NR_20.0_35542.2

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#	IFE	Standardized name	Molecule	Organism	Domain	Rfam	Title	Method	Å	Date
1	4P70\|1\|XV (rep)	Transfer RNA	P-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)	Escherichia coli	Bacteria	RF00005	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-ray diffraction	3.68	2014-08-13
2	4V9R\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
3	4V9S\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
4	4V7B\|1\|AV	Transfer RNA	modified formyl-methionine specific initiator transfer RNA, messenger RNA	Escherichia coli	Bacteria	RF00005	Visualization of two tRNAs trapped in transit during EF-G-mediated translocation	Electron microscopy	6.8	2014-07-09
5	4V5F\|1\|AV	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNA	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
6	4V9S\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
7	4V9R\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
8	4V7M\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
9	4V67\|1\|AY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
10	4V63\|1\|AY	Transfer RNA	P and E-site tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
11	4V87\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
12	4V8F\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
13	4V9I\|1\|CV	Transfer RNA	P-SITE tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
14	4V6A\|1\|CW	Transfer RNA	tRNA-Met, RNA (5'-R(PAPAPAPUP*G)-3')	Escherichia coli	Bacteria	RF00005	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
15	4V63\|1\|CY	Transfer RNA	P and E-site tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
16	4V67\|1\|CY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
17	4V8C\|1\|DC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
18	4V5F\|1\|CV	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNA	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
19	4V8B\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
20	4V63\|1\|AZ	Transfer RNA	P and E-site tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
21	4V67\|1\|AZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
22	4V8E\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
23	4V8Q\|1\|BV	Transfer RNA	E-SITE or P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
24	4V8B\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
25	4V6G\|1\|CC	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
26	4V8C\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
27	4V8J\|1\|CV	Transfer RNA	tRNA-fMet, tRNA-Phe, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G347U.	X-ray diffraction	3.9	2014-07-09
28	4V63\|1\|CZ	Transfer RNA	P and E-site tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
29	4V67\|1\|CZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
30	4V8E\|1\|DC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
31	4P70\|1\|QV	Transfer RNA	P-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)	Escherichia coli	Bacteria	RF00005	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-ray diffraction	3.68	2014-08-13
32	4LT8\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL Pro	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
33	4P6F\|1\|XV	Transfer RNA	tRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-ray diffraction	3.6	2014-10-01
34	4LT8\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL Pro	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
35	4LNT\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
36	3CW5\|1\|A	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	E. coli Initiator tRNA	X-ray diffraction	3.1	2008-09-02
37	4W2G\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
38	4W2F\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
39	4W2H\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
40	4W2I\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
41	1VY5\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
42	4W2I\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
43	1VY5\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
44	4W2F\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
45	4W2G\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
46	4V4Z\|1\|AC	Transfer RNA	tRNA fMET (unmodified bases), mRNA	Escherichia coli	Bacteria	RF00005	70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.	X-ray diffraction	4.51	2014-07-09
47	4V5C\|1\|AV	Transfer RNA	P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
48	1VY7\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
49	1VY6\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
50	1VY4\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
51	1VY6\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
52	4WPO\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
53	4V8D\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
54	4V9I\|1\|AV	Transfer RNA	P-SITE tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
55	4V6A\|1\|AW	Transfer RNA	tRNA-Met, RNA (5'-R(PAPAPAPUP*G)-3')	Escherichia coli	Bacteria	RF00005	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
56	4V87\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
57	4V7M\|1\|CX	Transfer RNA	RNA (77-MER), RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
