Description:
No description added yet.
Basepair signature:
cWW-cWW
Free text annotation:
No annotation provided yet.
Intraclusteral linkage
Min 0.03 | Avg 0.39 | Max 0.99
Help
#D - ordering by discrepancy relative to the exemplar, #S - ordering by similarity (same as in the heat map). More
#D#SLoop idPDBDiscBulges 1 2break 3 41-31-42-32-43-4
1811DQH0.00001C3A4*U15G17cWWcWW
2824V4Q0.07941U552A553*U30A32cWWcWW
3874BTS0.09771C192C193*G181G183cWWcWW
4791S030.09791C39C40*G9G11cWWcWW
5803JAM0.09841U462A463*U438A440cWWcWW
6884V880.10031U463A464*U439A441cWWcWW
7833J9M0.10901A1338G1339*C1253U1255cWWcWW
8764P3U0.10911C30U31*A17G19cWWcWW
92311I9X0.11821U9A10*U4A6cWWcWW
102353J7P0.12071U511A512*U487A489cWWcWW
11774BTS0.12201C1374C1375*G1364G1366cWWcWW
12781S720.12221C95C96*G86G88cWWcWW
132373J790.12251C1014A1016*U947G948cWWcWW
14894BTS0.12911C455A456*U431G433cWWcWW
151314X4O0.12933C3C4*G28G32cWWcWW
162381FJG0.13341U552A553*U30A32cWWcWW
172363J7A0.13761U469A470*U445A447cWWcWW
181001DQF0.14041C3A4*U15G17cWWcWW
191113J7Y0.14181C3078G3079*C3088G3090cWWcWW
201023J7Y0.14531C2254C2255*G2145G2147cWWcWW
212305AJ00.14551C3603C3604*G3798G3800cWWcWW
22735AOX0.14651C108C109*G56G58cWWcWW
231204P3U0.14881A40G42*C7U8cWWcWW
24853GX50.14951C40C41*G13G15cWWcWW
25954V8P0.15011G804G806*C776C777cWWcWW
26981I9X0.15071U9A10*U4A6cWWcWW
27861FJG0.15291C1208C1209*G1048G1050cWWcWW
28923JAM0.15301U599A600*U24A26cWWcWW
29354V4Q0.15481C1208C1209*G1048G1050cWWcWW
30964V190.15541C12U13*A103G105cWWcWW
313323J7A0.15571C1686C1687*G1369G1371cWWcWW
322345A2Q0.15651U511A512*U487A489cWWcWW
332733J920.15721C15A16*U62G64cWWcWW
341303J790.15841C3716A3717*U3773G3775cWWcWW
35844V9F0.15941G2279A2280*U2290C2292cWWcWW
361034V910.15941U3363C3364*G3340A3342cWWcWW
37344RZD0.15961C56C57*G78G80cWWcWW
38974V880.16101U3363C3364*G3340A3342cWWcWW
391334V9F0.16121C2626G2627*C2636G2638cWWcWW
402834U4U0.16241A63G65*C15U16cWWcWW
412323J7Q0.16321C15A16*U62G64cWWcWW
42334BTS0.16401U1100C1101*G1091A1093cWWcWW
433374P3U0.16411A17G19*C30U31cWWcWW
44373JAM0.16501C1438C1439*G1267G1269cWWcWW
45444V8P0.16641C3320U3321*A3297G3299cWWcWW
461324V8P0.16881C2948G2949*C2958G2960cWWcWW
472513J7Y0.17001A2730G2732*C2929U2930cWWcWW
482843J790.17031A3731G3733*C3756U3757cWWcWW
493351R3E0.17063C415C416*G408G412cWWcWW
501193NDB0.17221G137G138*C239C241cWWcWW
51724BTS0.17291C1411C1412*G1240G1242cWWcWW
52913J7A0.17551U607A608*U24A26cWWcWW
531143MEI0.17841C7G8*C15G17cWWcWW
54744V880.17851C1440C1441*G1268G1270cWWcWW
55755A2Q0.17881C1750C1751*G1782G1784cWWcWW
561394V910.18011C2960G2961*C2970G2972cWWcWW
572851R3E0.18103G408G412*C415C416cWWcWW
