#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17MDZ|1|2 (rep)Transfer RNAP-site tRNA, mRNAOryctolagus cuniculusEukaryaRF0000580S rabbit ribosome stalled with benzamide-CHXElectron microscopy3.22021-09-01
26HCJ|1|q3Transfer RNAA/P RNA, mRNAOryctolagus cuniculusEukaryaRF00005Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsElectron microscopy3.82018-10-17
36HCQ|1|q3Transfer RNAA/P tRNA, mRNAOryctolagus cuniculusEukaryaRF00005Structure of the rabbit collided di-ribosome (collided monosome)Electron microscopy6.52018-10-17
44UJE|1|AVTransfer RNATRNA-LYS, Messenger RNAOryctolagus cuniculusEukaryaRF00005Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangementElectron microscopy6.92014-07-16
53J0O|1|VTransfer RNAtRNA, mRNA fragmentOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2Electron microscopy92011-11-16
63J0O|1|WTransfer RNAtRNAOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2Electron microscopy92011-11-16
73J0O|1|YTransfer RNAtRNA, mRNA fragmentOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2Electron microscopy92011-11-16
84UJD|1|BATransfer RNATRNAOryctolagus cuniculusEukaryaRF00005mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateElectron microscopy8.92014-07-30
93J0L|1|VTransfer RNAtRNA, mRNA fragmentOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1Electron microscopy9.82011-11-16
103J0L|1|WTransfer RNAtRNAOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1Electron microscopy9.82011-11-16
113J0L|1|YTransfer RNAtRNA, mRNA fragmentOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1Electron microscopy9.82011-11-16
124UJC|1|AATransfer RNATRNAOryctolagus cuniculusEukaryaRF00005mammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateElectron microscopy9.52014-07-30
133J0P|1|YTransfer RNAtRNA, mRNA fragmentOryctolagus cuniculusEukaryaRF00005Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1Electron microscopy10.62011-11-16

Release history

Release3.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.333
Date2021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-01

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_22323.3NR_20.0_22323.23.194(12) 3J0L|1|V, 6HCQ|1|q3, 6HCJ|1|q3, 4UJE|1|AV, 4UJD|1|BA, 4UJC|1|AA, 3J0P|1|Y, 3J0O|1|Y, 3J0O|1|W, 3J0O|1|V, 3J0L|1|Y, 3J0L|1|W(1) 7MDZ|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16HCQ|1|q3Structure of the rabbit collided di-ribosome (collided monosome)ELECTRON MICROSCOPY6.574
26HCJ|1|q3Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.874
33J0L|1|YCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.875
43J0P|1|YCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1ELECTRON MICROSCOPY10.675
53J0O|1|YCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY975
63J0L|1|WCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.876
73J0O|1|WCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY976
84UJD|1|BAmammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateELECTRON MICROSCOPY8.976
94UJC|1|AAmammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateELECTRON MICROSCOPY9.576
103J0L|1|VCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.875
113J0O|1|VCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY975
124UJE|1|AVRegulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangementELECTRON MICROSCOPY6.976
137MDZ|1|280S rabbit ribosome stalled with benzamide-CHXELECTRON MICROSCOPY3.276
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