Description:
LSU Helix 12 (H12) Hairpin Loop. GNRA-like with altered stacking
Basepair signature:
cWW-R-R
Free text annotation:
No annotation provided yet.
Intraclusteral linkage
Min 0.00 | Avg 0.00 | Max 0.00
Help
#D - ordering by discrepancy relative to the exemplar, #S - ordering by similarity (same as in the heat map). More
#D#SLoop idPDBBulges 1 2 3 4 51-52-4
114IOA1U622G623A624A626A627cWWntSS

3D structures

Complete motif including flanking bases
SequenceCounts
UGAAAA1
Non-Watson-Crick part of the motif
SequenceCounts
GAAA1

Release history

Release1.91.101.111.121.131.141.151.161.171.182.03.03.1
Date2013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-152014-07-262014-09-062014-10-092017-04-242018-06-122018-06-20
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in HL_79038.1Only in the parent motif
HL_23971.1
Compare
HL_4IOA_018HL_3U5H_076, HL_4A1C_003, HL_4FY3_011

Children motifs

This motif has no children motifs.

Coloring options: