#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14QI2|1|E (rep)RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
24QI2|1|FRNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
34QI2|1|GRNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
44QI2|1|HRNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-ray diffraction32014-07-16
54QIK|1|C+ 4QIK|1|D5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3'Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplexX-ray diffraction1.92014-07-16

Release history

Release2.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.92
Date2015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_66070.2NR_all_66070.12.35(5) 4QI2|1|E, 4QI2|1|F, 4QI2|1|G, 4QI2|1|H, 4QIK|1|C+4QIK|1|D(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_66070.2NR_20.0_13250.12.93(1) 4QIK|1|C+4QIK|1|D(4) 4QI2|1|F, 4QI2|1|H, 4QI2|1|E, 4QI2|1|G(0)
NR_20.0_66070.2NR_20.0_19645.12.93(4) 4QI2|1|G, 4QI2|1|F, 4QI2|1|H, 4QI2|1|E(1) 4QIK|1|C+4QIK|1|D(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14QI2|1|EX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION319
24QI2|1|FX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION318
34QI2|1|HX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION320
44QI2|1|GX-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNAX-RAY DIFFRACTION319
54QIK|1|C+4QIK|1|DCrystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplexX-RAY DIFFRACTION1.918
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