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{"num_instances":5,"num_nucleotides":6,"alignment":{"HL_3Q1Q_002":["3Q1Q|1|B|G|77","3Q1Q|1|B|U|78","3Q1Q|1|B|A|79","3Q1Q|1|B|A|80","3Q1Q|1|B|C|81","3Q1Q|1|B|C|83"],"HL_3P49_002":["3P49|1|A|G|41","3P49|1|A|U|42","3P49|1|A|A|43","3P49|1|A|A|44","3P49|1|A|A|45","3P49|1|A|C|47"],"HL_1U9S_001":["1U9S|1|A|G|84","1U9S|1|A|U|85","1U9S|1|A|A|86","1U9S|1|A|A|87","1U9S|1|A|C|88","1U9S|1|A|C|90"],"HL_1VWW_023":["1VWW|1|5|C|1763","1VWW|1|5|G|1764","1VWW|1|5|A|1765","1VWW|1|5|A|1766","1VWW|1|5|A|1767","1VWW|1|5|G|1769"],"HL_1VX2_003":["1VX2|1|2|G|156","1VX2|1|2|U|157","1VX2|1|2|A|158","1VX2|1|2|A|159","1VX2|1|2|U|160","1VX2|1|2|C|162"]},"motif_id":"HL_00415.1","chainbreak":-1,"common_name":"GNRA-like. Closed by tSH UC.","annotation":"","bp_signature":"cWW-R-R-R"},
{"num_instances":0,"num_nucleotides":0,"alignment":[],"motif_id":"HL_00721.1","chainbreak":-1,"common_name":"","annotation":"","bp_signature":"cWW"},
{"num_instances":2,"num_nucleotides":3,"alignment":{"HL_1VW3_024":["1VW3|1|A|U|1254","1VW3|1|A|U|1256","1VW3|1|A|A|1258"],"HL_4OOG_001":["4OOG|1|D|G|14","4OOG|1|D|U|17","4OOG|1|D|C|19"]},"motif_id":"HL_01389.1","chainbreak":-1,"common_name":"","annotation":"","bp_signature":"cWW"},
{"num_instances":2,"num_nucleotides":8,"alignment":{"HL_1VX6_021":["1VX6|1|A|A|995","1VX6|1|A|C|996","1VX6|1|A|G|997","1VX6|1|A|G|999","1VX6|1|A|C|1000","1VX6|1|A|A|1001","1VX6|1|A|A|1003","1VX6|1|A|U|1004"],"HL_3U5H_020":["3U5H|1|5|A|876","3U5H|1|5|C|877","3U5H|1|5|G|878","3U5H|1|5|G|880","3U5H|1|5|C|881","3U5H|1|5|A|882","3U5H|1|5|A|884","3U5H|1|5|U|885"]},"motif_id":"HL_01766.1","chainbreak":-1,"common_name":"LSU Helix 35 (H35) Hairpin Loop from Yeast","annotation":"Very similar to bacterial H35 HLs.","bp_signature":"cWW-R-tSW-cSS-R"},
{"num_instances":3,"num_nucleotides":8,"alignment":{"HL_4CUV_070":["4CUV|1|1|C|3240","4CUV|1|1|G|3241","4CUV|1|1|G|3242","4CUV|1|1|A|3243","4CUV|1|1|A|3244","4CUV|1|1|A|3245","4CUV|1|1|G|3246","4CUV|1|1|G|3247"],"HL_3U5H_070":["3U5H|1|5|C|3240","3U5H|1|5|G|3241","3U5H|1|5|G|3242","3U5H|1|5|A|3243","3U5H|1|5|A|3244","3U5H|1|5|A|3245","3U5H|1|5|G|3246","3U5H|1|5|G|3247"],"HL_1VWW_068":["1VWW|1|5|G|4907","1VWW|1|5|G|4908","1VWW|1|5|A|4909","1VWW|1|5|G|4910","1VWW|1|5|A|4911","1VWW|1|5|G|4912","1VWW|1|5|G|4913","1VWW|1|5|C|4914"]},"motif_id":"HL_01788.2","chainbreak":-1,"common_name":"LSU Yeast Hairpin Loop","annotation":"","bp_signature":"cWW-R-R-R-R-R"},
