#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16T4Q|1|6 (rep)Transfer RNAICG tRNA Arg (P/P), mRNASaccharomyces cerevisiaeEukaryaRF00005Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.Electron microscopy2.62019-12-25
26SNT|1|6Transfer RNAtRNA, mRNASaccharomyces cerevisiaeEukaryaRF00005Yeast 80S ribosome stalled on SDD1 mRNA.Electron microscopy2.82020-03-04
36Q8Y|1|nTransfer RNAP-site tRNA, mRNASaccharomyces cerevisiaeEukaryaRF00005Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexElectron microscopy3.12019-03-13
47ZS5|1|2Transfer RNAtRNASaccharomyces cerevisiaeEukaryaRF00005Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNAElectron microscopy3.22023-02-22
57RR5|1|PTransfer RNAP-tRNA, mRNASaccharomyces cerevisiaeEukaryaRF00005Structure of ribosomal complex bound with Rbg1/Tma46Electron microscopy3.232021-11-10
66SV4|1|nTransfer RNAtRNA (P/P)Saccharomyces cerevisiaeEukaryaRF00005The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
76T7I|1|6Transfer RNAICG tRNA Arg, mRNASaccharomyces cerevisiaeEukaryaRF00005Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.Electron microscopy3.22019-12-25
87ZPQ|1|6Transfer RNAtRNASaccharomyces cerevisiaeEukaryaRF00005Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)Electron microscopy3.472023-02-22
97ZUW|1|6Transfer RNAtRNASaccharomyces cerevisiaeEukaryaRF00005Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiaeElectron microscopy4.32023-02-22
106I7O|1|nTransfer RNAP-site tRNASaccharomyces cerevisiaeEukaryaRF00005The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.Electron microscopy5.32019-01-16

Release history

Release3.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.337
Date2023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-29

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_60125.4NR_20.0_60125.33.271(7) 6SV4|1|n, 6SNT|1|6, 6Q8Y|1|n, 6I7O|1|n, 7RR5|1|P, 6T7I|1|6, 6T4Q|1|6(3) 7ZS5|1|2, 7ZPQ|1|6, 7ZUW|1|6(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17RR5|1|PStructure of ribosomal complex bound with Rbg1/Tma46ELECTRON MICROSCOPY3.2376
26SNT|1|6Yeast 80S ribosome stalled on SDD1 mRNA.ELECTRON MICROSCOPY2.875
36T7I|1|6Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.ELECTRON MICROSCOPY3.275
46T4Q|1|6Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.ELECTRON MICROSCOPY2.675
56Q8Y|1|nCryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexELECTRON MICROSCOPY3.176
66I7O|1|nThe structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.ELECTRON MICROSCOPY5.376
76SV4|1|nThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.376
87ZUW|1|6Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiaeELECTRON MICROSCOPY4.376
97ZPQ|1|6Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)ELECTRON MICROSCOPY3.4776
107ZS5|1|2Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNAELECTRON MICROSCOPY3.276
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