PDBID | FR3D analysis | Chain(s) | NTs | Pairs | Res | Date | Organism | Description provided by author | Author | Also represents |
3IZ9 | FR3D | ABC | 3472 | 1317 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3O58 | FR3D | 123 | 3485 | 1088 | 4.0 | 12-15-10 | SACCHAROMYCES CEREVISIAE S288C,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | YEAST 80S RIBOSOME. THIS ENTRY CONSISTS OF THE 60S SUBUNIT OF THE FIRST 80S IN THE ASYMMETRIC UNIT. | A.BEN-SHEM,L.JENNER,G.YUSUPOVA,M.YUSUPOV | 3O5H Compare |
3IZF | FR3D | ABC | 3436 | 1231 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME (WITH ES27L-IN CONFORMATION) | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3JYX | FR3D | 345 | 3440 | 684 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 60S RRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
3PYO | FR3D | AB | 2879 | 1288 | 3.5 | 2-09-11 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 FROM THE PSIV IGR IRES RNA BOUND TO THE 70S RIBOSOME. THIS FILE CONTAINS THE 50S SUBUNIT OF THE FIRST 70S RIBOSOME. | J.ZHU,A.KOROSTELEV,D.COSTANTINO,H.F.NOLLER,J.S.KIEFT | 3OH5 3OHZ 3OI3 3OHK 3OHJ 3OI1 3OH7 3OI5 3PYT 3PYR 3PYV 2V47 3HUX 2V49 2J03 2J01 3KNO 3HUZ 3KNM 3KNK 3KNI 2XG2 2WDJ 2WDN 2WDI 2WDL 2XG0 2B66 2B9N 2B9P 3KIR 3KIT 3KIW 3KIY 3FIN 1YL3 3D5D 3F1F 3MRZ 3D5B 3MS1 3F1H 3I9C 2WH2 3I9E 2WH4 2HGU 2HGJ 1VSP 1VSA 2HGQ 2Y19 2XTG 2Y17 2WRR 2Y0X 2WRJ 2Y11 2WRO 2XQE 2XUX 2X9U 2Y15 2Y0V 2Y0Z 2X9S 2WRL 2Y13 3I8F 3I8I Compare |
2QBG | FR3D | AB | 2958 | 1357 | 3.3 | 9-25-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI IN COMPLEX WITH RIBOSOME RECYCLING FACTOR (RRF). THIS FILE CONTAINS THE 50S SUBUNIT OF THE SECOND 70S RIBOSOME, WITH RRF BOUND. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | M.A.BOROVINSKAYA,R.D.PAI,W.ZHANG,B.-S.SCHUWIRTH,J.M.HOLTON, G.HIROKAWA,H.KAJI,A.KAJI,J.H.D.CATE | 2GYA 2GYC 2QOZ 2QAM 3I1T 3OFD 3DF4 3BBX 2Z4N 2VHM 2QP1 2QBA 3OAS 1VS8 1VT2 2QBI 2Z4L 2I2T 2VHN 2I2V 2QBE 3OG0 2J28 2QOX 2AW4 3DF2 3I22 1VS6 2QOV 2AWB 2QAO 3OFQ 2QBK 3I1P 2QBC 3OFC 3OFZ 3ORB 3I20 3OFR 3I1N 3I1R 3OAT 3IZU 3IZT 3FIK 2WWQ 3E1D 3E1B 3KCR 3J01 Compare |
1C2W | FR3D | B | 2891 | 846 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
1PNU | FR3D | 09 | 2943 | 938 | 8.7 | 7-15-03 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF A STREPTOMYCIN DEPENDENT RIBOSOME FROM ESCHERICHIA COLI, 50S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNU, CONTAINS ONLY MOLECULES OF THE 50S RIBOSOMAL SUBUNIT. THE 30S SUBUNIT, MRNA, P-SITE TRNA, AND A-SITE TRNA ARE IN THE PDB FILE 1PNS. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VP0 1VOW 1PNY 1VOR 1VOY 1VOU Compare |
2ZJR | FR3D | XY | 2808 | 1180 | 2.9 | 6-17-08 | DEINOCOCCUS RADIODURANS,DEINOCOCCUS RADIODURANS | REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS | J.M.HARMS,D.N.WILSON,F.SCHLUENZEN,S.R.CONNELL,T.STACHELHAUS, Z.ZABOROWSKA,C.M.T.SPAHN,P.FUCINI | 3PIP 3PIO 3DLL 2ZJP 2ZJQ 3CF5 1P9X 1OND 3FWO 2OGO 3JQ4 2O43 2AAR 2OGM 2O44 1NWX 1NJO 2OGN 1NWY 1Z58 2O45 1NJM 1NJP 1NKW 1Y69 1XBP 1SM1 1NJN 1JZZ 1J5A 1K01 1JZY 1JZX 2D3O Compare |
1S1I | FR3D | 34 | 2916 | 1316 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1I, CONTAINS 60S SUBUNIT. THE 40S RIBOSOMAL SUBUNIT IS IN FILE 1S1H. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1S72 | FR3D | 09 | 2871 | 1376 | 2.4 | 6-15-04 | HALOARCULA MARISMORTUI,HALOARCULA MARISMORTUI | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | D.J.KLEIN,T.M.SCHMEING,P.B.MOORE,T.A.STEITZ | 1FFZ 1FG0 1FFK 3CMA 2QA4 3CME 1VQK 2QEX 1VQ4 3CCL 1VQO 3CCQ 3CD6 1VQ8 3I55 3CC7 1YJW 2OTJ 3CCM 1VQ7 1VQ9 1YI2 3I56 3CC4 3G71 1VQN 3CCJ 3G4S 3CCS 1YHQ 1VQ6 1VQM 2OTL 3CCV 1YJ9 1YIJ 3CCR 1VQL 1VQ5 3CCE 3CC2 1VQP 1YIT 3G6E 3CCU 1YJN 1NJI 1K9M 1Q86 1M90 1KC8 1K73 1Q82 1M1K 1KQS 1K8A 1W2B 1QVG 1N8R 1JJ2 3CPW 1Q7Y 1QVF 1Q81 3CXC 1KD1 Compare |
3BBO | FR3D | ABC | 2952 | 824 | 9.4 | 5-27-08 | SPINACEA OLERACEA,SPINACEA OLERACEA,SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 50S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
3IZE | FR3D | ABC | 1582 | 438 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | 3O30 3O2Z Compare |
3JYV | FR3D | 7A | 1820 | 506 | 8.9 | 12-22-09 | THERMOMYCES LANUGINOSUS,THERMOMYCES LANUGINOSUS | STRUCTURE OF THE 40S RRNA AND PROTEINS AND P/E TRNA FOR EUKARYOTIC RIBOSOME BASED ON CRYO-EM MAP OF THERMOMYCES LANUGINOSUS RIBOSOME AT 8.9A RESOLUTION | D.J.TAYLOR,B.DEVKOTA,A.D.HUANG,M.TOPF,E.NARAYANAN,A.SALI,S.C.HARVEY, J.FRANK | |
2XZM | FR3D | A | 1745 | 555 | 3.9 | 1-19-11 | TETRAHYMENA THERMOPHILA | CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1 | J.RABL,M.LEIBUNDGUT,S.F.ATAIDE,A.HAAG,N.BAN | 2XZN Compare |
2AW7 | FR3D | A | 1530 | 686 | 3.5 | 11-08-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROM ESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF THE SECOND 70S RIBOSOME. THE ENTIRE CRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED IN REMARK 400. | B.S.SCHUWIRTH,M.A.BOROVINSKAYA,C.W.HAU,W.ZHANG,A.VILA- SANJURJO,J.M.HOLTON,J.H.D.CATE | 2GYB 2GY9 3E1C 2QOW 2QP0 1VS7 2Z4K 2I2P 2WWL 2QBD 2AVY 2I2U 2VHO 2QAN 3FIH 3OFB 2QBF 2QBH 3OAR 3ORA 3KC4 2VHP 1VS5 3E1A 2QBJ 2QBB 2QAL 3I1O 3OFP 3DF1 3OFY 3DF3 3I1S 2QB9 2Z4M 2QOY 2QOU 3I21 3IZV 3IZW 3I1M 3I1Z 3OAQ 3I1Q 3OFX 3OR9 3OFA 3OFO 3J00 Compare |
1PNX | FR3D | A | 1533 | 661 | 9.5 | 7-15-03 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE WILD TYPE RIBOSOME FROM E. COLI, 30S SUBUNIT OF 70S RIBOSOME. THIS FILE, 1PNX, CONTAINS ONLY MOLECULES OF THE 30S RIBOSOMAL SUBUNIT. THE 50S SUBUNIT IS IN THE PDB FILE 1PNY. | A.VILA-SANJURJO,W.K.RIDGEWAY,V.SEYMANER,W.ZHANG,S.SANTOSO, K.YU,J.H.D.CATE | 1VOS 1VOV 1VOZ 1VOX 1VOQ 1PNS Compare |
1FJG | FR3D | AX | 1513 | 690 | 3.0 | 9-25-00 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | A.P.CARTER,W.M.CLEMONS JR.,D.E.BRODERSEN,B.T.WIMBERLY, R.J.MORGAN-WARREN,V.RAMAKRISHNAN | 1FKA 2UXD 2OW8 3KNN 3KNH 3HUW 3KNL 3KNJ 2WH3 2Y0Y 2XQD 3F1G 3FIC 2X9T 2WRI 2V46 2WRN 3OHD 2XSY 2Y12 3HUY 3OI2 2Y16 3MR8 3OHY 3MS0 3OGE 3F1E 2WDM 2WH1 3KIX 2X9R 2J00 2XUY 3OI0 3KIS 3D5A 2WRK 3OI4 2WDG 3OGY 2Y14 2WDK 3D5C 2J02 3KIQ 3OHC 2QNH 2V48 3KIU 2WRQ 2WDH 2HHH 2XFZ 3PYQ 2ZM6 3PYU 3PYN 1IBK 3PYS 1HR0 2XG1 1HNZ 1XMO 1HNX 1IBM 1XNR 1IBL 1XNQ 1HNW 2F4V 1XMQ 2Y18 2Y0W 2Y10 2Y0U 2UUC 2UUB 2UUA 2UU9 1N34 2VQF 2UXB 2VQE 2UXC 1N32 3OTO 1N36 1N33 1J5E 1I96 1I95 1I97 1I94 2HGP 1YL4 3I9D 2B9M 2HGR 2HGI 2B9O 3I8H 2B64 3I8G 2E5L 3I9B Compare |
3IZ7 | FR3D | ABC | 1586 | 477 | 5.5 | 12-01-10 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
3BBN | FR3D | A | 1478 | 544 | 9.4 | 5-13-08 | SPINACEA OLERACEA | HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME. | M.R.SHARMA,D.N.WILSON,P.P.DATTA,C.BARAT,F.SCHLUENZEN, P.FUCINI,R.K.AGRAWAL | |
1S1H | FR3D | A | 1466 | 626 | 11.7 | 5-25-04 | SACCHAROMYCES CEREVISIAE | STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP. THIS FILE, 1S1H, CONTAINS 40S SUBUNIT. THE 60S RIBOSOMAL SUBUNIT IS IN FILE 1S1I. | C.M.SPAHN,M.G.GOMEZ-LORENZO,R.A.GRASSUCCI,R.JORGENSEN, G.R.ANDERSEN,R.BECKMANN,P.A.PENCZEK,J.P.G.BALLESTA,J.FRANK | |
1H1K | FR3D | IJKLMN | 1906 | 953 | 10.0 | 9-26-02 | BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS,BLUETONGUE VIRUS | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA | J.M.DIPROSE,J.M.GRIMES,G.C.SUTTON,J.N.BURROUGHS,A.MEYER, S.MAAN,P.P.C.MERTENS,D.I.STUART | |
3G78 | FR3D | AZ | 398 | 181 | 2.8 | 2-16-10 | OCEANOBACILLUS IHEYENSIS,synthetic | INSIGHT INTO GROUP II INTRON CATALYSIS FROM REVISED CRYSTAL STRUCTURE | J.WANG | 3BWP 3EOH 3EOG 3IGI Compare |
3IZ4 | FR3D | A | 377 | 105 | 13.6 | 10-20-10 | ESCHERICHIA COLI | MODIFIED E. COLI TMRNA IN THE RESUME STATE WITH THE TRNA-LIKE DOMAIN IN THE RIBOSOMAL P SITE INTERACTING WITH THE SMPB | Y.HASHEM,J.FU,J.FRANK | |
3IYR | FR3D | A | 349 | 54 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3IYQ | FR3D | A | 349 | 58 | 13.0 | 10-20-10 | THERMUS THERMOPHILUS | TMRNA-SMPB: A JOURNEY TO THE CENTER OF THE BACTERIAL RIBOSOME | F.WEIS,P.BRON,E.GIUDICE,J.P.ROLLAND,D.THOMAS,B.FELDEN,R.GILLET | |
3Q1Q | FR3D | BC | 423 | 171 | 3.8 | 3-09-11 | synthetic,synthetic | STRUCTURE OF A BACTERIAL RIBONUCLEASE P HOLOENZYME IN COMPLEX WITH TRNA | N.J.REITER,A.OSTERMAN,A.TORRES-LARIOS,K.K.SWINGER,T.PAN,A.MONDRAGON | 2A2E 3Q1R Compare |
2A64 | FR3D | A | 298 | 117 | 3.3 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF BACTERIAL RIBONUCLEASE P RNA | A.V.KAZANTSEV,A.A.KRIVENKO,D.J.HARRINGTON,S.R.HOLBROOK, P.D.ADAMS,N.R.PACE | |
2J37 | FR3D | AZ | 408 | 164 | 8.0 | 11-08-06 | HALOARCULA MARISMORTUI,TRITICUM SP. | MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS | M.HALIC,M.BLAU,T.BECKER,T.MIELKE,M.R.POOL,K.WILD,I.SINNING, R.BECKMANN | |
1X8W | FR3D | A | 242 | 95 | 3.8 | 11-09-04 | synthetic | STRUCTURE OF THE TETRAHYMENA RIBOZYME: BASE TRIPLE SANDWICH AND METAL ION AT THE ACTIVE SITE | F.GUO,A.R.GOODING,T.R.CECH | 1GRZ Compare |
2RKJ | FR3D | CDGH | 968 | 318 | 4.5 | 1-08-08 | NEUROSPORA CRASSA,STAPHYLOCOCCUS PHAGE TWORT | COCRYSTAL STRUCTURE OF A TYROSYL-TRNA SYNTHETASE SPLICING FACTOR WITH A GROUP I INTRON RNA | P.J.PAUKSTELIS,J.-H.CHEN,E.CHASE,A.M.LAMBOWITZ,B.L.GOLDEN | |
1Y0Q | FR3D | AB | 233 | 89 | 3.6 | 12-21-04 | STAPHYLOCOCCUS PHAGE TWORT,synthetic | CRYSTAL STRUCTURE OF AN ACTIVE GROUP I RIBOZYME-PRODUCT COMPLEX | B.L.GOLDEN,H.KIM,E.CHASE | |
3DHS | FR3D | A | 215 | 80 | 3.6 | 1-27-09 | synthetic | MAPPING METAL-BINDING SITES IN THE CATALYTIC DOMAIN OF BACTERIAL RNASE P RNA | N.R.PACE,A.V.KAZANTSEV,A.A.KRIVENKO | |
1U6B | FR3D | BCD | 219 | 108 | 3.1 | 8-10-04 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS | P.L.ADAMS,M.R.STAHLEY,A.B.KOSEK,J.WANG,S.A.STROBEL | 1ZZN 3IIN 3BO4 3BO3 3BO2 Compare |
2NOQ | FR3D | ABCDE | 317 | 115 | 7.3 | 11-21-06 | synthetic,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA | M.SCHULER,S.R.CONNELL,A.LESCOUTE,J.GIESEBRECHT,M.DABROWSKI, B.SCHROEER,T.MIELKE,P.A.PENCZEK,E.WESTHOF,C.M.T.SPAHN | |
3DIR | FR3D | A | 172 | 81 | 2.9 | 9-16-08 | synthetic | CRYSTALLIZATION OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO N6-1-IMINOETHYL-L-LYSINE | A.A.SERGANOV | 3DIY 3DIS 3DIL 3DIZ 3DJ2 3DIM 3DIQ 3DIX 3DIO 3DIG 3DJ0 Compare |
3P49 | FR3D | A | 169 | 48 | 3.5 | 4-06-11 | synthetic | CRYSTAL STRUCTURE OF A GLYCINE RIBOSWITCH FROM FUSOBACTERIUM NUCLEATUM | E.B.BUTLER,J.WANG,Y.XIONG,S.STROBEL | |
3D0U | FR3D | A | 161 | 76 | 2.8 | 7-01-08 | synthetic | CRYSTAL STRUCTURE OF LYSINE RIBOSWITCH BOUND TO LYSINE | A.D.GARST,A.HEROUX,R.P.RAMBO,R.T.BATEY | 3D0X Compare |
2QBZ | FR3D | X | 153 | 73 | 2.6 | 9-18-07 | synthetic | STRUCTURE OF THE M-BOX RIBOSWITCH APTAMER DOMAIN | C.E.DANN III,W.C.WINKLER | 3PDR Compare |
1GID | FR3D | AB | 316 | 153 | 2.5 | 12-31-96 | SYNTHETIC CONSTRUCT | CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING | J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN,C.E.KUNDROT, T.R.CECH,J.A.DOUDNA | 1L8V 1HR2 2R8S Compare |
1U9S | FR3D | A | 155 | 73 | 2.9 | 10-26-04 | synthetic | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P OF THE A-TYPE | A.S.KRASILNIKOV,Y.XIAO,T.PAN,A.MONDRAGON | |
1NBS | FR3D | AB | 270 | 114 | 3.1 | 2-18-03 | BACILLUS SUBTILIS | CRYSTAL STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA | A.S.KRASILNIKOV,X.YANG,T.PAN,A.MONDRAGON | |
2NZ4 | FR3D | GHRS | 594 | 238 | 2.5 | 1-16-07 | synthetic,synthetic | STRUCTURAL INVESTIGATION OF THE GLMS RIBOZYME BOUND TO ITS CATALYTIC COFACTOR | J.C.COCHRANE | 3G8S 3L3C 3G8T 3G96 3G9C Compare |
3IZD | FR3D | A | 138 | 59 | 10.0 | 12-01-10 | SACCHAROMYCES CEREVISIAE | MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF. | J.-P.ARMACHE,A.JARASCH,A.M.ANGER,E.VILLA,T.BECKER,S.BHUSHAN, F.JOSSINET,M.HABECK,G.DINDAR,S.FRANCKENBERG,V.MARQUEZ,T.MIELKE, M.THOMM,O.BERNINGHAUSEN,B.BEATRIX,J.SOEDING,E.WESTHOF,D.N.WILSON, R.BECKMANN | |
1LNG | FR3D | B | 97 | 44 | 2.3 | 6-07-02 | METHANOCALDOCOCCUS JANNASCHII | CRYSTAL STRUCTURE OF THE SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII | T.HAINZL,S.HUANG,A.E.SAUER-ERIKSSON | 2V3C 1Z43 3NDB Compare |
3IVK | FR3D | C | 256 | 114 | 3.1 | 3-02-10 | synthetic | CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF AN RNA POLYMERASE RIBOZYME COMPLEXED WITH AN ANTIGEN BINDING ANTIBODY FRAGMENT | Y.KOLDOBSKAYA,E.M.DUGUID,D.M.SHECHNER,S.KOIDE, A.A.KOSSIAKOFF,D.P.BARTEL,J.A.PICCIRILLI | 3HHN Compare |
2IL9 | FR3D | AM | 267 | 49 | 3.1 | 2-13-07 | synthetic | CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS | J.S.PFINGSTEN,D.A.COSTANTINO,J.S.KIEFT | |
1MFQ | FR3D | A | 127 | 53 | 3.1 | 9-20-02 | HOMO SAPIENS | CRYSTAL STRUCTURE ANALYSIS OF A TERNARY S-DOMAIN COMPLEX OF HUMAN SIGNAL RECOGNITION PARTICLE | A.KUGLSTATTER,C.OUBRIDGE,K.NAGAI | 3KTV 1L9A 2GO5 1RY1 Compare |
2HO7 | FR3D | AB | 141 | 64 | 2.9 | 9-26-06 | synthetic,synthetic | PRE-CLEAVAGE STATE OF THE THERMOANAEROBACTER TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSE-6-PHOSPHATE | D.J.KLEIN,A.R.FERRE-D'AMARE | 3B4A 3B4C 2H0X 2GCV 2HO6 2GCS 2Z74 2Z75 2H0S 2H0W 2H0Z 3B4B Compare |
1C2X | FR3D | C | 120 | 35 | 7.5 | 4-10-00 | ESCHERICHIA COLI | S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION | R.BRIMACOMBE,F.MUELLER | |
3NPB | FR3D | A | 119 | 46 | 3.0 | 11-03-10 | BACILLUS SUBTILIS | TL5 RNA STRUCTURE | C.LU | |
3IZZ | FR3D | ABDE | 337 | 122 | 10.8 | 3-30-11 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | MODELS FOR RIBOSOME COMPONENTS THAT ARE NEAREST NEIGHBORS TO THE BOVINE MITOCHONDRIAL INITIATION FACTOR2 BOUND TO THE E. COLI RIBOSOME | A.S.YASSIN,E.HAQUE,P.P.DATTA,K.ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
1FOQ | FR3D | A | 545 | 200 | 20.0 | 12-22-00 | BACILLUS PHAGE PHI29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | A.A.SIMPSON,Y.TAO,P.G.LEIMAN,M.O.BADASSO,Y.HE,P.J.JARDINE, N.H.OLSON,M.C.MORAIS,S.GRIMES,D.L.ANDERSON,T.S.BAKER, M.G.ROSSMANN | |
3F4G | FR3D | XY | 109 | 51 | 3.0 | 1-27-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO RIBOFLAVIN. | A.A.SERGANOV,L.HUANG | 3F4H 3F4E 3F2T 3F2Q 3F2Y 3F2W 3F30 3F2X Compare |
2KRL | FR3D | A | 102 | 22 | SOLUTION NMR; SOLUTION SCATTERING | 2-09-11 | TURNIP CRINKLE VIRUS | THE ENSEMBLE OF THE SOLUTION GLOBAL STRUCTURES OF THE 102-NT RIBOSOME BINDING STRUCTURE ELEMENT OF THE TURNIP CRINKLE VIRUS 3' UTR RNA | X.ZUO,J.WANG,P.YU,D.EYLER,H.XU,M.STARICH,D.TIEDE,A.SIMON,W.KASPRZAK, C.SCHWIETERS,B.SHAPIRO | |
2XXA | FR3D | G | 204 | 80 | 3.9 | 3-02-11 | DEINOCOCCUS RADIODURANS | THE CRYSTAL STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE (SRP) IN COMPLEX WITH ITS RECEPTOR(SR) | S.F.ATAIDE,N.SCHMITZ,K.SHEN,A.KE,S.SHAN,J.A.DOUDNA,N.BAN | |
1S9S | FR3D | A | 2020 | 754 | SOLUTION NMR | 4-06-04 | synthetic | SOLUTION STRUCTURE OF MLV PSI SITE | V.D'SOUZA,A.DEY,D.HABIB,M.F.SUMMERS | |
1YSH | FR3D | ABF | 162 | 65 | 9.5 | 7-05-05 | synthetic,synthetic,synthetic | LOCALIZATION AND DYNAMIC BEHAVIOR OF RIBOSOMAL PROTEIN L30E | M.HALIC,T.BECKER,J.FRANK,C.M.SPAHN,R.BECKMANN | |
3KTW | FR3D | C | 96 | 35 | 3.2 | 2-16-10 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE SRP19/S-DOMAIN SRP RNA COMPLEX OF SULFOLOBUS SOLFATARICUS | K.WILD,G.BANGE,G.BOZKURT,I.SINNING | |
2PXV | FR3D | B | 49 | 22 | 2.0 | 8-07-07 | synthetic | VARIANT 6 OF RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT | 2PXL 1DUL 3LQX 1HQ1 2PXK 2PXD 2PXU 2PXQ 2PXF 2PXB 2PXT 2PXP 2PXE 2XKV Compare |
2OM7 | FR3D | ABCDFGHIJM | 455 | 151 | 7.3 | 1-15-08 | THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS | STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS | S.R.CONNELL,D.N.WILSON,M.ROST,M.SCHUELER,J.GIESEBRECHT, M.DABROWSKI,T.MIELKE,P.FUCINI,C.M.T.SPAHN | |
2GIS | FR3D | A | 94 | 44 | 2.9 | 7-04-06 | synthetic | STRUCTURE OF THE S-ADENOSYLMETHIONINE RIBOSWITCH MRNA REGULATORY ELEMENT | R.K.MONTANGE,R.T.BATEY | 3GX6 3GX3 3IQR 3GX2 3IQP 3GX7 3IQN 3GX5 Compare |
1U6P | FR3D | B | 2000 | 727 | SOLUTION NMR | 11-02-04 | MOLONEY MURINE LEUKEMIA VIRUS | NMR STRUCTURE OF THE MLV ENCAPSIDATION SIGNAL BOUND TO THE NUCLEOCAPSID PROTEIN | V.D'SOUZA,M.F.SUMMERS | |
3IWN | FR3D | A | 93 | 35 | 3.2 | 11-10-09 | synthetic | CO-CRYSTAL STRUCTURE OF A BACTERIAL C-DI-GMP RIBOSWITCH | N.KULSHINA,N.J.BAIRD,A.R.FERRE-D'AMARE | |
3ADD | FR3D | C | 176 | 73 | 2.4 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 3) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | 3ADB Compare |
3CUN | FR3D | C | 91 | 34 | 3.0 | 6-24-08 | HOMO SAPIENS | AMINOACYL-TRNA SYNTHETASE RIBOZYME | H.XIAO,H.MURAKAMI,H.SUGA,A.R.FERRE-D'AMARE | 3CUL Compare |
1M5O | FR3D | DE | 224 | 94 | 2.2 | 10-12-02 | synthetic,synthetic | TRANSITION STATE STABILIZATION BY A CATALYTIC RNA | P.B.RUPERT,A.P.MASSEY,S.T.SIGURDSSON,A.R.FERRE-D'AMARE | 1M5K 1M5V 1M5P Compare |
3ADC | FR3D | C | 180 | 70 | 2.9 | 7-28-10 | METHANOPYRUS KANDLERI | CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WITH SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 2) | Y.ITOH,S.CHIBA,S.SEKINE,S.YOKOYAMA | |
3MUR | FR3D | R | 91 | 38 | 3.0 | 8-25-10 | synthetic | CRYSTAL STRUCTURE OF THE C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI- GMP | S.A.STROBEL,K.D.SMITH | 3IRW 3MUV 3MXH 3MUM 3MUT Compare |
1WZ2 | FR3D | D | 176 | 66 | 3.2 | 9-06-05 | synthetic | THE CRYSTAL STRUCTURE OF LEUCYL-TRNA SYNTHETASE AND TRNA(LEUCINE) COMPLEX | R.FUKUNAGA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1DUH | FR3D | A | 88 | 38 | 2.7 | 5-08-00 | synthetic | CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA | L.JOVINE,T.HAINZL,C.OUBRIDGE,W.G.SCOTT,J.LI,T.K.SIXMA, A.WONACOTT,T.SKARZYNSKI,K.NAGAI | |
3OWZ | FR3D | AB | 168 | 79 | 3.0 | 12-29-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN IRIDIUM | L.HUANG,A.SERGANOV,D.J.PATEL | 3OXB 3OXJ 3OWW 3OXD 3OXM 3OWI 3OX0 3OXE Compare |
3A3A | FR3D | A | 86 | 34 | 3.1 | 8-11-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN SELENOCYSTINE TRNA | Y.ITOH,S.CHIBA,S.I.SEKINE,S.YOKOYAMA | 3HL2 Compare |
2HOJ | FR3D | A | 74 | 33 | 2.5 | 9-19-06 | synthetic | CRYSTAL STRUCTURE OF AN E. COLI THI-BOX RIBOSWITCH BOUND TO THIAMINE PYROPHOSPHATE, MANGANESE IONS | T.E.EDWARDS,A.R.FERRE-D'AMARE | 2HOP 2HOO 2HOL 2HOK 2HOM 3K0J Compare |
2ZZM | FR3D | B | 84 | 27 | 2.6 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNALEU | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
3AM1 | FR3D | B | 81 | 34 | 2.4 | 12-29-10 | synthetic | CRYSTAL STRUCTURE OF PROTEIN | Y.ARAISO,R.ISHITANI,O.NUREKI | |
2GDI | FR3D | XY | 156 | 74 | 2.0 | 7-04-06 | synthetic | CRYSTAL STRUCTURE OF THIAMINE PYROPHOSPHATE-SPECIFIC RIBOSWITCH IN COMPLEX WITH THIAMINE PYROPHOSPHATE | A.SERGANOV | |
2BTE | FR3D | BE | 156 | 69 | 2.9 | 9-15-05 | THERMUS THERMOPHILUS | THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE | S.CUSACK,M.TUKALO,A.YAREMCHUK,R.FUKUNAGA,S.YOKOYAMA | 2V0G 2BYT Compare |
1P5P | FR3D | A | 77 | 28 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN II (MINIMIZED AVERAGE STRUCTURE) | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | 1P5O Compare |
3D2V | FR3D | A | 154 | 71 | 2.0 | 7-01-08 | ARABIDOPSIS THALIANA | STRUCTURE OF THE EUKARYOTIC TPP-SPECIFIC RIBOSWITCH BOUND TO THE ANTIBACTERIAL COMPOUND PYRITHIAMINE PYROPHOSPHATE | S.THORE,C.FRICK,N.BAN | 2CKY 3D2X 3D2G Compare |
1J2B | FR3D | CD | 148 | 40 | 3.3 | 5-27-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE COMPLEXED WITH LAMBDA-FORM TRNA(VAL) | R.ISHITANI,O.NUREKI,N.NAMEKI,N.OKADA,S.NISHIMURA,S.YOKOYAMA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1H3E | FR3D | B | 77 | 31 | 2.9 | 10-27-02 | THERMUS THERMOPHILUS | TYROSYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH WILD-TYPE TRNATYR(GUA) AND WITH ATP AND TYROSINOL | S.CUSACK,A.YAREMCHUK,I.KRIKLIVYI,M.TUKALO | |
3A2K | FR3D | C | 154 | 52 | 3.6 | 10-20-09 | synthetic | CRYSTAL STRUCTURE OF TILS COMPLEXED WITH TRNA | K.NAKANISHI,L.BONNEFOND,R.ISHITANI,O.NUREKI | |
1I9V | FR3D | A | 73 | 29 | 2.6 | 6-04-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE ANALYSIS OF A TRNA-NEOMYCIN COMPLEX | N.E.MIKKELSEN,K.JOHANSSON,A.VIRTANEN,L.A.KIRSEBOM | 1EHZ 1ML5 1MJ1 1FCW 1TN2 6TNA 4TNA 1EVV 1OB5 1SZ1 1TRA 1TTT 4TRA 1OB2 1ZO3 1ZO1 Compare |
1EIY | FR3D | C | 76 | 27 | 3.3 | 3-06-00 | THERMUS THERMOPHILUS HB8 | THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE | Y.GOLDGUR,L.MOSYAK,L.RESHETNIKOVA,V.ANKILOVA,M.SAFRO | 2IY5 Compare |
2K4C | FR3D | A | 76 | 30 | SOLUTION NMR; SOLUTION SCATTERING | 12-09-08 | ESCHERICHIA COLI | TRNAPHE-BASED HOMOLOGY MODEL FOR TRNAVAL REFINED AGAINST BASE N-H RDCS IN TWO MEDIA AND SAXS DATA | A.GRISHAEV,J.YING,M.D.CANNY,A.PARDI,A.BAX | |
3IZY | FR3D | N | 76 | 4 | 10.8 | 3-23-11 | BOS TAURUS | MAMMALIAN MITOCHONDRIAL TRANSLATION INITIATION FACTOR 2 | A.S.YASSIN,E HAQUE,P.P DATTA,K ELMORE,N.K.BANAVALI,L.L.SPREMULLI, R.K.AGRAWAL | |
2NR0 | FR3D | E | 272 | 99 | 3.9 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
3DEG | FR3D | JK | 298 | 113 | 10.0 | 8-19-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP | S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI, K.H.NIERHAUS,C.M.T.SPAHN | 2FMT 3CW5 3CW6 Compare |
2CV1 | FR3D | D | 150 | 65 | 2.4 | 9-05-06 | synthetic | GLUTAMYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA(GLU), ATP, AND AN ANALOG OF L-GLUTAMATE: A QUATERNARY COMPLEX | S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2DXI 2CV2 1G59 1N77 1N78 2CV0 Compare |
2ZUE | FR3D | B | 75 | 29 | 2.0 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII ARGINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(ARG) AND AN ATP ANALOG (ANP) | M.KONNO,T.SUMIDA,E.UCHIKAWA,Y.MORI,T.YANAGISAWA,S.SEKINE, S.YOKOYAMA | 2ZUF Compare |
2CSX | FR3D | C | 75 | 28 | 2.7 | 9-20-05 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS METHIONYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(MET) | K.NAKANISHI,Y.OGISO,T.NAKAMA,S.FUKAI,O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 2CT8 Compare |
2IHX | FR3D | B | 1500 | 537 | SOLUTION NMR | 1-16-07 | ROUS SARCOMA VIRUS | SOLUTION STRUCTURE OF THE ROUS SARCOMA VIRUS NUCLEOCAPSID PROTEIN:UPSI RNA PACKAGING SIGNAL COMPLEX | J.ZHOU,M.SUMMERS | |
2AKE | FR3D | B | 72 | 21 | 3.1 | 7-11-06 | BOS TAURUS | STRUCTURE OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE IN COMPLEX WITH TRNA(TRP) | N.SHEN,L.GUO,B.YANG,Y.JIN,J.DING | 2DR2 Compare |
1QU2 | FR3D | T | 75 | 31 | 2.2 | 8-31-99 | STAPHYLOCOCCUS AUREUS | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | L.F.SILVIAN,J.WANG,T.A.STEITZ | 1QU3 1FFY Compare |
1GAX | FR3D | D | 150 | 60 | 2.9 | 12-06-00 | synthetic | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE | S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,J.TAO,D.G.VASSYLYEV, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | 1IVS Compare |
1O0C | FR3D | B | 74 | 31 | 2.7 | 4-15-03 | synthetic | CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE | T.L.BULLOCK,J.J.PERONA | 1EUQ 1EXD 1EUY 1QRS 1GTS 2RE8 1ZJW 1QRT 1QTQ 1QRU 1GTR 1O0B 2RD2 Compare |
1VBY | FR3D | B | 73 | 30 | 2.9 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE HEPATITIS DELTA VIRUS GEMONIC RIBOZYME PRECURSOR, WITH C75U MUTAION, AND MN2+ BOUND | A.KE,K.ZHOU,F.DING,J.H.D.CATE,J.A.DOUDNA | 1VC5 1VC6 1DRZ 1CX0 1SJ4 1SJ3 1VBX 1VC0 2OIH 1VBZ 2OJ3 1VC7 1SJF Compare |
1J1U | FR3D | B | 74 | 31 | 1.9 | 6-03-03 | synthetic | CRYSTAL STRUCTURE OF ARCHAEAL TYROSYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(TYR) AND L-TYROSINE | T.KOBAYASHI,O.NUREKI,R.ISHITANI,M.TUKALO,S.CUSACK, K.SAKAMOTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
2ZM5 | FR3D | C | 74 | 32 | 2.5 | 4-14-09 | ESCHERICHIA COLI K12 | CRYSTAL STRUCTURE OF TRNA MODIFICATION ENZYME MIAA IN THE COMPLEX WITH TRNA(PHE) | J.SAKAI,M.YAO,S.CHIMNARONK,I.TANAKA | 3FOZ 2ZXU Compare |
2DER | FR3D | D | 145 | 55 | 3.1 | 8-15-06 | synthetic | COCRYSTAL STRUCTURE OF AN RNA SULFURATION ENZYME MNMA AND TRNA-GLU IN THE INITIAL TRNA BINDING STATE | T.NUMATA,Y.IKEUCHI,S.FUKAI,T.SUZUKI,O.NUREKI | 2DET 2DEU Compare |
3AL0 | FR3D | E | 74 | 30 | 3.4 | 9-29-10 | synthetic | CRYSTAL STRUCTURE OF THE GLUTAMINE TRANSAMIDOSOME FROM THERMOTOGA MARITIMA IN THE GLUTAMYLATION STATE. | T.ITO,S.YOKOYAMA | 3AKZ Compare |
1U0B | FR3D | A | 74 | 30 | 2.3 | 11-23-04 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF CYSTEINYL-TRNA SYNTHETASE BINARY COMPLEX WITH TRNACYS | S.HAUENSTEIN,C.M.ZHANG,Y.M.HOU,J.J.PERONA | |
2D6F | FR3D | F | 146 | 50 | 3.1 | 7-11-06 | synthetic | CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN) | O.NUREKI | |
3L0U | FR3D | A | 73 | 30 | 3.0 | 3-16-10 | synthetic | THE CRYSTAL STRUCTURE OF UNMODIFIED TRNAPHE FROM ESCHERICHIA COLI | R.T.BYRNE,A.L.KONEVEGA,M.V.RODNINA,A.A.ANTSON | |
2AZX | FR3D | C | 144 | 60 | 2.8 | 8-01-06 | synthetic | CHARGED AND UNCHARGED TRNAS ADOPT DISTINCT CONFORMATIONS WHEN COMPLEXED WITH HUMAN TRYPTOPHANYL-TRNA SYNTHETASE | X.L.YANG,F.J.OTERO,K.L.EWALT,J.LIU,M.A.SWAIRJO,C.KOHRER, U.L.RAJBHANDARY,R.J.SKENE,D.E.MCREE,P.SCHIMMEL | |
2ZNI | FR3D | C | 144 | 52 | 3.1 | 12-30-08 | synthetic | CRYSTAL STRUCTURE OF PYRROLYSYL-TRNA SYNTHETASE-TRNA(PYL) COMPLEX FROM DESULFITOBACTERIUM HAFNIENSE | K.NOZAWA,Y.ARAISO,D.SOLL,R.ISHITANI,O.NUREKI | |
1Y26 | FR3D | X | 71 | 35 | 2.1 | 12-28-04 | VIBRIO VULNIFICUS | A-RIBOSWITCH-ADENINE COMPLEX | A.SERGANOV,Y.R.YUAN,D.J.PATEL | |
2DU3 | FR3D | D | 71 | 26 | 2.6 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE COMPLEXED WITH TRNACYS AND O-PHOSPHOSERINE | R.FUKUNAGA | 2DU4 2DU5 Compare |
3KFU | FR3D | K | 278 | 110 | 3.0 | 8-25-10 | THERMUS THERMOPHILUS | CRYSTAL STRUCTURE OF THE TRANSAMIDOSOME | M.BLAISE,M.BAILLY,M.FRECHIN,S.THIRUP,H.D.BECKER,D.KERN | |
2DU6 | FR3D | D | 71 | 18 | 3.3 | 3-13-07 | synthetic | CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS O-PHOSPHOSERYL- TRNA SYNTHETASE E418N/E420N MUTANT COMPLEXED WITH TRNAAMBER AND O-PHOSPHOSERINE ("AMBER COMPLEX") | R.FUKUNAGA | |
2L3J | FR3D | B | 1349 | 588 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | THE SOLUTION STRUCTURE OF THE ADAR2 DSRBM-RNA COMPLEX REVEALS A SEQUENCE-SPECIFIC READ OUT OF THE MINOR GROOVE | R.STEFL,F.C.OBERSTRASS,F.H.-T.ALLAIN | |
2ZZN | FR3D | C | 142 | 58 | 3.0 | 9-15-09 | synthetic | THE COMPLEX STRUCTURE OF ATRM5 AND TRNACYS | S.GOTO-ITO,T.ITO,S.YOKOYAMA | |
2OIU | FR3D | PQ | 142 | 62 | 2.6 | 3-13-07 | synthetic | L1 RIBOZYME LIGASE CIRCULAR ADDUCT | M.P ROBERTSON,W.G.SCOTT | |
3LA5 | FR3D | A | 71 | 35 | 1.7 | 1-26-10 | BACILLUS SUBTILIS | X-RAY CRYSTAL STRUCTURE OF MC6 RNA RIBOSWITCH BOUND TO AZACYTOSINE | M.S.DUNSTAN,D.LEYS | |
1KXK | FR3D | A | 70 | 28 | 3.0 | 3-22-02 | synthetic | CRYSTAL STRUCTURE OF A RNA MOLECULE CONTAINING DOMAIN 5 AND 6 OF THE YEAST AI5G GROUP II SELF-SPLICING INTRON | L.ZHANG,J.A.DOUDNA | |
3IVN | FR3D | A | 138 | 60 | 2.8 | 1-19-10 | BACILLUS SUBTILIS | STRUCTURE OF THE U65C MUTANT A-RIBOSWITCH APTAMER FROM THE BACILLUS SUBTILIS PBUE OPERON | V.DELFOSSE,P.DAGENAIS,D.CHAUSSE,G.DI TOMASSO,P.LEGAULT | |
3EPH | FR3D | E | 138 | 48 | 3.0 | 11-04-08 | synthetic | CRYSTALLOGRAPHIC SNAPSHOTS OF EUKARYOTIC DIMETHYLALLYLTRANSFERASE ACTING ON TRNA: INSIGHT INTO TRNA RECOGNITION AND REACTION MECHANISM | R.H.HUANG,C.ZHOU | 3EPJ 3EPL 3EPK Compare |
1QF6 | FR3D | B | 69 | 29 | 2.9 | 5-06-99 | ESCHERICHIA COLI | STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA | R.SANKARANARAYANAN,A.C.DOCK-BREGEON,B.REES,D.MORAS | |
3MOJ | FR3D | A | 69 | 26 | 2.9 | 8-04-10 | ESCHERICHIA COLI | STRUCTURE OF THE RNA BINDING DOMAIN OF THE BACILLUS SUBTILIS YXIN PROTEIN COMPLEXED WITH A FRAGMENT OF 23S RIBOSOMAL RNA | J.W.HARDIN,Y.HU,D.B.MCKAY | |
1GIX | FR3D | 1BC | 198 | 71 | 5.5 | 5-04-01 | THERMUS THERMOPHILUS,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIX, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY | M.M.YUSUPOV,G.Z.YUSUPOVA,A.BAUCOM,K.LIEBERMAN,T.N.EARNEST, J.H.D.CATE,H.F.NOLLER | 1JGQ 1JGO 1JGP Compare |
1EFW | FR3D | C | 126 | 50 | 3.0 | 6-19-00 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF ASPARTYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED TO TRNAASP FROM ESCHERICHIA COLI | C.BRIAND,A.POTERSZMAN,S.EILER,G.WEBSTER,J.-C.THIERRY,D.MORAS | 1C0A Compare |
2QUW | FR3D | AB | 67 | 25 | 2.2 | 7-15-08 | synthetic,synthetic | HAMMERHEAD RIBOZYME G12A MUTANT AFTER CLEAVAGE | Y.I.CHI,W.G.SCOTT,S.H.KIM | 2QUS Compare |
3HAY | FR3D | EF | 81 | 27 | 5.0 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND FULL H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1IL2 | FR3D | C | 129 | 56 | 2.6 | 9-28-01 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE:YEAST TRNAASP:ASPARTYL-ADENYLATE COMPLEX | L.MOULINIER,S.EILER,G.ERIANI,J.GANGLOFF,J.C.THIERRY, K.GABRIEL,W.H.MCCLAIN,D.MORAS | 1ASZ 1ASY Compare |
3FO4 | FR3D | A | 63 | 32 | 1.9 | 6-23-09 | synthetic | CRYSTAL STRUCTURE OF GUANINE RIBOSWITCH C74U MUTANT BOUND TO 6-CHLOROGUANINE | S.D.GILBERT,R.T.BATEY | 2XNZ 2B57 3GOG 2EES 2EEW 3FO6 1Y27 3DS7 2EET 3G4M 3GAO 2G9C 3GOT 3GES 2EEU 1U8D 2EEV 3GER Compare |
3BBV | FR3D | z | 67 | 21 | 10.0 | 10-21-08 | THERMUS THERMOPHILUS | THE TRNA(PHE) FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX | L.JIANG,J.P.ABRAHAMS | |
1B23 | FR3D | R | 66 | 23 | 2.6 | 12-07-98 | ESCHERICHIA COLI | E. COLI CYSTEINYL-TRNA AND T. AQUATICUS ELONGATION FACTOR EF-TU:GTP TERNARY COMPLEX | P.NISSEN,M.KJELDGAARD,S.THIRUP,J.NYBORG | |
2L1F | FR3D | AB | 2620 | 1069 | SOLUTION NMR | 10-27-10 | MOLONEY MURINE LEUKEMIA VIRUS,MOLONEY MURINE LEUKEMIA VIRUS | STRUCTURE OF A CONSERVED RETROVIRAL RNA PACKAGING ELEMENT BY NMR SPECTROSCOPY AND CRYO-ELECTRON TOMOGRAPHY | M.F.SUMMERS,R.N.IROBALIEVA,B.TOLBERT,A.SMALLS-MANTY,K.IYALLA, K.LOELIGER,V.D'SOUZA,H.KHANT,M.SCHMID,E.GARCIA,A.TELESNITSKY,W.CHIU, Y.MIYAZAKI | |
3R4F | FR3D | A | 66 | 23 | 3.5 | 4-20-11 | synthetic | PROHEAD RNA | F.DING,C.LU,W.ZHANO,K.R.RAJASHANKAR,D.L.ANDERSON,P.J.JARDINE, S.GRIMES,A.KE | |
2TRA | FR3D | A | 65 | 28 | 3.0 | 11-06-87 | SACCHAROMYCES CEREVISIAE | RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS | E.WESTHOF,P.DUMAS,D.MORAS | 3TRA Compare |
1H4S | FR3D | T | 65 | 26 | 2.9 | 6-18-01 | THERMUS THERMOPHILUS | PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE | A.YAREMCHUK,M.TUKALO,S.CUSACK | 1H4Q Compare |
2NQP | FR3D | F | 65 | 21 | 3.5 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
486D | FR3D | CD | 195 | 79 | 7.5 | 10-04-99 | THERMUS THERMOPHILUS,ESCHERICHIA COLI,SACCHAROMYCES CEREVISIAE,THERMUS THERMOPHILUS,THERMUS THERMOPHILUS,synthetic,synthetic | X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES | J.H.CATE,M.M.YUSUPOV,G.ZH.YUSUPOVA,T.N.EARNEST,H.F.NOLLER | |
3NKB | FR3D | AB | 70 | 31 | 1.9 | 9-01-10 | HOMO SAPIENS | A 1.9A CRYSTAL STRUCTURE OF THE HDV RIBOZYME PRECLEAVAGE SUGGESTS BOTH LEWIS ACID AND GENERAL ACID MECHANISMS CONTRIBUTE TO PHOSPHODIESTER CLEAVAGE | J.-H.CHEN,R.YAJIMA,D.M.CHADALAVADA,E.CHASE,P.C.BEVILACQUA,B.L.GOLDEN | |
3EGZ | FR3D | B | 64 | 20 | 2.2 | 10-28-08 | synthetic | CRYSTAL STRUCTURE OF AN IN VITRO EVOLVED TETRACYCLINE APTAMER AND ARTIFICIAL RIBOSWITCH | H.XIAO,T.E.EDWARDS,A.R.FERRE-D'AMARE | |
1YFG | FR3D | A | 64 | 23 | 3.0 | 9-03-97 | SACCHAROMYCES CEREVISIAE | YEAST INITIATOR TRNA | R.BASAVAPPA,P.B.SIGLER | |
2WWA | FR3D | DEFG | 140 | 45 | 8.9 | 12-08-09 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | CRYO-EM STRUCTURES OF IDLE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | 2WW9 Compare |
1F7V | FR3D | B | 60 | 22 | 2.9 | 6-27-01 | synthetic | CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG | B.DELAGOUTTE,D.MORAS,J.CAVARELLI | 1F7U Compare |
2WWB | FR3D | DEFG | 136 | 47 | 6.5 | 12-08-09 | TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM,TRITICUM AESTIVUM | CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME | T.BECKER,E.MANDON,S.BHUSHAN,A.JARASCH,J.P.ARMACHE,S.FUNES, F.JOSSINET,J.GUMBART,T.MIELKE,O.BERNINGHAUSEN,K.SCHULTEN, E.WESTHOF,R.GILMORE,R.BECKMANN | |
3ICQ | FR3D | E | 122 | 38 | 3.2 | 8-25-09 | synthetic | KARYOPHERIN NUCLEAR STATE | A.G.COOK,N.FUKUHARA,M.JINEK,E.CONTI | |
1FIR | FR3D | A | 61 | 22 | 3.3 | 1-17-01 | BOS TAURUS | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3) | P.BENAS,P.DUMAS | |
1UN6 | FR3D | F | 122 | 50 | 3.1 | 11-20-03 | XENOPUS LAEVIS | THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION | D.LU,M.A.SEARLES,A.KLUG | |
1SER | FR3D | T | 61 | 25 | 2.9 | 4-30-94 | THERMUS THERMOPHILUS | THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER | S.BIOU,V.CUSACK,A.YAREMCHUK,M.TUKALO | |
2CZJ | FR3D | B | 240 | 69 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TMRNA FROM THERMUS THERMOPHILUS HB8 | Y.BESSHO,R.SHIBATA,S.SEKINE,K.MURAYAMA,M.SHIROUZU, S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
3HJW | FR3D | DE | 70 | 30 | 2.4 | 6-23-09 | synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | 3LWR 3LWV 3LWQ 3LWP 3LWO Compare |
1QA6 | FR3D | C | 116 | 54 | 2.8 | 5-25-99 | synthetic | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | G.L.CONN,D.E.DRAPER,E.E.LATTMAN,A.G.GITTIS | 1Y39 1HC8 1C04 Compare |
1MMS | FR3D | C | 116 | 52 | 2.6 | 4-17-00 | synthetic | CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN L11-RNA COMPLEX | B.T.WIMBERLY,R.GUYMON,J.P.MCCUTCHEON,S.W.WHITE, V.RAMAKRISHNAN | 2JQ7 1OLN Compare |
3HAX | FR3D | EF | 71 | 31 | 2.1 | 6-23-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF A SUBSTRATE-BOUND GAR1-MINUS H/ACA RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
1F7Y | FR3D | B | 57 | 24 | 2.8 | 11-22-00 | synthetic | THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY | E.ENNIFAR,A.NIKOULINE,A.SERGANOV,S.TISHCHENKO,N.NEVSKAYA, M.GARBER,B.EHRESMANN,C.EHRESMANN,S.NIKONOV,P.DUMAS | 1DK1 1KUQ Compare |
2HVY | FR3D | E | 57 | 20 | 2.3 | 9-12-06 | synthetic | CRYSTAL STRUCTURE OF AN H/ACA BOX RNP FROM PYROCOCCUS FURIOSUS | K.YE | |
2DLC | FR3D | Y | 57 | 20 | 2.4 | 6-12-07 | SACCHAROMYCES CEREVISIAE | CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF YEAST TYROSYL- TRNA SYNTHETASE | M.TSUNODA,Y.KUSAKABE,N.TANAKA,K.T.NAKAMURA | |
2NRE | FR3D | F | 56 | 18 | 4.0 | 5-15-07 | synthetic | CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA | S.HUR,R.M.STROUD | |
2KZL | FR3D | A | 440 | 132 | SOLUTION NMR | 2-23-11 | BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 | SPECIFIER DOMAIN AND GA MOTIF REGION OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG | |
1MZP | FR3D | B | 55 | 25 | 2.6 | 1-21-03 | synthetic | STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME | A.NIKULIN,I.ELISEIKINA,S.TISHCHENKO,N.NEVSKAYA,N.DAVYDOVA, O.PLATONOVA,W.PIENDL,M.SELMER,A.LILJAS,R.ZIMMERMANN, M.GARBER,S.NIKONOV | |
1P5M | FR3D | A | 1210 | 416 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIA | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2HGH | FR3D | B | 1100 | 480 | SOLUTION NMR | 8-01-06 | XENOPUS LAEVIS | TRANSCRIPTION FACTOR IIIA ZINC FINGERS 4-6 BOUND TO 5S RRNA 55MER (NMR STRUCTURE) | B.M.LEE | |
2FK6 | FR3D | R | 53 | 20 | 2.9 | 3-21-06 | synthetic | CRYSTAL STRUCTURE OF RNASE Z/TRNA(THR) COMPLEX | I.LI DE LA SIERRA-GALLAY,N.MATHY,O.PELLEGRINI,C.CONDON | |
3E5C | FR3D | A | 52 | 21 | 2.2 | 10-07-08 | synthetic | CRYSTAL STRUCTURE OF THE SMK BOX (SAM-III) RIBOSWITCH WITH SAM | C.LU | 3E5E 3E5F Compare |
2QWY | FR3D | AB | 156 | 62 | 2.8 | 1-22-08 | synthetic | SAM-II RIBOSWITCH BOUND TO S-ADENOSYLMETHIONINE | S.D.GILBERT,R.P.RAMBO,D.VAN TYNE,R.T.BATEY | |
3NPN | FR3D | A | 50 | 18 | 2.8 | 10-06-10 | RALSTONIA SOLANACEARUM | STRUCTURE OF THE S-ADENOSYLHOMOCYSTEINE RIBOSWITCH AT 3.0A | F.E.REYES,A.E.EDWARDS,R.T.BATEY | 3NPQ Compare |
1RMN | FR3D | A | 49 | 19 | FLUORESCENCE TRANSFER | 1-26-95 | synthetic | A THREE-DIMENSIONAL MODEL FOR THE HAMMERHEAD RIBOZYME BASED ON FLUORESCENCE MEASUREMENTS | T.TUSCHL,C.GOHLKE,T.M.JOVIN,E.WESTHOF,F.ECKSTEIN | |
1E8O | FR3D | E | 49 | 18 | 3.2 | 11-08-00 | HOMO SAPIENS | CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP | O.WEICHENRIEDER,K.WILD,K.STRUB,S.CUSACK | |
1U63 | FR3D | B | 98 | 40 | 3.4 | 4-12-05 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX | N.NEVSKAYA,S.TISHCHENKO,A.GABDOULKHAKOV,E.NIKONOVA, O.NIKONOV,A.NIKULIN,M.GARBER,S.NIKONOV,W.PIENDL | |
2VPL | FR3D | B | 94 | 38 | 2.3 | 9-23-08 | METHANOCALDOCOCCUS JANNASCHII | THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII | V.KLJASHTORNY,S.TISHCHENKO,N.NEVSKAYA,S.NIKONOV,M.GARBER | |
2KUW | FR3D | A | 528 | 208 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (A-FORM MUTANT IN LOWER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | |
2KUU | FR3D | A | 576 | 230 | SOLUTION NMR | 5-19-10 | DROSOPHILA MELANOGASTER | SOLUTION STRUCTURE OF K10 TLS RNA (GC MUTANT IN UPPER HELIX) | S.L.BULLOCK,I.RINGEL,D.ISH-HOROWICZ,P.J.LUKAVSKY | 2KUR 2KUV 2KE6 Compare |
1YMO | FR3D | A | 940 | 417 | SOLUTION NMR | 3-15-05 | synthetic | SOLUTION STRUCTURE OF THE P2B-P3 PSEUDOKNOT FROM HUMAN TELOMERASE RNA | C.A.THEIMER,C.A.BLOIS,J.FEIGON | 2K96 2K95 Compare |
1S03 | FR3D | B | 94 | 42 | 2.7 | 5-25-04 | synthetic | THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX | H.J.MERIANOS,J.WANG,P.B.MOORE | |
3CIY | FR3D | CD | 92 | 46 | 3.4 | 5-06-08 | synthetic,MUS MUSCULUS | MOUSE TOLL-LIKE RECEPTOR 3 ECTODOMAIN COMPLEXED WITH DOUBLE- STRANDED RNA | L.LIU,I.BOTOS,Y.WANG,J.N.LEONARD,J.SHILOACH,D.M.SEGAL, D.R.DAVIES | |
1XJR | FR3D | A | 46 | 20 | 2.7 | 2-01-05 | synthetic | THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME | M.P.ROBERTSON,H.IGEL,R.BAERTSCH,D.HAUSSLER,M.ARES JR., W.G.SCOTT | |
3IAB | FR3D | R | 46 | 13 | 2.7 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF RNASE P /RNASE MRP PROTEINS POP6, POP7 IN A COMPLEX WITH THE P3 DOMAIN OF RNASE MRP RNA | A.PEREDERINA,O.A.ESAKOVA,C.QUAN,E.KHANOVA,A.S.KRASILNIKOV | |
2NUE | FR3D | C | 46 | 21 | 2.9 | 11-20-07 | synthetic | CRYSTAL STRUCTURE OF RNASE III FROM AQUIFEX AEOLICUS COMPLEXED WITH DS-RNA AT 2.9-ANGSTROM RESOLUTION | J.H.GAN,G.SHAW,J.E.TROPEA,D.S.WAUGH,D.L.COURT,X.JI | |
1Z2J | FR3D | A | 900 | 400 | SOLUTION NMR | 6-14-05 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING ELEMENT | D.W.STAPLE,S.E.BUTCHER | 2JUK 1ZC5 Compare |
1P6V | FR3D | B | 69 | 17 | 3.2 | 8-12-03 | synthetic | CRYSTAL STRUCTURE OF THE TRNA DOMAIN OF TRANSFER-MESSENGER RNA IN COMPLEX WITH SMPB | S.GUTMANN,P.W.HAEBEL,L.METZINGER,M.SUTTER,B.FELDEN,N.BAN | |
1QZW | FR3D | B | 180 | 44 | 4.1 | 11-18-03 | SULFOLOBUS SOLFATARICUS | CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION | K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING | |
1G1X | FR3D | DE | 84 | 32 | 2.6 | 10-30-00 | synthetic,synthetic | STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA | S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT,J.R.WILLIAMSON | |
1A60 | FR3D | A | 1056 | 312 | SOLUTION NMR | 5-27-98 | TURNIP YELLOW MOSAIC VIRUS | NMR STRUCTURE OF A CLASSICAL PSEUDOKNOT: INTERPLAY OF SINGLE-AND DOUBLE-STRANDED RNA, 24 STRUCTURES | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2ADT | FR3D | AB | 1720 | 921 | SOLUTION NMR | 7-26-05 | synthetic | NMR STRUCTURE OF A 30 KDA GAAA TETRALOOP-RECEPTOR COMPLEX. | J.H.DAVIS,M.TONELLI,L.G.SCOTT,L.JAEGER,J.R.WILLIAMSON, S.E.BUTCHER | 2I7Z 2JYF 2JYJ 2I7E 2JYH Compare |
2FEY | FR3D | A | 430 | 120 | SOLUTION NMR | 6-27-06 | synthetic | THE STRUCTURE OF STEM LOOP IV OF TETRAHYMENA TELOMERASE RNA | Y.CHEN,J.FENDER,J.D.LEGASSIE,M.B.JARSTFER,T.M.BRYAN,G.VARANI | |
1CQL | FR3D | A | 430 | 135 | SOLUTION NMR | 1-14-00 | ESCHERICHIA COLI | NMR STRUCTURE OF SRP RNA DOMAIN IV | U.SCHMITZ,T.L.JAMES | 1CQ5 Compare |
2L2J | FR3D | A | 840 | 373 | SOLUTION NMR | 10-27-10 | HOMO SAPIENS | SOLUTION NMR STRUCTURE OF THE LOWER PART OF THE R/G STEM LOOP RNA | F.F.OBERSTRASS,F.H.-T.ALLAIN,R.STEFL | 2L2K Compare |
2KX8 | FR3D | A | 42 | 17 | SOLUTION NMR | 9-08-10 | HOMO SAPIENS | NMR STRUCTURE OF STEM-LOOP 4 FROM THE HUMAN 7SK SNRNA IN COMPLEX WITH ARGININE | M.A.DURNEY,V.M.D'SOUZA | |
1MNX | FR3D | A | 546 | 214 | SOLUTION NMR | 1-14-03 | SPINACIA OLERACEA | THE SOLUTION STRUCTURE OF THE LOOP E REGION OF THE 5S RRNA FROM SPINACH CHLOROPLASTS. | P.VALLURUPALLI,P.B.MOORE | |
2OEU | FR3D | AB | 59 | 24 | 2.0 | 2-20-07 | synthetic,synthetic | FULL-LENGTH HAMMERHEAD RIBOZYME WITH MN(II) BOUND | M.MARTICK,W.G.SCOTT | 2GOZ Compare |
3BNT | FR3D | A | 42 | 18 | 2.3 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF [CO(NH3)6]CL3 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | |
1KH6 | FR3D | A | 42 | 16 | 2.9 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF AN RNA TERTIARY DOMAIN ESSENTIAL TO HCV IRES-MEDIATED TRANSLATION INITIATION. | J.S.KIEFT,K.ZHOU,A.GRECH,R JUBIN,J.A.DOUDNA | |
2AU4 | FR3D | A | 41 | 11 | SOLUTION NMR | 3-28-06 | synthetic | CLASS I GTP APTAMER | J.M.CAROTHERS,J.H.DAVIS,J.J.CHOU,J.W.SZOSTAK | |
1A51 | FR3D | A | 369 | 142 | SOLUTION NMR | 5-27-98 | ESCHERICHIA COLI | LOOP D/LOOP E ARM OF E. COLI 5S RRNA, NMR, 9 STRUCTURES | A.DALLAS,P.B.MOORE | 1A4D Compare |
2HUA | FR3D | A | 440 | 149 | SOLUTION NMR | 4-17-07 | synthetic | SOLUTION STRUCTURE OF CSFV IRES DOMAIN IIA | N.LOCKER,L.E.EASTON,P.J.LUKAVSKY | |
2D1B | FR3D | AB | 78 | 40 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2D1A | FR3D | AB | 78 | 38 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3P22 | FR3D | EFGH | 190 | 104 | 2.5 | 12-08-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, IN COMPLEX WITH A9 RNA | R.M.MITTON-FRY,S.J.DEGREGORIO,J.WANG,T.A.STEITZ,J.A.STEITZ | |
1YKV | FR3D | CD | 98 | 42 | 3.3 | 2-22-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE DIELS-ALDER RIBOZYME COMPLEXED WITH THE PRODUCT OF THE REACTION BETWEEN N-PENTYLMALEIMIDE AND COVALENTLY ATTACHED 9-HYDROXYMETHYLANTHRACENE | A.SERGANOV,S.KEIPER,L.MALININA,V.TERESHKO,E.SKRIPKIN, C.HOBARTNER,A.POLONSKAIA,A.T.PHAN,R.WOMBACHER,R.MICURA, Z.DAUTER,A.JASCHKE,D.J.PATEL | 1YLS 1YKQ Compare |
1B36 | FR3D | A | 380 | 106 | SOLUTION NMR | 12-23-98 | SYNTHETIC CONSTRUCT | SOLUTION STRUCTURE OF THE HAIRPIN RIBOZYME LOOP B DOMAIN RNA, NMR, 10 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
2KU0 | FR3D | A | 380 | 145 | SOLUTION NMR | 4-28-10 | HEPATITIS C VIRUS | INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN IIA RNA | R.B.PAULSEN,P.P.SETH,E.E.SWAYZE,R.H.GRIFFEY,J.J.SKALICKY,T.E.CHEATHAM III,D.R.DAVIS | |
1U3K | FR3D | A | 380 | 141 | SOLUTION NMR | 7-12-05 | synthetic | THE SOLUTION STRUCTURE OF A SUBSTRATE OF ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES | E.C.POLLOCK,P.B.MOORE | |
2A9L | FR3D | A | 38 | 14 | SOLUTION NMR | 6-17-98 | synthetic | SOLUTION NMR STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE- TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, MINIMIZED AVERAGE STRUCTURE | J.L.DIENER,P.B.MOORE | 1A9L Compare |
2HW8 | FR3D | B | 36 | 17 | 2.1 | 12-19-06 | synthetic | STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION. | S.TISHCHENKO,E.NIKONOVA,A.NIKULIN,N.NEVSKAYA,S.VOLCHKOV, W.PIENDL,M.GARBER,S.NIKONOV | 1ZHO Compare |
2ZY6 | FR3D | A | 38 | 12 | 1.8 | 6-30-09 | synthetic | CRYSTAL STRUCTURE OF A TRUNCATED TRNA, TPHE39A | I.TANAKA,M.YAO,Y.TANAKA,Y.KITAGO,S.YMAGATA | |
1M5L | FR3D | A | 570 | 227 | SOLUTION NMR | 9-18-02 | synthetic | STRUCTURE OF WILD-TYPE AND MUTANT INTERNAL LOOPS FROM THE SL-1 DOMAIN OF THE HIV-1 PACKAGING SIGNAL | J.GALLEGO,J.GREATOREX,G.VARANI,A.LEVER | |
2KTZ | FR3D | A | 380 | 140 | SOLUTION NMR | 4-28-10 | HEPATITIS C VIRUS | INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN IIA RNA | R.B.PAULSEN,P.P.SETH,E.E.SWAYZE,R.H.GRIFFEY,J.J.SKALICKY,T.E.CHEATHAM III,D.R.DAVIS | |
2KHY | FR3D | A | 380 | 92 | SOLUTION NMR | 2-16-10 | synthetic | SPECIFIER DOMAIN OF B. SUBTILIS TYRS T BOX LEADER RNA | J.WANG,T.M.HENKIN | |
1TXS | FR3D | A | 760 | 338 | SOLUTION NMR | 10-05-04 | synthetic | STEM-LOOP D OF THE CLOVERLEAF DOMAIN OF ENTEROVIRAL 5'UTR RNA | Z.DU,J.YU,N.B.ULYANOV,R.ANDINO,T.L.JAMES | |
1Q8N | FR3D | A | 950 | 345 | SOLUTION NMR | 3-23-04 | synthetic | SOLUTION STRUCTURE OF THE MALACHITE GREEN RNA BINDING APTAMER | J.FLINDERS,S.C.DEFINA,D.M.BRACKETT,C.BAUGH,C.WILSON, T.DIECKMANN | |
1D6K | FR3D | B | 740 | 275 | SOLUTION NMR | 11-22-99 | ESCHERICHIA COLI | NMR SOLUTION STRUCTURE OF THE 5S RRNA E-LOOP/L25 COMPLEX | M.STOLDT,J.WOHNERT,O.OHLENSCHLAGER,M.GORLACH,L.R.BROWN | |
1KOG | FR3D | J | 296 | 132 | 3.5 | 4-26-02 | synthetic | CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE INTERACTING WITH THE ESSENTIAL DOMAIN OF ITS MRNA OPERATOR | A.TORRES-LARRIOS,A.C.DOCK-BREGEON,P.ROMBY,B.REES, R.SANKARANARAYANAN,J.CAILLET,M.SPRINGER,C.EHRESMANN, B.EHRESMANN,D.MORAS | |
1I6U | FR3D | D | 74 | 37 | 2.6 | 8-03-01 | synthetic | RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII | S.TISHCHENKO,A.NIKULIN,N.FOMENKOVA,N.NEVSKAYA,O.NIKONOV, P.DUMAS,H.MOINE,B.EHRESMANN,C.EHRESMANN,W.PIENDL,V.LAMZIN, M.GARBER,S.NIKONOV | |
2P7E | FR3D | ABCDP | 60 | 28 | 2.0 | 5-22-07 | synthetic,synthetic,synthetic,synthetic | VANADATE AT THE ACTIVE SITE OF A SMALL RIBOZYME SUGGESTS A ROLE FOR WATER IN TRANSITION-STATE STABILIZATION | A.T.TORELLI,J.KRUCINSKA,J.E.WEDEKIND | 2D2L 1ZFX 3GS1 2OUE 2FGP 2P7F 2NPY 2BCY 1ZFV 3GS8 2P7D 1X9K 2D2K 1X9C 2NPZ 2BCZ 1ZFT 3GS5 Compare |
1E95 | FR3D | A | 540 | 174 | SOLUTION NMR | 8-23-01 | SIMIAN RETROVIRUS 1 | SOLUTION STRUCTURE OF THE PSEUDOKNOT OF SRV-1 RNA, INVOLVED IN RIBOSOMAL FRAMESHIFTING | P.J.A.MICHIELS,A.VERSLEYEN,C.W.A.PLEIJ,C.W.HILBERS,H.A.HEUS | |
1N8X | FR3D | A | 720 | 320 | SOLUTION NMR | 4-08-03 | synthetic | SOLUTION STRUCTURE OF HIV-1 STEM LOOP SL1 | D.C.LAWRENCE,C.C.STOVER,J.NOZNITSKY,Z.WU,M.F.SUMMERS | |
3FU2 | FR3D | A | 93 | 48 | 2.9 | 3-03-09 | synthetic | COCRYSTAL STRUCTURE OF A CLASS-I PREQ1 RIBOSWITCH | D.J.KLEIN,T.E.EDWARDS,A.R.FERRE-D'AMARE | 3K1V 2L1V Compare |
1RAW | FR3D | A | 360 | 104 | SOLUTION NMR | 1-27-97 | synthetic | ATP BINDING RNA APTAMER IN COMPLEX WITH AMP, NMR, 10 STRUCTURES | T.DIECKMANN,J.FEIGON | |
2TPK | FR3D | A | 36 | 13 | SOLUTION NMR | 11-04-98 | synthetic | AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS | J.A.HOLLAND,M.R.HANSEN,Z.DU,D.W.HOFFMAN | |
2FDT | FR3D | A | 396 | 164 | SOLUTION NMR | 12-05-06 | synthetic | SOLUTION STRUCTURE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2 | Y.NOMURA,S.BABA,S.NAKAZATO,T.SAKAMOTO,M.KAJIKAWA,N.OKADA, G.KAWAI | |
1KFO | FR3D | A | 36 | 16 | 1.6 | 12-07-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA HELIX RECOGNIZED BY A ZINC- FINGER PROTEIN: AN 18 BASE PAIR DUPLEX AT 1.6 RESOLUTION | S.LIMA,J.HILDENBRAND,A.KOROSTELEV,S.HATTMAN,H.LI | |
2PCV | FR3D | A | 350 | 68 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
2DR8 | FR3D | B | 33 | 13 | 2.5 | 11-14-06 | synthetic | COMPLEX STRUCTURE OF CCA-ADDING ENZYME WITH TRNAMINIDC AND CTP | K.TOMITA,R.ISHITANI,S.FUKAI,O.NUREKI | 2DR5 2ZH1 2ZH7 2DR7 2ZHA 2ZH9 2ZH3 2ZH2 2ZH6 2ZH5 2DVI 2DR9 2ZH4 2ZHB 2ZH8 2DRA 2DRB Compare |
2GM0 | FR3D | AB | 700 | 266 | SOLUTION NMR | 4-25-06 | synthetic | LINEAR DIMER OF STEMLOOP SL1 FROM HIV-1 | N.B.ULYANOV,A.MUJEEB,Z.DU,M.TONELLI,T.G.PARSLOW,T.L.JAMES | |
2XD0 | FR3D | V | 35 | 13 | 3.0 | 1-12-11 | synthetic | A PROCESSED NON-CODING RNA REGULATES A BACTERIAL ANTIVIRAL SYSTEM | T.R.BLOWER,X.Y.PEI,F.L.SHORT,P.C.FINERAN,D.P.HUMPHREYS,B.F.LUISI, G.P.C.SALMOND | 2XDD 2XDB Compare |
1ULL | FR3D | A | 245 | 100 | SOLUTION NMR | 8-20-97 | synthetic | RNA APTAMER COMPLEXED WITH HIV-1 REV PEPTIDE, NMR, 7 STRUCTURES | X.YE,A.GORIN,A.D.ELLINGTON,D.J.PATEL | |
3OUY | FR3D | C | 70 | 22 | 2.7 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE AT POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | |
3OVA | FR3D | C | 34 | 13 | 2.0 | 12-01-10 | synthetic | HOW THE CCA-ADDING ENZYME SELECTS ADENINE OVER CYTOSINE IN POSITION 76 OF TRNA | B.C.PAN,Y.XIONG,T.A.STEITZ | 3OV7 3OVS 3OVB Compare |
1ET4 | FR3D | AB | 175 | 75 | 2.3 | 11-13-00 | synthetic | CRYSTAL STRUCTURE OF A VITAMIN B12 BINDING RNA APTAMER WITH LIGAND AT 2.3 A | D.SUSSMAN,C.WILSON | 1DDY Compare |
2PCW | FR3D | AB | 833 | 274 | SOLUTION NMR | 5-08-07 | synthetic,synthetic | SOLUTION STRUCTURE OF AN RRNA SUBSTRATE BOUND TO THE PSEUDOURIDYLATION POCKET OF A BOX H/ACA SNORNA | H.JIN,J.P.LORIA,P.B.MOORE | |
3PLA | FR3D | GHIJ | 87 | 35 | 3.1 | 1-26-11 | synthetic,synthetic | CRYSTAL STRUCTURE OF A CATALYTICALLY ACTIVE SUBSTRATE-BOUND BOX C/D RNP FROM SULFOLOBUS SOLFATARICUS | J.LIN,S.LAI,R.JIA,A.XU,L.ZHANG,J.LU,K.YE | |
2L3E | FR3D | A | 700 | 260 | SOLUTION NMR | 11-17-10 | synthetic | SOLUTION STRUCTURE OF P2A-J2A/B-P2B OF HUMAN TELOMERASE RNA | Q.ZHANG,N.KIM,R.D.PETERSON,Z.WANG,J.FEIGON | |
1FMN | FR3D | A | 175 | 71 | SOLUTION NMR | 7-11-96 | synthetic | SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES | P.FAN,A.K.SURI,R.FIALA,D.LIVE,D.J.PATEL | |
2P89 | FR3D | AB | 960 | 433 | SOLUTION NMR | 4-03-07 | synthetic,synthetic | SOLUTION STRUCTURE OF THE 3' PSEUDOURIDYATION POCKET OF U65 SNORNA WITH BOUND SUBSTRATE | H.WU,J.FEIGON | |
2L3C | FR3D | B | 680 | 280 | SOLUTION NMR | 10-27-10 | RATTUS NORVEGICUS | SOLUTION STRUCTURE OF ADAR2 DSRBM1 BOUND TO LSL RNA | F.ALLAIN,R.STEFL,F.OBERSTRASS | |
1ETF | FR3D | A | 34 | 14 | SOLUTION NMR | 3-12-97 | synthetic | REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, MINIMIZED AVERAGE STRUCTURE | J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY, A.D.FRANKEL,J.R.WILLAMSON | 1ETG 1I9F Compare |
1R2P | FR3D | A | 340 | 132 | SOLUTION NMR | 2-03-04 | synthetic | SOLUTION STRUCTURE OF DOMAIN 5 FROM THE AI5(GAMMA) GROUP II INTRON | R.K.O.SIGEL,D.G.SASHITAL,D.L.ABRAMOVITZ,A.G.PALMER III, S.E.BUTCHER,A.M.PYLE | |
1R7W | FR3D | A | 680 | 227 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUCCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUCCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
1R7Z | FR3D | A | 680 | 209 | SOLUTION NMR | 5-25-04 | synthetic | NMR STRUCTURE OF THE R(GGAGGACAUUCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUUCCU BULGE | Z.DU,N.B.ULYANOV,J.YU,T.L.JAMES | |
1HMH | FR3D | AC | 102 | 30 | 2.6 | 12-07-95 | engineered | THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME | H.W.PLEY,K.M.FLAHERTY,D.B.MCKAY | |
1P5N | FR3D | A | 680 | 253 | SOLUTION NMR | 11-04-03 | synthetic | SOLUTION STRUCTURE OF HCV IRES DOMAIN IIB | P.J.LUKAVSKY,I.KIM,G.A.OTTO,J.D.PUGLISI | |
2EUY | FR3D | A | 510 | 181 | SOLUTION NMR | 1-03-06 | synthetic | SOLUTION STRUCTURE OF THE INTERNAL LOOP OF HUMAN U65 H/ACA SNORNA 3' HAIRPIN | J.FEIGON,M.KHANNA,H.WU,C.JOHANSSON,M.CAIZERGUES-FERRER | |
1NBK | FR3D | A | 34 | 14 | SOLUTION NMR | 12-03-03 | synthetic | THE STRUCTURE OF RNA APTAMER FOR HIV TAT COMPLEXED WITH TWO ARGININAMIDE MOLECULES | A.MATSUGAMI,S.KOBAYASHI,K.OUHASHI,S.UESUGI,R.YAMAMOTO, K.TAIRA,S.NISHIKAWA,P.K.R.KUMAR,M.KATAHIRA | |
1RNK | FR3D | A | 34 | 12 | SOLUTION NMR | 2-27-95 | synthetic | THE STRUCTURE OF AN RNA PSEUDOKNOT THAT CAUSES EFFICIENT FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS | L.X.SHEN,I.TINOCO JUNIOR | |
1MJI | FR3D | C | 68 | 28 | 2.5 | 1-21-03 | ESCHERICHIA COLI | DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX | A.PEREDERINA,N.NEVSKAYA,O.NIKONOV,A.NIKULIN,P.DUMAS,M.YAO, I.TANAKA,M.GARBER,G.GONGADZE,S.NIKONOV | |
2JTP | FR3D | A | 680 | 273 | SOLUTION NMR | 10-02-07 | synthetic | SOLUTION STRUCTURE OF THE FRAMESHIFT-INDUCING RNA STEM-LOOP IN SIV | R.J.MARCHESCHI,D.W.STAPLE,S.E.BUTCHER | |
2KPV | FR3D | A | 340 | 128 | SOLUTION NMR | 8-04-10 | synthetic | NMR MODEL OF THE FIRST LET-7 MIRNA COMPLEMENTARY SITE (LCS1) IN 3'-UTR OF LIN-41 MRNA FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
1T28 | FR3D | A | 34 | 7 | SOLUTION NMR | 8-10-04 | synthetic | HIGH RESOLUTION STRUCTURE OF A PICORNAVIRAL INTERNAL CIS- ACTING REPLICATION ELEMENT | V.THIVIYANATHAN,Y.YANG,K.KALUARACHCHI,R.REYNBRAND, D.G.GORENSTEIN,S.M.LEMON | |
2F88 | FR3D | A | 340 | 140 | SOLUTION NMR | 2-28-06 | synthetic | SOLUTION NMR STRUCTURE OF DOMAIN 5 FROM THE PYAIELLA LITTORALIS (PL) GROUP II INTRON | K.T.DAYIE | |
1EXY | FR3D | A | 396 | 164 | SOLUTION NMR | 5-15-00 | synthetic | SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET | F.JIANG,A.GORIN,W.HU,A.MAJUMDAR,S.BASKERVILLE,W.XU, A.ELLINGTON,D.J.PATEL | |
1O15 | FR3D | A | 33 | 12 | SOLUTION NMR | 2-18-03 | synthetic | THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS | G.M.CLORE,J.KUSZEWSKI | 1EHT Compare |
2JXV | FR3D | A | 330 | 126 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF A LET-7 MIRNA:LIN-41 MRNA COMPLEX FROM C. ELEGANS | M.CEVEC,C.THIBAUDEAU,J.PLAVEC | |
1E7K | FR3D | D | 34 | 14 | 2.9 | 2-19-01 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL 15.5KD PROTEIN BOUND TO A U4 SNRNA FRAGMENT | I.VIDOVIC,S.NOTTROTT,K.HARTHMUTH,R.LUHRMANN,R.FICNER | 2OZB Compare |
1F1T | FR3D | A | 33 | 14 | 2.8 | 9-04-00 | synthetic | CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | C.BAUGH,D.GRATE,C.WILSON | |
3GCA | FR3D | A | 33 | 15 | 2.8 | 3-03-09 | synthetic | THE STRUCTURAL BASIS FOR RECOGNITION OF THE PREQ0 METABOLITE BY AN UNUSUALLY SMALL RIBOSWITCH APTAMER DOMAIN | R.C.SPITALE,J.E.WEDEKIND | |
1G70 | FR3D | A | 448 | 170 | SOLUTION NMR | 2-07-01 | HUMAN IMMUNODEFICIENCY VIRUS 1 | COMPLEX OF HIV-1 RRE-IIB RNA WITH RSG-1.2 PEPTIDE | Y.GOSSER,T.HERMANN,A.MAJUMDAR,W.HU,R.FREDERICK,F.JIANG,W.XU, D.J.PATEL | |
1Z31 | FR3D | A | 320 | 110 | SOLUTION NMR | 3-22-05 | synthetic | THE STRUCTURE OF AN ENZYME-ACTIVATING FRAGMENT OF HUMAN TELOMERASE RNA | T.C.LEEPER,G.VARANI | |
2KF0 | FR3D | A | 240 | 96 | SOLUTION NMR | 7-21-09 | synthetic | NMR STRUCTURE OF U6 ISL AT PH 7.0 | V.VENDITTI,S.E.BUTCHER | 1XHP Compare |