{"num_instances":9,"num_nucleotides":8,"alignment":{"HL_4NVV_047":["4NVV|1|A|G|1971","4NVV|1|A|G|1972","4NVV|1|A|U|1973","4NVV|1|A|A|1974","4NVV|1|A|A|1975","4NVV|1|A|G|1976","4NVV|1|A|U|1978","4NVV|1|A|C|1979"],"HL_4IOA_047":["4IOA|1|X|G|1932","4IOA|1|X|G|1933","4IOA|1|X|U|1934","4IOA|1|X|A|1935","4IOA|1|X|A|1936","4IOA|1|X|G|1937","4IOA|1|X|U|1939","4IOA|1|X|C|1940"],"HL_2QBG_051":["2QBG|1|B|G|1949","2QBG|1|B|G|1950","2QBG|1|B|U|1951","2QBG|1|B|A|1952","2QBG|1|B|A|1953","2QBG|1|B|G|1954","2QBG|1|B|U|1956","2QBG|1|B|C|1957"],"HL_1S72_051":["1S72|1|0|C|1990","1S72|1|0|A|1991","1S72|1|0|U|1992","1S72|1|0|C|1993","1S72|1|0|A|1994","1S72|1|0|G|1995","1S72|1|0|A|1997","1S72|1|0|G|1998"],"HL_1VW3_036":["1VW3|1|A|U|1849","1VW3|1|A|A|1850","1VW3|1|A|U|1851","1VW3|1|A|A|1852","1VW3|1|A|A|1853","1VW3|1|A|U|1854","1VW3|1|A|G|1856","1VW3|1|A|A|1857"],"HL_4CUV_050":["4CUV|1|1|U|2292","4CUV|1|1|C|2293","4CUV|1|1|U|2294","4CUV|1|1|A|2295","4CUV|1|1|A|2296","4CUV|1|1|U|2297","4CUV|1|1|A|2299","4CUV|1|1|G|2300"],"HL_4A1B_049":["4A1B|1|1|U|2287","4A1B|1|1|C|2288","4A1B|1|1|U|2289","4A1B|1|1|A|2290","4A1B|1|1|A|2291","4A1B|1|1|U|2292","4A1B|1|1|A|2294","4A1B|1|1|G|2295"],"HL_3U5H_050":["3U5H|1|5|U|2292","3U5H|1|5|C|2293","3U5H|1|5|U|2294","3U5H|1|5|A|2295","3U5H|1|5|A|2296","3U5H|1|5|U|2297","3U5H|1|5|A|2299","3U5H|1|5|G|2300"],"HL_1VX6_050":["1VX6|1|A|U|2585","1VX6|1|A|C|2586","1VX6|1|A|U|2587","1VX6|1|A|A|2588","1VX6|1|A|A|2589","1VX6|1|A|U|2590","1VX6|1|A|A|2592","1VX6|1|A|G|2593"]},"motif_id":"HL_01926.6","chainbreak":-1,"common_name":"LSU Helix 71 (H71) Hairpin Loop.","annotation":"","bp_signature":"cWW-bif-R-tSH-R"},
{"num_instances":1,"num_nucleotides":5,"alignment":{"HL_3U5F_013":["3U5F|1|6|C|491","3U5F|1|6|A|492","3U5F|1|6|U|493","3U5F|1|6|U|494","3U5F|1|6|G|496"]},"motif_id":"HL_03785.1","chainbreak":-1,"common_name":"LSU Helix 8 (H8) Hairpin Loop","annotation":"","bp_signature":"cWW-R-R"},
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{"num_instances":1,"num_nucleotides":6,"alignment":{"HL_2QBG_018":["2QBG|1|B|G|543","2QBG|1|B|C|544","2QBG|1|B|U|545","2QBG|1|B|A|547","2QBG|1|B|G|548","2QBG|1|B|C|550"]},"motif_id":"HL_04382.1","chainbreak":-1,"common_name":"","annotation":"","bp_signature":"cWW-R-R-R"},
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{"num_instances":1,"num_nucleotides":9,"alignment":{"HL_1VW3_059":["1VW3|1|A|U|3135","1VW3|1|A|U|3136","1VW3|1|A|A|3137","1VW3|1|A|U|3138","1VW3|1|A|A|3139","1VW3|1|A|C|3140","1VW3|1|A|U|3141","1VW3|1|A|A|3142","1VW3|1|A|A|3143"]},"motif_id":"HL_04979.1","chainbreak":-1,"common_name":"LSU Helix 99A (H99A) Hairpin Loop. Closed by cSW AA.","annotation":"Very conserved. Closed by cSW AA pair","bp_signature":"cWW-cSW-R-R-R-R"},
{"num_instances":0,"num_nucleotides":0,"alignment":[],"motif_id":"HL_05113.1","chainbreak":-1,"common_name":"","annotation":"","bp_signature":"cWW-R-R-R-R"},
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{"num_instances":0,"num_nucleotides":0,"alignment":[],"motif_id":"HL_08203.1","chainbreak":-1,"common_name":"","annotation":"","bp_signature":"cWW-cWW-tWH-tHH-R"},
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