Equivalence class NR_20.0_99632.9 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6FYY|1|1 (rep) | Transfer RNA | tRNAi, mRNA (31-MER) | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | Electron microscopy | 3.02 | 2018-12-05 |
| 2 | 8CAS|1|1 | Transfer RNA | tRNA, mRNA | Saccharomyces cerevisiae W303 | Eukarya | RF00005 | Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial) | Electron microscopy | 3.3 | 2023-05-24 |
| 3 | 6FYX|1|1 | Transfer RNA | tRNAi, mRNA (31-MER) | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | Electron microscopy | 3.5 | 2018-12-05 |
| 4 | 3J81|1|1 | Met-tRNAi, mRNA | CryoEM structure of a partial yeast 48S preinitiation complex | Electron microscopy | 4 | 2014-11-05 | ||||
| 5 | 6GSM|1|1 | Transfer RNA | Met-tRNAi, mRNA (5'-R(P*AP*AP*U)-3') | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex in open conformation | Electron microscopy | 5.15 | 2019-07-31 |
| 6 | 6GSN|1|1 | Transfer RNA | tRNAi (75-MER), mRNA | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a partial yeast 48S preinitiation complex in closed conformation | Electron microscopy | 5.75 | 2019-06-26 |
| 7 | 6ZU9|1|1 | Transfer RNA | tRNA, mRNA | Saccharomyces cerevisiae | Eukarya | RF00005 | Structure of a yeast ABCE1-bound 48S initiation complex | Electron microscopy | 6.2 | 2020-10-28 |
Release history
| Release | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6GSM|1|1 | Structure of a partial yeast 48S preinitiation complex in open conformation | ELECTRON MICROSCOPY | 5.15 | 64 |
| 2 | 8CAS|1|1 | Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial) | ELECTRON MICROSCOPY | 3.3 | 64 |
| 3 | 6FYX|1|1 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | ELECTRON MICROSCOPY | 3.5 | 64 |
| 4 | 6ZU9|1|1 | Structure of a yeast ABCE1-bound 48S initiation complex | ELECTRON MICROSCOPY | 6.2 | 64 |
| 5 | 6FYY|1|1 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | ELECTRON MICROSCOPY | 3.02 | 64 |
| 6 | 6GSN|1|1 | Structure of a partial yeast 48S preinitiation complex in closed conformation | ELECTRON MICROSCOPY | 5.75 | 75 |
| 7 | 3J81|1|1 | CryoEM structure of a partial yeast 48S preinitiation complex | ELECTRON MICROSCOPY | 4 | 74 |