2Q1R | FR3D | A | 24 | 12 | 1.1 | 10-30-07 | engineered | CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH. | F.LI,P.S.PALLAN | 2E2I 1DI2 404D 2NVQ 2JA8 2E2H 1OO7 2YU9 2JXQ 1JB8 1RC7 1A34 1PJG 3HOY 1EFO 2JA7 2VUM 3HOV 2NVT 1RRR 2R7Z 2KP4 3I4N 1R9S 1SFO 1PJO 1Y1W 2JA6 2R92 3HOX 1RRD 1G4Q 1FIX 3ADL 2NVZ 3I4M 219D 1R9T 2NVX 2KP3 3M4O 1DRR 1Y77 2JA5 2NUG 3HOW 2KXZ 3GTM 2Q1O 3HOU 2KY0 3HOZ 2KY1 3GTQ 2G92 3NCU 3M3Y 2JXS 3GTJ 1YYW 3BSU 3GTL 1CX5 353D 1YYO 205D 1YYK 157D 1AC3 3GTG 280D 1AL5 3GTO 1ZBI 3CGS 3CGP 3CGR 3GTP 3CGQ 3LRN 3OG8 2QKK 1RNA 1YZD 1Z79 2H1M 397D 1YY0 405D 2QK9 2QKB 17RA 1ZBL 1Z7F Compare |
1KAJ | FR3D | A | 32 | 9 | SOLUTION NMR | 7-11-96 | synthetic | CONFORMATION OF AN RNA PSEUDOKNOT FROM MOUSE MAMMARY TUMOR VIRUS, NMR, 1 STRUCTURE | H.KANG,J.V.HINES,I.TINOCO JUNIOR | |
3BO0 | FR3D | DEFG | 105 | 32 | 9.6 | 12-09-08 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | RIBOSOME-SECY COMPLEX | C.W.AKEY,J.F.MENETRET | 3BO1 Compare |
3CZW | FR3D | X | 28 | 14 | 1.4 | 9-09-08 | synthetic | X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX | W.RYPNIEWSKI,D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK | 3D0M Compare |
3ID5 | FR3D | D | 64 | 16 | 4.0 | 8-25-09 | synthetic | CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS C/D RNP ASSEMBLED WITH NOP5, FIBRILLARIN, L7AE AND A SPLIT HALF C/D RNA | K.YE | |
3DKN | FR3D | DEF | 69 | 30 | 8.7 | 8-19-08 | CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS,CANIS LUPUS FAMILIARIS | SEC61 IN THE CANINE RIBOSOME-CHANNEL COMPLEX FROM THE ENDOPLASMIC RETICULUM | J.-F.MENETRET,C.AKEY | |
1KPD | FR3D | A | 32 | 10 | SOLUTION NMR | 4-01-97 | synthetic | A MUTANT RNA PSEUDOKNOT THAT PROMOTES RIBOSOMAL FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE | H.KANG,I.TINOCO JUNIOR | |
1T4L | FR3D | A | 480 | 210 | SOLUTION NMR | 6-01-04 | synthetic | SOLUTION STRUCTURE OF DOUBLE-STRANDED RNA BINDING DOMAIN OF S. CEREVISIAE RNASE III (RNT1P) IN COMPLEX WITH THE 5' TERMINAL RNA HAIRPIN OF SNR47 PRECURSOR | H.WU,A.HENRAS,G.CHANFREAU,J.FEIGON | |
1MFY | FR3D | A | 496 | 126 | SOLUTION NMR | 9-18-02 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER | M.-K.LEE,S.-H.BAE,C.-J.PARK,H.-K.CHEONG,C.CHEONG,B.-S.CHOI | |
1LVJ | FR3D | A | 372 | 134 | SOLUTION NMR | 12-11-02 | HUMAN IMMUNODEFICIENCY VIRUS 1 | STRUCTURE OF TAR RNA COMPLEXED WITH A TAT-TAR INTERACTION NANOMOLAR INHIBITOR THAT WAS IDENTIFIED BY COMPUTATIONAL SCREENING | Z.DU,K.E.LIND,T.L.JAMES | |
1YLG | FR3D | A | 620 | 227 | SOLUTION NMR | 2-01-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1YNE | FR3D | A | 620 | 219 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JBR | FR3D | CF | 61 | 26 | 2.1 | 10-26-01 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31- MER SRD RNA INHIBITOR | X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL | 1JBS 1JBT Compare |
1YNG | FR3D | A | 496 | 163 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1JO7 | FR3D | A | 992 | 289 | SOLUTION NMR | 9-19-01 | synthetic | SOLUTION STRUCTURE OF INFLUENZA A VIRUS PROMOTER | S.-H.BAE,H.-K.CHEONG,J.-H.LEE,C.CHEONG,M.KAINOSHO,B.-S.CHOI | |
1VFG | FR3D | C | 31 | 8 | 2.8 | 8-10-04 | synthetic | CRYSTAL STRUCTURE OF TRNA NUCLEOTIDYLTRANSFERASE COMPLEXED WITH A PRIMER TRNA AND AN INCOMING ATP ANALOG | K.TOMITA,S.FUKAI,R.ISHITANI,T.UEDA,N.TAKEUCHI,D.G.VASSYLYEV, O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
1YNC | FR3D | A | 620 | 210 | SOLUTION NMR | 2-08-05 | synthetic | NMR STRUCTURE OF THE APOB MRNA STEM-LOOP AND ITS INTERACTION WITH THE C TO U EDITING APOBEC1 COMPLEMENTARY FACTOR | C.MARIS,J.MASSE,F.H.ALLAIN,A.CHESTER,N.NAVARATNAM | |
1EBR | FR3D | A | 150 | 61 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1LDZ | FR3D | A | 750 | 253 | SOLUTION NMR | 11-25-98 | synthetic | SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, 25 STRUCTURES | C.G.HOOGSTRATEN,P.LEGAULT,A.PARDI | 2LDZ Compare |
1NA2 | FR3D | A | 540 | 198 | SOLUTION NMR | 1-21-03 | synthetic | SOLUTION STRUCTURE OF THE P2B HAIRPIN FROM HUMAN TELOMERASE RNA | C.A.THEIMER,L.D.FINGER,L.TRANTIREK,J.FEIGON | |
1AJU | FR3D | A | 600 | 229 | SOLUTION NMR | 12-17-97 | synthetic | HIV-2 TAR-ARGININAMIDE COMPLEX, NMR, 20 STRUCTURES | A.S.BRODSKY,J.R.WILLIAMSON | |
1AUD | FR3D | B | 930 | 213 | SOLUTION NMR | 2-25-98 | synthetic | U1A-UTRRNA, NMR, 31 STRUCTURES | F.H.-T.ALLAIN,C.C.GUBSER,P.W.A.HOWE,K.NAGAI,D.NEUHAUS, G.VARANI | |
364D | FR3D | ABC | 59 | 24 | 3.0 | 1-02-98 | ESCHERICHIA COLI,ESCHERICHIA COLI,ESCHERICHIA COLI | .0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | 357D Compare |
1EKZ | FR3D | B | 1080 | 459 | SOLUTION NMR | 8-21-00 | DROSOPHILA MELANOGASTER | NMR STRUCTURE OF THE COMPLEX BETWEEN THE THIRD DSRBD FROM DROSOPHILA STAUFEN AND A RNA HAIRPIN | A.RAMOS,S.GRUNERT,M.BYCROFT,D.ST JOHNSTON,G.VARANI | |
1HVU | FR3D | C | 120 | 36 | 4.8 | 1-13-99 | synthetic | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT | J.JAEGER,T.RESTLE,T.A.STEITZ | |
2IPY | FR3D | D | 60 | 24 | 2.8 | 1-09-07 | synthetic | CRYSTAL STRUCTURE OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH FERRITIN H IRE-RNA | W.E.WALDEN,A.I.SELEZNEVA,J.DUPUY,A.VOLBEDA,J.C.FONTECILLA- CAMPS,E.C.THEIL,K.VOLZ | |
1RFR | FR3D | A | 600 | 259 | SOLUTION NMR | 3-23-04 | HUMAN COXSACKIEVIRUS B3 | NMR STRUCTURE OF THE 30MER STEMLOOP-D OF COXSACKIEVIRAL RNA | O.OHLENSCHLAGER,J.WOHNERT,E.BUCCI,S.SEITZ,S.HAFNER, R.RAMACHANDRAN,R.ZELL,M.GORLACH | |
1HWQ | FR3D | A | 600 | 220 | SOLUTION NMR | 5-16-01 | synthetic | SOLUTION STRUCTURE OF THE VS RIBOZYME SUBSTRATE STEM-LOOP | J.C.FLINDERS,T.DIECKMANN | |
1KP7 | FR3D | A | 30 | 10 | SOLUTION NMR | 4-10-02 | synthetic | CONSERVED RNA STRUCTURE WITHIN THE HCV IRES EIF3 BINDING SITE | J.GALLEGO,R.KLINCK,A.J.COLLIER,P.T.COLE,S.J.HARRIS, G.P.HARRISON,F.ABOUL-ELA,S.WALKER,G.VARANI | |
1AKX | FR3D | A | 30 | 12 | SOLUTION NMR | 11-19-97 | synthetic | HIV-2 TRANS ACTIVATING REGION RNA COMPLEX WITH ARGININAMIDE, NMR, MINIMIZED AVERAGE STRUCTURE | A.S.BRODSKY,J.R.WILLIAMSON | |
2BH2 | FR3D | C | 58 | 10 | 2.1 | 3-30-05 | ESCHERICHIA COLI | CRYSTAL STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE RUMA IN COMPLEX WITH RIBOSOMAL RNA SUBSTRATE AND S-ADENOSYLHOMOCYSTEINE. | T.T.LEE,S.AGARWALLA,R.M.STROUD | |
2K64 | FR3D | AB | 720 | 320 | SOLUTION NMR | 7-14-09 | synthetic,synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING EBS1 TOGETHER WITH IBS1 OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1JID | FR3D | B | 26 | 10 | 1.8 | 10-19-01 | synthetic | HUMAN SRP19 IN COMPLEX WITH HELIX 6 OF HUMAN SRP RNA | K.WILD,I.SINNING,S.CUSACK | 1L1W Compare |
3B5F | FR3D | ABC | 60 | 29 | 2.7 | 8-12-08 | synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A MINIMALLY HINGED HAIRPIN RIBOZYME INCORPORATING THE ADE38DAP MUTATION AND A 2',5' PHOSPHODIESTER LINKAGE AT THE ACTIVE SITE | C.MACELREVEY,J.KRUCINSKA,J.E.WEDEKIND | 3I2S 3I2R 3I2Q 3I2U 3B5S 3BBI 3B91 3CQS 3B5A 3CR1 3B58 3BBK 3BBM Compare |
1UUD | FR3D | B | 29 | 10 | SOLUTION NMR | 3-15-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 (CLONE | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT203, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
3B31 | FR3D | AB | 43 | 16 | 2.4 | 12-25-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF DOMAIN III OF THE CRICKET PARALYSIS VIRUS IRES RNA | J.S.KIEFT,D.A.COSTANTINO,J.S.PFINGSTEN,R.P.RAMBO | 3MJA 3MJ3 3MJB Compare |
2GIP | FR3D | A | 560 | 260 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF A PORTION OF THE 5'UTR OF HSPA MRNA FROM BRADYRHIZOBIUM JANPONICUM HAVING DELETED G83 | S.CHOWDHURY,C.MARIS,F.H.ALLAIN,F.NARBERHAUS | 2GIO Compare |
2KDQ | FR3D | B | 290 | 108 | SOLUTION NMR | 6-23-09 | synthetic | SIMULTANEOUS RECOGNITION OF HIV-1 TAR RNA BULGE AND LOOP SEQUENCES BY CYCLIC PEPTIDE MIMIC OF TAT PROTEIN | A.DAVIDSON,T.C.LEEPER,G.VARANI | |
2K63 | FR3D | A | 580 | 193 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN INCLUDING THE EXON BINDING SITE 1 (EBS1) OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
1EBS | FR3D | A | 145 | 62 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1UUI | FR3D | B | 29 | 11 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT158, BOUND TO HIV-1 TAR RNA | B.DAVIS,M.AFSHAR,G.VARANI,J.KARN,A.I.H.MURCHIE,G.LENTZEN, M.J.DRYSDALE,A.J.POTTER,J.BOWER,F.ABOUL-ELA | |
1NBR | FR3D | A | 435 | 168 | SOLUTION NMR | 3-04-03 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | S.A.MCCALLUM,A.PARDI | |
2K5Z | FR3D | A | 290 | 111 | SOLUTION NMR | 7-14-09 | synthetic | SOLUTION STRUCTURE AND DYNAMICS OF THE APICAL STEM-LOOP OF DUCK HEPATITIS B VIRUS | K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
1UTS | FR3D | B | 464 | 150 | SOLUTION NMR | 2-12-04 | HUMAN IMMUNODEFICIENCY VIRUS 1 | DESIGNED HIV-1 TAR BINDING LIGAND | B.DAVIS,A.I.H.MURCHIE,F.ABOUL-ELA,J.KARN | |
2L8H | FR3D | A | 290 | 102 | SOLUTION NMR | 3-23-11 | synthetic | CHEMICAL PROBE BOUND TO HIV TAR RNA | A.DAVIDSON,D.BEGLEY,C.LAU,G.VARANI | |
1ARJ | FR3D | N | 580 | 174 | SOLUTION NMR | 11-08-96 | synthetic | ARG-BOUND TAR RNA, NMR | F.ABOUL-ELA,G.VARANI,J.KARN | |
1ANR | FR3D | A | 580 | 151 | SOLUTION NMR | 1-11-97 | synthetic | CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES | F.ABOUL-ELA,G.VARANI,J.KARN | |
1SCL | FR3D | A | 174 | 61 | SOLUTION NMR | 1-26-95 | RATTUS NORVEGICUS | THE SARCIN-RICIN LOOP, A MODULAR RNA | A.A.SZEWCZAK,P.B.MOORE | |
2KX5 | FR3D | A | 290 | 110 | SOLUTION NMR | 7-07-10 | synthetic | RECOGNITION OF HIV TAR RNA BY PEPTIDE MIMETIC OF TAT PROTEIN | A.DAVIDSON,K.PATORA-KOMISARSKA,J.ROBINSON,G.VARANI | |
1L1C | FR3D | C | 29 | 12 | SOLUTION NMR | 3-27-02 | BACILLUS SUBTILIS | STRUCTURE OF THE LICT BACTERIAL ANTITERMINATOR PROTEIN IN COMPLEX WITH ITS RNA TARGET | Y.YANG,N.DECLERCK,X.MANIVAL,S.AYMERICH,M.KOCHOYAN | |
1FQZ | FR3D | A | 27 | 12 | SOLUTION NMR | 1-17-01 | synthetic | NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE | R.KLINCK,E.WESTHOF,S.WALKER,M.AFSHAR,A.COLLIER,F.ABOUL-ELA | 1F84 Compare |
1EBQ | FR3D | A | 145 | 65 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES | R.D.PETERSON,J.FEIGON | |
1QD3 | FR3D | A | 493 | 163 | SOLUTION NMR | 7-12-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | HIV-1 TAR RNA/NEOMYCIN B COMPLEX | C.FABER,H.STICHT,P.ROESCH | |
1OOA | FR3D | D | 58 | 18 | 2.5 | 7-22-03 | synthetic | CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH- AFFINITY RNA APTAMER | D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III, G.GHOSH | |
2JWV | FR3D | A | 290 | 100 | SOLUTION NMR | 1-08-08 | synthetic | STRUCTURE OF A HIGH AFFINITY ANTI-NFKB RNA APTAMER | N.J.REITER,L.MAHER III,S.E.BUTCHER | |
1AQO | FR3D | A | 435 | 148 | SOLUTION NMR | 2-04-98 | synthetic | IRON RESPONSIVE ELEMENT RNA HAIRPIN, NMR, 15 STRUCTURES | K.J.ADDESS,A.PARDI | |
28SR | FR3D | A | 28 | 11 | SOLUTION NMR | 4-20-99 | ESCHERICHIA COLI | NMR STRUCTURE OF THE MOST CONSERVED RNA MOTIF IN SRP RNA | U.SCHMITZ,T.L.JAMES,P.LUKAVSKY,P.WALTER | 28SP Compare |
1ZBN | FR3D | A | 280 | 95 | SOLUTION NMR | 4-19-05 | synthetic | SOLUTION STRUCTURE OF BIV TAR HAIRPIN COMPLEXED TO JDV TAT ARGININE-RICH MOTIF | V.CALABRO,M.D.DAUGHERTY,A.D.FRANKEL | |
1MNB | FR3D | B | 28 | 12 | SOLUTION NMR | 1-27-97 | synthetic | BIV TAT PEPTIDE (RESIDUES 68-81), NMR, MINIMIZED AVERAGE STRUCTURE | J.D.PUGLISI,L.CHEN,S.BLANCHARD,A.D.FRANKEL | |
1Q96 | FR3D | AC | 81 | 37 | 1.8 | 11-25-03 | synthetic | CRYSTAL STRUCTURE OF A MUTANT OF THE SARCIN/RICIN DOMAIN FROM RAT 28S RRNA | C.C.CORRELL,J.BENEKEN,M.J.PLANTINGA,M.LUBBERS,Y.L.CHAN | 1Q93 430D Compare |
1BIV | FR3D | A | 140 | 56 | SOLUTION NMR | 12-23-96 | synthetic | BOVINE IMMUNODEFICIENCY VIRUS TAT-TAR COMPLEX, NMR, 5 STRUCTURES | X.YE,R.A.KUMAR,D.J.PATEL | |
2EZ6 | FR3D | CD | 56 | 26 | 2.0 | 2-07-06 | synthetic | CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS RNASE III (D44N) COMPLEXED WITH PRODUCT OF DOUBLE-STRANDED RNA PROCESSING | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | 2NUF Compare |
3O7V | FR3D | A | 26 | 12 | 2.1 | 1-12-11 | synthetic | CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END | Y.TIAN,D.K.SIMANSHU,J.-B.MA,D.J.PATEL | 3O6E 3O3I Compare |
2A9X | FR3D | 2 | 280 | 119 | SOLUTION NMR | 11-01-05 | synthetic | TAR RNA RECOGNITION BY A CYCLIC PEPTIDOMIMETIC OF TAT PROTEIN | T.C.LEEPER,Z.ATHANASSIOU,R.L.DIAS,J.A.ROBINSON,G.VARANI | |
2KMJ | FR3D | A | 280 | 114 | SOLUTION NMR | 8-18-09 | HUMAN IMMUNODEFICIENCY VIRUS 2 | HIGH RESOLUTION NMR SOLUTION STRUCTURE OF A COMPLEX OF HIV-2 TAR RNA AND A SYNTHETIC TRIPEPTIDE IN A 1:2 STOICHIOMETRY | J.FERNER,M.SUHARTONO,S.BREITUNG,H.R.A.JONKER,M.HENNIG, J.WOEHNERT,M.GOEBEL,H.SCHWALBE | |
1D4R | FR3D | AB | 54 | 22 | 2.0 | 12-02-99 | synthetic,synthetic | -MER FRAGMENT OF HUMAN SRP RNA HELIX 6 | K.WILD,O.WEICHENRIEDER,G.A.LEONARD,S.CUSACK | |
2AP5 | FR3D | A | 27 | 13 | SOLUTION NMR | 9-05-06 | synthetic | SOLUTION STRUCTURE OF THE C27A SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, AVERAGE STRUCTURE | P.V.CORNISH,D.P.GIEDROC | 2AP0 Compare |
1KPZ | FR3D | A | 27 | 10 | SOLUTION NMR | 1-11-02 | synthetic | PEMV-1 P1-P2 FRAMESHIFTING PSEUDOKNOT REGULARIZED AVERAGE STRUCTURE | P.L.NIXON,D.P.GIEDROC | 1KPY Compare |
2X7N | FR3D | A | 27 | 12 | 11.8 | 3-31-10 | SACCHAROMYCES CEREVISIAE | MECHANISM OF EIF6S ANTI-ASSOCIATION ACTIVITY | M.GARTMANN,M.BLAU,J.-P.ARMACHE,T.MIELKE,M.TOPF,R.BECKMANN | |
1XSG | FR3D | A | 27 | 12 | SOLUTION NMR | 12-28-04 | synthetic | SOLUTION STRUCTURE OF E.COLI RNASE P RNA P4 STEM OLIGORIBONUCLEOTIDE, U69A MUTATION | M.SCHMITZ | 1F7I 1XSH 2CD3 1F79 1XSU 1F7G 2CD6 1XST Compare |
2AHT | FR3D | A | 540 | 219 | SOLUTION NMR | 10-17-06 | synthetic | SOLUTION STRUCTURE OF DOMAIN 6 FROM THE AI5(GAMMA)GROUP II INTRON | M.C.ERAT,O.ZERBE,T.FOX,R.K.O.SIGEL | |
2IXY | FR3D | A | 621 | 251 | SOLUTION NMR | 9-06-06 | HEPATITIS B VIRUS | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
3DVZ | FR3D | A | 27 | 10 | 1.0 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA | V.OLIERIC,U.RIEDER,K.LANG,A.SERGANOV,C.SCHULZE-BRIESE,R.MICURA, P.DUMAS,E.ENNIFAR | 3DW7 3DW6 3DW4 3DW5 483D 1Q9A 480D 1MSY Compare |
1L2X | FR3D | A | 27 | 14 | 1.2 | 3-22-02 | synthetic | ATOMIC RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT | M.EGLI,G.MINASOV,L.SU,A.RICH | 437D 1L3D Compare |
1A3M | FR3D | AB | 540 | 202 | SOLUTION NMR | 4-29-98 | synthetic,synthetic | PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES | D.FOURMY,S.YOSHIZAWA,J.D.PUGLISI | 1BYJ 1PBR Compare |
2B63 | FR3D | R | 27 | 6 | 3.8 | 12-06-05 | synthetic | COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX | H.KETTENBERGER,A.EISENFUEHR,F.BRUECKNER,M.THEIS,M.FAMULOK, P.CRAMER | |
484D | FR3D | B | 594 | 219 | SOLUTION NMR | 10-14-99 | synthetic | SOLUTION STRUCTURE OF HIV-1 REV PEPTIDE-RNA APTAMER COMPLEX | X.YE,A.A.GORIN,R.FREDERICK,W.HU,A.MAJUMDAR,W.XU,G.MCLENDON, A.ELLINGTON,D.J.PATEL | |
1F7F | FR3D | A | 243 | 90 | SOLUTION NMR | 10-09-00 | synthetic | SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE, NMR, ENSEMBLE OF 9 STRUCTURES | M.SCHMITZ,I.TINOCO JR. | 2CD1 1F78 1F6X 2CD5 Compare |
1XOK | FR3D | AB | 36 | 13 | 3.0 | 1-04-05 | synthetic,synthetic | CRYSTAL STRUCTURE OF ALFALFA MOSAIC VIRUS RNA 3'UTR IN COMPLEX WITH COAT PROTEIN N TERMINAL PEPTIDE | L.M.GUOGAS,D.J.FILMAN,J.M.HOGLE,L.GEHRKE | |
1FYO | FR3D | A | 675 | 244 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA | S.R.LYNCH,J.D.PUGLISI | |
1F6Z | FR3D | A | 27 | 10 | SOLUTION NMR | 10-09-00 | synthetic | SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE | M.SCHMITZ,I.TINOCO JR. | |
1TOB | FR3D | A | 189 | 76 | SOLUTION NMR | 6-16-97 | synthetic | SACCHARIDE-RNA RECOGNITION IN AN AMINOGLYCOSIDE ANTIBIOTIC- RNA APTAMER COMPLEX, NMR, 7 STRUCTURES | L.JIANG,A.K.SURI,R.FIALA,D.J.PATEL | |
1YG4 | FR3D | A | 27 | 12 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, REGULARIZED AVERAGE STRUCTURE | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1FYP | FR3D | A | 783 | 283 | SOLUTION NMR | 3-14-01 | synthetic | EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX | S.R.LYNCH,J.D.PUGLISI | |
1F7H | FR3D | A | 297 | 110 | SOLUTION NMR | 10-09-00 | synthetic | SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE COMPLEXED WITH COBALT (III) HEXAMINE, NMR, ENSEMBLE OF 11 STRUCTURES | M.SCHMITZ,I.TINOCO JR. | |
1YSV | FR3D | A | 351 | 153 | SOLUTION NMR | 7-19-05 | synthetic | SOLUTION STRUCTURE OF THE CENTRAL REGION OF THE HUMAN GLUR- B R/G PRE-MRNA | R.STEFL,F.H.ALLAIN | |
2KXM | FR3D | A | 270 | 100 | SOLID-STATE NMR | 4-20-11 | synthetic | SOLUTION NMR STRUCTURE OF THE 27 NUCLEOTIDE ENGINEERED NEOMYCIN SENSING RIBOSWITCH RNA-RIBOSTMYCIN COMPLEX | D.ELKE,W.E.JULIA,O.OLIVER,S.R.SINA,S.BEATRIX,W.JENS | |
387D | FR3D | A | 26 | 5 | 3.1 | 8-26-03 | synthetic | RNA PSEUDOKNOT WITH 3D DOMAIN SWAPPING | S.E.LIETZKE,C.E.KUNDROT,C.L.BARNES | |
413D | FR3D | A | 26 | 12 | 1.8 | 7-10-98 | synthetic | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | Y.TANAKA,S.FUJII,H.HIROAKI,T.SAKATA,T.TANAKA,S.UESUGI,K.- I.TOMITA,Y.KYOGOKU | |
2RFK | FR3D | DEF | 61 | 24 | 2.9 | 2-05-08 | PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS,PYROCOCCUS FURIOSUS | SUBSTRATE RNA POSITIONING IN THE ARCHAEAL H/ACA RIBONUCLEOPROTEIN COMPLEX | B.LIANG,S.XUE,R.M.TERNS,M.P.TERNS,H.LI,SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) | |
2RP0 | FR3D | A | 728 | 294 | SOLUTION NMR | 3-31-09 | synthetic | REFINED SOLUTION STRUCTURE OF THE PEMV-1 MRNA PSEUDOKNOT, 28 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | 2RP1 Compare |
1QWB | FR3D | A | 442 | 150 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCUTRE OF 5'-R(GGACACGAAAUCCCGAAGUAGUGUCC)-3' : AN RNA HAIRPIN CONTAINING THE IN VITRO SELECTED CONSENSUS SEQUENCE FOR NUCLEOLIN RBD12 | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | |
