA | FR3D | BC | 9 | 3 | 2.4 | 7-07-10 | synthetic,synthetic | M296I MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA AND GTP | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
1P79 | FR3D | A | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
1YTU | FR3D | CD | 9 | 4 | 2.5 | 4-05-05 | synthetic,synthetic | STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN | J.B.MA,Y.R.YUAN,G.MEISTER,Y.PEI,T.TUSCHL,D.J.PATEL | |
2AWE | FR3D | ABCD | 39 | 24 | 2.1 | 2-07-06 | engineered | BASE-TETRAD SWAPPING RESULTS IN DIMERIZATION OF RNA QUADRUPLEXES: IMPLICATIONS FOR FORMATION OF I-MOTIF RNA OCTAPLEX | B.PAN,K.SHI,M.SUNDARALINGAM | |
2GRB | FR3D | EFGH | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
1MDG | FR3D | A | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |