#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14WF9|1|X (rep)Large subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-ray diffraction3.432015-10-21
25HL7|1|XLarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulinX-ray diffraction3.552016-12-21
34WFA|1|XLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-ray diffraction3.392015-10-21
45HKV|1|XLarge subunit ribosomal RNA23s ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycinX-ray diffraction3.662017-05-03
54WCE|1|XLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureusX-ray diffraction3.532015-10-21
64WFB|1|XLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-ray diffraction3.432015-10-21
75NRG|1|XLarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-ray diffraction3.442017-08-09
86S0Z|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.Electron microscopy2.32019-08-21
97ASM|1|ALarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Staphylococcus aureus 50S after 30 minutes incubation at 37CElectron microscopy2.482021-11-17
106HMA|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunitElectron microscopy2.652018-11-14
116S0X|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.Electron microscopy2.422019-08-21
125NGM|1|AALarge subunit ribosomal RNA23S Ribosomal RNAStaphylococcus aureusBacteriaRF025412.9S structure of the 70S ribosome composing the S. aureus 100S complexElectron microscopy2.92017-10-04
137NHL|1|ALarge subunit ribosomal RNA23S rRNAStaphylococcus aureus subsp. aureus NCTC 8325BacteriaRF02541VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureusElectron microscopy3.12021-05-05
147ASP|1|YLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Staphylococcus aureus 70S after 50 minutes incubation at 37CElectron microscopy2.862021-11-17
157NHM|1|ALarge subunit ribosomal RNA23S rRNAStaphylococcus aureus subsp. aureus NCTC 8325BacteriaRF0254170S ribosome from Staphylococcus aureusElectron microscopy3.12021-05-05
167P48|1|ALarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Staphylococcus aureus ribosome in complex with Sal(B)Electron microscopy2.92022-02-02
177ASN|1|ALarge subunit ribosomal RNA23SStaphylococcus aureusBacteriaRF02541Staphylococcus aureus 50S after 30 minutes incubation a 37CElectron microscopy2.732021-11-17
186YEF|1|ALarge subunit ribosomal RNA23S rRNAStaphylococcus aureus subsp. aureus NCTC 8325BacteriaRF0254170S initiation complex with assigned rRNA modifications from Staphylococcus aureusElectron microscopy3.22021-01-27
197TTW|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF0254150S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistanceElectron microscopy2.92022-07-06
206WQN|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolidElectron microscopy2.92020-06-03
217ASO|1|YLarge subunit ribosomal RNA23SStaphylococcus aureusBacteriaRF02541Staphylococcus aureus 70S after 30 minutes incubation at 37CElectron microscopy3.112021-11-17
227TTU|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF0254150S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)Electron microscopy32022-07-06
236WQQ|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolidElectron microscopy3.12020-06-03
246WRU|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolidElectron microscopy3.12020-06-03
256WRS|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolidElectron microscopy3.22020-06-03
266DDG|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-6Electron microscopy3.12019-03-20
276DDD|1|1Large subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5Electron microscopy3.12019-03-20
286S12|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).Electron microscopy3.22019-08-21
296SJ6|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureusElectron microscopy3.232020-04-08
305T7V|1|BLarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)Electron microscopy3.62017-05-31
315ND8|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Hibernating ribosome from Staphylococcus aureus (Unrotated state)Electron microscopy3.72017-06-28
325ND9|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Hibernating ribosome from Staphylococcus aureus (Rotated state)Electron microscopy3.72017-06-28
335LI0|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF0254170S ribosome from Staphylococcus aureusElectron microscopy3.82016-12-28
345TCU|1|BLarge subunit ribosomal RNA23S RRNAStaphylococcus aureusBacteriaRF02541Methicillin sensitive Staphylococcus aureus 70S ribosomeElectron microscopy3.92017-05-24
356S13|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).Electron microscopy3.582019-08-21
366FXC|1|BALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusElectron microscopy6.762018-03-21
376FXC|1|AALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusElectron microscopy6.762018-03-21

Release history

Release3.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17ASN|1|AStaphylococcus aureus 50S after 30 minutes incubation a 37CELECTRON MICROSCOPY2.732739
26SJ6|1|ACryo-EM structure of 50S-RsfS complex from Staphylococcus aureusELECTRON MICROSCOPY3.232585
36HMA|1|AImproved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunitELECTRON MICROSCOPY2.652831
47ASM|1|AStaphylococcus aureus 50S after 30 minutes incubation at 37CELECTRON MICROSCOPY2.482831
56FXC|1|BAThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusELECTRON MICROSCOPY6.762905
66FXC|1|AAThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusELECTRON MICROSCOPY6.762905
75NGM|1|AA2.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.92905
85HL7|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulinX-RAY DIFFRACTION3.552705
94WCE|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureusX-RAY DIFFRACTION3.532708
105HKV|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycinX-RAY DIFFRACTION3.662695
114WFA|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-RAY DIFFRACTION3.392711
124WF9|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-RAY DIFFRACTION3.432712
134WFB|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-RAY DIFFRACTION3.432707
145NRG|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-RAY DIFFRACTION3.442711
156DDG|1|1Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-6ELECTRON MICROSCOPY3.12646
166DDD|1|1Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5ELECTRON MICROSCOPY3.12646
175ND9|1|AHibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.72914
185ND8|1|AHibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.72912
195LI0|1|A70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.82914
207NHM|1|A70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.12824
217NHL|1|AVgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.12914
227P48|1|AStaphylococcus aureus ribosome in complex with Sal(B)ELECTRON MICROSCOPY2.92661
236YEF|1|A70S initiation complex with assigned rRNA modifications from Staphylococcus aureusELECTRON MICROSCOPY3.22875
245TCU|1|BMethicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.92755
255T7V|1|BMethicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.62768
266WRU|1|1Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolidELECTRON MICROSCOPY3.12665
276WQQ|1|1Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolidELECTRON MICROSCOPY3.12698
286WRS|1|1Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolidELECTRON MICROSCOPY3.22698
297TTW|1|150S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistanceELECTRON MICROSCOPY2.92690
307TTU|1|150S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)ELECTRON MICROSCOPY32684
316WQN|1|1Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolidELECTRON MICROSCOPY2.92687
327ASO|1|YStaphylococcus aureus 70S after 30 minutes incubation at 37CELECTRON MICROSCOPY3.112720
336S0X|1|AErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.422905
346S0Z|1|AErythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.ELECTRON MICROSCOPY2.32905
356S12|1|AErythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).ELECTRON MICROSCOPY3.22905
366S13|1|AErythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).ELECTRON MICROSCOPY3.582905
377ASP|1|YStaphylococcus aureus 70S after 50 minutes incubation at 37CELECTRON MICROSCOPY2.862723
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