581014V4Q0.18131C392A393*U367G369cWWcWW
59282A640.18141C77C78*G66G68cWWcWW
601293J9M0.18321U838A839*U850A852cWWcWW
611214ANG0.18491A5^G7^*C15^U16^cWWcWW
621224ANG0.18491A5^G7^*C15^U16^cWWcWW
632721S030.18531G9G11*C39C40cWWcWW
641344V880.18581C2960G2961*C2970G2972cWWcWW
651385J7L0.18611C2591G2592*C2601G2603cWWcWW
66712ZY60.18731C24C25*G10G12cWWcWW
67464V880.18831G2614G2615*C2625C2627cWWcWW
681355AJ00.18841C4499G4500*C4509G4511cWWcWW
691103J7P0.18901C1086A1087*U1209G1211cWWcWW
70315GAP0.18951U48U49*A24A26cWWcWW
71943J7A0.19011C1381G1382*C1672G1674cWWcWW
72933J790.19091G898G900*C875C876cWWcWW
731043J7P0.19161G497G499*C655C656cWWcWW
74453J9W0.19171G2249G2250*C2231C2233cWWcWW
753333WBM0.19551U23C24*G2A4cWWcWW
76233J790.19561C1424C1425*G1335G1337cWWcWW
77384V8P0.19601C6C7*G147G149cWWcWWcWW
782593J790.19761C992G994*C1005G1006cWWcWW
792333J7P0.19901U5035C5036*G5012A5014cWWcWW
80364V910.19911C1669C1670*G1778G1780cWWcWW
812534FRG0.19931G23G25*C39C40cWWcWW
821373J9W0.20001C2620G2621*C2630G2632cWWcWW
83901U630.20241U16C17*G28A30cWWcWW
841683J7A0.20311A936G937*C1027U1029cWWcWW
852143J7P0.20351C1590G1592*C1603G1604cWWcWW
86413J7P0.20401C3632C3633*G3827G3829cWWcWW
871153J790.20411C3319G3320*C3329G3331cWWcWW
881365AN90.20441C3293G3294*C3303G3305cWWcWW
89225AN90.20541C1531C1532*G1442G1444cWWcWW
90204V8P0.20541C1323C1324*G1234G1236cWWcWW
91995AJ00.20561U4993C4994*G4970A4972cWWcWW
923364BTS0.20571A579G580*C552U554cWWcWW
931133JAM0.20591C1279G1280*C1424G1426cWWcWW
94694AOB0.20621C40^C41^*G13^G15^cWWcWW
95704AOB0.20621C40C41*G13G15cWWcWW
962425FDU0.20651G2089G2091*C2454C2455cWWcWW
97305GAN0.20701U48U49*A24A26cWWcWW
982293J7P0.20761G1496G1498*C1467C1468cWWcWW
99214V880.20801C1296C1297*G1207G1209cWWcWW
1001274P430.20931C7U8*A40G42cWWcWW
1012552IZN0.20951G14^G15^*C5^C7^cWWcWW
1022542IZN0.20951G14^G15^*C5^C7^cWWcWW
103475AN90.20971G2947G2948*C2958C2960cWWcWW
1042743J9W0.21021C32A34*U561G562cWWcWW
105323J9W0.21061C152C153*G175G177cWWcWW
1062713SN20.21061U7G9*C24A25cWWcWW
1073312VPL0.21061U16C17*G28A30cWWcWW
1082394V8P0.21072A240G243*C177U178cWWcWW
1091714V9F0.21101C1826G1827*C2021G2023cWWcWW
110623J790.21151C2421C2422*G2616G2618cWWcWW
111174C7O0.21211A15A16*U27U29cWWcWW
1121675LJ30.21221G81A82*U65C67cWWcWW
1133151FJG0.21411G392A393*U367C369cWWcWW
1142953TZR0.21411G105G107*U61C62cWWcWW
115155AJ30.21451A693G694*C608U610cWWcWW
1162161JZV0.21491G24A25*U32C34cWWcWW
1171285AJ00.21581C6C7*G149G151cWWcWWcWW
118394V880.21601C7C8*G150G152cWWcWW
1191885DEA0.21671C30G31*C5G7cWWcWW
1202503J7P0.21691G508U510*A649C650cWWcWW
121164V4Q0.21771A44G45*C396U398cWWcWW
1222584V910.21781C873G875*C886G887cWWcWW
