#IFECompound(s)RNA source organismTitleMethodResolutionDate
16TPQ|1|U (rep)pre-23S rRNABacillus subtilisRNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072020-09-30
27AQD|1|A23S ribosomal RNABacillus subtilis subsp. subtilis str. 168Structure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12020-11-25
37AQC|1|A23S ribosomal RNABacillus subtilis subsp. subtilis str. 168Structure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992020-11-25
46TNN|1|Upre-23S rRNABacillus subtilisMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072020-09-30
57AS8|1|A23S rRNABacillus subtilis subsp. subtilis str. 168Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY2.92020-12-09
66HA1|1|A23S ribosomal RNABacillus subtilisCryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12018-08-29
77AS9|1|A23S rRNABacillus subtilis subsp. subtilis str. 168Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with peptidyl tRNA in the A/P position and RqcH.ELECTRON MICROSCOPY3.52020-12-23
86HA8|1|A23S rRNABacillus subtilisCryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52018-08-29
95NJT|1|U23S ribosomal RNABacillus subtilisStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82017-06-14
103J9W|1|BA23S ribosomal RNABacillus subtilisCryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92015-04-29
116PPF|1|A23S rRNABacillus subtilisBacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42019-09-18
126PVK|1|A23S rRNABacillus subtilisBacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42019-09-18
136HTQ|1|A23S ribosomal RNABacillus subtilisStringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosomeELECTRON MICROSCOPY4.52019-10-23
146PPK|1|A23S rRNABacillus subtilisRbgA+45SRbgA complexELECTRON MICROSCOPY4.42019-09-18
157ASA|1|A23S rRNABacillus subtilis subsp. subtilis str. 168Bacillus subtilis ribosome-associated quality control complex state B, multibody refinement focussed on RqcH. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY3.52020-12-23
163J3W|1|Aribosome RNA 23SBacillus subtilisAtomic model of the immature 50S subunit from Bacillus subtilis (state II-a)ELECTRON MICROSCOPY10.72013-06-12
173J3V|1|Aribosome RNA 23SBacillus subtilisAtomic model of the immature 50S subunit from Bacillus subtilis (state I-a)ELECTRON MICROSCOPY13.32013-06-12

Release history

Release3.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.187
Date2020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-14

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_41610.10NR_20.0_41610.93.158(15) 3J9W|1|BA, 3J3W|1|A, 3J3V|1|A, 7AS8|1|A, 7AQD|1|A, 7AQC|1|A, 6TPQ|1|U, 6TNN|1|U, 6PVK|1|A, 6PPK|1|A, 6PPF|1|A, 6HTQ|1|A, 6HA8|1|A, 6HA1|1|A, 5NJT|1|U(2) 7AS9|1|A, 7ASA|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_41610.10NR_20.0_41610.113.188(17) 6HTQ|1|A, 6HA8|1|A, 6HA1|1|A, 5NJT|1|U, 3J9W|1|BA, 3J3W|1|A, 7ASA|1|A, 3J3V|1|A, 7AS9|1|A, 7AS8|1|A, 7AQD|1|A, 7AQC|1|A, 6TPQ|1|U, 6TNN|1|U, 6PVK|1|A, 6PPK|1|A, 6PPF|1|A(0) (1) 7OPE|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J3W|1|AAtomic model of the immature 50S subunit from Bacillus subtilis (state II-a)ELECTRON MICROSCOPY10.72685
23J3V|1|AAtomic model of the immature 50S subunit from Bacillus subtilis (state I-a)ELECTRON MICROSCOPY13.32884
36PPF|1|ABacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42471
46PVK|1|ABacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42169
56TPQ|1|URNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072924
66TNN|1|UMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072930
77AQC|1|AStructure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992820
87AQD|1|AStructure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12918
93J9W|1|BACryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92923
105NJT|1|UStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82923
116PPK|1|ARbgA+45SRbgA complexELECTRON MICROSCOPY4.42658
126HA8|1|ACryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52887
137AS9|1|ABacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with peptidyl tRNA in the A/P position and RqcH.ELECTRON MICROSCOPY3.52812
146HTQ|1|AStringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosomeELECTRON MICROSCOPY4.52887
156HA1|1|ACryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12887
167AS8|1|ABacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY2.92812
177ASA|1|ABacillus subtilis ribosome-associated quality control complex state B, multibody refinement focussed on RqcH. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabOELECTRON MICROSCOPY3.582