2A43 | FR3D | A | 26 | 13 | 1.3 | 9-27-05 | synthetic | CRYSTAL STRUCTURE OF A LUTEOVIRAL RNA PSEUDOKNOT AND MODEL FOR A MINIMAL RIBOSOMAL FRAMESHIFTING MOTIF | P.S.PALLAN,W.S.MARSHALL,J.HARP,F.C.JEWETT III,Z.WAWRZAK, B.A.BROWN II,A.RICH,M.EGLI | |
2F8T | FR3D | CD | 50 | 24 | 3.1 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
2L5Z | FR3D | A | 546 | 206 | SOLUTION NMR | 2-16-11 | NEUROSPORA | NMR STRUCTURE OF THE A730 LOOP OF THE NEUROSPORA VS RIBOZYME | G.DESJARDINS,E.BONNEAU,N.GIRARD,J.BOISBOUVIER,P.LEGAULT | |
1EI2 | FR3D | A | 425 | 119 | SOLUTION NMR | 3-06-00 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF THE RNA MAJOR GROOVE IN THE TAU EXON 10 SPLICING REGULATORY ELEMENT BY AMINOGLYCOSIDE ANTIBIOTICS | L.VARANI,M.G.SPILLANTINI,M GOEDERT,G.VARANI | |
488D | FR3D | ABCD | 65 | 33 | 3.1 | 3-06-00 | synthetic,synthetic,synthetic,synthetic | CATALYTIC RNA ENZYME-PRODUCT COMPLEX | J.B.MURRAY,H.SZOKE,A.SZOKE,W.G.SCOTT | 1NYI 1Q29 379D 299D 1MME 301D 359D 300D Compare |
1QC8 | FR3D | A | 725 | 206 | SOLUTION NMR | 8-31-99 | synthetic | NMR STRUCTURE OF TAU EXON 10 SPLICING REGULATORY ELEMENT RNA | L.VARANI,M.G.SPILLANTINI,A.KLUG,M.GOEDERT,G.VARANI | |
2KGP | FR3D | A | 250 | 90 | SOLUTION NMR | 6-02-09 | synthetic | STRUCTURAL BASIS FOR STABILIZATION OF THE TAU PRE-MRNA SPLICING REGULATORY ELEMENT BY NOVANTRONE (MITOXANTRONE) | S.ZHENG,Y.CHEN,C.P.DONAHUE,M.S.WOLFE,G.VARANI | |
2QUX | FR3D | F | 150 | 54 | 2.4 | 12-18-07 | PSEUDOMONAS PHAGE PP7 | PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN | J.A.CHAO | |
1M82 | FR3D | A | 775 | 287 | SOLUTION NMR | 6-03-03 | synthetic | SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS | C.-J.PARK,S.-H.BAE,M.-K.LEE,G.VARANI,B.-S.CHOI | |
3HJY | FR3D | CDE | 60 | 22 | 3.6 | 6-23-09 | synthetic,synthetic,synthetic | STRUCTURE OF A FUNCTIONAL RIBONUCLEOPROTEIN PSEUDOURIDINE SYNTHASE BOUND TO A SUBSTRATE RNA | B.LIANG,J.ZHOU,E.KAHEN,R.M.TERNS,M.P.TERNS,H.LI | |
1KKS | FR3D | A | 360 | 105 | SOLUTION NMR | 3-13-02 | synthetic | STRUCTURE OF THE HISTONE MRNA HAIRPIN REQUIRED FOR CELL CYCLE REGULATION OF HISTONE GENE EXPRESSION | K.ZANIER,I.LUYTEN,C.CROMBIE,B MULLER,D.SCHUEMPERLI, J.P.LINGE,M.NILGES,M.SATTLER | |
1LC6 | FR3D | A | 960 | 329 | SOLUTION NMR | 5-29-02 | synthetic | SOLUTION STRUCTURE OF THE U6 INTRAMOLECULAR STEM-LOOP RNA | A.HUPPLER,L.J.NIKSTAD,A.M.ALLMANN,D.A.BROW,S.E.BUTCHER | |
283D | FR3D | A | 24 | 12 | 2.3 | 9-30-96 | engineered | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | K.J.BAEYENS,H.L.DE BONDT,A.PARDI,S.R.HOLBROOK | |
2HEM | FR3D | A | 216 | 90 | SOLUTION NMR | 9-12-06 | synthetic | NMR STRUCTURE AND MG2+ BINDING OF AN RNA SEGMENT THAT UNDERLIES THE L7/L12 STALK IN THE E.COLI 50S RIBOSOMAL SUBUNIT. | Q.ZHAO,U.NAGASWAMY,H.LEE,Y.XIA,X.GAO,G.FOX | |
2KEZ | FR3D | A | 240 | 90 | SOLUTION NMR | 7-21-09 | synthetic | NMR STRUCTURE OF U6 ISL AT PH 8.0 | V.VENDITTI,S.E.BUTCHER | |
1NYB | FR3D | B | 360 | 142 | SOLUTION NMR | 6-24-03 | ENTEROBACTERIA PHAGE PHI21 | SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX | C.D.CILLEY,J.R.WILLIAMSON | |
1NZ1 | FR3D | A | 391 | 153 | SOLUTION NMR | 5-13-03 | synthetic | SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM-LOOP CONTAINING AN SP PHOSPHOROTHIOATE AT NUCLEOTIDE U80 | N.J.REITER,L.J.NIKSTAD,A.M.ALLMAN,R.J.JOHNSON,S.E.BUTCHER | 1SYZ 1SY4 Compare |
3MIJ | FR3D | A | 24 | 12 | 2.6 | 2-16-11 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA G-QUADRUPLEX COMPLEXED WITH AN ACRIDINE-BASED LIGAND. | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
1RHT | FR3D | A | 24 | 6 | SOLUTION NMR | 6-03-95 | synthetic | -MER RNA HAIRPIN COAT PROTEIN BINDING SITE FOR BACTERIOPHAGE R17 (NMR, MINIMIZED AVERAGE STRUCTURE) | P.N.BORER,Y.LIN,S.WANG,M.W.ROGGENBUCK,J.M.GOTT, O.C.UHLENBECK,I.PELCZER | |
1NC0 | FR3D | A | 432 | 151 | SOLUTION NMR | 2-25-03 | synthetic | U80G U6 INTRAMOLECULAR STEM-LOOP RNA FROM SACCHAROMYCES CEREVISIAE | D.G.SASHITAL,A.M.ALLMANN,S.VAN DOREN,S.E.BUTCHER | |
2F4X | FR3D | AB | 864 | 360 | SOLUTION NMR | 2-28-06 | synthetic | NMR SOLUTION OF HIV-1 LAI KISSING COMPLEX | F.KIEKEN,F.PAQUET,F.BRULE,J.PAOLETTI,G.LANCELOT | |
1A9N | FR3D | Q | 48 | 12 | 2.4 | 9-23-98 | HOMO SAPIENS | CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA | S.R.PRICE,P.R.EVANS,K.NAGAI | |
2PN4 | FR3D | AB | 84 | 32 | 2.3 | 4-01-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF HEPATITIS C VIRUS IRES SUBDOMAIN IIA | Q.ZHAO,Q.HAN,C.R.KISSINGER,P.A.THOMPSON | 2PN3 Compare |
1MT4 | FR3D | A | 408 | 164 | SOLUTION NMR | 1-14-03 | synthetic | STRUCTURE OF 23S RIBOSOMAL RNA HAIRPIN 35 | I.LEBARS,S.YOSHIZAWA,A.R.STENHOLM,E.GUITTET,S.DOUTHWAITE, D.FOURMY | |
255D | FR3D | A | 24 | 12 | 2.0 | 2-07-95 | synthetic | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | S.R.HOLBROOK,C.CHEONG,I.TINOCO JR,S.-H.KIM | |
2ANN | FR3D | B | 23 | 6 | 2.3 | 10-24-06 | synthetic | CRYSTAL STRUCTURE (I) OF NOVA-1 KH1/KH2 DOMAIN TANDEM WITH 25 NT RNA HAIRPIN | L.MALININA,M.TEPLOVA,K.MUSUNURU,A.TEPLOV,J.C.DARNELL, S.K.BURLEY,R.B.DARNELL,D.J.PATEL | 2ANR Compare |
2NOK | FR3D | ABCD | 88 | 35 | 3.0 | 2-13-07 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DOMAIN FROM HEPATITIS C VIRUS. | S.M.DIBROV,H.JOHNSTON-COS,Y.H.WENG | 3P59 Compare |
1TFN | FR3D | A | 24 | 7 | SOLUTION NMR | 2-12-97 | synthetic | STRUCTURE REFINEMENT FOR A 24-NUCLEOTIDE RNA HAIRPIN, NMR, MINIMIZED AVERAGE STRUCTURE | D.J.KERWOOD,P.N.BORER | |
1E4P | FR3D | A | 480 | 184 | SOLUTION NMR | 1-16-01 | NEUROSPORA SP. | STRUCTURE OF THE RIBOZYME SUBSTRATE HAIRPIN OF NEUROSPORA VS RNA. A CLOSE LOOK AT THE CLEAVAGE SITE | P.J.A.MICHIELS,C.H.J.SCHOUTEN,H.A.HEUS,C.W.HILBERS | |
2QH2 | FR3D | A | 480 | 180 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE CR7 TERMINAL HAIRPIN LOOP FROM HUMAN TELOMERASE RNA | J.FEIGON,C.A.THEIMER,N CHIM,K.E.BREECE | |
3A6P | FR3D | DE | 92 | 44 | 2.9 | 12-08-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP:PRE-MIRNA COMPLEX | C.OKADA,E.YAMASHITA,S.J.LEE,S.SHIBATA,J.KATAHIRA,A.NAKAGAWA, Y.YONEDA,T.TSUKIHARA | |
2FRL | FR3D | A | 460 | 159 | SOLUTION NMR | 2-14-06 | synthetic | SOLUTION STRUCTURE OF THE HELIX II TEMPLATE BOUNDARY ELEMENT FROM TETRAHYMENA TELOMERASE RNA | R.J.RICHARDS,C.A.THEIMER,L.D.FINGER,J.FEIGON | |
2QEK | FR3D | AB | 46 | 20 | 1.8 | 5-06-08 | synthetic | HIV-1 SUBTYPE F DIS RNA EXTENDED DUPLEX FORM | S.FREISZ,E.ENNIFAR,P.DUMAS | |
2ES5 | FR3D | A | 460 | 200 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SRE RNA | F.H.T.ALLAIN | 2B6G 2ESE Compare |
1JTJ | FR3D | A | 437 | 132 | SOLUTION NMR | 12-11-02 | synthetic | SOLUTION STRUCTURE OF HIV-1LAI MUTATED SL1 HAIRPIN | F.KIEKEN,E.ARNOULT,F.BARBAULT,F.PAQUET,T.HUYNH-DINH, J.PAOLETTI,D.GENEST,G.LANCELOT | |
1NLC | FR3D | AB | 46 | 22 | 1.9 | 5-13-03 | synthetic | HIV-1 DIS(MAL) DUPLEX ZN-SOAKED | E.ENNIFAR,P.WALTER,P.DUMAS | 3DVV 1Y90 1WVD 1Y6T 1Y6S 2OIJ 462D 1Y95 1O3Z 1Y73 2OJ0 2OIY 3C44 3FAR 1Y99 Compare |
1BVJ | FR3D | A | 483 | 181 | SOLUTION NMR | 12-09-98 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 | HIV-1 RNA A-RICH HAIRPIN LOOP | E.V.PUGLISI,J.D.PUGLISI | |
1MWL | FR3D | AB | 42 | 18 | 2.4 | 2-18-03 | synthetic | CRYSTAL STRUCTURE OF GENETICIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE | Q.VICENS,E.WESTHOF | 422D 2ET4 2BEE 2ET5 1LC4 2ET3 2ESJ 2G5Q 1J7T 2PWT 2BE0 1YRJ 2ESI 2F4T Compare |
1S2F | FR3D | A | 23 | 9 | SOLUTION NMR | 8-31-04 | synthetic | AVERAGE SOLUTION STRUCTURE OF A PSEUDO-5'-SPLICE SITE FROM THE NEGATIVE REGULATOR OF SPLICING OF ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1XPE | FR3D | AB | 46 | 20 | 1.9 | 10-18-05 | synthetic | HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE | E.ENNIFAR,P.DUMAS | 2FD0 2FCY 1ZCI 1Y3S 1Y3O 1YXP 2FCX 2FCZ 1XP7 2B8R 1K9W 2B8S 1XPF Compare |
1S34 | FR3D | A | 345 | 135 | SOLUTION NMR | 8-31-04 | synthetic | SOLUTION STRUCTURE OF RESIDUES 907-929 FROM ROUS SARCOMA VIRUS | J.CABELLO-VILLEGAS,K.E.GILES,A.M.SOTO,P.YU,K.L.BEEMON, Y.X.WANG | |
1TLR | FR3D | A | 460 | 149 | SOLUTION NMR | 11-12-97 | synthetic | SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1MFK | FR3D | A | 460 | 179 | SOLUTION NMR | 11-13-02 | synthetic | STRUCTURE OF PROKARYOTIC SECIS MRNA HAIRPIN | D.FOURMY,E.GUITTET,S.YOSHIZAWA | |
1BGZ | FR3D | A | 138 | 47 | SOLUTION NMR | 1-13-99 | synthetic | S8 RRNA BINDING SITE FROM E. COLI, NMR, 6 STRUCTURES | K.KALURACHCHI,E.P.NIKONOWICZ | |
2PJP | FR3D | B | 23 | 10 | 2.3 | 10-30-07 | ESCHERICHIA COLI | STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA | N.SOLER,D.FOURMY,S.YOSHIZAWA | |
1OW9 | FR3D | A | 253 | 99 | SOLUTION NMR | 5-20-03 | synthetic | NMR STRUCTURE OF THE ACTIVE CONFORMATION OF THE VS RIBOZYME CLEAVAGE SITE | B.HOFFMANN,G.T.MITCHELL,P.GENDRON,F.MAJOR,A.A.ANDERSEN, R.A.COLLINS,P.LEGAULT | |
1K5I | FR3D | A | 230 | 91 | SOLUTION NMR | 10-17-01 | synthetic | NMR STRUCTURE OF A RIBOSOMAL RNA HAIRPIN CONTAINING A CONSERVED CUCAA PENTALOOP | U.NAGASWAMY,X.GAO,S.A.MARTINIS,G.E.FOX | |
2PLY | FR3D | E | 46 | 20 | 2.6 | 11-06-07 | MOORELLA THERMOACETICA | STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA. | N.SOLER,D.FOURMY,S.YOSHIZAWA | 1WSU 2UWM Compare |
3PHP | FR3D | A | 230 | 80 | SOLUTION NMR | 10-21-98 | synthetic | STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING | M.H.KOLK,M.VAN DER GRAAF,S.S.WIJMENGA,C.W.A.PLEIJ,H.A.HEUS, C.W.HILBERS | |
2QH3 | FR3D | A | 460 | 160 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U64 H/ACA SNORNA 3' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1JU1 | FR3D | AB | 690 | 292 | SOLUTION NMR | 8-23-02 | synthetic | DIMER INITIATION SEQUENCE OF HIV-1LAI GENOMIC RNA: NMR SOLUTION STRUCTURE OF THE EXTENDED DUPLEX | F.GIRARD,F.BARBAULT,G.LANCELOT | |
1NEM | FR3D | A | 207 | 88 | SOLUTION NMR | 8-31-99 | synthetic | SACCHARIDE-RNA RECOGNITION IN THE NEOMYCIN B / RNA APTAMER COMPLEX | L.JIANG,A.MAJUMDAR,W.HU,T.J.JAISHREE,W.XU,D.J.PATEL | |
1BAU | FR3D | AB | 46 | 18 | SOLUTION NMR | 4-27-99 | synthetic | NMR STRUCTURE OF THE DIMER INITIATION COMPLEX OF HIV-1 GENOMIC RNA, MINIMIZED AVERAGE STRUCTURE | A.MUJEEB,J.L.CLEVER,T.M.BILLECI,T.L.JAMES,T.G.PARSLOW | |
2RO2 | FR3D | A | 23 | 9 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN I OF THE NEGATIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,S.GAGO,M.DE LA PENA,R.FLORES | |
3BNL | FR3D | AB | 44 | 21 | 2.6 | 6-24-08 | synthetic | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING A SITE IN THE PRESENCE OF [CO(NH3)6]CL3 | J.KONDO,E.WESTHOF | |
1YG3 | FR3D | A | 540 | 198 | SOLUTION NMR | 12-13-05 | synthetic | SOLUTION STRUCTURE OF THE SCYLV P1-P2 FRAMESHIFTING PSEUDOKNOT, 20 LOWEST ENERGY STRUCTURES | P.V.CORNISH,M.HENNIG,D.P.GIEDROC | |
1IKD | FR3D | A | 660 | 206 | SOLUTION NMR | 4-01-97 | synthetic | ACCEPTOR STEM, NMR, 30 STRUCTURES | A.RAMOS,G.VARANI | |
3HTX | FR3D | BC | 88 | 40 | 3.1 | 9-29-09 | synthetic,synthetic | CRYSTAL STRUCTURE OF SMALL RNA METHYLTRANSFERASE HEN1 | Y.HUANG,L.-J.JI,Q.-C.HUANG,D.G.VASSYLYEV,X.-M.CHEN,J.-B.MA | 1EFS Compare |
3BNP | FR3D | AB | 43 | 16 | 2.7 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE (A1555G MUTANT) | J.KONDO,E.WESTHOF | 3BNO 3BNN Compare |
2FQN | FR3D | AB | 43 | 18 | 2.3 | 2-14-06 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE | J.KONDO,A.URZHUMTSEV,E.WESTHOF | 2G5K 2O3W Compare |
2JYM | FR3D | A | 330 | 135 | SOLUTION NMR | 4-29-08 | synthetic | SOLUTION STRUCTURE OF STEM-LOOP ALPHA OF THE HEPATITIS B VIRUS POST-TRANSCRIPTIONAL REGULATORY ELEMENT | O.OHLENSCHLAGER,M.GORLACH,M.SCHWALBE | |
1JUR | FR3D | A | 198 | 76 | SOLUTION NMR | 1-16-02 | synthetic | SOLUTION STRUCTURE OF HELIX III IN XENOPUS OOCYTE 5S RRNA. | P.W.HUBER,J.P.RIFE,P.B.MOORE | |
1K6G | FR3D | A | 440 | 183 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | |
1F9L | FR3D | A | 22 | 9 | SOLUTION NMR | 7-26-00 | synthetic | SOLUTION STRUCTURE OF A 22-NUCLEOTIDE HAIRPIN SIMILAR TO THE P5ABC REGION OF A GROUP I RIBOZYME WITH COBALT(III) HEXAMMINE COMPLEXED TO THE GAAA TETRALOOP | S.RUDISSER,I.TINOCO JR. | |
3BNQ | FR3D | AB | 86 | 32 | 2.0 | 6-24-08 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS MITOCHONDRIAL RIBOSOMAL DECODING SITE IN THE PRESENCE OF SRCL2 (A1555G MUTANT, BR-DERIVATIVE) | J.KONDO,E.WESTHOF | 3BNS 3BNR Compare |
3FTF | FR3D | CD | 44 | 20 | 2.8 | 3-24-09 | synthetic | CRYSTAL STRUCTURE OF A. AEOLICUS KSGA IN COMPLEX WITH RNA AND SAH | C.TU,X.JI | 3FTE Compare |
2GV3 | FR3D | A | 440 | 163 | SOLUTION NMR | 8-08-06 | synthetic | TRANSLOCATION OF A TRNA WITH AN EXTENDED ANTICODON THROUGH THE RIBOSOME | S.S.PHELPS,C.GAUDIN,S.YOSHIZAWA,C.BENITEZ,D.FOURMY,S.JOSEPH | |
2O3Y | FR3D | AB | 43 | 17 | 2.7 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE IN PRESENCE OF PAROMAMINE DERIVATIVE NB30 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | |
1FJE | FR3D | A | 418 | 148 | SOLUTION NMR | 1-03-01 | synthetic | SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA | F.H.T.ALLAIN,P.BOUVET,T.DIECKMANN,J.FEIGON | |
1TJZ | FR3D | A | 440 | 166 | SOLUTION NMR | 9-28-04 | synthetic | SOLUTION STRUCTURE OF THE ACTIVE SITE STEM-LOOP OF THE VS RIBOZYME | J.FLINDERS,T.DIECKMANN | |
2GRW | FR3D | A | 264 | 91 | SOLUTION NMR | 3-06-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | |
2GV4 | FR3D | A | 286 | 119 | SOLUTION NMR | 3-20-07 | synthetic | SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM | H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS | 1N66 Compare |
3MEI | FR3D | AB | 44 | 19 | 2.0 | 1-26-11 | synthetic | REGULATORY MOTIF FROM THE THYMIDYLATE SYNTHASE MRNA | S.DIBROV,J.MCLEAN,T.HERMANN | |
1OSW | FR3D | A | 506 | 181 | SOLUTION NMR | 5-20-03 | synthetic | THE STEM OF SL1 RNA IN HIV-1: STRUCTURE AND NUCLEOCAPSID PROTEIN BINDING FOR A 1X3 INTERNAL LOOP | Y.YUAN,D.J.KERWOOD,A.C.PAOLETTI,M.F.SHUBSDA,P.N.BORER | |
2O3V | FR3D | AB | 43 | 17 | 2.8 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB33 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | |
1NTB | FR3D | AB | 40 | 15 | 2.9 | 5-13-03 | synthetic,synthetic | .9 A CRYSTAL STRUCTURE OF STREPTOMYCIN RNA-APTAMER COMPLEX | V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 1NTA Compare |
2HNS | FR3D | A | 440 | 180 | SOLUTION NMR | 10-31-06 | synthetic | STRUCTURE OF THE AAGU TETRALOOP | C.GAUDIN,F.FOURMY,S.YOSHIZAWA | |
2KD8 | FR3D | A | 264 | 108 | SOLUTION NMR | 1-19-10 | synthetic | SOLUTION STRUCTURE OF THE STEM-LOOP IIID OF GBV-B IRES | V.THIVIYANATHAN,R.KULASEGRAN SHYLINI,D.G.GORENSTEIN, K.KALUARACHCHI | |
2JSE | FR3D | A | 220 | 80 | SOLUTION NMR | 11-20-07 | synthetic | NMR REVEALS ABSENCE OF HYDROGEN BONDING IN ADJACENT UU AND AG MISMATCHES IN AN ISOLATED INTERNAL LOOP FROM RIBOSOMAL RNA. | N.SHANKAR | |
1PJY | FR3D | A | 440 | 195 | SOLUTION NMR | 8-05-03 | synthetic | SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING STEM- LOOP RNA | D.W.STAPLE,S.E.BUTCHER | |
2F8S | FR3D | CD | 44 | 18 | 3.0 | 10-31-06 | synthetic | CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA | Y.R.YUAN,H.Y.CHEN,D.J.PATEL | |
1DZ5 | FR3D | CD | 572 | 182 | SOLUTION NMR | 3-29-00 | HOMO SAPIENS | THE NMR STRUCTURE OF THE 38KDA U1A PROTEIN-PIE RNA COMPLEX REVEALS THE BASIS OF COOPERATIVITY IN REGULATION OF POLYADENYLATION BY HUMAN U1A PROTEIN | L.VARANI,S.I.GUNDERSON,I.W.MATTAJ,L.E.KAY,D.NEUHAUS,G.VARANI | |
1IE1 | FR3D | A | 396 | 125 | SOLUTION NMR | 6-20-01 | synthetic | NMR SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY HAMSTER NUCLEOLIN RBD12. | P.BOUVET,F.H-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
2K66 | FR3D | A | 440 | 200 | SOLUTION NMR | 7-14-09 | synthetic | NMR SOLUTION STRUCTURE OF THE D3'-STEM CLOSED BY A GAAA TETRALOOP OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
2G1W | FR3D | A | 330 | 108 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF THE AQUIFEX AEOLICUS TMRNA PSEUDOKNOT PK1 | S.NONIN-LECOMTE,F.DARDEL | |
3LOA | FR3D | AB | 42 | 15 | 2.3 | 8-04-10 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE RNA CONSTRUCT WITH TWO ADJACENT LIGAND BINDING SITES OF HELIX H44 IN 16S RIBOSOMAL RNA | S.DIBROV | |
1K6H | FR3D | A | 440 | 189 | SOLUTION NMR | 12-19-01 | synthetic | SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING | I.LEBARS,B.LAMONTAGNE,S.YOSHIZAWA,S.ABOU ELELA,D.FOURMY | 1K4A Compare |
2W2H | FR3D | S | 44 | 7 | 3.2 | 12-09-08 | EQUINE INFECTIOUS ANEMIA VIRUS | STRUCTURAL BASIS OF TRANSCRIPTION ACTIVATION BY THE CYCLIN T1-TAT-TAR RNA COMPLEX FROM EIAV | K.ANAND,M.GEYER | |
1K2G | FR3D | A | 22 | 8 | SOLUTION NMR | 5-08-02 | synthetic | STRUCTURAL BASIS FOR THE 3'-TERMINAL GUANOSINE RECOGNITION BY THE GROUP I INTRON | Y.KITAMURA,Y.MUTO,S.WATANABE,I.KIM,T.ITO,Y.NISHIYA, K.SAKAMOTO,T.OHTSUKI,G.KAWAI,K.WATANABE,K.HOSONO,H.TAKAKU, E.KATOH,T.YAMAZAKI,T.INOUE,S.YOKOYAMA | |
1RLG | FR3D | D | 44 | 18 | 2.7 | 6-01-04 | synthetic | MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO- CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX | T.MOORE,Y.ZHANG,M.O.FENLEY,H.LI | |
1IE2 | FR3D | A | 462 | 156 | SOLUTION NMR | 6-20-01 | synthetic | SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY RBD12 OF HAMSTER NUCLEOLIN.SNRE (ANTI) | P.BOUVET,F.H.-T.ALLAIN,L.D.FINGER,T.DIECKMANN,J.FEIGON | |
1FEU | FR3D | BC | 80 | 32 | 2.3 | 6-25-01 | synthetic,synthetic | CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. | R.V.FEDOROV,V.A.MESHCHERYAKOV,G.M.GONGADZE,N.P.FOMENKOVA, N.A.NEVSKAYA,M.SELMER,M.LAURBERG,O.KRISTENSEN,S.AL- KARADAGHI,A.LILJAS,M.B.GARBER,S.V.NIKONOV | |
1JP0 | FR3D | A | 588 | 196 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITHOUT RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
2O3X | FR3D | AB | 42 | 17 | 2.9 | 11-06-07 | synthetic | CRYSTAL STRUCTURE OF THE PROKARYOTIC RIBOSOMAL DECODING SITE COMPLEXED WITH PAROMAMINE DERIVATIVE NB30 | J.KONDO,M.HAINRICHSON,I.NUDELMAN,D.SHALLOM-SHEZIFI,T.BAASOV, E.WESTHOF | 2F4S Compare |