1231705FDU0.21791U1205G1206*C1040A1042cWWcWW
1242524V190.21851A1060G1062*C1263U1264cWWcWW
1252431S030.21921A6G8*C41U42cWWcWW
1261264P430.21971C30U31*A17G19cWWcWW
127433J790.22061A605A606*U584U586cWWcWW
128293DHS0.22251C77C78*G66G68cWWcWW
1291124V190.22281C1412G1413*C1422G1424cWWcWW
130643J790.22311U1557U1558*A1548A1550cWWcWW
1313184V880.22511G2409U2411*A2811C2812cWWcWW
1322752UWM0.22821C21G22*C25G27cWWcWW
1331914V880.22891C873G875*C886G887cWWcWW
1342115AJ00.23101C1572G1574*C1585G1586cWWcWW
135514V880.23121A755U756*A775U777cWWcWW
1362453D0U0.23191G9G11*C75C76cWWcWW
1373164V9F0.23281G834G836*C847C848cWWcWW
1382604V8P0.23311U62A64*U15A16cWWcWW
1391694IOA0.23331U1170A1171*U1005A1007cWWcWW
1402684V880.23371G779G781*C752C753cWWcWW
1412804V8P0.23431A1207G1209*U1351U1352cWWcWW
1421723B310.23461C6194G6195*C6181G6183cWWcWW
1431875DEA0.23511C30G31*C5G7cWWcWW
1441764KZD0.23691C10G11*C74G76cWWcWW
145403J7P0.23691C6C7*G149G151cWWcWWcWW
1461093J7P0.23721C1337G1338*C1488G1490cWWcWW
1472404IOA0.23731G2050G2052*C2421C2422cWWcWW
1483344V880.23741A13C15*G144U145cWWcWW
1492823D2V0.23831G73G75*C5C6cWWcWW
1501183J7P0.23851G2681G2682*C2651C2653cWWcWW
1513174V8P0.23871G2404U2406*A2799C2800cWWcWW
152244V910.23901C1296C1297*G1207G1209cWWcWW
1532614V9F0.24031A2108G2110*C2477U2478cWWcWW
1542475AJ00.24111G143U144*A12C14ncWWcWWcWW
155195FJC0.24171C40C41*G13G15cWWcWW
1562574V8P0.24211U1758G1760*C1733A1734cWWcWW
1571053J7P0.24311C2613C2614*G2724G2726cWWcWW
158144V4Q0.24451C470U471*A460G462cWWcWW
1592283J7P0.24511G708C709*G1287C1289cWW
1602124V4Q0.24721C1195A1197*U1060G1061cWWcWW
1612413J9W0.24791G2096G2098*C2471C2472cWWcWW
1621415J7L0.24791G880G881*U895C897cWWcWW
1632623NDB0.24961G237G238*C139C141cWWcWW
164523J9M0.25091G822A823*U690C692cWWcWW
1652813J9W0.25111G1058G1060*C1217C1218cWWcWW
1662463DIR0.25201G12G14*C78C79cWWcWW
1672444V9F0.25241G1108G1110*C1253C1254cWWcWW
168264V910.25301C7C8*G150G152cWWcWW
1691404R0D0.25341G148G149*U121C123ncWWcWW
170503DHS0.25371G395C396*G51C53cWWcWW
1711163JCS0.25411C1399G1400*C1409G1411cWWcWW
172274IOA0.25491A1534C1535*G1488U1490cWWcWW
1732654V880.25531U24A26*U600A601cWWcWW
174604V190.25581C820C821*G973G975cWWcWW
1751924V8P0.25611C898G900*C911G912cWWcWW
1763235J7L0.25631G36C37*G442C444cWWcWW
177423J7P0.25901G2063G2064*U1918C1920cWWcWW
178635A2Q0.25991C1502C1503*G1325G1327cWWcWW
1792703J7Y0.26031G1768G1770*C1682C1683cWWcWW
180613J7Y0.26071C2490C2491*G2643G2645cWWcWW
181654V910.26321A13C15*G144U145cWWcWW
1822153J9M0.26361A855A856*U830U832cWWcWW
1832491ZDK0.26471G7^G9^*C16^C17^cWWcWW
1842481ZDK0.26471G7^G9^*C16^C17^cWWcWW
