#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17QI4|1|B (rep)mitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome at 2.2 A resolutionElectron microscopy2.212022-07-13
26ZM6|1|Bmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAElectron microscopy2.592021-01-13
37PO4|1|BtRNAValHomo sapiensAssembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)Electron microscopy2.562022-06-15
46ZM5|1|Bmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideElectron microscopy2.892021-01-13
57ODR|1|Bmitochondrial tRNAValHomo sapiensState A of the human mitoribosomal large subunit assembly intermediateElectron microscopy2.92021-06-23
68OIT|1|B9CP Val-tRNA(Val)Homo sapiens39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNAElectron microscopy2.92023-06-14
77OF0|1|Bmitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).Electron microscopy2.22021-06-09
87ODT|1|Bmitochondrial tRNAValHomo sapiensState C of the human mitoribosomal large subunit assembly intermediateElectron microscopy3.12021-06-23
97ODS|1|Bmitochondrial tRNAValHomo sapiensState B of the human mitoribosomal large subunit assembly intermediateElectron microscopy3.12021-06-23
107QI6|1|Bmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolutionElectron microscopy2.982023-05-17
117O9M|1|BMT-TRNAVALHomo sapiensHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleElectron microscopy2.52021-06-30
128OIR|1|B9CP Val-tRNA(Val)Homo sapiens55S human mitochondrial ribosome with mtRF1 and P-site tRNAElectron microscopy3.12023-06-14
137OF7|1|Bmitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).Electron microscopy2.52021-06-23
147OF6|1|BMitochondrial tRNAValHomo sapiensStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).Electron microscopy2.62021-06-09
157OF4|1|Bmitochondrial tRNAValHomo sapiensStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).Electron microscopy2.72021-06-09
167OF3|1|BMitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).Electron microscopy2.72021-05-19
177OF2|1|Bmitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.Electron microscopy2.72021-06-02
187O9K|1|BMT-TRNAVALHomo sapiensHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuElectron microscopy3.12021-06-30
197OF5|1|BMitochondrial tRNAValHomo sapiensStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).Electron microscopy2.92021-06-09
206VMI|1|BtRNAvalHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)Electron microscopy2.962020-08-05
216VLZ|1|BtRNAvalHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)Electron microscopy2.972020-08-05
227QH6|1|Bmitochondrial tRNAValHomo sapiensCryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1Electron microscopy3.082022-03-02
237A5J|1|Bmt-tRNAValHomo sapiensStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsElectron microscopy3.12020-12-23
247OIC|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4Electron microscopy3.12021-09-15
255OOL|1|Bmitochondrial tRNAValHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAElectron microscopy3.062017-09-13
265OOM|1|Bmitochondrial tRNAValHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAElectron microscopy3.032017-09-13
277L20|1|BtRNAvalHomo sapiensCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.Electron microscopy3.152021-05-12
287OIA|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CElectron microscopy3.22021-09-15
297OIB|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DElectron microscopy3.32021-09-15
307OI9|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BElectron microscopy3.32021-09-15
317A5H|1|Bmt-tRNAValHomo sapiensStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1Electron microscopy3.32020-12-23
326ZSC|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with E-site tRNAElectron microscopy3.52020-09-16
337L08|1|BtRNAVALHomo sapiensCryo-EM structure of the human 55S mitoribosome-RRFmt complex.Electron microscopy3.492021-05-12
347OI7|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2Electron microscopy3.52021-09-15
357OIE|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BElectron microscopy3.52021-09-15
367OI8|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AElectron microscopy3.52021-09-15
376ZSD|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAElectron microscopy3.72020-09-16
386I9R|1|BtRNA ValHomo sapiensLarge subunit of the human mitochondrial ribosome in complex with Virginiamycin M and QuinupristinElectron microscopy3.92020-07-08
397OID|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5AElectron microscopy3.72021-09-15
407A5I|1|B3mt-tRNAValHomo sapiensStructure of the human mitoribosome with A- P-and E-site mt-tRNAsElectron microscopy3.72020-12-23
417A5K|1|B3mt-tRNAValHomo sapiensStructure of the human mitoribosome in the post translocation state bound to mtEF-G1Electron microscopy3.72020-12-23
427OG4|1|XBmitochondrial tRNAValHomo sapiensHuman mitochondrial ribosome in complex with P/E-tRNAElectron microscopy3.82021-06-23
433J7Y|1|Bmt-tRNAValHomo sapiensStructure of the large ribosomal subunit from human mitochondriaElectron microscopy3.42014-10-15
