Equivalence class NR_20.0_75392.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6ABF|1|V+ 6ABF|1|R (rep) | RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3'), RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3') | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1) | Electron microscopy | 3.7 | 2019-06-12 | ||||
| 2 | 6KUR|1|V+ 6KUR|1|R | 5'-vRNA, 3'-vRNA | synthetic construct | Synthetic | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1) | Electron microscopy | 3.7 | 2019-10-02 | ||
| 3 | 6KUK|1|V+ 6KUK|1|R | 5'-vRNA, 3'-vRNA | synthetic construct | Synthetic | Structure of influenza D virus polymerase bound to vRNA promoter in mode A conformation (class A1) | Electron microscopy | 3.9 | 2019-10-02 | ||
| 4 | 6ABB|1|V+ 6ABB|1|R | RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3'), RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3') | Structure of influenza D virus polymerase bound to vRNA promoter in mode A conformation (class A1) | Electron microscopy | 3.9 | 2019-06-12 | ||||
| 5 | 6ABG|1|V+ 6ABG|1|R | RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3'), RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3') | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3) | Electron microscopy | 4 | 2019-06-12 | ||||
| 6 | 6KUT|1|V+ 6KUT|1|R | 5'-vRNA, 3'-vRNA | synthetic construct | Synthetic | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2) | Electron microscopy | 4.1 | 2019-10-02 | ||
| 7 | 6ABD|1|V+ 6ABD|1|R | RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3'), RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3') | Structure of influenza D virus polymerase bound to vRNA promoter in Mode A conformation(Class A2) | Electron microscopy | 4.3 | 2019-06-12 | ||||
| 8 | 6KUP|1|V+ 6KUP|1|R | 5'-vRNA, 3'-vRNA | synthetic construct | Synthetic | Structure of influenza D virus polymerase bound to vRNA promoter in Mode A conformation(Class A2) | Electron microscopy | 4.3 | 2019-10-02 | ||
| 9 | 6ABE|1|V+ 6ABE|1|R | RNA (5'-R(P*AP*GP*CP*AP*GP*UP*AP*GP*CP*AP*AP*GP*GP*AP*G)-3'), RNA (5'-R(P*CP*UP*CP*CP*UP*GP*CP*UP*UP*AP*UP*GP*CP*U)-3') | structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2) | Electron microscopy | 4.1 | 2019-06-12 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_20.0_75392.1 | NR_20.0_82097.1 | 3.94 | (5) 6ABE|1|V+6ABE|1|R, 6ABD|1|V+6ABD|1|R, 6ABB|1|V+6ABB|1|R, 6ABG|1|V+6ABG|1|R, 6ABF|1|V+6ABF|1|R | (4) 6KUK|1|V+6KUK|1|R, 6KUT|1|V+6KUT|1|R, 6KUR|1|V+6KUR|1|R, 6KUP|1|V+6KUP|1|R | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_75392.1 | NR_20.0_89822.1 | 3.98 | (5) 6ABG|1|V+6ABG|1|R, 6ABE|1|V+6ABE|1|R, 6KUT|1|V+6KUT|1|R, 6KUR|1|V+6KUR|1|R, 6ABF|1|V+6ABF|1|R | (4) 6KUK|1|V+6KUK|1|R, 6KUP|1|V+6KUP|1|R, 6ABB|1|V+6ABB|1|R, 6ABD|1|V+6ABD|1|R | (0) |
| NR_20.0_75392.1 | NR_20.0_94483.1 | 3.98 | (4) 6ABD|1|V+6ABD|1|R, 6KUP|1|V+6KUP|1|R, 6ABB|1|V+6ABB|1|R, 6KUK|1|V+6KUK|1|R | (5) 6ABF|1|V+6ABF|1|R, 6ABE|1|V+6ABE|1|R, 6KUR|1|V+6KUR|1|R, 6ABG|1|V+6ABG|1|R, 6KUT|1|V+6KUT|1|R | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6ABG|1|V+6ABG|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3) | ELECTRON MICROSCOPY | 4 | 15 |
| 2 | 6ABF|1|V+6ABF|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1) | ELECTRON MICROSCOPY | 3.7 | 15 |
| 3 | 6KUR|1|V+6KUR|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1) | ELECTRON MICROSCOPY | 3.7 | 15 |
| 4 | 6KUT|1|V+6KUT|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2) | ELECTRON MICROSCOPY | 4.1 | 15 |
| 5 | 6ABE|1|V+6ABE|1|R | structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2) | ELECTRON MICROSCOPY | 4.1 | 15 |
| 6 | 6ABD|1|V+6ABD|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in Mode A conformation(Class A2) | ELECTRON MICROSCOPY | 4.3 | 15 |
| 7 | 6KUP|1|V+6KUP|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in Mode A conformation(Class A2) | ELECTRON MICROSCOPY | 4.3 | 15 |
| 8 | 6KUK|1|V+6KUK|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in mode A conformation (class A1) | ELECTRON MICROSCOPY | 3.9 | 15 |
| 9 | 6ABB|1|V+6ABB|1|R | Structure of influenza D virus polymerase bound to vRNA promoter in mode A conformation (class A1) | ELECTRON MICROSCOPY | 3.9 | 15 |