1852564V910.26581G779G781*C752C753cWWcWW
1863195AJ00.26631G3884U3886*A4350C4351cWWcWW
1872863J7P0.26651G1325G1327*C1502C1503cWWcWW
1882784V880.27051G1778G1780*C1669C1670cWWcWW
189185AJ00.27121C2016C2017*G1927G1929cWWcWW
1901895A2Q0.27241C1412G1413*C1427G1429cWWcWW
1912134LGT0.27251C2601G2603*C2591G2592cWWcWW
192493J790.27301U2738U2739*A2809A2811cWWcWW
1932763W3S0.27331G43^G44^*C26^C27^cWWcWW
1942773W3S0.27331G43G44*C26C27cWWcWW
1952903JAM0.27341G1050G1052*C1065C1066cWWcWW
1962636MSF0.27411G12^G13^*C2^C4^cWWcWW
1972646MSF0.27411G12^G13^*C2^C4^cWWcWW
1981541FJG0.27491U375G376*U387A389cWWcWW
1992675AJ00.27731G1478G1480*C1449C1450cWWcWW
2001774R4V0.27751C660A661*U712G714cWWcWW
2011784R4V0.27751C660^A661^*U712^G714^cWWcWW
2021745J7L0.27991U1159G1160*C994A996cWWcWW
2031734V8P0.28131C2232G2233*C2199G2201cWWcWW
2043144V880.28201C3193C3194*G3197G3199cWWcWW
2052893J790.28221G3580G3582*C3620C3621cWWcWW
206545AJ30.28301G178A179*U44C46cWWcWW
2073204V910.28431A2811C2812*G2409U2411cWWcWW
2081172QUX0.28511C20G21*C5G7cWWcWW
2092174FRN0.28651C39C40*G23G25cWWcWW
2101751U9S0.28982U116G117*C224A227cWWcWW
2113384P3U0.29031A40G42*C7U8cWWcWW
2123434IOA0.29341A1022G1024*C1160U1161cWWcWW
2132985A2Q0.29471G105G107*U61C62cWWcWW
2143111NBS0.29491G113C114*G129C131cWWcWW
2152883J7P0.29511G695G697*C459C460cWWcWW
2162694V880.29621G1051G1053*C1066C1067cWWcWW
2171864BTS0.29641C1397G1399*C1252G1253cWWcWW
2183294V8P0.29651G3158A3160*U3179C3180cWWcWW
21993J790.29661A880A881*U892U894cWWcWW
2202794V8P0.29761G2318G2320*C2124C2125cWWcWW
2213213J7P0.29801G3913U3915*A4388C4389cWWcWW
2221511FJG0.29852G231G232*U129C131cWWcWW
2233284R0D0.29901G312A314*U161C162cWWcWW
2241074V880.29951C1426G1428*C1280G1281cWWcWW
2253095AJ00.30201G699C700*G1270C1272cWWcWW
226104V4Q0.30231G75G76*U93C95cWWcWW
2273103J790.30331A3170C3171*G2702U2704cWWcWW
228595AN90.30411C2395C2396*G2589G2591cWWcWW
2293125AJ30.30411U21U22*A3A5cWWcWW
2301944R4V0.30501C766G767*C651G653cWWcWW
2311954R4V0.30501C766^G767^*C651^G653^cWWcWW
2321931FJG0.30511C1195G1197*C1060G1061cWWcWW
2333255AN90.30511G2675U2677*A3144C3145cWWcWW
234564V910.30561A3210C3211*G3177U3179cWWcWW
235113Q1Q0.30602G108G109*C205C208cWWcWW
236534V880.30881A3210C3211*G3177U3179cWWcWW
2373973J9W0.31081G46U47*A404C406cWWcWW
2383245FDU0.31321G36C37*G468C470cWWcWW
2392103J9W0.31381C1204A1206*U1070G1071cWWcWW
24053J9M0.31431A685A686*U859U861cWWcWW
2413224IOA0.31471G36C37*G454C456cWWcWW
2423425FDU0.31471G810G812*C744C745cWWcWW
2433391SI30.31630C401G402*C406^U407^cWWcWW
2441854V910.31641C577G579*U512G513cWWcWW
2452273J7P0.31701G2299G2301*C2334C2335cWWcWW
2463414IOA0.31741G776G778*C710C711cWWcWW