58	3J5S\|1\|E	Transfer RNA	P-site tRNA FMet	Escherichia coli	Bacteria	RF00005	EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics	Electron microscopy	7.5	2014-01-08
59	3J78\|1\|ET	Transfer RNA	P/E-site initiator transfer RNAfMet	Escherichia coli	Bacteria	RF00005	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	Electron microscopy	6.3	2014-08-06
60	3J77\|1\|PT	Transfer RNA	P/E-site initiator transfer RNAfMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	Electron microscopy	6.2	2014-08-06
61	4LNT\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
62	4P6F\|1\|QV	Transfer RNA	tRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-ray diffraction	3.6	2014-10-01
63	3CW6\|1\|A	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	E. coli Initiator tRNA	X-ray diffraction	3.3	2008-09-02
64	4V6Y\|1\|A3	Transfer RNA	tRNA-fMet, 5'-R(APCPUPAPUPGPGPUPUPUPUPUPAPUP*U)-3'	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)	Electron microscopy	12	2014-07-09
65	4V73\|1\|A3	Transfer RNA	tRNA-fMet, 5'-R(APCPUPAPUPGPGPUPUPUPUPUPAPUP*U)-3'	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)	Electron microscopy	15	2014-07-09
66	4V6R\|1\|AD	Transfer RNA	P site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)	Electron microscopy	11.5	2014-07-09
67	4WQY\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
68	4V8D\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
69	4V97\|1\|CV	Transfer RNA	P-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G299A.	X-ray diffraction	3.52	2014-07-09
70	3J78\|1\|PT	Transfer RNA	P/E-site initiator transfer RNAfMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	Electron microscopy	6.3	2014-08-06
71	1VVJ\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
72	4LSK\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
73	4L71\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-ray diffraction	3.9	2014-08-06
74	4LFZ\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-ray diffraction	3.92	2014-08-06
75	4LEL\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.9	2014-08-06
76	4LFZ\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-ray diffraction	3.92	2014-08-06
77	4L71\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-ray diffraction	3.9	2014-08-06
78	4LEL\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.9	2014-08-06
79	1VVJ\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
80	4LSK\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
81	4WPO\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
82	4V6G\|1\|CB	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
83	4V6Z\|1\|A3	Transfer RNA	tRNA-fMet, 5'-R(APCPUPAPUPGPGPUPUPUPUPUPAPUP*U)-3'	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)	Electron microscopy	12	2014-07-09
84	4V6P\|1\|AD	Transfer RNA	P site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)	Electron microscopy	13.5	2014-07-09
85	4V6O\|1\|AD	Transfer RNA	P site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)	Electron microscopy	14.7	2014-07-09
86	4W2H\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
87	4WQY\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
88	4V69\|1\|AV	Transfer RNA	E-site tRNA Phe, mRNA	Escherichia coli	Bacteria	RF00005	Ternary complex-bound E.coli 70S ribosome.	Electron microscopy	6.7	2014-07-09
89	4V51\|1\|AV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
90	3DEG\|1\|B	Transfer RNA	P-tRNA	Escherichia coli	Bacteria	RF00005	Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP	Electron microscopy	10.9	2008-08-19
91	4V51\|1\|CV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
92	4V5F\|1\|CW	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
93	4V6G\|1\|AC	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
94	4V5K\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
95	4V97\|1\|AV	Transfer RNA	P-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G299A.	X-ray diffraction	3.52	2014-07-09
96	4V7P\|1\|AW	Transfer RNA	P-site tRNA-fMet, messenger RNA (5'-R(APAPUPGPUPAP*G)-3')	Escherichia coli	Bacteria	RF00005	Recognition of the amber stop codon by release factor RF1.	X-ray diffraction	3.62	2014-07-09
97	4V7L\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
98	4V7P\|1\|DW	Transfer RNA	P-site tRNA-fMet, messenger RNA (5'-R(APAPUPGPUPAP*G)-3')	Escherichia coli	Bacteria	RF00005	Recognition of the amber stop codon by release factor RF1.	X-ray diffraction	3.62	2014-07-09
99	1VY7\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
100	1VY4\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
101	4V6V\|1\|A3	Transfer RNA	P-tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Tetracycline resistance protein Tet(O) bound to the ribosome	Electron microscopy	9.8	2014-07-09
102	4V74\|1\|A3	Transfer RNA	tRNA-fMet, 5'-R(APCPUPAPUPGPGPUPUPUPUPUPAPUP*U)-3'	Escherichia coli	Bacteria	RF00005	70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)	Electron microscopy	17	2014-07-09
103	4V72\|1\|A3	Transfer RNA	tRNA-fMet, 5'-R(APCPUPAPUPGPGPUPUPUPUPUPAPUP*U)-3'	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)	Electron microscopy	13	2014-07-09
104	4V71\|1\|A3	Transfer RNA	tRNA-fMet, 5'-R(APCPUPAPUPGPGPUPUPUPUPUPAPUP*U)-3'	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)	Electron microscopy	20	2014-07-09
105	4V70\|1\|A3	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)	Electron microscopy	17	2014-07-09
106	4V6Q\|1\|AD	Transfer RNA	P site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)	Electron microscopy	11.5	2014-07-09
107	4V6S\|1\|BC	Transfer RNA	P site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)	Electron microscopy	13.1	2014-07-09
108	2FMT\|1\|C	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
109	2FMT\|1\|D	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
110	4V5C\|1\|CV	Transfer RNA	P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
111	4V8F\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
112	4V6G\|1\|CD	Transfer RNA	TRNA FMET (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
113	4V78\|1\|A3	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)	Electron microscopy	20	2014-07-09
114	4V79\|1\|A3	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)	Electron microscopy	15	2014-07-09
115	4V77\|1\|A3	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)	Electron microscopy	17	2014-07-09
116	4V4X\|1\|AC	Transfer RNA	tRNA fMET (unmodified bases)	Escherichia coli	Bacteria	RF00005	Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.	X-ray diffraction	5	2014-07-09
117	4V8J\|1\|AV	Transfer RNA	tRNA-fMet, tRNA-Phe, messenger RNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the bacterial ribosome ram mutation G347U.	X-ray diffraction	3.9	2014-07-09
118	4V5K\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
119	3V11\|1\|D	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	Structure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNA	X-ray diffraction	5	2012-03-28
120	4V75\|1\|A3	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)	Electron microscopy	12	2014-07-09
121	4V76\|1\|A3	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)	Electron microscopy	17	2014-07-09
122	4V6G\|1\|AD	Transfer RNA	TRNA FMET (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
123	4V7L\|1\|CX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
124	4V6N\|1\|BD	Transfer RNA	P site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)	Electron microscopy	12.1	2014-07-09
125	4V5F\|1\|AW	Transfer RNA	E-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)	Escherichia coli	Bacteria	RF00005	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-ray diffraction	3.6	2014-07-09
126	4V8Q\|1\|BW	Transfer RNA	E-SITE or P-SITE TRNA FMET	Escherichia coli	Bacteria	RF00005	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
127	4V8O\|1\|AV	Transfer RNA	PE HYBRID STATE TRNA FMET, MRNA 5'-R(APAPAPAPAPAPUPGP*UP)-3'	Escherichia coli	Bacteria	RF00005	Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3	X-ray diffraction	3.8	2014-07-09
128	4V6T\|1\|AX	Transfer RNA	formyl-methionine specific initiator transfer RNA	Escherichia coli	Bacteria	RF00005	Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading	Electron microscopy	8.3	2014-07-09
129	4V8C\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
130	4V8B\|1\|AD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
131	4V87\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
132	4V8C\|1\|DD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
133	4V87\|1\|BD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
134	4V8B\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
135	3QSY\|1\|D	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea	X-ray diffraction	3.2	2012-03-21
136	4V5K\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
137	4V5K\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
138	1EG0\|1\|O	Transfer RNA	FORMYL-METHIONYL-TRNA	Escherichia coli	Bacteria	RF00005	FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME	Electron microscopy	11.5	2000-03-06

Release history

Release	2.8	2.9	2.10	2.11	2.12	2.13
Date	2015-01-30	2015-02-06	2015-02-13	2015-02-20	2015-02-27	2015-03-06

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_20.0_35542.2	NR_all_35542.1	2.8	(134) 4LNT\|1\|XV, 4V7P\|1\|DW, 4V97\|1\|AV, 4V63\|1\|CY, 3CW5\|1\|A, 4V70\|1\|A3, 4P70\|1\|XV, 4V8B\|1\|CD, 4V6A\|1\|CW, 4W2F\|1\|CX, 3V11\|1\|D, 4V78\|1\|A3, 4V8E\|1\|DC, 4V5F\|1\|CV, 1VY5\|1\|AX, 4V6P\|1\|AD, 4V63\|1\|AZ, 4V6Z\|1\|A3, 4V6A\|1\|AW, 4W2F\|1\|AX, 4V5F\|1\|AW, 4V6O\|1\|AD, 4LNT\|1\|QV, 4V7P\|1\|AW, 4V8Q\|1\|BW, 2FMT\|1\|D, 4P70\|1\|QV, 4V8B\|1\|CC, 4V9S\|1\|CX, 3QSY\|1\|D, 4V77\|1\|A3, 4V8E\|1\|BC, 1VY4\|1\|CX, 4V63\|1\|AY, 4V6Y\|1\|A3, 4V69\|1\|AV, 4V5F\|1\|AV, 4V6N\|1\|BD, 4W2I\|1\|CX, 4LFZ\|1\|XV, 4V7M\|1\|CX, 4V8Q\|1\|BV, 2FMT\|1\|C, 4P6F\|1\|XV, 4V8B\|1\|AD, 4V9S\|1\|AX, 3J78\|1\|PT, 4V76\|1\|A3, 4V8D\|1\|CC, 1VY4\|1\|AX, 4V5K\|1\|CW, 4V6V\|1\|A3, 4V67\|1\|CZ, 4V75\|1\|A3, 4V5C\|1\|CV, 4V6G\|1\|CD, 4W2I\|1\|AX, 4V8O\|1\|AV, 1VY7\|1\|CX, 4P6F\|1\|QV, 4V8B\|1\|AC, 4V9R\|1\|CX, 3J78\|1\|ET, 4V8D\|1\|AC, 1VVJ\|1\|XV, 4LFZ\|1\|QV, 4V7M\|1\|AX, 4V5K\|1\|CV, 4V6T\|1\|AX, 4V67\|1\|CY, 4V74\|1\|A3, 4V5C\|1\|AV, 4V6G\|1\|CC, 4W2H\|1\|CX, 4V8J\|1\|CV, 1VY7\|1\|AX, 4LT8\|1\|XV, 4V87\|1\|CD, 4V9R\|1\|AX, 3J77\|1\|PT, 4V51\|1\|CV, 4V8C\|1\|DD, 1VVJ\|1\|QV, 4LEL\|1\|XV, 4V7L\|1\|CX, 4V5K\|1\|AW, 4V6S\|1\|BC, 4V67\|1\|AZ, 4V73\|1\|A3, 4V6G\|1\|CB, 4W2H\|1\|AX, 4V8J\|1\|AV, 1VY6\|1\|CX, 4LT8\|1	(4) 4WQY\|1\|BX, 4WPO\|1\|BX, 4WPO\|1\|DX, 4WQY\|1\|DX	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	4V79\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)	ELECTRON MICROSCOPY	15	72
2	4V6P\|1\|AD	Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)	ELECTRON MICROSCOPY	13.5	72