1URN | FR3D | Q | 55 | 13 | 1.9 | 3-08-96 | synthetic | U1A MUTANT/RNA COMPLEX + GLYCEROL | C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI | |
1SZY | FR3D | A | 21 | 7 | SOLUTION NMR | 4-20-04 | synthetic | SOLUTION STRUCTURE OF ITALY1 ("INITIATOR TRNA ANTICODON LOOP FROM YEAST"), AN UNMODIFIED 21-NT RNA WITH THE SEQUENCE OF THE ANTICODON STEM-LOOP OF YEAST INITIATOR TRNA | D.C.SCHWEISGUTH,P.B.MOORE | |
1QWA | FR3D | A | 357 | 144 | SOLUTION NMR | 11-25-03 | synthetic | NMR STRUCTURE OF 5'-R(GGAUGCCUCCCGAGUGCAUCC): AN RNA HAIRPIN DERIVED FROM THE MOUSE 5'ETS THAT BINDS NUCLEOLIN RBD12. | L.D.FINGER,L.TRANTIREK,C.JOHANSSON,J.FEIGON | 2XLI 2XLK 2XLJ 2RPT Compare |
1K8W | FR3D | B | 21 | 8 | 1.9 | 12-31-01 | synthetic | CRYSTAL STRUCTURE OF THE E. COLI PSEUDOURIDINE SYNTHASE TRUB BOUND TO A T STEM-LOOP RNA | C.HOANG,A.R.FERRE-D'AMARE | 2AB4 1ZL3 1ZE2 Compare |
1O9M | FR3D | AB | 42 | 17 | 2.4 | 3-27-03 | ESCHERICHIA COLI | THE COMPLEX OF A NOVEL ANTIBIOTIC WITH THE AMINOACYL SITE OF THE BACTERIAL RIBOSOME REVEALED BY X-RAY CRYSTALLOGRAPHY. | R.RUSSELL,J.B.MURRAY | 2F4U 2ET8 Compare |
2ZKO | FR3D | CD | 42 | 18 | 1.7 | 10-14-08 | INFLUENZA A VIRUS | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUMAN INFLUENZA VIRUS A | Y.A.YUAN | |
2BJ2 | FR3D | AB | 40 | 20 | SOLUTION NMR | 2-02-99 | synthetic,synthetic | RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE | A.J.LEE,D.M.CROTHERS | 1BJ2 Compare |
2FY1 | FR3D | B | 357 | 136 | SOLUTION NMR | 2-06-07 | HOMO SAPIENS | A DUAL MODE OF RNA RECOGNITION BY THE RBMY PROTEIN | L.SKRISOVSKA,C.BOURGOIS,R.STEFL,L.KISTER,P.WENTER,D.ELLIOT, J.STEVENIN,F.H.T.ALLAIN | |
1RPU | FR3D | CD | 42 | 19 | 2.5 | 1-13-04 | synthetic | CRYSTAL STRUCTURE OF CIRV P19 BOUND TO SIRNA | J.M.VARGASON,G.SZITTYA,J.BURGYAN,T.M.T.HALL | |
1RKJ | FR3D | B | 294 | 98 | SOLUTION NMR | 4-27-04 | MESOCRICETUS AURATUS | SOLUTION STRUCTURE OF THE COMPLEX FORMED BY THE TWO N- TERMINAL RNA-BINDING DOMAINS OF NUCLEOLIN AND A PRE-RRNA TARGET | C.JOHANSSON,L.D.FINGER,L.TRANTIREK,T.D.MUELLER,S.KIM, I.A.LAIRD-OFFRINGA,J.FEIGON | |
2H2X | FR3D | A | 420 | 143 | SOLUTION NMR | 10-03-06 | synthetic | SOLUTION STRUCTURE OF THE TETRAHYMENA TELOMERASE RNA STEM IV TERMINAL LOOP | R.J.RICHARDS,H.WU,L.TRANTIREK,C.M.O'CONNOR,K.COLLINS, J.FEIGON | |
1JOX | FR3D | A | 504 | 167 | SOLUTION NMR | 5-01-02 | synthetic | NMR STRUCTURE OF THE LP5.1 HAIRPIN FROM BACILLUS RNASE P RNA REFINED WITH RESIDUAL DIPOLAR COUPLINGS | T.C.LEEPER,F.J.SCHMIDT,S.R.VAN DOREN | |
1D0U | FR3D | A | 483 | 184 | SOLUTION NMR | 5-24-00 | synthetic | SOLUTION STRUCTURE OF AN RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN | J.S.SMITH,E.P.NIKONOWICZ | |
3DH3 | FR3D | EF | 84 | 26 | 3.0 | 4-28-09 | synthetic | CRYSTAL STRUCTURE OF RLUF IN COMPLEX WITH A 22 NUCLEOTIDE RNA SUBSTRATE | A.ALIAN,A.DEGIOVANNI,R.M.STROUD,J.S.FINER-MOORE | |
2RPK | FR3D | A | 20 | 7 | SOLUTION NMR | 12-30-08 | synthetic | SOLUTION STRUCTURE OF DOMAIN II OF THE POSITIVE POLARITY CCHMVD HAMMERHEAD RIBOZYME | J.GALLEGO,D.DUFOUR,M.DE LA PENA,S.GAGO,R.FLORES | |
2TOB | FR3D | A | 260 | 90 | SOLUTION NMR | 6-22-99 | synthetic | SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES | L.JIANG,D.J.PATEL | |
1BN0 | FR3D | A | 220 | 83 | SOLUTION NMR | 4-27-99 | synthetic | SL3 HAIRPIN FROM THE PACKAGING SIGNAL OF HIV-1, NMR, 11 STRUCTURES | L.PAPPALARDO,D.J.KERWOOD,I.PELCZER,P.N.BORER | |
1HLX | FR3D | A | 400 | 154 | SOLUTION NMR | 9-15-95 | synthetic | P1 HELIX NUCLEIC ACIDS (DNA/RNA) RIBONUCLEIC ACID | F.H.-T.ALLAIN,G.VARANI | |
1A1T | FR3D | B | 500 | 198 | SOLUTION NMR | 6-17-98 | synthetic | STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO THE SL3 PSI-RNA RECOGNITION ELEMENT, NMR, 25 STRUCTURES | R.N.DE GUZMAN,Z.R.WU,C.C.STALLING,L.PAPPALARDO,P.N.BORER, M.F.SUMMERS | |
2O33 | FR3D | A | 400 | 159 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM S. CEREVISIAE | D.G.SASHITAL,V.VENDITTI,C.A.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
1EC6 | FR3D | C | 40 | 9 | 2.4 | 2-21-00 | synthetic | CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN | H.A.LEWIS,K.MUSUNURU,K.B.JENSEN,C.EDO,H.CHEN | |
2I82 | FR3D | E | 79 | 28 | 2.0 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE | C.HOANG | |
3NJ6 | FR3D | A | 20 | 8 | 0.9 | 8-25-10 | synthetic | .95 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | 3NJ7 Compare |
1U2A | FR3D | A | 20 | 8 | SOLUTION NMR | 3-04-98 | SACCHAROMYCES CEREVISIAE | STEM LOOP IIA FROM U2SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE | S.C.STALLINGS,P.B.MOORE | |
2U2A | FR3D | A | 20 | 7 | SOLUTION NMR | 3-04-98 | SACCHAROMYCES CEREVISIAE | STEM LOOP IIA FROM U2 SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE | S.C.STALLINGS,P.B.MOORE | |
361D | FR3D | AB | 40 | 9 | 3.0 | 7-01-98 | synthetic | CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP | M.PERBANDT,A.NOLTE,S.LORENZ,V.A.ERDMANN,C.BETZEL | |
1MFJ | FR3D | A | 200 | 76 | SOLUTION NMR | 11-06-02 | synthetic | ' STEM-LOOP FROM HUMAN U4 SNRNA | L.R.COMOLLI,N.B.ULYANOV,T.L.JAMES,W.H.GMEINER | |
2JPP | FR3D | D | 400 | 140 | SOLUTION NMR | 8-21-07 | PSEUDOMONAS FLUORESCENS | STRUCTURAL BASIS OF RSMA/CSRA RNA RECOGNITION: STRUCTURE OF RSME BOUND TO THE SHINE-DALGARNO SEQUENCE OF HCNA MRNA | M.SCHUBERT,K.LAPOUGE,O.DUSS,F.C.OBERSTRASS,I.JELESAROV, D.HAAS,F.H.-T.ALLAIN | |
1SLO | FR3D | A | 19 | 7 | SOLUTION NMR | 12-07-96 | CAENORHABDITIS ELEGANS | FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS, NMR, MINIMIZED AVERAGE STRUCTURE | N.L.GREENBAUM,I.RADHAKRISHNAN,D.J.PATEL,D.HIRSH | 1SLP Compare |
1QC0 | FR3D | CD | 57 | 28 | 1.6 | 11-11-99 | synthetic,synthetic,synthetic,synthetic | CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
1DFU | FR3D | MN | 38 | 15 | 1.8 | 12-02-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION | M.LU,T.A.STEITZ | |
2RLU | FR3D | A | 190 | 70 | SOLUTION NMR | 2-26-08 | synthetic | THE THREE DIMENSIONAL STRUCTURE OF THE MOORELLA THERMOACETICA SELENOCYSTEINE INSERTION SEQUENCE RNA HAIRPIN AND ITS INTERACTION WITH THE ELONGATION FACTOR SELB | A.V.BERIBISKY,T.J.TAVARES,A.N.AMBORSKI,M.MOTAMED, A.E.JOHNSON,T.L.MARK,P.E.JOHNSON | |
1I3X | FR3D | A | 285 | 117 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA | S.C.BLANCHARD,J.D.PUGLISI | |
1ESY | FR3D | A | 380 | 135 | SOLUTION NMR | 5-31-00 | synthetic | NMR STRUCTURE OF STEM LOOP SL2 OF THE HIV-1 PSI RNA PACKAGING SIGNAL REVEALS A NOVEL A-U-A BASE-TRIPLE PLATFORM | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,M.F.SUMMERS | |
2ZI0 | FR3D | CD | 38 | 18 | 2.8 | 7-22-08 | synthetic | CRYSTAL STRUCTURE OF TAV2B/SIRNA COMPLEX | Y.A.YUAN,H.-Y.CHEN | |
2C4Z | FR3D | R | 26 | 10 | 2.6 | 1-05-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (2SU -5-6) COMPLEX | E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS | 1ZDH 2IZM 2C50 2IZ9 2C51 2BNY 2B2E 1AQ4 2C4Y 2BU1 1ZDI 1U1Y 2B2G 1AQ3 2IZ8 2C4Q 5MSF 2BQ5 1ZDK Compare |
2B7G | FR3D | A | 190 | 70 | SOLUTION NMR | 1-24-06 | synthetic | STRUCTURE OF THE SMAUG RECOGNITION RNA ELEMENT | P.E.JOHNSON,L.W.DONALDSON | |
1F27 | FR3D | AB | 30 | 14 | 1.3 | 6-12-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT | J.NIX,D.SUSSMAN,C.WILSON | |
2XEB | FR3D | AB | 330 | 132 | SOLUTION NMR | 5-26-10 | HOMO SAPIENS,HOMO SAPIENS | NMR STRUCTURE OF THE PROTEIN-UNBOUND SPLICEOSOMAL U4 SNRNA 5' STEM LOOP | M.FALB,I.AMATA,F.GABEL,B.SIMON,T.CARLOMAGNO | |
1Q2R | FR3D | EF | 38 | 13 | 2.9 | 9-09-03 | synthetic | CHEMICAL TRAPPING AND CRYSTAL STRUCTURE OF A CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE COVALENT INTERMEDIATE | W.XIE,X.LIU,R.H.HUANG | 1Q2S Compare |
1UUU | FR3D | A | 285 | 93 | SOLUTION NMR | 2-25-98 | synthetic | STRUCTURE OF AN RNA HAIRPIN LOOP WITH A 5'-CGUUUCG-3' LOOP MOTIF BY HETERONUCLEAR NMR SPECTROSCOPY AND DISTANCE GEOMETRY, 15 STRUCTURES | C.SICH,O.OHLENSCHLAGER,R.RAMACHANDRAN,M.GORLACH,L.R.BROWN | |
1R9F | FR3D | BC | 38 | 19 | 1.9 | 1-27-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF P19 COMPLEXED WITH 19-BP SMALL INTERFERING RNA | K.YE,L.MALININA,D.J.PATEL | |
1ATO | FR3D | A | 190 | 60 | SOLUTION NMR | 11-12-97 | HEPATITIS DELTA VIRUS | THE STRUCTURE OF THE ISOLATED, CENTRAL HAIRPIN OF THE HDV ANTIGENOMIC RIBOZYME, NMR, 10 STRUCTURES | M.H.KOLK,H.A.HEUS,C.W.HILBERS | |
3CZ3 | FR3D | GH | 76 | 36 | 3.2 | 5-05-09 | synthetic,TOMATO ASPERMY VIRUS | CRYSTAL STRUCTURE OF TOMATO ASPERMY VIRUS 2B IN COMPLEX WITH SIRNA | J.B.MA,F.LI,S.W.DING,D.J.PATEL | |
1T0D | FR3D | AB | 64 | 28 | 2.2 | 6-15-04 | synthetic,synthetic | CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA | S.SHANDRICK,Q.ZHAO,Q.HAN,B.K.AYIDA,M.TAKAHASHI,G.C.WINTERS, K.B.SIMONSEN,D.VOURLOUMIS,T.HERMANN | 1ZX7 2A04 1ZZ5 1T0E Compare |
3OL9 | FR3D | JKLNOP | 140 | 62 | 2.2 | 12-22-10 | synthetic,synthetic,synthetic | POLIOVIRUS POLYMERASE ELONGATION COMPLEX WITH 3'-DEOXY-CTP | P.GONG,O.B.PEERSEN | 3OL8 3OL7 3OLB 3OL6 3OLA Compare |
3BT7 | FR3D | D | 36 | 11 | 2.4 | 4-29-08 | synthetic | STRUCTURE OF E. COLI 5-METHYLURIDINE METHYLTRANSFERASE TRMA IN COMPLEX WITH 19 NUCLEOTIDE T-ARM ANALOGUE | A.ALIAN,R.M.STROUD,J.FINER-MOORE | |
3KS8 | FR3D | EF | 36 | 18 | 2.4 | 1-12-10 | synthetic,synthetic | CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMAIN IN COMPLEX WITH 18BP DSRNA | C.R.KIMBERLIN,Z.A.BORNHOLDT,S.LI,V.L.WOODS,I.J.MACRAE, E.O.SAPHIRE | |
2QH4 | FR3D | A | 360 | 121 | SOLUTION NMR | 9-25-07 | synthetic | SOLUTION STRUCTURE OF THE U85 C/D-H/ACA SCARNA 5' TERMINAL HAIRPIN LOOP | J.FEIGON,C.A.THEIMER,N.CHIM,K.E.BREECE | |
1SI3 | FR3D | B | 18 | 6 | 2.6 | 5-25-04 | synthetic | CRYSTAL STRUCTURE OF THE PAZ DOMAIN OF HUMAN EIF2C1 IN COMPLEX WITH A 9-MER SIRNA-LIKE DUPLEX | K.YE,J.B.MA,D.PATEL | |
1F6U | FR3D | B | 360 | 109 | SOLUTION NMR | 10-09-00 | HUMAN IMMUNODEFICIENCY VIRUS 1 | NMR STRUCTURE OF THE HIV-1 NUCLEOCAPSID PROTEIN BOUND TO STEM-LOOP SL2 OF THE PSI-RNA PACKAGING SIGNAL. IMPLICATIONS FOR GENOME RECOGNITION | G.K.AMARASINGHE,R.N.DE GUZMAN,R.B.TURNER,K.J.CHANCELLOR, M.F.SUMMERS | |
1F5U | FR3D | AB | 36 | 16 | SOLUTION NMR | 8-21-00 | synthetic | SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM- LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA | C.-H.KIM,I.TINOCO JR. | |
1ZEV | FR3D | AB | 36 | 13 | 1.6 | 10-25-05 | synthetic | CRYSTAL STRUCTURE OF A PATHOGENIC RNA: CUG REPEATS | B.H.MOOERS,J.S.LOGUE,J.A.BERGLUND | 3GM7 Compare |
2GVO | FR3D | A | 378 | 113 | SOLUTION NMR | 5-08-07 | synthetic | SOLUTION STRUCTURE OF A PURINE RICH HEXALOOP HAIRPIN BELONGING TO PGY/MDR1 MRNA AND TARGETED BY ANTISENSE OLIGONUCLEOTIDES | F.JOLI,N.BOUCHEMAL,A.LAIGLE,B.HARTMANN,E.HANTZ | |
1AJF | FR3D | A | 18 | 8 | SOLUTION NMR | 7-07-97 | synthetic | SOLUTION STRUCTURE OF THE P5B STEM LOOP FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE | J.S.KIEFT,I.TINOCO JUNIOR | |
1Z30 | FR3D | A | 270 | 105 | SOLUTION NMR | 4-26-05 | synthetic | NMR STRUCTURE OF THE APICAL PART OF STEMLOOP D FROM CLOVERLEAF 1 OF BOVINE ENTEROVIRUS 1 RNA | Y.IHLE,O.OHLENSCHLAGER,E.DUCHARDT,R.RAMACHANDRAN,M.GORLACH | |
2GJW | FR3D | EFH | 71 | 32 | 2.9 | 9-12-06 | synthetic,synthetic,synthetic | RNA RECOGNITION AND CLEAVAGE BY AN SPLICING ENDONUCLEASE | S.XUE,K.CALVIN,H.LI | |
2OE5 | FR3D | AB | 33 | 14 | 1.5 | 2-13-07 | synthetic,synthetic | .5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'- OVERHANG | T.HERMANN,V.TERESHKO,E.SKRIPKIN,D.J.PATEL | 2OE8 2OE6 Compare |
2JR4 | FR3D | A | 187 | 59 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E.COLI TRNA-VAL3 WITH NO MODIFICATIONS | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
2D18 | FR3D | AB | 374 | 153 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2KPD | FR3D | A | 170 | 42 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV-MUTANT | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
2KRQ | FR3D | A | 16 | 6 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE TRNA-ARG2 (ICG) ASL. | Y.BILBILLE,P.F.AGRIS | 2KRW 2KRP Compare |
2KPC | FR3D | A | 170 | 56 | SOLUTION NMR | 6-30-10 | synthetic | STRUCTURE DETERMINATION OF THE TOP-LOOP OF THE CONSERVED 3 TERMINAL SECONDARY STRUCTURE IN THE GENOME OF YFV | E.LESCRINIER,N.DYUBANKOVA,K.NAUWELAERTS,R.JONES,P.HERDEWIJN | |
1YN2 | FR3D | A | 187 | 66 | SOLUTION NMR | 1-24-06 | synthetic | SOLUTION STRUCTURE OF THE NEUROSPORA VS RIBOZYME STEM-LOOP V IN THE PRESENCE OF MGCL2 WITH MODELING OF BOUND MANGANESE IONS | D.O.CAMPBELL,P.LEGAULT | 1TBK 1YN1 Compare |
2KVN | FR3D | A | 510 | 152 | SOLUTION NMR | 7-07-10 | synthetic | PHI29 E-LOOP HAIRPIN | S.M.HARRIS,S.J.SCHROEDER | |
1WKS | FR3D | A | 357 | 144 | SOLUTION NMR | 6-22-04 | synthetic | SOLUTION STRUCTURE OF AN RNA STEM-LOOP DERIVED FROM THE 3' CONSERVED REGION OF EEL LINE UNAL2 | S.BABA,M.KAJIKAWA,N.OKADA,G.KAWAI | |
2JLT | FR3D | AB | 32 | 15 | 2.9 | 8-18-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN RNA KISSING COMPLEX | C.DIPRIMO,S.FRIBOURG | |
1R3E | FR3D | DE | 50 | 20 | 2.1 | 11-04-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA-PROTEIN RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT | H.PAN,S.AGARWALLA,D.T.MOUSTAKAS,J.FINER-MOORE,R.M.STROUD | |
1BZ3 | FR3D | A | 17 | 5 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | 1BZT Compare |
1KKA | FR3D | A | 136 | 47 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
1BZ2 | FR3D | A | 17 | 6 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS,3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
1J4Y | FR3D | A | 17 | 6 | SOLUTION NMR | 7-17-02 | synthetic | SOLUTION STRUCTURE OF THE UNMODIFIED ANTICODON STEM-LOOP FROM E. COLI TRNA(PHE) | J.CABELLO-VILLEGAS,M.E.WINKLER,E.P.NIKONOWICZ | |
2D19 | FR3D | AB | 374 | 164 | SOLUTION NMR | 11-01-05 | synthetic | SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
2L6I | FR3D | A | 432 | 162 | SOLUTION NMR | 3-23-11 | synthetic | SOLUTION STRUCTURE OF CORONAVIRAL STEM-LOOP 2 (SL2) | C.LEE,L.LI,D.P.GIEDROC | |
1JTW | FR3D | A | 224 | 65 | SOLUTION NMR | 12-12-01 | synthetic | STRUCTURE OF SL4 RNA FROM THE HIV-1 PACKAGING SIGNAL | D.J.KERWOOD,M.J.CAVALUZZI,P.N.BORER | |
2D17 | FR3D | AB | 330 | 141 | SOLUTION NMR | 11-01-05 | synthetic,synthetic | SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV- 1 DIMERIZATION INITIATION SITE | S.BABA,K.TAKAHASHI,S.NOGUCHI,H.TAKAKU,Y.KOYANAGI,N.YAMAMOTO, G.KAWAI | |
3L26 | FR3D | C | 16 | 8 | 2.4 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | 333D Compare |
406D | FR3D | AE | 32 | 15 | 1.8 | 2-05-99 | engineered | '-R(*CP*AP*CP*CP*GP*GP*AP*UP*GP*GP*UP*(BRO) UP*CP*GP*GP*UP*G)-3' | S.A.SHAH,A.T.BRUNGER | |
1RXA | FR3D | A | 16 | 8 | 2.9 | 10-20-96 | synthetic | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | S.PORTMANN,N.USMAN,M.EGLI | |
1JWC | FR3D | A | 16 | 6 | SOLUTION NMR | 3-20-02 | synthetic | NMR SOLUTION STRUCTURE OF THE RNA HAIRPIN BINDING SITE FOR THE HISTONE STEM-LOOP BINDING PROTEIN | E.S.DEJONG,W.F.MARZLUFF,E.P.NIKONOWICZ | 1JU7 Compare |
1BZU | FR3D | A | 16 | 4 | SOLUTION NMR | 4-27-99 | synthetic | STABILIZATION OF THE ANTICODON STEM-LOOP OF TRNALYS, 3 BY AN A+C BASE PAIR AND BY PSEUDOURIDINE, NMR, 1 STRUCTURE | P.C.DURANT,D.R.DAVIS | |
2KYD | FR3D | AB | 640 | 320 | SOLUTION NMR | 7-07-10 | synthetic | RDC AND RCSA REFINEMENT OF AN A-FORM RNA: IMPROVEMENTS IN MAJOR GROOVE WIDTH | B.S.TOLBERT,M.F.SUMMERS,Y.MIYAZAKI,S.BARTON,B.KINDE,P.STARK,R.SINGH, A.BAX,D.CASE | 1QBP Compare |
2KRZ | FR3D | A | 160 | 39 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET | Y.BILBILLE,P.F.AGRIS | |
1N53 | FR3D | AB | 25 | 8 | SOLUTION NMR | 4-29-03 | synthetic,synthetic | SOLUTION STRUCTURE OF B. SUBTILIS T BOX ANTITERMINATOR RNA | M.S.GERDEMAN,T.M.HENKIN,J.V.HINES | |
1LU3 | FR3D | A | 16 | 3 | 16.8 | 6-26-02 | SACCHAROMYCES CEREVISIAE | SEPARATE FITTING OF THE ANTICODON LOOP REGION OF TRNA (NUCLEOTIDE 26-42) IN THE LOW RESOLUTION CRYO-EM MAP OF AN EF-TU TERNARY COMPLEX (GDP AND KIRROMYCIN) BOUND TO E. COLI 70S RIBOSOME | M.VALLE,J.SENGUPTA,N.K.SWAMI,R.A.GRASSUCCI,N.BURKHARDT, K.H.NIERHAUS,R.K.AGRAWAL,J.FRANK | |
2RN1 | FR3D | AB | 544 | 284 | SOLUTION NMR | 9-23-08 | synthetic,synthetic | LIQUID CRYSTAL SOLUTION STRUCTURE OF THE KISSING COMPLEX FORMED BY THE APICAL LOOP OF THE HIV TAR RNA AND A HIGH AFFINITY RNA APTAMER OPTIMIZED BY SELEX | H.VAN MELCKEBEKE,M.DEVANY,C.DI PRIMO,F.BEAURAIN,J.TOULME, D.L.BRYCE,J.BOISBOUVIER | |
420D | FR3D | AB | 32 | 16 | 1.9 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES | B.PAN,S.N.MITRA,M.SUNDARALINGAM | |
1KIS | FR3D | AB | 32 | 13 | SOLUTION NMR | 10-15-97 | synthetic,synthetic | TAR-TAR "KISSING" HAIRPIN COMPLEX DERIVED FROM THE HIV GENOME, NMR, 1 STRUCTURE | K.Y.CHANG,I.TINOCO JUNIOR | |
2PN9 | FR3D | AB | 300 | 126 | SOLUTION NMR | 10-30-07 | synthetic,synthetic | NMR STRUCTURE OF A KISSING COMPLEX FORMED BETWEEN THE TAR RNA ELEMENT OF HIV-1 AND A LNA MODIFIED APTAMER | I.LEBARS,T.RICHARD,C.DI PRIMO,J.-J.TOULME | 2OOM Compare |
1XWU | FR3D | A | 16 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF ACAUAGA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
1ZBH | FR3D | F | 32 | 10 | 3.0 | 9-26-06 | synthetic | '-END SPECIFIC RECOGNITION OF HISTONE MRNA STEM-LOOP BY 3'- EXONUCLEASE | Y.CHENG,D.J.PATEL | |
3AGV | FR3D | SU | 25 | 2 | 2.1 | 11-10-10 | synthetic | CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX | Y.NOMURA,S.SUGIYAMA,T.SAKAMOTO,S.MIYAKAWA,H.ADACHI,K.TAKANO, S.MURAKAMI,T.INOUE,Y.MORI,Y.NAKAMURA,H.MATSUMURA | |
1T0K | FR3D | CD | 27 | 11 | 3.2 | 7-20-04 | synthetic,synthetic | JOINT X-RAY AND NMR REFINEMENT OF YEAST L30E-MRNA COMPLEX | J.A.CHAO,J.R.WILLIAMSON | |
2L9E | FR3D | A | 15 | 5 | SOLUTION NMR | 3-02-11 | synthetic | SOLUTION STRUCTURE OF THE HUMAN ANTI-CODON STEM AND LOOP(HASL) OF TRANSFER RNA LYSINE 3 (TRNALYS3) | F.A.P.VENDEIX,F.V.MURPHY IV,W.CANTARA,G.LESZCZYNSKA,E.M.GUSTILO, B.SPROAT,A.A.P.MALKIEWICZ,P.F.AGRIS | |
