#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
17P6Z|1|4 (rep)5S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF00001Mycoplasma pneumoniae 70S ribosome in untreated cellsElectron microscopy3.52022-05-25
27OOD|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF00001Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cellsElectron microscopy3.42022-05-25
37PIB|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy4.72022-05-25
47PAL|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy4.72022-05-25
57PHB|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy4.92022-05-25
67PAK|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy5.32022-05-25
77PIT|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy5.72022-05-25
87PI9|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy6.32022-05-25
97PAI|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy6.72022-05-25
107PAM|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy6.82022-05-25
117PAO|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy72022-05-25
127PAJ|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.32022-05-25
137PAR|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.22022-05-25
147PHA|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.52022-05-25
157PAU|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF00001free 50S in complex with ribosome recycling factor in untreated Mycoplasma pneumoniae cellsElectron microscopy8.32022-05-25
167PH9|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.72022-05-25
177PI8|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy8.92022-05-25
187PAQ|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.92022-05-25
197PIC|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.12022-05-25
207PIP|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.32022-05-25
217PAH|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.52022-05-25
227PIO|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.52022-05-25
237PAT|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF00001free 50S in untreated Mycoplasma pneumoniae cellsElectron microscopy9.22022-05-25
247PIQ|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.72022-05-25
257PAN|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.72022-05-25
267PHC|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy9.92022-05-25
277PIR|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy12.12022-05-25
287PIA|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy13.62022-05-25
297PIS|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy152022-05-25
307PAS|1|45S ribosomal RNA5S ribosomal RNAMycoplasma pneumoniae M129BacteriaRF0000170S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy162022-05-25

Release history

Release3.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.281
Date2022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17PIC|1|470S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.1105
27PH9|1|470S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.7105
37PHA|1|470S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.5105
47PI8|1|470S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.9105
57PAT|1|4free 50S in untreated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.2105
67PAR|1|470S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.2105
77PAU|1|4free 50S in complex with ribosome recycling factor in untreated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.3105
87PAO|1|470S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7105
97PAJ|1|470S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.3105
107PI9|1|470S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.3105
117PAM|1|470S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.8105
127PAI|1|470S ribosome with P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.7105
137P6Z|1|4Mycoplasma pneumoniae 70S ribosome in untreated cellsELECTRON MICROSCOPY3.5105
147OOD|1|4Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cellsELECTRON MICROSCOPY3.4105
157PAL|1|470S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.7105
167PHB|1|470S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.9105
177PAK|1|470S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.3105
187PIT|1|470S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.7105
197PIB|1|470S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.7105
207PAQ|1|470S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.9105
217PAN|1|470S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.7105
227PIQ|1|470S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.7105
237PAH|1|470S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.5105
247PIP|1|470S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.3105
257PIO|1|470S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.5105
267PHC|1|470S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.9105
277PIR|1|470S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY12.1105
287PIA|1|470S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY13.6105
297PIS|1|470S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY15105
307PAS|1|470S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY16105
Copyright 2023 BGSU RNA group. Page generated in 0.0048 s