446ZS9|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with ribosome recycling factorElectron microscopy42020-10-14
456ZSA|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAElectron microscopy42020-10-21
466ZSG|1|XBmt-tRNA ValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAElectron microscopy42020-10-14
473J9M|1|Bmt-tRNAValHomo sapiensStructure of the human mitochondrial ribosome (class 1)Electron microscopy3.52015-04-15
487A5G|1|B3mt-tRNAValHomo sapiensStructure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNAElectron microscopy4.332020-12-23
497A5F|1|B3mt-tRNA ValHomo sapiensStructure of the stalled human mitoribosome with P- and E-site mt-tRNAsElectron microscopy4.42020-12-23
506ZSB|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA and P-site tRNAElectron microscopy4.52020-09-16
516ZSE|1|XBmt-tRNAValHomo sapiensHuman mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNAElectron microscopy52020-09-16
527OI6|1|Bmitochondrial Val tRNAHomo sapiensCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1Electron microscopy5.72021-10-13

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17QH6|1|BCryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1ELECTRON MICROSCOPY3.0856
27A5I|1|B3Structure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.756
37A5G|1|B3Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNAELECTRON MICROSCOPY4.3356
47A5F|1|B3Structure of the stalled human mitoribosome with P- and E-site mt-tRNAsELECTRON MICROSCOPY4.456
57A5K|1|B3Structure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.756
63J7Y|1|BStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.457
73J9M|1|BStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.556
87OIC|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.156
97OI6|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1ELECTRON MICROSCOPY5.756
107A5H|1|BStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.356
117A5J|1|BStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.156
127OI8|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.556
137OID|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5AELECTRON MICROSCOPY3.756
147OIE|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.556
157OIB|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.356
167OI9|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.356
177OI7|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.556
187OIA|1|BCryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.256
195OOM|1|BStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.0356
205OOL|1|BStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.0656
217OF4|1|BStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.756
227OF6|1|BStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.656
237OF2|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.756
247OF5|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.956
257OF7|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.556
267OF0|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.256
277OF3|1|BStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.756
287L08|1|BCryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.4956
297L20|1|BCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.1556
307O9M|1|BHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.560
316VLZ|1|BStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.9756
326VMI|1|BStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.9656
336I9R|1|BLarge subunit of the human mitochondrial ribosome in complex with Virginiamycin M and QuinupristinELECTRON MICROSCOPY3.960
346ZSE|1|XBHuman mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNAELECTRON MICROSCOPY559
357OG4|1|XBHuman mitochondrial ribosome in complex with P/E-tRNAELECTRON MICROSCOPY3.859
366ZSC|1|XBHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.559
376ZSB|1|XBHuman mitochondrial ribosome in complex with mRNA and P-site tRNAELECTRON MICROSCOPY4.559
386ZS9|1|XBHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY459
396ZSD|1|XBHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.759
406ZSA|1|XBHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY459
416ZSG|1|XBHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY459
427PO4|1|BAssembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)ELECTRON MICROSCOPY2.5669
437ODR|1|BState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.972
446ZM5|1|BHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.8972
456ZM6|1|BHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.5972
467ODS|1|BState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.172
477ODT|1|BState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.172
488OIR|1|B955S human mitochondrial ribosome with mtRF1 and P-site tRNAELECTRON MICROSCOPY3.169
498OIT|1|B939S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNAELECTRON MICROSCOPY2.969
507QI4|1|BHuman mitochondrial ribosome at 2.2 A resolutionELECTRON MICROSCOPY2.2169
517QI6|1|BHuman mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolutionELECTRON MICROSCOPY2.9869
527O9K|1|BHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.160
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