3DD2 | FR3D | B | 15 | 3 | 1.9 | 11-11-08 | synthetic | CRYSTAL STRUCTURE OF AN RNA APTAMER BOUND TO HUMAN THROMBIN | S.B.LONG,B.A.SULLENGER | |
2IZN | FR3D | R | 26 | 8 | 2.6 | 7-27-06 | ENTEROBACTERIO PHAGE MS2 | MS2-RNA HAIRPIN (G-10) COMPLEX | C.HELGSTRAND,E.GRAHN,T.MOSS,N.J.STONEHOUSE,K.TARS, P.G.STOCKLEY,L.LILJAS | |
2AZ2 | FR3D | CD | 30 | 12 | 2.6 | 10-11-05 | synthetic | FLOCK HOUSE VIRUS B2-DSRNA COMPLEX (P4122) | J.A.CHAO,J.H.LEE,B.R.CHAPADOS,E.W.DEBLER,A.SCHNEEMANN, J.R.WILLIAMSON | 2AZ0 Compare |
1XWP | FR3D | A | 15 | 5 | SOLUTION NMR | 2-15-05 | synthetic | SOLUTION STRUCTURE OF AUCGCA LOOP | T.SAKAMOTO,A.OGURO,G.KAWAI,T.OHTSU,Y.NAKAMURA | |
1QFQ | FR3D | A | 435 | 145 | SOLUTION NMR | 4-20-99 | ENTEROBACTERIA PHAGE LAMBDA | BACTERIOPHAGE LAMBDA N-PROTEIN-NUTBOXB-RNA COMPLEX | M.SCHAERPF,H.STICHT,P.ROESCH | 1HJI Compare |
1DUQ | FR3D | AB | 104 | 44 | 2.1 | 5-16-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1 | L.-W.HUNG,E.L.HOLBROOK,S.R.HOLBROOK | 1CSL Compare |
2KOC | FR3D | A | 280 | 120 | SOLUTION NMR | 12-01-09 | synthetic | NMR SOLUTION STRUCTURE OF A 14-MER HAIRPIN RNA WITH CUUCGG TETRALOOP | S.NOZINOVIC,B.FUERTIG,H.R.A.JONKER,C.RICHTER,H.SCHWALBE | 1Q75 Compare |
1OQ0 | FR3D | A | 300 | 120 | SOLUTION NMR | 5-13-03 | synthetic | P6.1 STEM LOOP FROM THE ACTIVATION DOMAIN OF HTR | T.LEEPER,N.LEULLIOT,G.VARANI | |
2F8K | FR3D | B | 15 | 6 | 2.0 | 1-24-06 | synthetic | SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1 | T.AVIV,Z.LIN,G.BEN-ARI,C.A.SMIBERT,F.SICHERI | |
1A4T | FR3D | A | 300 | 115 | SOLUTION NMR | 4-29-98 | synthetic | SOLUTION STRUCTURE OF PHAGE P22 N PEPTIDE-BOX B RNA COMPLEX, NMR, 20 STRUCTURES | Z.CAI,A.A.GORIN,R.FREDERICK,X.YE,W.HU,A.MAJUMDAR,A.KETTANI, D.J.PATEL | |
1KOD | FR3D | AB | 25 | 6 | SOLUTION NMR | 11-08-96 | synthetic,synthetic | RNA APTAMER COMPLEXED WITH CITRULLINE, NMR | Y.S.YANG,M.KOCHOYAN,P.BURGSTALLER,E.WESTHOF,M.FAMULOK | 1KOC Compare |
1G2J | FR3D | A | 14 | 6 | 2.0 | 12-06-00 | synthetic | RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE | G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN, L.BEIGELMAN,M.EGLI | |
1F85 | FR3D | A | 280 | 68 | SOLUTION NMR | 11-17-00 | synthetic | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE | P.J.LUKAVSKY,G.A.OTTO,A.M.LANCASTER,P.SARNOW,J.D.PUGLISI | |
1TFY | FR3D | FI | 73 | 30 | 3.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1ROQ | FR3D | A | 140 | 58 | SOLUTION NMR | 5-18-04 | synthetic | EXTENDING THE FAMILY OF UNCG-LIKE TETRALOOP MOTIFS: NMR STRUCTURE OF A CACG TETRALOOP FROM COXSACKIEVIRUS B3 | Z.DU,J.YU,R.ANDINO,T.L.JAMES | |
2RQJ | FR3D | AB | 216 | 146 | SOLUTION NMR | 11-17-09 | synthetic | QUADRUPLEX STRUCTURE OF AN RNA APTAMER AGAINST BOVINE PRION PROTEIN | M.KATAHIRA,T.MASHIMA,A.MATSUGAMI,F.NISHIKAWA,S.NISHIKAWA | 1MY9 Compare |
2B3J | FR3D | E | 28 | 7 | 2.0 | 1-24-06 | synthetic | CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TRNA ADENOSINE DEAMINASE, TADA, IN COMPLEX WITH RNA | H.C.LOSEY,A.J.RUTHENBURG,G.L.VERDINE | |
433D | FR3D | AB | 28 | 14 | 2.1 | 12-04-98 | synthetic | CRYSTAL STRUCTURE OF A 14 BASE PAIR RNA DUPLEX WITH NONSYMMETRICAL TANDEM G.U WOBBLE BASE PAIRS | J.TRIKHA,D.J.FILMAN,J.M.HOGLE | 2BJ6 Compare |
2I91 | FR3D | CD | 22 | 7 | 2.6 | 10-17-06 | synthetic,synthetic | KDA RO AUTOANTIGEN IN COMPLEX WITH A FRAGMENT OF MISFOLDED RNA | K.M.REINISCH,A.J.STEIN | |
1IK1 | FR3D | A | 14 | 5 | SOLUTION NMR | 7-18-01 | synthetic | SOLUTION STRUCTURE OF AN RNA HAIRPIN FROM HRV-14 | H.HUANG,A.ALEXANDROV,X.CHEN,T.W.BARNES III,H.ZHANG,K.DUTTA, S.M.PASCAL | |
2EVY | FR3D | A | 252 | 90 | SOLUTION NMR | 8-22-06 | synthetic | GNYA TETRANUCLEOTIDE LOOPS FOUND IN POLIOVIRUS ORIL BY IN VIVO SELEX (UN)EXPECTEDLY FORM A YNMG-LIKE STRUCTURE | W.J.G.MELCHERS,J.ZOLL,M.TESSARI,D.V.BAKHMUTOV,A.P.GMYL, V.I.AGOL,H.A.HEUS | |
3OIN | FR3D | C | 14 | 4 | 1.9 | 12-01-10 | synthetic | CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NEP1/EMG1 BOUND TO S- ADENOSYLHOMOCYSTEINE AND 1 MOLECULE OF COGNATE RNA | S.R.THOMAS,N.LARONDE-LEBLANC | 3OIJ Compare |
1K4B | FR3D | A | 280 | 100 | SOLUTION NMR | 12-19-01 | synthetic | STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES | H.WU,P.K.YANG,S.E.BUTCHER,S.KANG,G.CHANFREAU,J.FEIGON | |
6MSF | FR3D | RS | 24 | 8 | 2.8 | 7-08-98 | ENTEROBACTERIO PHAGE MS2,synthetic | F6 APTAMER MS2 COAT PROTEIN COMPLEX | M.A.CONVERY,S.ROWSELL,N.J.STONEHOUSE,A.D.ELLINGTON,I.HIRAO, J.B.MURRAY,D.S.PEABODY,S.E.V.PHILLIPS,P.G.STOCKLEY | |
1C0O | FR3D | A | 266 | 109 | SOLUTION NMR | 8-31-99 | TETRAHYMENA THERMOPHILA | SOLUTION STRUCTURE OF THE P5 HAIRPIN FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, 19 CONVERGED STRUCTURES | G.COLMENAREJO,I.TINOCO JR. | |
1FHK | FR3D | A | 210 | 80 | SOLUTION NMR | 3-21-01 | synthetic | NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI | S.V.MOROSYUK,P.R.CUNNINGHAM,J.SANTALUCIA JR. | |
1MHK | FR3D | LS | 26 | 9 | 2.5 | 9-06-02 | synthetic,synthetic | CRYSTAL STRUCTURE ANALYSIS OF A 26MER RNA MOLECULE, REPRESENTING A NEW RNA MOTIF, THE HOOK-TURN | S.SZEP,J.WANG,P.B.MOORE | |
2R93 | FR3D | R | 14 | 6 | 4.0 | 11-27-07 | synthetic | ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP | E.LEHMANN,F.BRUECKNER,P.CRAMER | |
7MSF | FR3D | R | 25 | 8 | 2.8 | 11-11-98 | ENTEROBACTERIO PHAGE MS2 | MS2 PROTEIN CAPSID/RNA COMPLEX | S.ROWSELL,N.J.STONEHOUSE,M.A.CONVERY,C.J.ADAMS, A.D.ELLINGTON,I.HIRAO,D.S.PEABODY,P.G.STOCKLEY, S.E.V.PHILLIPS | |
1L3Z | FR3D | A | 14 | 6 | 2.0 | 2-25-03 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER | K.SHI,B.PAN,M.SUNDARALINGAM | |
1HS2 | FR3D | A | 13 | 4 | SOLUTION NMR | 8-29-01 | synthetic | SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAGU AS PART OF HAIRPIN R(GCGUUAAGUCGCA) | H.ZHANG,M.A.FOUNTAIN,T.R.KRUGH | 1HS8 1HS3 1HS4 1HS1 Compare |
1NUJ | FR3D | CDEF | 96 | 37 | 1.8 | 8-19-03 | synthetic,synthetic | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | J.E.WEDEKIND,D.B.MCKAY | 1NUV Compare |
1VOP | FR3D | A | 429 | 165 | SOLUTION NMR | 12-24-97 | synthetic | CONSERVED RNA COMPONENT OF THE PEPTIDYL TRANSFERASE CENTER, NMR, 33 STRUCTURES | E.V.PUGLISI,J.D.PUGLISI | |
1JZC | FR3D | A | 13 | 3 | SOLUTION NMR | 10-07-03 | synthetic | THE SOLUTION STRUCTURE OF THE MUTANT 5'AUG3' TRILOOP IN THE RNA PROMOTER REGION OF THE BROME MOSAIC VIRUS GENOMIC (+)- RNA | C.-H.KIM,C.C.KAO | |
1I4C | FR3D | A | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MINOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
1AM0 | FR3D | A | 128 | 19 | SOLUTION NMR | 7-23-97 | synthetic | AMP RNA APTAMER COMPLEX, NMR, 8 STRUCTURES | F.JIANG,R.A.KUMAR,R.A.JONES,D.J.PATEL | |
1FUF | FR3D | AB | 26 | 12 | 1.7 | 11-09-01 | synthetic | CRYSTAL STRUCTURE OF A 14BP RNA OLIGONUCLEOTIDE CONTAINING DOUBLE UU BULGES: A NOVEL INTRAMOLECULAR U*(AU) BASE TRIPLE | J.DENG,Y.XIONG,C.SUDARSANAKUMAR,K.SHI,M.SUNDARALINGAM | 1IK5 Compare |
1TFW | FR3D | EH | 51 | 19 | 2.2 | 8-10-04 | synthetic,synthetic,synthetic,synthetic | HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE | Y.XIONG,T.A.STEITZ | |
1I46 | FR3D | A | 13 | 4 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MUTANT STEM LOOP C 5'GUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | C.-H.KIM,I.TINOCO JR. | |
1K8S | FR3D | AB | 25 | 12 | SOLUTION NMR | 11-14-01 | synthetic,synthetic | BULGED ADENOSINE IN AN RNA DUPLEX | V.THIVIYANATHAN,A.B.GULIAEV,N.B.LEONTIS,D.G.GORENSTEIN | |
1I4B | FR3D | A | 13 | 5 | SOLUTION NMR | 4-21-01 | synthetic | THE SOLUTION STRUCTURE OF THE MAJOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | I.TINOCO JR.,C.-H.KIM | |
2R22 | FR3D | AB | 26 | 13 | 1.4 | 9-25-07 | synthetic | STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN) | Y.TIMSIT,S.BOMBARD | 2R21 2R1S 2R20 Compare |
3MQK | FR3D | DE | 22 | 5 | 2.8 | 12-29-10 | synthetic,synthetic | CBF5-NOP10-GAR1 COMPLEX BINDING WITH 17MER RNA CONTAINING ACA TRINUCLEOTIDE | J.ZHOU,B.LIANG,H.LI | |
1ESH | FR3D | A | 13 | 6 | SOLUTION NMR | 4-24-00 | synthetic | THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA | C.-H.KIM,C.C.KAO,I.TINOCO JR. | |
429D | FR3D | CD | 48 | 16 | 2.7 | 3-01-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS | J. E.WEDEKIND,D. B.MCKAY | |
1ELH | FR3D | AB | 150 | 59 | SOLUTION NMR | 1-31-94 | ESCHERICHIA COLI,ESCHERICHIA COLI | NMR ANALYSIS OF HELIX I FROM THE 5S RNA OF ESCHERICHIA COLI | S.WHITE,P.MOORE | |
1I9X | FR3D | AB | 26 | 12 | 2.2 | 9-05-01 | synthetic | CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX | J.A.BERGLUND,M.ROSBASH,S.C.SCHULTZ | |
1ZSE | FR3D | R | 12 | 4 | 3.0 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | 2BS1 2BS0 Compare |
354D | FR3D | AB | 22 | 8 | 1.5 | 11-26-97 | ESCHERICHIA COLI,ESCHERICHIA COLI | STRUCTURE OF LOOP E FROM E. COLI 5S RRNA | C.C.CORRELL,B.FREEBORN,P.B.MOORE,T.A.STEITZ | |
3CJZ | FR3D | AB | 24 | 10 | 1.8 | 10-14-08 | synthetic | EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS | P.S.PALLAN,C.KREUTZ,S.BOSIO,R.MICURA,M.EGLI | |
1ZIG | FR3D | A | 120 | 50 | SOLUTION NMR | 3-12-97 | synthetic | GAGA RNA TETRALOOP, NMR, 10 STRUCTURES | F.M.JUCKER,H.A.HEUS,P.F.YIP,E.MOORS,A.PARDI | 1ZIH 1ZIF Compare |
1AFX | FR3D | A | 156 | 60 | SOLUTION NMR | 5-15-97 | synthetic | UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES | S.E.BUTCHER,T.DIECKMANN,J.FEIGON | |
1SDR | FR3D | AB | 48 | 24 | 2.6 | 2-27-95 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE | H.SCHINDELIN,M.ZHANG,R.BALD,J.-P.FUERSTE,V.A.ERDMANN, U.HEINEMANN | |
1AJL | FR3D | AB | 19 | 6 | SOLUTION NMR | 7-07-97 | TETRAHYMENA THERMOPHILA,TETRAHYMENA THERMOPHILA | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
2KBP | FR3D | AB | 240 | 98 | SOLUTION NMR | 3-24-09 | synthetic | SOLUTION STRUCTURE OF A G-QUADRUPLEX OF HUMAN TELOMERIC RNA | A.T.PHAN,H.MARTADINATA | |
2K7E | FR3D | AB | 220 | 98 | SOLUTION NMR | 10-07-08 | synthetic,synthetic | NMR STRUCTURE OF THE HUMAN TRNALYS3 BOUND TO THE HIV GENOME LOOP I | Y.BILBILLE,F.P.A.VENDEIX,R.GUENTHER,A.MALKIEWICZ,X.ARIZA, J.VILARRASA,P.AGRIS | |
3FTM | FR3D | AB | 46 | 18 | 2.7 | 2-24-09 | synthetic,synthetic | CLASS II LIGASE RIBOZYME PRODUCT-TEMPLATE DUPLEX, STRUCTURE 1 | J.N.PITT,A.R.FERRE-D'AMARE | 3FS0 Compare |
1AJT | FR3D | AB | 19 | 4 | SOLUTION NMR | 8-20-97 | synthetic,synthetic | FIVE-NUCLEOTIDE BULGE LOOP FROM TETRAHYMENA THERMOPHILA GROUP I INTRON, NMR, 1 STRUCTURE | K.J.LUEBKE,S.M.LANDRY,I.TINOCO JUNIOR | |
1RNG | FR3D | A | 60 | 24 | SOLUTION NMR | 12-07-95 | synthetic | SOLUTION STRUCTURE OF THE CUUG HAIRPIN: A NOVEL RNA TETRALOOP MOTIF | F.M.JUCKER,A.PARDI | |
1B7F | FR3D | PQ | 24 | 2 | 2.6 | 5-03-99 | synthetic | SXL-LETHAL PROTEIN/RNA COMPLEX | N.HANDA,O.NUREKI,K.KURIMOTO,I.KIM,H.SAKAMOTO,Y.SHIMURA, Y.MUTO,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) | |
2F87 | FR3D | A | 156 | 52 | SOLUTION NMR | 8-08-06 | synthetic | SOLUTION STRUCTURE OF A GAAG TETRALOOP IN SRP RNA FROM PYROCOCCUS FURIOSUS | K.OKADA,M.TAKAHASHI,T.SAKAMOTO,K.NAKAMURA,A.KANAI,G KAWAI | |
1KD5 | FR3D | AB | 22 | 10 | 1.6 | 3-04-03 | synthetic | THE CRYSTAL STRUCTURE OF R(GGUCACAGCCC)2 METAL FREE FORM | V.KACER,S.A.SCARINGE,J.N.SCARSDALE,J.P.RIFE | 2DD1 2DD2 2DD3 1XV0 1KD4 1KD3 Compare |
1QCU | FR3D | AB | 44 | 22 | 1.2 | 11-11-99 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN 18 BASE PAIR COPY CONTROL RELATED RNA DUPLEX | P.S.KLOSTERMAN,S.A.SHAH,T.A.STEITZ | |
3LRR | FR3D | CD | 22 | 9 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF HUMAN RIG-I CTD BOUND TO A 12 BP AU RICH 5' PPP DSRNA | P.LI | |
1I3Y | FR3D | A | 378 | 146 | SOLUTION NMR | 4-04-01 | synthetic | SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA. | J.D.PUGLISI,S.C.BLANCHARD | |
1LNT | FR3D | AB | 22 | 11 | 1.7 | 6-03-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP | J.DENG,Y.XIONG,B.PAN,M.SUNDARALINGAM | |
1TUT | FR3D | AB | 22 | 11 | SOLUTION NMR | 12-28-04 | synthetic,synthetic | J4/5 LOOP FROM THE CANDIDA ALBICANS AND CANDIDA DUBLINIENSIS GROUP I INTRONS | B.M.ZNOSKO,S.D.KENNEDY,P.C.WILLE,T.R.KRUGH,D.H.TURNER | |
1YZ9 | FR3D | CDEF | 44 | 20 | 2.1 | 11-22-05 | synthetic | CRYSTAL STRUCTURE OF RNASE III MUTANT E110Q FROM AQUIFEX AEOLICUS COMPLEXED WITH DOUBLE STRANDED RNA AT 2.1- ANGSTROM RESOLUTION | J.GAN,J.E.TROPEA,B.P.AUSTIN,D.L.COURT,D.S.WAUGH,X.JI | |
1WTS | FR3D | A | 11 | 5 | SOLUTION NMR | 1-27-99 | synthetic | HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE | J.P.RIFE,P.B.MOORE | 1ATV Compare |
3IBK | FR3D | AB | 22 | 12 | 2.2 | 5-12-10 | synthetic | CRYSTAL STRUCTURE OF A TELOMERIC RNA QUADRUPLEX | G.W.COLLIE,S.NEIDLE,G.N.PARKINSON | |
2AWQ | FR3D | A | 160 | 38 | SOLUTION NMR | 1-17-06 | synthetic | SOLUTION STRUCTURE OF PSEUDOURIDINE-32 MODIFIED ANTICODON STEM-LOOP OF E. COLI TRNAPHE | J.CABELLO-VILLEGAS,E.P.NIKONOWICZ | |
1LMV | FR3D | AB | 190 | 86 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE UNMODIFIED U2 SNRNA-INTRON BRANCH SITE HELIX FROM S. CEREVISIAE | M.I.NEWBY,N.L.GREENBAUM | 3HO1 3HVR 3HM9 3HJF 3HK2 Compare |
2JSG | FR3D | A | 176 | 59 | SOLUTION NMR | 8-07-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E.COLI TRNA-VAL3 WITH 1 MODIFICATION (M6A37) | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
1FEQ | FR3D | A | 176 | 59 | SOLUTION NMR | 11-22-00 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF TRNA(LYS3) WITH T6A MODIFICATION AT POSITION 37 | J.W.STUART,Z.GDANIEC,R.H.GUENTHER,M.MARSZALEK,E.SOCHACKA, A.MALKIEWICZ,P.F.AGRIS | |
3HGA | FR3D | X | 10 | 4 | 1.3 | 8-18-09 | synthetic | CRYSTAL STRUCTURE OF 4-SE-URIDINE DERIVATIZED RNA | JIA SHENG,SOARES ALEXEI,ZHEN HUANG | |
1F5G | FR3D | AB | 520 | 260 | SOLUTION NMR | 6-26-00 | synthetic | THE G7(SYN)-G4(ANTI) STRUCTURE OF R(GCAGGCGUGC)2 | M.E.BURKARD,D.H.TURNER | 1F5H Compare |
1DQH | FR3D | AB | 19 | 9 | 1.7 | 11-13-00 | synthetic,synthetic | CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS | Y.XIONG,M.SUNDARALINGAM | 1DQF Compare |
1IDV | FR3D | A | 100 | 24 | SOLUTION NMR | 10-05-01 | synthetic | NMR STRUCTURE OF HCV IRES RNA DOMAIN IIIC | K.KALUARACHCHI,R.RIJNBRAND,S.M.LEMON,D.G.GORENSTEIN | |
2G1G | FR3D | A | 320 | 100 | SOLUTION NMR | 6-20-06 | synthetic | SOLUTION STRUCTURE OF THE ANTICODON LOOP OF S. POMBE TRNAI INCLUDING THE NATURALLY OCCURRING N6-THREONYL ADENINE | E.LESCRINIER | |
3ADI | FR3D | DE | 20 | 9 | 3.2 | 5-26-10 | synthetic,synthetic | STRUCTURE OF ARABIDOPSIS HYL1 AND ITS MOLECULAR IMPLICATIONS FOR MIRNA PROCESSING | Y.A.YUAN,H.Y.CHEN | |
1LPW | FR3D | AB | 162 | 76 | SOLUTION NMR | 11-27-02 | SACCHAROMYCES CEREVISIAE,SACCHAROMYCES CEREVISIAE | SOLUTION STRUCTURE OF THE YEAST SPLICEOSOMAL U2 SNRNA- INTRON BRANCH SITE HELIX FEATURING A CONSERVED PSEUDOURIDINE | M.I.NEWBY,N.L.GREENBAUM | |
3BSO | FR3D | PT | 16 | 7 | 1.7 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO CYTIDINE 5'-TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | 3H5X 3H5Y Compare |
2L8U | FR3D | AB | 18 | 8 | SOLUTION NMR | 2-23-11 | synthetic | NMR SPECTROSCOPY AND MOLECULAR DYNAMICS SIMULATION OF R(CCGCUGCGG)2 REVEAL A DYNAMIC UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH ONE HYDROGEN BOND PAIR | R.PARKESH,M.A.FOUNTAIN,M.D.DISNEY | |
2IRN | FR3D | AB | 270 | 116 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
2JRQ | FR3D | A | 176 | 56 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 1 MODIFICATION (CMO5U34) | F.A.P.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
1ZH5 | FR3D | CD | 18 | 4 | 1.9 | 1-17-06 | synthetic | STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3'-TERMINII OF NASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN | M.TEPLOVA,Y.R.YUAN,S.ILIN,L.MALININA,A.T.PHAN,A.TEPLOV, D.J.PATEL | 1YTY Compare |
1G2E | FR3D | B | 9 | 1 | 2.3 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA | X.WANG,T.M.T.HALL | |
2KY2 | FR3D | AB | 180 | 80 | SOLUTION NMR | 6-02-10 | synthetic | THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'UAGG/3'GGAU | N.B.HAMMOND,S.D.KENNEDY,D.H.TURNER | |
1YVP | FR3D | CDG | 21 | 5 | 2.2 | 6-07-05 | synthetic,synthetic | RO AUTOANTIGEN COMPLEXED WITH RNAS | A.J.STEIN,G.FUCHS,C.FU,S.L.WOLIN,K.M.REINISCH | |
2KRY | FR3D | A | 150 | 40 | SOLUTION NMR | 8-18-10 | synthetic | SOLUTION STRUCTURE OF THE HUMAN MITOCHONDRIAL TRNAMET ASL CONTAINING THE 5-FORMYLCYTIDINE MODIFICATION IN POSITION 34 | Y.BILBILLE,P.F.AGRIS | |
2H49 | FR3D | AB | 360 | 160 | SOLUTION NMR | 11-21-06 | synthetic,synthetic | THE NMR STRUCTURE OF AN INTERNAL LOOP FROM 23S RIBOSOMAL RNA OF DEINOCOCCUS RADIODURANS DIFFERS FROM THE STRUCTURE IN THE CRYSTAL OF THE RIBOSOMAL SUBUNIT | N.SHANKAR | |
2AO5 | FR3D | AB | 36 | 16 | 2.1 | 3-28-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX R(GGCGBRUGCGCU)2 WITH TERMINAL AND INTERNAL TANDEM G-U BASE PAIRS | R.UTSUNOMIYA,K.SUTO,D.BALASUNDARESAN,A.FUKAMIZU,P.K.KUMAR, H.MIZUNO | |
1MUV | FR3D | AB | 18 | 8 | SOLUTION NMR | 12-18-02 | synthetic | SHEARED A(ANTI)-A(ANTI) BASE PAIRS IN A DESTABILIZING 2X2 INTERNAL LOOP: THE NMR STRUCTURE OF 5'(RGGCAAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,S.J.SCHROEDER,T.R.KRUGH,D.H.TURNER | |
2IRO | FR3D | AB | 270 | 105 | SOLUTION NMR | 2-20-07 | synthetic | THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2 | B.S.TOLBERT | |
2K41 | FR3D | AB | 170 | 80 | SOLUTION NMR | 11-04-08 | synthetic,synthetic | NMR STRUCTURE OF URIDINE BULGED RNA DUPLEX | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
2KRV | FR3D | A | 150 | 50 | SOLUTION NMR | 12-01-10 | synthetic | SOLUTION STRUCTURE OF THE E. COLI TRNA-ARG1 (ICG) ASL CONTAINING THE 2-THIOCYTIDINE MODIFICATION | Y.BILBILLE,P.F.AGRIS | |
2L8W | FR3D | AB | 18 | 9 | SOLUTION NMR | 2-23-11 | synthetic | R(CCGCUGCGG)2 UU INTERNAL LOOP FOUND IN MYOTONIC DYSTROPHY TYPE 1 - UU PAIR WITH TWO HYDROGEN BOND PAIRS | R.PARKESH,M.FOUNTAIN,M.DISNEY | 2L8C Compare |
