#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13OL9|1|J+ 3OL9|1|N+ 3OL9|1|K+ 3OL9|1|O+ 3OL9|1|L+ 3OL9|1|P (rep)RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.252010-12-22
23OL6|1|J+ 3OL6|1|N+ 3OL6|1|K+ 3OL6|1|O+ 3OL6|1|L+ 3OL6|1|PRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.52010-12-22
33OLB|1|J+ 3OLB|1|N+ 3OLB|1|K+ 3OLB|1|O+ 3OLB|1|L+ 3OLB|1|PRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.412010-12-22
43OLB|1|B+ 3OLB|1|F+ 3OLB|1|C+ 3OLB|1|G+ 3OLB|1|D+ 3OLB|1|HRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.412010-12-22
53OL7|1|B+ 3OL7|1|F+ 3OL7|1|C+ 3OL7|1|G+ 3OL7|1|D+ 3OL7|1|HRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.72010-12-22
63OL9|1|B+ 3OL9|1|F+ 3OL9|1|C+ 3OL9|1|G+ 3OL9|1|D+ 3OL9|1|HRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.252010-12-22
73OL6|1|B+ 3OL6|1|F+ 3OL6|1|C+ 3OL6|1|G+ 3OL6|1|D+ 3OL6|1|HRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.52010-12-22
83OLA|1|J+ 3OLA|1|N+ 3OLA|1|K+ 3OLA|1|O+ 3OLA|1|L+ 3OLA|1|PRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.552010-12-22
93OL8|1|B+ 3OL8|1|F+ 3OL8|1|C+ 3OL8|1|G+ 3OL8|1|D+ 3OL8|1|HRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.752010-12-22
103OLA|1|B+ 3OLA|1|DRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.552010-12-22
113OLA|1|F+ 3OLA|1|HRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.552010-12-22
123OL8|1|J+ 3OL8|1|N+ 3OL8|1|K+ 3OL8|1|O+ 3OL8|1|L+ 3OL8|1|PRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.752010-12-22
133OL7|1|J+ 3OL7|1|N+ 3OL7|1|K+ 3OL7|1|O+ 3OL7|1|L+ 3OL7|1|PRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.72010-12-22

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13OLB|1|J+3OLB|1|N+3OLB|1|K+3OLB|1|O+3OLB|1|L+3OLB|1|PPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4119
23OLA|1|J+3OLA|1|N+3OLA|1|K+3OLA|1|O+3OLA|1|L+3OLA|1|PPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5518
33OL6|1|J+3OL6|1|N+3OL6|1|K+3OL6|1|O+3OL6|1|L+3OL6|1|PPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.519
43OL9|1|J+3OL9|1|N+3OL9|1|K+3OL9|1|O+3OL9|1|L+3OL9|1|PPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2519
53OL8|1|J+3OL8|1|N+3OL8|1|K+3OL8|1|O+3OL8|1|L+3OL8|1|PPoliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7517
63OL7|1|J+3OL7|1|N+3OL7|1|K+3OL7|1|O+3OL7|1|L+3OL7|1|PPoliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.716
73OL7|1|B+3OL7|1|F+3OL7|1|C+3OL7|1|G+3OL7|1|D+3OL7|1|HPoliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.718
83OL8|1|B+3OL8|1|F+3OL8|1|C+3OL8|1|G+3OL8|1|D+3OL8|1|HPoliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7517
93OLA|1|F+3OLA|1|HPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5517
103OLA|1|B+3OLA|1|DPoliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5517
113OL9|1|B+3OL9|1|F+3OL9|1|C+3OL9|1|G+3OL9|1|D+3OL9|1|HPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2518
123OLB|1|B+3OLB|1|F+3OLB|1|C+3OLB|1|G+3OLB|1|D+3OLB|1|HPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4118
133OL6|1|B+3OL6|1|F+3OL6|1|C+3OL6|1|G+3OL6|1|D+3OL6|1|HPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.518
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