#IFECompound(s)RNA source organismTitleMethodResolutionDate
16ELZ|1|6 (rep)Internal transcribed spacer 2Saccharomyces cerevisiaeState E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesELECTRON MICROSCOPY3.32017-12-27
26C0F|1|6ITS2Saccharomyces cerevisiaeYeast nucleolar pre-60S ribosomal subunit (state 2)ELECTRON MICROSCOPY3.72018-03-14
33JCT|1|6ITS2-1 miscRNASaccharomyces cerevisiaeCryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.082016-06-01
46EM1|1|65.8S ribosomal RNASaccharomyces cerevisiaeState C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.62017-12-27
56YLY|1|6ITS2Saccharomyces cerevisiaepre-60S State NE2 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.82020-07-29
66YLX|1|6ITS2Saccharomyces cerevisiaepre-60S State NE1 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.92020-07-29
76CB1|1|6ITS2Saccharomyces cerevisiaeYeast nucleolar pre-60S ribosomal subunit (state 3)ELECTRON MICROSCOPY4.62018-03-14
85Z3G|1|CITS2 RNASaccharomyces cerevisiaeCryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)ELECTRON MICROSCOPY3.652018-04-11

Release history

Release3.1373.1383.1393.140
Date2020-07-292020-08-052020-08-122020-08-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_18489.3NR_20.0_18489.23.137(6) 6EM1|1|6, 6ELZ|1|6, 6CB1|1|6, 6C0F|1|6, 5Z3G|1|C, 3JCT|1|6(2) 6YLY|1|6, 6YLX|1|6(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_18489.3NR_20.0_18489.43.141(8) 3JCT|1|6, 6YLY|1|6, 6YLX|1|6, 6EM1|1|6, 6ELZ|1|6, 6CB1|1|6, 6C0F|1|6, 5Z3G|1|C(0) (1) 6M62|1|6

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16ELZ|1|6State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesELECTRON MICROSCOPY3.365
26EM1|1|6State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.665
33JCT|1|6Cryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.0865
46C0F|1|6Yeast nucleolar pre-60S ribosomal subunit (state 2)ELECTRON MICROSCOPY3.787
56CB1|1|6Yeast nucleolar pre-60S ribosomal subunit (state 3)ELECTRON MICROSCOPY4.687
65Z3G|1|CCryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)ELECTRON MICROSCOPY3.6565
76YLX|1|6pre-60S State NE1 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.965
86YLY|1|6pre-60S State NE2 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.865