1C4L | FR3D | AB | 18 | 9 | SOLUTION NMR | 8-09-00 | synthetic,synthetic | SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE- PAIR | Y.TANAKA,C.KOJIMA,T.YAMAZAKI,T.S.KODAMA,K.YASUNO, S.MIYASHITA,A.M.ONO,A.S.ONO,M.KAINOSHO,Y.KYOGOKU | |
2B2D | FR3D | R | 12 | 3 | 2.9 | 5-09-06 | ENTEROBACTERIO PHAGE MS2 | RNA STEMLOOP OPERATOR FROM BACTERIOPHAGE QBETA COMPLEXED WITH AN N87S,E89K MUTANT MS2 CAPSID | W.T.HORN,K.TARS,E.GRAHN,C.HELGSTRAND,A.J.BARON,H.LAGO, C.J.ADAMS,D.S.PEABODY,S.E.V.PHILLIPS,N.J.STONEHOUSE, L.LILJAS,P.G.STOCKLEY | |
2E9Z | FR3D | BC | 16 | 4 | 3.0 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, ATP AND UTP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
2E9R | FR3D | AB | 15 | 6 | 2.8 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND WITH RIBAVIRIN | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
2K3Z | FR3D | AB | 170 | 87 | SOLUTION NMR | 11-04-08 | synthetic,synthetic | NMR STRUCTURE OF ADENOSINE BULGED RNA DUPLEX WITH C:G-A TRIPLE | L.POPENDA,L.BIELECKI,Z.GDANIEC,R.W.ADAMIAK | |
2G91 | FR3D | AB | 15 | 6 | 1.5 | 4-03-07 | synthetic | CRYSTAL STRUCTURE ANALYSIS OF THE AN RNA NONAMER R(GGUGCGC) D(BRC)R(C) | K.SHI,B.PAN,M.SUNDARALINGAM | |
2KD4 | FR3D | AB | 16 | 8 | SOLUTION NMR | 4-07-09 | synthetic | SOLUTION STRUCTURE AND THERMODYNAMICS OF 2',5' RNA INTERCALATION | E.D.HOROWITZ,S.LILAVIVAT,B.W.HOLLADAY,M.W.GERMANN,N.V.HUD | |
2GQ6 | FR3D | KL | 32 | 16 | 1.3 | 6-27-06 | synthetic,synthetic | CRYSTAL STRUCTURE OF AN RNA RACEMATE | W.RYPNIEWSKI,M.VALLAZZA,M.PERBANDT,S.KLUSSMANN,C.BETZEL, V.A.ERDMANN | 2GQ5 2G32 2GQ7 2GQ4 2GPM Compare |
1MV2 | FR3D | AB | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, FACE-TO-FACE AP PAIRS IN 5'(RGGCAPGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
2BGG | FR3D | PQ | 29 | 10 | 2.2 | 3-31-05 | synthetic,synthetic | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX. | J.S.PARKER,S.M.ROE,D.BARFORD | |
1QET | FR3D | AB | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | |
1MIS | FR3D | AB | 16 | 8 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RNA (5'-R(GP*CP*GP*GP*AP*CP*GP*C)-3') ANTI- PARALLEL RNA DUPLEX WITH TANDEM G:A MISMATCHES, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,D.H.TURNER | |
2E9T | FR3D | BC | 28 | 12 | 2.6 | 6-26-07 | synthetic,synthetic | FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE RNA DEPENDENT IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND 5F-UTP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
1JZV | FR3D | ABCD | 30 | 15 | 1.7 | 11-11-03 | synthetic,synthetic | CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA | Y.XIONG,C.SUDARSANAKUMAR,J.DENG,B.PAN,M.SUNDARALINGAM | |
402D | FR3D | AB | 16 | 8 | 2.3 | 6-16-98 | synthetic | '-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' | S.B.JANG,L.-W.HUNG,Y.-I.CHI,E.L.HOLBROOK,R.CARTER, S.R.HOLBROOK | |
2OJ8 | FR3D | A | 80 | 30 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP OF THE HEPATITIS B VIRUS | F.C GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
1GUC | FR3D | AB | 480 | 240 | SOLUTION NMR | 2-12-97 | synthetic | SOLUTION NMR STRUCTURE OF AN RNA WITH TANDEM, SYMMETRIC GU MISMATCHES, 30 STRUCTURES | J.A.MCDOWELL,D.H.TURNER | |
2IXZ | FR3D | A | 96 | 24 | SOLUTION NMR | 9-06-06 | synthetic | SOLUTION STRUCTURE OF THE APICAL STEM-LOOP OF THE HUMAN HEPATITIS B VIRUS ENCAPSIDATION SIGNAL | S.FLODELL,M.PETERSEN,F.GIRARD,J.ZDUNEK,K.KIDD-LJUNGGREN, J.SCHLEUCHER,S.S.WIJMENGA | |
1MV1 | FR3D | AB | 16 | 6 | SOLUTION NMR | 12-18-02 | synthetic | THE TANDEM, SHEARED PA PAIRS IN 5'(RGGCPAGCCU)2 | B.M.ZNOSKO,M.E.BURKARD,T.R.KRUGH,D.H.TURNER | |
398D | FR3D | AB | 24 | 8 | 1.9 | 10-06-98 | synthetic | '-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS- STRAND SYNTHESIS OF HIV REPLICATION | U.MUELLER,G.MEIER,A.MOCHI-ONORI,L.CELLAI,H.HEUMANN | |
1MWG | FR3D | AB | 16 | 8 | SOLUTION NMR | 3-12-97 | synthetic | STRUCTURE OF RIBONUCLEIC ACID, NMR, MINIMIZED AVERAGE STRUCTURE | M.WU,J.SANTALUCIA,D.H.TURNER | |
472D | FR3D | AB | 16 | 8 | 1.9 | 11-27-00 | synthetic,synthetic | STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS | J.DENG,M.SUNDARALINGAM | |
3GLP | FR3D | AB | 40 | 12 | 1.2 | 5-26-09 | synthetic | .23 A RESOLUTION X-RAY STRUCTURE OF (GCUGCUGC)2 | A.KILISZEK,R.KIERZEK,W.J.KRZYZOSIAK,W.RYPNIEWSKI | |
259D | FR3D | AB | 16 | 8 | 1.5 | 8-26-96 | synthetic | RNA HYDRATION: A DETAILED LOOK | M.EGLI,S.PORTMANN,N.USMAN | 1RXB Compare |
2OJ7 | FR3D | A | 80 | 21 | SOLUTION NMR | 5-22-07 | synthetic | NMR STRUCTURE OF THE UGUU TETRALOOP OF DUCK EPSILON APICAL STEM LOOP | F.C.GIRARD,O.M.OTTINK,K.A.M.AMPT,M.TESSARI,S.S.WIJMENGA | |
2GBH | FR3D | A | 75 | 35 | SOLUTION NMR | 4-11-06 | synthetic | NMR STRUCTURE OF STEM REGION OF HELIX-35 OF 23S E.COLI RIBOSOMAL RNA (RESIDUES 736-760) | A.BAX,J.BOISBOUVIER,D.BRYCE,A.GRISHAEV,C.JARONIEC,E.MICLET, E.NIKONOVICZ,E.O'NEIL-CABELLO,J.YING | |
2G3S | FR3D | AB | 80 | 40 | 1.5 | 1-16-07 | synthetic | RNA STRUCTURE CONTAINING GU BASE PAIRS | S.B.JANG,L.W.HUNG,M.S.JEONG,E.L.HOLBROOK,X.CHEN,D.H.TURNER, S.R.HOLBROOK | |
1EKD | FR3D | AB | 16 | 8 | SOLUTION NMR | 11-13-00 | synthetic | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | X.CHEN,J.A.MCDOWELL,R.KIERZEK,T.R.KRUGH,D.H.TURNER | |
3BSN | FR3D | PT | 16 | 6 | 1.8 | 1-08-08 | synthetic,synthetic | NORWALK VIRUS POLYMERASE BOUND TO 5-NITROCYTIDINE TRIPHOSPHATE AND PRIMER-TEMPLATE RNA | D.F.ZAMYATKIN,K.K.S.NG | |
1N35 | FR3D | BC | 13 | 5 | 2.5 | 12-25-02 | synthetic,synthetic | LAMBDA3 ELONGATION COMPLEX WITH FOUR PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | 1UON Compare |
1YFV | FR3D | AB | 16 | 8 | SOLUTION NMR | 10-15-97 | synthetic | STRUCTURE OF (5'-R(GP*GP*CP*GP*AP*GP*CP*C)-3')2 BY 2-D NMR, 1 STRUCTURE | J.SANTALUCIA JUNIOR,D.H.TURNER | 1SA9 Compare |
1ZDJ | FR3D | R | 16 | 4 | 2.9 | 7-08-98 | ENTEROBACTERIO PHAGE MS2 | STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX | E.GRAHN,N.STONEHOUSE,K.VALEGARD,S.VANDENWORM,L.LILJAS | |
439D | FR3D | AB | 16 | 8 | 1.6 | 9-14-01 | synthetic,synthetic | '-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R(*CP*CP*GP*CP*CP*UP*GP*G)-3' | M.PERBANDT,S.LORENZ,M.VALLAZZA,V.A.ERDMANN,C.BETZEL | |
1J9H | FR3D | AB | 32 | 16 | 1.4 | 10-26-01 | synthetic | CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES | Y.XIONG,J.DENG,C.SUDARSANAKUMAR,M.SUNDARALINGAM | |
438D | FR3D | AB | 16 | 8 | 2.5 | 5-12-99 | synthetic | STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS | K.SHI,M.C.WAHL,M.SUNDARALINGAM | |
1BYX | FR3D | AB | 240 | 61 | SOLUTION NMR | 10-20-99 | synthetic | CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION | T.SZYPERSKI,M.GOETTE,M.BILLETER,E.PEROLA,L.CELLAI | |
1WNE | FR3D | BC | 13 | 4 | 3.0 | 8-31-04 | synthetic,synthetic | FOOT AND MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH A TEMPLATE-PRIMER RNA | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
1EKA | FR3D | AB | 16 | 8 | SOLUTION NMR | 11-13-00 | synthetic | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | X.CHEN,J.A.MCDOWELL,R.KIERZEK,T.R.KRUGH,D.H.TURNER | |
1FXL | FR3D | B | 8 | 1 | 1.8 | 2-05-01 | synthetic | CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA | X.WANG,T.M.T.HALL | |
2EC0 | FR3D | BC | 30 | 14 | 2.8 | 6-26-07 | synthetic,synthetic | RNA-DEPENDENT RNA POLYMERASE OF FOOT-AND-MOUTH DISEASE VIRUS IN COMPLEX WITH A TEMPLATE-PRIMER RNA AND ATP | C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO, N.VERDAGUER | |
3EQT | FR3D | CD | 16 | 8 | 2.0 | 3-10-09 | synthetic | CRYSTAL STRUCTURE OF HUMAN LGP2 C-TERMINAL DOMAIN IN COMPLEX WITH DSRNA | P.LI,X.LI | |
1QES | FR3D | AB | 480 | 240 | SOLUTION NMR | 6-05-97 | synthetic | TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES | J.A.MCDOWELL,L.HE,X.CHEN,D.H.TURNER | |
165D | FR3D | AB | 16 | 8 | 1.6 | 8-31-94 | synthetic | THE STRUCTURE OF A MISPAIRED RNA DOUBLE HELIX AT 1.6 ANGSTROMS RESOLUTION AND IMPLICATIONS FOR THE PREDICTION OF RNA SECONDARY STRUCTURE | W.CRUSE,P.SALUDJIAN,E.BIALA,P.STRAZEWSKI,T.PRANGE,O.KENNARD | |
3L25 | FR3D | CF | 16 | 8 | 2.0 | 1-26-10 | synthetic | CRYSTAL STRUCTURE OF ZAIRE EBOLA VP35 INTERFERON INHIBITORY DOMAIN BOUND TO 8 BP DSRNA | D.W.LEUNG,K.C.PRINS,D.M.BOREK,M.FARAHBAKHSH,J.M.TUFARIELLO, P.RAMANAN,J.C.NIX,L.A.HELGESON,Z.OTWINOWSKI,R.B.HONZATKO, C.F.BASLER,G.K.AMARASINGHE | |
435D | FR3D | AB | 28 | 14 | 1.4 | 6-14-99 | synthetic,synthetic | '-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' | U.MUELLER,H.SCHUEBEL,M.SPRINZL,U.HEINEMANN | |
1FL8 | FR3D | A | 280 | 82 | SOLUTION NMR | 10-16-00 | synthetic | HYPERMODIFIED NUCLEOSIDES IN THE ANTICODON OF TRNALYS STABILIZE A CANONICAL U-TURN STRUCTURE | M.SUNDARAM,P.C.DURANT,D.R.DAVIS | |
2VAL | FR3D | AC | 28 | 14 | 2.0 | 10-16-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX AT 2.0 ANGSTROM RESOLUTION | C.FORSTER,A.B.E.BRAUER,M.PERBANDT,D.LEHMANN,J.P.FURSTE, C.BETZEL,V.A.ERDMANN | |
2V6W | FR3D | AB | 14 | 7 | 1.8 | 11-06-07 | ESCHERICHIA COLI,ESCHERICHIA COLI | TRNASER ACCEPTOR STEM: CONFORMATION AND HYDRATION OF A MICROHELIX IN A CRYSTAL STRUCTURE AT 1.8 ANGSTROM RESOLUTION | C.FOERSTER,A.B.E.BRAUER,S.BRODE,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN | |
409D | FR3D | AB | 42 | 18 | 2.5 | 1-13-99 | synthetic | CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES | B.PAN,S.N.MITRA,L.SUN,D.HART,M.SUNDARALINGAM | |
3KMS | FR3D | BC | 12 | 5 | 2.2 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA TRIGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | 3KLV 3KNA Compare |
1SAQ | FR3D | AB | 14 | 6 | 2.7 | 5-18-04 | synthetic | CRYSTAL STRUCTURE OF THE RNA OCTAMER GIC(GA)GCC | S.B.JANG,K.BAEYENS,M.S.JEONG,J.SANTALUCIA JR,D.TURNER, S.R.HOLBROOK | |
2K65 | FR3D | AB | 280 | 140 | SOLUTION NMR | 7-14-09 | synthetic,synthetic | NMR SOLUTION STRUCTURE OF THE EXON/INTRON BINDING SITE 1 (EBS1/IBS1) OF THE GROUP II INTRON SC.AI5(GAMMA) | D.KRUSCHEL,R.K.O.SIGEL | |
3GVN | FR3D | AB | 14 | 7 | 1.2 | 7-28-09 | synthetic,synthetic | THE 1.2 ANGSTROEM CRYSTAL STRUCTURE OF AN E.COLI TRNASER ACCEPTOR STEM MICROHELIX REVEALS TWO MAGNESIUM BINDING SITES | A.EICHERT,J.P.FURSTE,A.SCHREIBER,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FORSTER | |
2ERR | FR3D | B | 210 | 28 | SOLUTION NMR | 1-10-06 | HOMO SAPIENS | NMR STRUCTURE OF THE RNA BINDING DOMAIN OF HUMAN FOX-1 IN COMPLEX WITH UGCAUGU | F.H.ALLAIN,S.D.AUWETER | |
466D | FR3D | AB | 28 | 14 | 1.2 | 8-16-99 | synthetic,synthetic | DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX | U.MUELLER,Y.A.MULLER,R.HERBST-IRMER,M.SPRINZL,U.HEINEMANN | 464D 434D Compare |
2V7R | FR3D | AB | 14 | 7 | 1.2 | 3-18-08 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION | C.FOERSTER,M.MANKOWSKA,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN | |
2VUQ | FR3D | AB | 14 | 7 | 1.2 | 3-10-09 | HOMO SAPIENS,HOMO SAPIENS | CRYSTAL STRUCTURE OF A HUMAN TRNAGLY ACCEPTOR STEM MICROHELIX (DERIVED FROM THE GENE SEQUENCE DG9990) AT 1.18 ANGSTROEM RESOLUTION | A.EICHERT,M.PERBANDT,A.SCHREIBER,J.P.FUERSTE,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2A0P | FR3D | AB | 14 | 6 | 1.9 | 8-16-05 | synthetic | CRYSTAL STRUCTURE OF RNA OLIGOMER CONTAINING 4'-THIORIBOSE | P.HAEBERLI,I.BERGER,P.S.PALLAN,M.EGLI | |
2W89 | FR3D | AB | 28 | 14 | 2.0 | 11-17-09 | ESCHERICHIA COLI,ESCHERICHIA COLI | CRYSTAL STRUCTURE OF THE E.COLI TRNAARG AMINOACYL STEM ISSOACCEPTOR RR-1660 AT 2.0 ANGSTROEM RESOLUTION | A.EICHERT,A.SCHREIBER,J.P.FUERSTE,M.PERBANDT,C.BETZEL, V.A.ERDMANN,C.FOERSTER | |
2JRG | FR3D | A | 165 | 58 | SOLUTION NMR | 7-24-07 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF E. COLI TRNA- VAL3 WITH 2 MODIFICATIONS (CMO5U34 M6A37) | F.A.VENDEIX,A.DZIERGOWSKA,E.M.GUSTILO,W.D.GRAHAM,B.SPROAT, A.MALKIEWICZ,P.F.AGRIS | |
2ADC | FR3D | B | 240 | 1 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD34 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
1RAU | FR3D | ABCD | 24 | 16 | SOLUTION NMR | 1-31-94 | synthetic | SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA TETRAPLEX CONTAINING G-AND U-QUARTET STRUCTURES | C.CHEONG,P.B.MOORE | |
2AD9 | FR3D | B | 120 | 17 | SOLUTION NMR | 10-04-05 | HOMO SAPIENS | SOLUTION STRUCTURE OF POLYPYRIMIDINE TRACT BINDING PROTEIN RBD1 COMPLEXED WITH CUCUCU RNA | F.C.OBERSTRASS,S.D.AUWETER,M.ERAT,Y.HARGOUS,A.HENNING, P.WENTER,L.REYMOND,S.PITSCH,D.L.BLACK,F.H.T.ALLAIN | |
1OSU | FR3D | A | 18 | 6 | 1.4 | 4-04-96 | synthetic | STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU- OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS | M.C.WAHL,S.T.RAO,M.SUNDARALINGAM | |
1PBM | FR3D | AB | 12 | 6 | SOLUTION NMR | 7-07-97 | synthetic | STRUCTURE OF RIBONUCLEIC ACID, NMR, 1 STRUCTURE | M.POPENDA,E.BIALA,J.MILECKI,R.W.ADAMIAK | |
2GXB | FR3D | EF | 12 | 6 | 2.2 | 5-01-07 | synthetic | CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA | A.ATHANASIADIS,D.PLACIDO,A.RICH | 1T4X Compare |
1J8G | FR3D | A | 24 | 20 | 0.6 | 11-23-01 | synthetic | X-RAY ANALYSIS OF A RNA TETRAPLEX R(UGGGGU)4 AT ULTRA-HIGH RESOLUTION | J.DENG,Y.XIONG,M.SUNDARALINGAM | |
3MDI | FR3D | C | 6 | 1 | 2.1 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UGUAAA | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3G9Y | FR3D | C | 6 | 1 | 1.4 | 3-03-09 | synthetic | CRYSTAL STRUCTURE OF THE SECOND ZINC FINGER FROM ZRANB2/ZNF265 BOUND TO 6 NT SSRNA SEQUENCE AGGUAA | F.E.LOUGHLIN,A.P.MCGRATH,M.LEE,J.M.GUSS,J.P.MACKAY | |
1I9K | FR3D | BD | 24 | 3 | SOLUTION NMR | 5-30-01 | synthetic | THE RNA I-MOTIF | K.SNOUSSI,S.NONIN-LECOMTE,J.L.LEROU | |
3MDG | FR3D | C | 6 | 1 | 2.2 | 6-02-10 | synthetic | CRYSTAL STRUCTURE OF THE 25KDA SUBUNIT OF HUMAN CLEAVAGE FACTOR IM IN COMPLEX WITH RNA UUGUAU | Q.YANG,G.M.GILMARTIN,S.DOUBLIE | |
3KMQ | FR3D | BC | 10 | 5 | 2.1 | 7-07-10 | synthetic,synthetic | G62S MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA, TETRAGONAL STRUCTURE | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
1N38 | FR3D | BC | 7 | 2 | 2.8 | 12-25-02 | synthetic,synthetic | REOVIRUS POLYMERASE LAMBDA3 ELONGATION COMPLEX WITH ONE PHOSPHODIESTER BOND FORMED | Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON | |
1WTT | FR3D | A | 121 | 55 | SOLUTION NMR | 1-27-99 | synthetic | HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, 11 STRUCTURES | J.P.RIFE,P.B.MOORE | |
3JXR | FR3D | AB | 10 | 4 | 1.2 | 2-09-10 | synthetic | X-RAY STRUCTURE OF R[CGCG(5-FLUORO)CG]2 | D.A.ADAMIAK,J.MILECKI,R.W.ADAMIAK,W.RYPNIEWSKI | 3JXQ Compare |
1LUU | FR3D | A | 143 | 44 | SOLUTION NMR | 9-09-03 | synthetic | NMR SOLUTION STRUCTURE OF THE ANTICODON OF YEAST TRNA-PHE WITH 4 MODIFICATIONS (OMC32 OMG34 1MG37 5MC40) | J.W.STUART,K.M.KOSHLAP,R.H.GUENTHER,P.F.AGRIS | 1LUX Compare |
1J6S | FR3D | A | 20 | 12 | 1.4 | 8-05-03 | synthetic | CRYSTAL STRUCTURE OF AN RNA TETRAPLEX (UGAGGU)4 WITH A- TETRADS, G-TETRADS, U-TETRADS AND G-U OCTADS | B.PAN,Y.XIONG,K.SHI,J.DENG,M.SUNDARALINGAM | |
2O32 | FR3D | A | 280 | 50 | SOLUTION NMR | 2-06-07 | synthetic | SOLUTION STRUCTURE OF U2 SNRNA STEM I FROM HUMAN, CONTAINING MODIFIED NUCLEOTIDES | D.G.SASHITAL,V.VENDITTI,C.G.ANGERS,G.CORNILESCU,S.E.BUTCHER | |
377D | FR3D | AB | 20 | 8 | 1.8 | 8-10-98 | synthetic | '-R(*CP*GP*UP*AP*CP*DG)-3' | R.BISWAS,S.N.MITRA,M.SUNDARALINGAM | |
1KOS | FR3D | A | 120 | 40 | SOLUTION NMR | 10-22-99 | synthetic | SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION | K.M.KOSHLAP,R.GUENTHER,E.SOCHACKA,A.MALKIEWICZ,P.F.AGRIS | |
3KOA | FR3D | BC | 9 | 3 | 2.4 | 7-07-10 | synthetic,synthetic | M296I MUTANT OF FOOT-AND-MOUTH DISEASE VIRUS RNA-POLYMERASE IN COMPLEX WITH A TEMPLATE- PRIMER RNA AND GTP | C.FERRER-ORTA,N.VERDAGUER,R.PEREZ-LUQUE | |
1P79 | FR3D | A | 20 | 8 | 1.1 | 11-04-03 | synthetic | CRYSTAL STRUCTURE OF A BULGED RNA TETRAPLEX: IMPLICATIONS FOR A NOVEL BINDING SITE IN RNA TETRAPLEX | B.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
2KYE | FR3D | A | 220 | 60 | SOLUTION NMR | 6-30-10 | synthetic | SOLUTION STRUCTURE OF THE PSEUDOURIDINE MODIFIED P6.1 HAIRPIN OF HUMAN TELOMERASE RNA | N.-K.KIM,C.A.THEIMER,J.R.MITCHELL,K.COLLINS,J.FEIGON | |
1YTU | FR3D | CD | 9 | 4 | 2.5 | 4-05-05 | synthetic,synthetic | STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN | J.B.MA,Y.R.YUAN,G.MEISTER,Y.PEI,T.TUSCHL,D.J.PATEL | |
2L5D | FR3D | B | 100 | 1 | SOLUTION NMR | 4-20-11 | HOMO SAPIENS | SOLUTION STRUCTURES OF HUMAN PIWI-LIKE 1 PAZ DOMAIN WITH SSRNA (5'- PUGACA) | L.ZENG,Q.ZHANG,K.YAN,M.ZHOU | |
2AWE | FR3D | ABCD | 39 | 24 | 2.1 | 2-07-06 | engineered | BASE-TETRAD SWAPPING RESULTS IN DIMERIZATION OF RNA QUADRUPLEXES: IMPLICATIONS FOR FORMATION OF I-MOTIF RNA OCTAPLEX | B.PAN,K.SHI,M.SUNDARALINGAM | |
2GRB | FR3D | EFGH | 32 | 31 | 1.4 | 11-21-06 | synthetic | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | B.PAN,K.SHI,M.SUNDARALINGAM | |
1D0T | FR3D | A | 160 | 60 | SOLUTION NMR | 5-24-00 | synthetic | SOLUTION STRUCTURE OF A PHOSPHOROTHIOATE MODIFIED RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN | J.S.SMITH,E.P.NIKONOWICZ | |
1ME1 | FR3D | A | 80 | 40 | SOLUTION NMR | 8-19-03 | synthetic | CHIMERIC HAIRPIN WITH 2',5'-LINKED RNA LOOP AND RNA STEM | A.Y.DENISOV,R.N.HANNOUSH,K.GEHRING,M.J.DAMHA | |
1MDG | FR3D | A | 20 | 16 | 1.5 | 8-12-03 | synthetic | AN ALTERNATING ANTIPARALLEL OCTAPLEX IN AN RNA CRYSTAL STRUCTURE | B.C.PAN,Y.XIONG,K.SHI,M.SUNDARALINGAM | |
1G3A | FR3D | AB | 8 | 2 | SOLUTION NMR | 8-01-01 | synthetic | STRUCTURE OF RNA DUPLEXES (CIGCGICG)2 | X.CHEN,R.KIERZEK,D.H.TURNER | |
2O83 | FR3D | AB | 252 | 108 | SOLUTION NMR | 7-10-07 | synthetic | THE STRUCTURE OF TANDEM GA RNA PAIRS WHEN FLANKING PAIRS ARE ISOG-ISOC PAIRS | S.D.KENNEDY,D.H.TURNER | |
2O81 | FR3D | AB | 252 | 82 | SOLUTION NMR | 7-10-07 | synthetic | THE STRUCTURE OF TANDEM GA RNA PAIRS WHEN FLANKING PAIRS ARE ISOG-ISOC PAIRS | G.CHEN,D.H.TURNER | |