NR_3.0_10157.81

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5J7L\|1\|DB (rep)	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
2	4YBB\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
3	6I7V\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2018-12-05
4	4WOI\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
5	5J91\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
6	4U27\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
7	4WOI\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
8	4V9D\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
9	4V9P\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
10	4V9P\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
11	4U24\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
12	4V9O\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
13	4U26\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
14	4V9P\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
15	4V9O\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
16	4U25\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
17	4V9O\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
18	4V9P\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
19	4U1U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
20	4U20\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
21	4U1V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
22	5J7L\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-ray diffraction	3	2016-07-27
23	4V9D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
24	6I7V\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Ribosomal protein paralogs bL31 and bL36	X-ray diffraction	2.9	2018-12-05
25	4V9O\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
26	4U27\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
27	4U25\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
28	4U1V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
29	4YBB\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
30	4U26\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
31	4U1U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
32	4U20\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
33	4U24\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
34	5J91\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
35	5J5B\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
36	5J5B\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the WT E coli ribosome bound to tetracycline	X-ray diffraction	2.8	2016-07-27
37	7K00\|1\|b	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	2020-09-23
38	6XZ7\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	2020-07-22
39	6PJ6\|1\|J	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High resolution cryo-EM structure of E.coli 50S	Electron microscopy	2.2	2020-01-22
40	7N1P\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	Electron microscopy	2.33	2021-07-14
41	7O1A\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.4	2021-09-01
42	7BL4\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli K-12	Bacteria	RF00001	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	Electron microscopy	2.4	2021-05-12
43	7N2U\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	Electron microscopy	2.53	2021-07-14
44	7N2V\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	Electron microscopy	2.54	2021-07-14
45	6XZB\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	2020-11-04
46	6YSS\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	Electron microscopy	2.6	2020-08-19
47	6PC6\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 47	Electron microscopy	2.5	2020-06-17
48	6PCR\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40o	Electron microscopy	2.5	2020-06-17
49	6PC7\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 46	Electron microscopy	2.5	2020-06-17
50	6YS3\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.58	2020-09-30
51	7O1C\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	Electron microscopy	2.6	2021-09-01
52	7N30\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	Electron microscopy	2.66	2021-07-14
