Equivalence class NR_20.0_32911.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6CMN|1|D (rep) | Trans-Activation Response RNA Element | Human immunodeficiency virus 1 | Viruses | Co-Crystal Structure of HIV-1 TAR Bound to Lab-Evolved RRM TBP6.7 | X-ray diffraction | 1.8 | 2018-06-06 | ||
| 2 | 6CYT|1|N | RNA (5'-R(P*AP*UP*CP*UP*GP*AP*GP*CP*CP*UP*GP*GP*GP*AP*GP*CP*U)-3') | Human immunodeficiency virus 1 | Viruses | HIV-1 TAR loop in complex with Tat:AFF4:P-TEFb | X-ray diffraction | 3.5 | 2018-12-12 | ||
| 3 | 5L1Z|1|N | RNA (5'-R(P*AP*GP*AP*UP*CP*UP*GP*AP*GP*CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*UP*CP*U)-3') | Human immunodeficiency virus 1 | Viruses | TAR complex with HIV-1 Tat-AFF4-P-TEFb | X-ray diffraction | 5.9 | 2016-10-26 |
Release history
| Release | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-02-01 | 2019-02-08 | 2019-02-15 | 2019-02-22 | 2019-03-01 | 2019-03-08 | 2019-03-15 | 2019-03-22 | 2019-03-29 | 2019-04-05 | 2019-04-12 | 2019-04-19 | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_20.0_32911.1 | NR_20.0_82132.1 | 3.59 | (3) 5L1Z|1|N, 6CMN|1|D, 6CYT|1|N | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_32911.1 | NR_20.0_18349.1 | 3.98 | (1) 6CYT|1|N | (2) 5L1Z|1|N, 6CMN|1|D | (0) |
| NR_20.0_32911.1 | NR_20.0_83767.1 | 3.98 | (1) 6CMN|1|D | (2) 6CYT|1|N, 5L1Z|1|N | (0) |
| NR_20.0_32911.1 | NR_20.0_85979.1 | 3.98 | (1) 5L1Z|1|N | (2) 6CYT|1|N, 6CMN|1|D | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).