3	4V74\|1\|A3	70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)	ELECTRON MICROSCOPY	17	72
4	4V75\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)	ELECTRON MICROSCOPY	12	72
5	4V76\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)	ELECTRON MICROSCOPY	17	72
6	4V73\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)	ELECTRON MICROSCOPY	15	72
7	4V78\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)	ELECTRON MICROSCOPY	20	72
8	4V6Q\|1\|AD	Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)	ELECTRON MICROSCOPY	11.5	72
9	4V6R\|1\|AD	Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)	ELECTRON MICROSCOPY	11.5	72
10	4V6O\|1\|AD	Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)	ELECTRON MICROSCOPY	14.7	72
11	4V6N\|1\|BD	Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)	ELECTRON MICROSCOPY	12.1	72
12	4V6S\|1\|BC	Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)	ELECTRON MICROSCOPY	13.1	72
13	4V6V\|1\|A3	Tetracycline resistance protein Tet(O) bound to the ribosome	ELECTRON MICROSCOPY	9.8	72
14	4V4Z\|1\|AC	70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.	X-RAY DIFFRACTION	4.51	76
15	4V4X\|1\|AC	Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.	X-RAY DIFFRACTION	5	76
16	4V71\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)	ELECTRON MICROSCOPY	20	72
17	1VY7\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
18	4V7L\|1\|CX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
19	4V7L\|1\|AX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
20	4V7M\|1\|AX	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	77
21	4V7M\|1\|CX	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	77
22	4V5C\|1\|AV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
23	4V9I\|1\|CV	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	77
24	3DEG\|1\|B	Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP	ELECTRON MICROSCOPY	10.9	76
25	4V51\|1\|AV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
26	4V51\|1\|CV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
27	4V9I\|1\|AV	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	77
28	4V7B\|1\|AV	Visualization of two tRNAs trapped in transit during EF-G-mediated translocation	ELECTRON MICROSCOPY	6.8	76
29	4V5F\|1\|AV	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
30	4V5F\|1\|CV	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
31	1VY6\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
32	4WQY\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
33	4WPO\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
34	1VY4\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
35	1VY5\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
36	4W2G\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
37	4W2F\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
38	4W2I\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
39	4W2H\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
40	4V9R\|1\|CX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
41	4V9S\|1\|CX	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	76
42	4V6A\|1\|CW	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	77
43	4V63\|1\|CY	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
44	4V63\|1\|AY	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
45	4V7P\|1\|DW	Recognition of the amber stop codon by release factor RF1.	X-RAY DIFFRACTION	3.62	77
46	4V7P\|1\|AW	Recognition of the amber stop codon by release factor RF1.	X-RAY DIFFRACTION	3.62	77
47	4V67\|1\|AY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
48	4V67\|1\|CY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
49	4V8Q\|1\|BV	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	77
50	4V6A\|1\|AW	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	77
51	4P70\|1\|XV	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-RAY DIFFRACTION	3.68	77
52	4P6F\|1\|XV	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-RAY DIFFRACTION	3.6	77
53	4LNT\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
54	4LEL\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.9	77
55	4L71\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-RAY DIFFRACTION	3.9	77
56	4LSK\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	77
57	4LEL\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.9	77
58	4LFZ\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-RAY DIFFRACTION	3.92	77
59	4LSK\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	77
60	4LT8\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	77
61	4P6F\|1\|QV	Crystal structure of the peptolide 12C bound to bacterial ribosome	X-RAY DIFFRACTION	3.6	77
62	4LNT\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
63	4LT8\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	77
64	1VVJ\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	77
65	4LFZ\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin	X-RAY DIFFRACTION	3.92	77
66	4L71\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome	X-RAY DIFFRACTION	3.9	77
67	1VVJ\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	77
68	4P70\|1\|QV	Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome	X-RAY DIFFRACTION	3.68	77
69	4V8J\|1\|AV	Crystal structure of the bacterial ribosome ram mutation G347U.	X-RAY DIFFRACTION	3.9	77
70	4V97\|1\|AV	Crystal structure of the bacterial ribosome ram mutation G299A.	X-RAY DIFFRACTION	3.52	77
