#IFECompound(s)RNA source organismTitleMethodResolutionDate
14YBB|1|DA (rep)23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
24YBB|1|CA23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
37K00|1|a23S rRNAEscherichia coliStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982020-09-23
46XZ7|1|A23S rRNAEscherichia coliE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12020-07-22
56PJ6|1|I23S rRNAEscherichia coliHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22020-01-22
67N1P|1|2323S rRNAEscherichia coli K-12Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332021-07-14
77PJS|1|A23S ribosomal RNAEscherichia coliStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352021-10-20
87S1H|1|I23S rRNAEscherichia coliWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352021-11-17
97O1A|1|BARibosomal RNA 23SEscherichia coli K-12Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42021-09-01
107S1G|1|I23S rRNAEscherichia coliwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482021-11-17
117BL4|1|A23S ribosomal RNAEscherichia coli K-12in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42021-05-12
126PCR|1|I23S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52020-06-17
136PC6|1|I23S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52020-06-17
146PC7|1|I23S ribosomal RNAEscherichia coliE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52020-06-17

Release history

Release3.2053.2063.207
Date2021-11-172021-11-242021-12-01

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_83717.85NR_2.5_83717.843.205(12) 7PJS|1|A, 7O1A|1|BA, 7N1P|1|23, 7K00|1|a, 7BL4|1|A, 6XZ7|1|A, 6PJ6|1|I, 6PCR|1|I, 6PC7|1|I, 6PC6|1|I, 4YBB|1|DA, 4YBB|1|CA(2) 7S1H|1|I, 7S1G|1|I(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_83717.85NR_2.5_83717.863.208(14) 4YBB|1|CA, 7S1G|1|I, 7PJS|1|A, 7O1A|1|BA, 7N1P|1|23, 7K00|1|a, 7BL4|1|A, 6XZ7|1|A, 6PJ6|1|I, 6PCR|1|I, 6PC7|1|I, 6PC6|1|I, 4YBB|1|DA, 7S1H|1|I(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
26PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22874
36PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52876
46PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52876
56PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52876
67BL4|1|Ain vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42897
77O1A|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42874
87PJS|1|AStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352880
97S1G|1|Iwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482874
107S1H|1|IWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352876
117N1P|1|23Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332882
127K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982729
136XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12876
144YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883