2471534V4Q0.31751U375G376*U387A389cWWcWW
2481085A2Q0.31901C1488G1490*C1337G1338cWWcWW
2492913JAN0.31921G175G177*C220C221cWWcWW
2501254PHY0.31921C12C13*G38G40cWWcWW
251483J7P0.32121G4191A4192*U4202C4204cWWcWW
2522972PN40.32141G105G107*U61C62cWWcWW
2531463J9W0.32161U383G384*U395A397cWWcWW
2542663J9W0.32291G344G346*C359C360cWWcWW
2551424V8P0.32301G158G159*U260C262cWWcWW
2561434BTS0.32422A291G292*U109U112cWWcWW
2573823J790.32431A151C152*G13U15cWWcWW
2581483J9W0.32441G2443G2444*U2430C2432cWWcWW
2593303V7E0.32631G13G15*C40C41cWWcWW
2603484V880.32672G3353G3356*C3349C3350cWWcWW
2613133J790.32671A1308A1310*U1452U1453cWWcWW
2621903J9M0.32681U1325G1327*C1265A1266cWWcWW
2633721DUQ0.32821G408C409*G420C422cWWcWW
2641244V910.32861C2237G2238*C2204G2206cWWcWW
2652224V910.32982A3077G3080*C3063U3064cWWcWW
2661583UCZ0.32992G56G57*U81C84cWWcWW
2672874V190.33111G477G479*C586C587cWWcWW
2683263JCS0.33191A74A76*U589U590cWWcWW
2692963J790.33231G197G199*U212C213cWWcWW
2703654V9F0.33371G322C323*G307C309cWWcWW
271553J7P0.33421G143U144*A12C14ncWWcWWcWW
2722944V4Q0.33501G925G927*U1390U1391cWWcWW
2732923J9W0.33651G935G937*U1399U1400cWWcWW
274574V8P0.33651A204C205*G189U191cWWcWW
2751234PHY0.33731C20C22*G30G31cWWcWW
27674V880.33942A300A301*U113U116cWWcWW
277254BTS0.33951A473G474*C498U500cWWcWW
27884V4Q0.34021G922A923*U1393C1395cWWcWW
2793495AN90.34061G3104G3106*C3120C3121cWWcWW
2802214V880.34192A3077G3080*C3063U3064cWWcWW
2813405FDU0.34271G1506G1508*C1498C1499cWWcWW
2823274V8C0.34291G118A119*U1C2cWWcWW
2832023J790.34342A3462G3465*U3448U3449cWWcWW
284664V880.34501C2128U2129*G2323G2325cWWcWW
2851575J7L0.34511G2414G2415*U2401C2403cWWcWW
2863903JAM0.34761A287U288*A264U266cWWcWW
28745AJ30.34801A39A40*U215U217cWWcWW
2883083J9M0.34911A649A651*U667U668cWWcWW
2891595AN90.35032U2466G2467*U2507A2510cWWcWW
290674BTS0.35041U1599U1600*G1122A1124cWWcWW
291135J7L0.35141G862A863*U913C915cWWcWW
2921825AN90.35141C2503G2504*C2470G2472cWWcWW
2931494V9F0.35171G274G275*U374C376cWWcWW
2943672OIU0.35321A41C42*G18U20cWWcWW
2951613J790.35352U2493G2494*U2534A2537cWWcWW
2961965AJ30.35471C620A621*U680G682cWWcWW
2972931FJG0.35711G925G927*U1390U1391cWWcWW
2981503IWN0.35872G46G47*U76C79cWWcWW
2993863HHN0.35931A112C113*G46U48cWWcWW
3001603J7Y0.36222U2552G2553*U2562A2565cWWcWW
3013715AJ00.36441G25C26*G342C344cWWcWW
3023443OX00.36491G12A14*U27C28cWWcWW
3033984BTS0.36561U439C440*G450A452cWWcWW
3043894V880.36581A288U289*A265U267cWWcWW
3051663J7P0.36712U3704G3705*U3745A3748cWWcWW
3062035J7L0.36812A2711G2714*U2695U2696cWWcWW
3071794V8P0.37001A2774G2775*C2760U2762cWWcWW
30865A2Q0.37052A348A349*U112U115cWWcWW
