#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15UED|1|A+ 5UED|1|B (rep)RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')GX-ray diffraction1.52017-07-05
26C8J|1|A+ 6C8J|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 15 min soakingX-ray diffraction1.52018-05-30
36C8D|1|A+ 6C8D|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-dGMP complex with Mg ionX-ray diffraction1.922018-05-30
46C8I|1|A+ 6C8I|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 5 min soakingX-ray diffraction1.772018-05-30
55UEE|1|A+ 5UEE|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')GX-ray diffraction1.92017-07-05
66C8L|1|A+ 6C8L|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 1h soakingX-ray diffraction2.252018-05-30
76C8E|1|A+ 6C8E|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-imidazolium-bridged intermediate complex, 4h soakingX-ray diffraction1.82018-05-30
85UEF|1|A+ 5UEF|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-ray diffraction2.12017-07-05
96C8K|1|A+ 6C8K|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-activated 2-AIpG monomer complex, 30 min soakingX-ray diffraction2.262018-05-30
106CAB|1|A+ 6CAB|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA-dGMP complex with Sr ionX-ray diffraction2.52018-05-30
115UEG|1|A+ 5UEG|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-ray diffraction2.62017-07-05
125UEG|1|C+ 5UEG|1|DRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-ray diffraction2.62017-07-05

Release history

Release3.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.114
Date2018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-19

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16CAB|1|A+6CAB|1|BRNA-dGMP complex with Sr ionX-RAY DIFFRACTION2.512
26C8L|1|A+6C8L|1|BRNA-activated 2-AIpG monomer complex, 1h soakingX-RAY DIFFRACTION2.2510
36C8K|1|A+6C8K|1|BRNA-activated 2-AIpG monomer complex, 30 min soakingX-RAY DIFFRACTION2.2610
45UEE|1|A+5UEE|1|BRNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')GX-RAY DIFFRACTION1.911
56C8E|1|A+6C8E|1|BRNA-imidazolium-bridged intermediate complex, 4h soakingX-RAY DIFFRACTION1.810
66C8J|1|A+6C8J|1|BRNA-activated 2-AIpG monomer complex, 15 min soakingX-RAY DIFFRACTION1.510
76C8D|1|A+6C8D|1|BRNA-dGMP complex with Mg ionX-RAY DIFFRACTION1.9210
85UEG|1|C+5UEG|1|DRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-RAY DIFFRACTION2.611
95UEG|1|A+5UEG|1|BRNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligandX-RAY DIFFRACTION2.611
105UEF|1|A+5UEF|1|BRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.111
115UED|1|A+5UED|1|BRNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')GX-RAY DIFFRACTION1.511
126C8I|1|A+6C8I|1|BRNA-activated 2-AIpG monomer complex, 5 min soakingX-RAY DIFFRACTION1.7710
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