Equivalence class NR_20.0_99632.9 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6FYY|1|1 (rep) | Transfer RNA | tRNAi, mRNA (31-MER) | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | Electron microscopy | 3.02 | 2018-12-05 |
| 2 | 8CAS|1|1 | tRNA, mRNA | Saccharomyces cerevisiae W303 | Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial) | Electron microscopy | 3.3 | 2023-05-24 | |||
| 3 | 6FYX|1|1 | Transfer RNA | tRNAi, mRNA (31-MER) | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | Electron microscopy | 3.5 | 2018-12-05 |
| 4 | 3J81|1|1 | Transfer RNA | Met-tRNAi, mRNA | RF00005 | CryoEM structure of a partial yeast 48S preinitiation complex | Electron microscopy | 4 | 2014-11-05 | ||
| 5 | 6GSM|1|1 | Transfer RNA | Met-tRNAi, mRNA (5'-R(P*AP*AP*U)-3') | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex in open conformation | Electron microscopy | 5.15 | 2019-07-31 |
| 6 | 6GSN|1|1 | Transfer RNA | tRNAi (75-MER), mRNA | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex in closed conformation | Electron microscopy | 5.75 | 2019-06-26 |
| 7 | 6ZU9|1|1 | Transfer RNA | tRNA, mRNA | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a yeast ABCE1-bound 48S initiation complex | Electron microscopy | 6.2 | 2020-10-28 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6GSM|1|1 | Structure of a partial yeast 48S preinitiation complex in open conformation | ELECTRON MICROSCOPY | 5.15 | 64 |
| 2 | 8CAS|1|1 | Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial) | ELECTRON MICROSCOPY | 3.3 | 64 |
| 3 | 6FYX|1|1 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | ELECTRON MICROSCOPY | 3.5 | 64 |
| 4 | 6ZU9|1|1 | Structure of a yeast ABCE1-bound 48S initiation complex | ELECTRON MICROSCOPY | 6.2 | 64 |
| 5 | 6FYY|1|1 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | ELECTRON MICROSCOPY | 3.02 | 64 |
| 6 | 6GSN|1|1 | Structure of a partial yeast 48S preinitiation complex in closed conformation | ELECTRON MICROSCOPY | 5.75 | 75 |
| 7 | 3J81|1|1 | CryoEM structure of a partial yeast 48S preinitiation complex | ELECTRON MICROSCOPY | 4 | 74 |