3093464V910.37061A1180A1182*U1324U1325cWWcWW
310585AJ30.37101A834C835*G529U531cWWcWW
3111551FUF0.37102G23G24*U5C8cWWcWW
3123874V880.37171A204C205*G189U191cWWcWW
313685A2Q0.37331U1691U1692*G1206A1208cWWcWW
3141801NBS0.37352U181G182*U228A231cWWcWW
3153023JAM0.37351G1148A1150*U1625U1626cWWcWW
3163732PJP0.37581A29C30*G16U18cWWcWW
3173834BTS0.37671U1322C1323*G1343A1345cWWcWW
3181633J9W0.37702U1870G1871*U1927A1930cWWcWW
3191561FUF0.37842G9G10*U19C22cWWcWW
3202185AJ00.37891G2278G2280*C2313C2314cWWcWW
3213762OIU0.38141A41C42*G18U20cWWcWW
3224005A2Q0.38161A336C337*G312U314cWWcWW
3231455AJ30.38201U194G195*U206A208cWWcWW
3241973J9W0.38301U1205G1206*C1040A1042cWWcWW
3253805F5H0.38301A4C5*G18U20cWWcWW
3263885AJ00.38371A1819U1820*A1705U1707cWWcWW
3271625J7L0.38522U1841G1842*U1898A1901cWWcWW
328124V9F0.38541G2860G2861*C2895C2897cWWcWW
3293454V880.38711A1180A1182*U1324U1325cWWcWW
3301525FDU0.38761G927G928*U941C943cWWcWW
3311814V880.38791C2237G2238*C2204G2206cWWcWW
3323075A2Q0.38831G606C608*G635C636cWWcWW
3333813JAM0.38891G585C586*G556C558cWWcWW
3343704V9F0.38981G33C34*G448C450cWWcWW
3353033J7A0.39001G1250A1252*U1924U1925cWWcWW
3361443J7A0.39022A306G307*U115U118ntHScWWcWW
3373473J790.39151G978A980*U952U953cWWcWW
3382995AJ00.39231G2703G2705*C2592C2593cWWcWW
3392045AN90.39292A3413G3416*U3399U3400cWWcWW
3403014JGN0.39490U503G504*C520^U521^cWWcWW
3413964V880.39651A481U482*A505U507cWWcWWncSW
3423774BTS0.39811G580C581*G550C552cWWcWW
3431644V190.40032U882G883*U892A895cWWcWW
3442015AJ00.40202A4617G4620*U4603U4604cWWcWW
3451654V880.40322U2200G2201*U2241A2244cWWcWW
3463795F5H0.40441A4C5*G18U20cWWcWW
3471473DIR0.40451G84G85*U109C111cWWcWW
3483781CSL0.40481G50C51*G67C69cWWcWW
3492083J7P0.40681C2083G2085*C2272G2273cWWcWW
3503741U9S0.40691G95C96*G107C109cWWcWW
3512054V8P0.40802A3066G3069*U3052U3053cWWcWW
3523664V880.40921G586C587*G557C559cWWcWW
3533643J7P0.41031U495C496*G506A508cWWcWW
3542233J7P0.41191G4899G4901*C4920C4921cWWcWW
3552094V910.41301C1385G1387*C1420G1421cWWcWW
3562004V8P0.41401G3144G3146*U3247C3248cWWcWW
3573992XXA0.41581G17C18*G82C84cWWcWW
3581843JAM0.41721U1654G1656*U1741A1742cWWcWW
3593684V910.41821A204C205*G189U191cWWcWW
3602203JCS0.42082A1379G1382*C1320U1321cWWcWW
3613854V8P0.42111A2557U2558*A2561U2563cWWcWW
3623922A640.42221G395C396*G51C53cWWcWW
3633695AJ00.42271A643C644*G502U504cWWcWW
3641984BTS0.42461U412G414*C402A403cWWcWW
3652191S030.42531A6G8*C41U42cWWcWW
3661833JB90.42641C7G8*C89G91cWWcWW
3671994R0D0.42852C572G575*U558G559cWWcWW
3683933J7A0.42951G294U295*A266C268cWWcWW
3693054V880.43241G1149A1151*U1627U1628cWWcWW
3703755A2Q0.43491A529U530*A554U556cWWcWW