53	7N31\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a post-translocation (POST) conformation	Electron microscopy	2.69	2021-07-14
54	6TBV\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	Electron microscopy	2.7	2020-01-01
55	6TC3\|1\|05S1	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	Electron microscopy	2.7	2020-01-01
56	6XZA\|1\|B2	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	2020-11-04
57	7N2C\|1\|5	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	Electron microscopy	2.72	2021-07-14
58	6PCQ\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to VM2	Electron microscopy	2.6	2020-06-17
59	6PC5\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 46 and VS1	Electron microscopy	2.7	2020-06-17
60	6QDW\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	Electron microscopy	2.83	2020-01-15
61	7NSO\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	Electron microscopy	2.9	2021-07-14
62	5AFI\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
63	7B5K\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli K-12	Bacteria	RF00001	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	Electron microscopy	2.9	2021-05-26
64	6Y69\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	2020-07-01
65	7O19\|1\|BB	5S ribosomal RNA	Ribosomal RNA 5S	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	Electron microscopy	2.9	2021-09-01
66	6ORE\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Release complex 70S	Electron microscopy	2.9	2019-06-19
67	7OIZ\|1\|b	Small subunit ribosomal RNA fragment	16S rRNA	Escherichia coli K-12	Bacteria	RF00001	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	Electron microscopy	2.9	2021-09-15
68	6PCT\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 41q	Electron microscopy	2.8	2020-06-17
69	6WYV\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compounds 47 and VS1	Electron microscopy	2.75	2020-06-17
70	6U48\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	Electron microscopy	2.87	2019-09-18
71	5NWY\|1\|O	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	Electron microscopy	2.9	2017-07-19
72	5MDV\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
73	6ZTP\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	2020-09-16
74	6ZU1\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	2020-09-16
75	6ZTO\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	2020-09-23
76	6WDE\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	2020-07-01
77	6PCS\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40e	Electron microscopy	2.8	2020-06-17
78	6WD0\|1\|2	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	2020-07-01
79	6HRM\|1\|3	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 70S d2d8 stapled ribosome	Electron microscopy	2.96	2018-12-19
80	6PC8\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 40q	Electron microscopy	2.9	2020-06-17
81	6H4N\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	2018-09-05
82	6QUL\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	Electron microscopy	3	2019-04-10
83	6PCH\|1\|J	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	E. coli 50S ribosome bound to compound 21	Electron microscopy	2.9	2020-06-17
84	5WFS\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	2018-05-02
85	5WDT\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2018-04-25
86	5IQR\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04

Release history

Release	3.196	3.197	3.198	3.199	3.200
Date	2021-09-15	2021-09-22	2021-09-29	2021-10-06	2021-10-13

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_10157.81	NR_3.0_10157.80	3.196	(85) 4V9O\|1\|EB, 6PCQ\|1\|J, 7O19\|1\|BB, 4V9O\|1\|CB, 6PCH\|1\|J, 7NSO\|1\|B, 4V9O\|1\|AB, 6PC8\|1\|J, 7N31\|1\|5, 4V9D\|1\|DB, 6PC7\|1\|J, 7N30\|1\|5, 6PC6\|1\|J, 7N2V\|1\|5, 4V9D\|1\|CB, 6PC5\|1\|J, 7N2U\|1\|5, 4U27\|1\|DB, 6ORE\|1\|3, 7N2C\|1\|5, 4U27\|1\|BB, 6I7V\|1\|DB, 7N1P\|1\|5, 4U26\|1\|DB, 6I7V\|1\|CB, 7K00\|1\|b, 4U26\|1\|BB, 6HRM\|1\|3, 7BL4\|1\|B, 4U25\|1\|DB, 6H4N\|1\|B, 7B5K\|1\|B, 4U25\|1\|BB, 5WFS\|1\|B, 6ZU1\|1\|BB, 4U24\|1\|DB, 5WDT\|1\|B, 6ZTP\|1\|BB, 4U24\|1\|BB, 5NWY\|1\|O, 6ZTO\|1\|BB, 4U20\|1\|DB, 5MDV\|1\|3, 6YSS\|1\|B, 4U20\|1\|BB, 5J91\|1\|DB, 6YS3\|1\|a, 4U1V\|1\|DB, 5J91\|1\|CB, 6Y69\|1\|B, 4U1V\|1\|BB, 5J7L\|1\|DB, 6XZB\|1\|B2, 4U1U\|1\|DB, 5J7L\|1\|CB, 6XZA\|1\|B2, 4U1U\|1\|BB, 5J5B\|1\|DB, 6XZ7\|1\|B, 5J5B\|1\|CB, 6WYV\|1\|J, 5IQR\|1\|3, 6WDE\|1\|2, 5AFI\|1\|B, 6WD0\|1\|2, 4YBB\|1\|DB, 6U48\|1\|CB, 4YBB\|1\|CB, 6TC3\|1\|05S1, 4WOI\|1\|CB, 6TBV\|1\|05S1, 4WOI\|1\|BB, 6QUL\|1\|B, 4V9P\|1\|GB, 6QDW\|1\|a, 4V9P\|1\|EB, 6PJ6\|1\|J, 4V9P\|1\|CB, 6PCT\|1\|J, 4V9P\|1\|AB, 6PCS\|1\|J, 7O1C\|1\|BB, 4V9O\|1\|GB, 6PCR\|1\|J, 7O1A\|1\|BB	(1) 7OIZ\|1\|b	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_10157.81	NR_3.0_10157.82	3.201	(86) 6ZTP\|1\|BB, 4U24\|1\|BB, 4V9P\|1\|EB, 5WDT\|1\|B, 6PJ6\|1\|J, 6ZTO\|1\|BB, 7OIZ\|1\|b, 4U20\|1\|DB, 4V9P\|1\|CB, 5NWY\|1\|O, 6PCT\|1\|J, 6YSS\|1\|B, 7O1C\|1\|BB, 4U20\|1\|BB, 4V9P\|1\|AB, 5MDV\|1\|3, 6PCS\|1\|J, 6YS3\|1\|a, 7O1A\|1\|BB, 4U1V\|1\|DB, 4V9O\|1\|GB, 5J91\|1\|DB, 6PCR\|1\|J, 6Y69\|1\|B, 7O19\|1\|BB, 4U1V\|1\|BB, 4V9O\|1\|EB, 5J91\|1\|CB, 6PCQ\|1\|J, 6XZB\|1\|B2, 7NSO\|1\|B, 4U1U\|1\|DB, 4V9O\|1\|CB, 5J7L\|1\|DB, 6PCH\|1\|J, 6XZA\|1\|B2, 7N31\|1\|5, 4U1U\|1\|BB, 4V9O\|1\|AB, 5J7L\|1\|CB, 6PC8\|1\|J, 6XZ7\|1\|B, 7N30\|1\|5, 4V9D\|1\|DB, 5J5B\|1\|DB, 6PC7\|1\|J, 6WYV\|1\|J, 7N2V\|1\|5, 4V9D\|1\|CB, 5J5B\|1\|CB, 6PC6\|1\|J, 6WDE\|1\|2, 7N2U\|1\|5, 4U27\|1\|DB, 5IQR\|1\|3, 6PC5\|1\|J, 6WD0\|1\|2, 7N2C\|1\|5, 4U27\|1\|BB, 5AFI\|1\|B, 6ORE\|1\|3, 6U48\|1\|CB, 7N1P\|1\|5, 4U26\|1\|DB, 4YBB\|1\|DB, 6I7V\|1\|DB, 6TC3\|1\|05S1, 7K00\|1\|b, 4U26\|1\|BB, 4YBB\|1\|CB, 6I7V\|1\|CB, 7BL4\|1\|B, 4U25\|1\|DB, 4WOI\|1\|CB, 6HRM\|1\|3, 6TBV\|1\|05S1, 7B5K\|1\|B, 4U25\|1\|BB, 4WOI\|1\|BB, 6H4N\|1\|B, 6QUL\|1\|B, 6ZU1\|1\|BB, 4U24\|1\|DB, 4V9P\|1\|GB, 5WFS\|1\|B, 6QDW\|1\|a	(0)	(1) 7PJS\|1\|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	6YSS\|1\|B	Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state	ELECTRON MICROSCOPY	2.6	120
2	6H4N\|1\|B	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	120
3	6Y69\|1\|B	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	120
4	5WFS\|1\|B	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	120
5	5AFI\|1\|B	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	120
6	6WD0\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	120
7	6WDE\|1\|2	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	120
8	5WDT\|1\|B	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	120
9	7NSO\|1\|B	Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA	ELECTRON MICROSCOPY	2.9	120
10	7K00\|1\|b	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	119
11	7N2C\|1\|5	Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)	ELECTRON MICROSCOPY	2.72	120
12	7N2V\|1\|5	Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)	ELECTRON MICROSCOPY	2.54	120
13	7N2U\|1\|5	Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation	ELECTRON MICROSCOPY	2.53	120
14	7N31\|1\|5	Elongating 70S ribosome complex in a post-translocation (POST) conformation	ELECTRON MICROSCOPY	2.69	120
15	7N1P\|1\|5	Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation	ELECTRON MICROSCOPY	2.33	120
16	7N30\|1\|5	Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation	ELECTRON MICROSCOPY	2.66	120
17	6QUL\|1\|B	Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid	ELECTRON MICROSCOPY	3	120
18	6XZB\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	120
19	6XZ7\|1\|B	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	120
20	6XZA\|1\|B2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	120
21	6ZU1\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	120
22	6ZTP\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	120
23	6ZTO\|1\|BB	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	120
24	7OIZ\|1\|b	Cryo-EM structure of 70S ribosome stalled with TnaC peptide	ELECTRON MICROSCOPY	2.9	119
25	6TBV\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)	ELECTRON MICROSCOPY	2.7	120