71	4V97\|1\|CV	Crystal structure of the bacterial ribosome ram mutation G299A.	X-RAY DIFFRACTION	3.52	77
72	4V8J\|1\|CV	Crystal structure of the bacterial ribosome ram mutation G347U.	X-RAY DIFFRACTION	3.9	77
73	3J78\|1\|PT	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	ELECTRON MICROSCOPY	6.3	77
74	4V6G\|1\|AC	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
75	3J5S\|1\|E	EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics	ELECTRON MICROSCOPY	7.5	77
76	4V69\|1\|AV	Ternary complex-bound E.coli 70S ribosome.	ELECTRON MICROSCOPY	6.7	76
77	4V5K\|1\|CV	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
78	4V5C\|1\|CV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
79	4V5K\|1\|AV	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
80	4V8D\|1\|AC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
81	4V8F\|1\|BC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
82	4V8E\|1\|BC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	77
83	4V8E\|1\|DC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	77
84	4W2I\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
85	1VY4\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
86	1VY5\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
87	4W2G\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
88	1VY7\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
89	1VY6\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
90	4W2F\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
91	4WPO\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
92	4WQY\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
93	4V9S\|1\|AX	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	76
94	4V9R\|1\|AX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
95	4W2H\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
96	4V6G\|1\|CC	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
97	4V8B\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
98	4V87\|1\|CC	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
99	4V8B\|1\|AC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
100	4V87\|1\|BC	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
101	4V8C\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
102	4V8C\|1\|DC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
103	4V8D\|1\|CC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
104	4V8F\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
105	4V6Z\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)	ELECTRON MICROSCOPY	12	72
106	4V6Y\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)	ELECTRON MICROSCOPY	12	72
107	4V6G\|1\|CB	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	65
108	4V6G\|1\|AD	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
109	4V87\|1\|CD	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
110	4V8B\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
111	4V8C\|1\|DD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
112	4V8C\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
113	4V8B\|1\|AD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
114	4V87\|1\|BD	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
115	4V6G\|1\|CD	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
116	4V67\|1\|CZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
117	4V67\|1\|AZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
118	4V63\|1\|AZ	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
119	4V63\|1\|CZ	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
120	4V8Q\|1\|BW	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	77
121	4V5K\|1\|AW	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
122	4V5K\|1\|CW	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
123	4V5F\|1\|CW	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
124	4V5F\|1\|AW	The structure of the ribosome with elongation factor G trapped in the post-translocational state	X-RAY DIFFRACTION	3.6	76
125	4V77\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)	ELECTRON MICROSCOPY	17	72
126	4V70\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)	ELECTRON MICROSCOPY	17	72
127	4V72\|1\|A3	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)	ELECTRON MICROSCOPY	13	72
128	4V6T\|1\|AX	Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading	ELECTRON MICROSCOPY	8.3	77
129	4V8O\|1\|AV	Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3	X-RAY DIFFRACTION	3.8	77
130	3J77\|1\|PT	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	ELECTRON MICROSCOPY	6.2	77
131	3J78\|1\|ET	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	ELECTRON MICROSCOPY	6.3	77
132	3V11\|1\|D	Structure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNA	X-RAY DIFFRACTION	5	71
133	3CW5\|1\|A	E. coli Initiator tRNA	X-RAY DIFFRACTION	3.1	72
134	3CW6\|1\|A	E. coli Initiator tRNA	X-RAY DIFFRACTION	3.3	72
135	2FMT\|1\|D	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
136	2FMT\|1\|C	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
137	3QSY\|1\|D	Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea	X-RAY DIFFRACTION	3.2	77
138	1EG0\|1\|O	FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME	ELECTRON MICROSCOPY	11.5	71

Equivalence class NR_20.0_35542.2 Obsolete

Release history

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