3711064V8P0.43661G1094G1096*U1117C1118cWWcWW
3723843J7P0.43681G214C215*G199C201cWWcWW
3733584V8P0.44031G71C72*G90C92cWWcWW
3743943JAM0.44261U446C447*G457A459cWWcWW
3752245AN90.44442A3273G3276*C3214U3215cWWcWW
3763573J9M0.44981G1538A1540*U1510C1511cWWcWW
3773624V880.45571G25U26*G337C339cWWcWW
3782063J9W0.45672A2740G2743*U2724U2725cWWcWW
3793064V8P0.46231G336C338*G28U29cWWcWW
3803614V8P0.46271G2603U2604*A2614U2616cWWcWW
3813634V910.46361G25U26*G337C339cWWcWW
3823913J790.46381A1226U1227*A1105U1107cWWcWW
3833004V8P0.46621G1804G1806*U1693C1694cWWcWW
3842073J7P0.46642A4655G4658*U4641U4642cWWcWWncSH
3853044V910.46691G2323G2325*C2128U2129cWWcWW
3863604V880.47191G68U69*A89C91cWWcWW
3873594V910.47611G68U69*A89C91cWWcWW
3883534V910.47681G3318A3320*U3387C3388cWWcWW
3893554V880.47981G3318A3320*U3387C3388cWWcWW
3903524V9F0.48171A819U821*A793U794cWWcWW
3913954O260.48431G193C194*G181C183cWWcWW
3922253J790.48592A3299G3302*C3240U3241cWWcWW
3933564V910.49592G3353G3356*C3349C3350cWWcWW
3943544V880.49771G279G281*C275C276cWWcWW
3953504V910.49981G3197G3199*C3193C3194cWWcWW
39633UCZ0.50341G86G87*C52C54cWWcWW
3972263J7P0.54902A4517G4520*C4458U4459cWWcWW
39813IWN0.55331G81G82*C42C44cWWcWW
39921U9S0.56171G140G141*U158C160cWWcWW
4003514V190.59952G926C927*G957U960cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CC*GUG22
CG*CAG20
GAG*CC20
GUG*CC16
CC*GAG15
GC*GUC9
AC*GUU9
GC*GAC9
GCG*CC8
CC*GCG8
CG*CUG8
UG*UAAA7
AUG*CU7
CUG*CG7
GA*UAC7
AAG*CU6
GG*CAC5
UA*UUA5
CAG*CG5
GG*UGC5
CA*UCG5
GUU*AC5
GG*CGC5
GUG*UC5
UC*GUA5
AU*AAU5
UG*UGA4
AACG*CU4
AC*GAU4
AUA*UU4
GU*AUC4
AC*GCU4
CU*AAG4
CA*UAG4
GGA*UU4
CG*CGG3
GGG*UU3
UG*CCA3
GG*UAC3
GG*CUC3
CAA*UG3
GAA*UC3
GG*UUC3
AG*CAU3
AAUG*UU3
UA*UCA3
UCG*CA3
UA*UAA3
UC*GGA3
UU*AUA3
UU*GGA2
GG*UUUC2
GU*AAC2
UA*UGA2
GUUG*CC2
CA*UUG2
AA*UAU2
AA*UUU2
GG*UAGC2
GUA*UC2
AUUG*CU2
GU*GAC2
AGUG*UU2
UC*GAA2
AG*CUU2
GCG*UC2
AG*UAGU2
AUC*GU2
GC*GGC2
UG*UUAA2
AU*AUU2
AG*CCU2
UC*GCA2
AC*GGU1
AA*UGGU1
ACUG*UU1
GC*GCC1
GAC*GU1
AUCG*UU1
GU*AAU1
GAG*CU1
GC*GUAU1
AGU*AU1
GCA*UC1
CAAG*UG1
UG*CU1
GUC*GC1
CCG*CG1
GA*UGC1
UUG*UA1
AU*AGU1
UU*AAA1
GA*UCC1
AA*UGU1
GA*UUC1
GAU*AC1
AA*UCU1
AAGG*CU1
CGA*UG1
CU*ACG1
CC*GAUCG1
CU*AUG1
CC*GUUCG1
GUUCG*CC1
UAA*UA1
AUG*UU1
UAG*CA1
CAG*UG1
ACA*UU1
CAC*GG1
AA*UCGU1
CG*CU1
GG*CAAC1
UCA*UA1
UG*CAAA1
GG*UGAC1
UU*ACA1
CU*GAG1
Non-Watson-Crick part of the motif
SequenceCounts
*A93
*U81
U*51
A*44
*C32
*G30
C*17
G*9
*AA9
*AG4
UU*4
AC*4
AU*3
*UA3
*UU2
*2
GU*2
UC*1
*GG1
AA*1
*GA1
*UUC1
*AUC1
UUC*1
AG*1
*CG1
CU*1

Release history

Release2.0
Date2017-04-24
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Coloring options: