Equivalence class NR_20.0_84627.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7R81|1|A1+ 7R81|1|C1 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 26S rRNA, 5.8S rRNA | Neurospora crassa | Eukarya | RF02543 + RF00002 | Structure of the translating Neurospora crassa ribosome arrested by cycloheximide | Electron microscopy | 2.7 | 2021-12-01 |
| 2 | 7OLC|1|1+ 7OLC|1|4 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 26S rRNA, 5.8S rRNA | Chaetomium thermophilum var. thermophilum DSM 1495 | Eukarya | RF02543 + RF00002 | Thermophilic eukaryotic 80S ribosome at idle POST state | Electron microscopy | 2.9 | 2022-01-26 |
| 3 | 7OLD|1|1+ 7OLD|1|4 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 26S rRNA, 5.8S rRNA | Chaetomium thermophilum var. thermophilum DSM 1495 | Eukarya | RF02543 + RF00002 | Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state | Electron microscopy | 3 | 2022-01-26 |
| 4 | 7Z3N|1|1+ 7Z3N|1|4 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 26S rRNA, 5.8S rRNA | Thermochaetoides thermophila DSM 1495 | Eukarya | RF02543 + RF00002 | Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation | Electron microscopy | 3.2 | 2023-04-12 |
| 5 | 7Z3O|1|1+ 7Z3O|1|4 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 26S rRNA, 5.8S rRNA | Thermochaetoides thermophila DSM 1495 | Eukarya | RF02543 + RF00002 | Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation | Electron microscopy | 3.3 | 2023-04-12 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_20.0_84627.1 | NR_20.0_14483.1 | 3.278 | (3) 7R81|1|A1+7R81|1|C1, 7OLD|1|1+7OLD|1|4, 7OLC|1|1+7OLC|1|4 | (2) 7Z3O|1|1+7Z3O|1|4, 7Z3N|1|1+7Z3N|1|4 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_84627.1 | NR_20.0_93493.1 | 3.283 | (5) 7OLC|1|1+7OLC|1|4, 7R81|1|A1+7R81|1|C1, 7Z3O|1|1+7Z3O|1|4, 7Z3N|1|1+7Z3N|1|4, 7OLD|1|1+7OLD|1|4 | (0) | (9) 8I9X|1|C1+8I9X|1|C2, 8I9V|1|C1+8I9V|1|C2, 8I9R|1|C1+8I9R|1|C2, 8I9W|1|C1+8I9W|1|C2, 8I9T|1|C1+8I9T|1|C2, 8I9P|1|C1+8I9P|1|C2, 8IA0|1|C1+8IA0|1|C2, 8I9Z|1|C1+8I9Z|1|C2, 8I9Y|1|C1+8I9Y|1|C2 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7OLD|1|1+7OLD|1|4 | Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state | ELECTRON MICROSCOPY | 3 | 3192 |
| 2 | 7OLC|1|1+7OLC|1|4 | Thermophilic eukaryotic 80S ribosome at idle POST state | ELECTRON MICROSCOPY | 2.9 | 3190 |
| 3 | 7Z3O|1|1+7Z3O|1|4 | Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation | ELECTRON MICROSCOPY | 3.3 | 3190 |
| 4 | 7Z3N|1|1+7Z3N|1|4 | Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation | ELECTRON MICROSCOPY | 3.2 | 3190 |
| 5 | 7R81|1|A1+7R81|1|C1 | Structure of the translating Neurospora crassa ribosome arrested by cycloheximide | ELECTRON MICROSCOPY | 2.7 | 3123 |
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