26	6TC3\|1\|05S1	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)	ELECTRON MICROSCOPY	2.7	120
27	7O1A\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.4	120
28	7O19\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.9	120
29	7O1C\|1\|BB	Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan	ELECTRON MICROSCOPY	2.6	120
30	7B5K\|1\|B	E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.	ELECTRON MICROSCOPY	2.9	120
31	6HRM\|1\|3	E. coli 70S d2d8 stapled ribosome	ELECTRON MICROSCOPY	2.96	120
32	6U48\|1\|CB	E. coli 50S with phazolicin (PHZ) bound in exit tunnel	ELECTRON MICROSCOPY	2.87	118
33	7BL4\|1\|B	in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle	ELECTRON MICROSCOPY	2.4	119
34	6WYV\|1\|J	E. coli 50S ribosome bound to compounds 47 and VS1	ELECTRON MICROSCOPY	2.75	118
35	6PCH\|1\|J	E. coli 50S ribosome bound to compound 21	ELECTRON MICROSCOPY	2.9	118
36	6PCT\|1\|J	E. coli 50S ribosome bound to compound 41q	ELECTRON MICROSCOPY	2.8	118
37	6PC7\|1\|J	E. coli 50S ribosome bound to compound 46	ELECTRON MICROSCOPY	2.5	118
38	6PCQ\|1\|J	E. coli 50S ribosome bound to VM2	ELECTRON MICROSCOPY	2.6	118
39	6PCS\|1\|J	E. coli 50S ribosome bound to compound 40e	ELECTRON MICROSCOPY	2.8	118
40	6PC6\|1\|J	E. coli 50S ribosome bound to compound 47	ELECTRON MICROSCOPY	2.5	118
41	6PCR\|1\|J	E. coli 50S ribosome bound to compound 40o	ELECTRON MICROSCOPY	2.5	118
42	6PC5\|1\|J	E. coli 50S ribosome bound to compounds 46 and VS1	ELECTRON MICROSCOPY	2.7	118
43	6PC8\|1\|J	E. coli 50S ribosome bound to compound 40q	ELECTRON MICROSCOPY	2.9	118
44	5NWY\|1\|O	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex	ELECTRON MICROSCOPY	2.9	118
45	6ORE\|1\|3	Release complex 70S	ELECTRON MICROSCOPY	2.9	120
46	5MDV\|1\|3	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	120
47	5IQR\|1\|3	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	118
48	6PJ6\|1\|J	High resolution cryo-EM structure of E.coli 50S	ELECTRON MICROSCOPY	2.2	118
49	6I7V\|1\|DB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	119
50	4YBB\|1\|DB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	120
51	5J5B\|1\|DB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	120
52	5J91\|1\|DB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	120
53	5J7L\|1\|DB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	120
54	4U26\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	119
55	4U24\|1\|BB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	119
56	4U25\|1\|BB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	119
57	4U27\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	119
58	4U1V\|1\|BB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	119
59	4U1U\|1\|BB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	119
60	4U20\|1\|BB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	119
61	4V9D\|1\|CB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	119
62	4WOI\|1\|BB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	119
63	4V9O\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
64	4V9O\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
65	4V9P\|1\|CB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
66	4V9P\|1\|AB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
67	5J91\|1\|CB	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	118
68	5J5B\|1\|CB	Structure of the WT E coli ribosome bound to tetracycline	X-RAY DIFFRACTION	2.8	118
69	5J7L\|1\|CB	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline	X-RAY DIFFRACTION	3	118
70	4YBB\|1\|CB	High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	118
71	4V9O\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
72	4V9P\|1\|EB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
73	4V9D\|1\|DB	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	118
74	4U1U\|1\|DB	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	118
75	4U20\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	118
76	4U1V\|1\|DB	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	118
77	4U27\|1\|DB	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	118
78	4U25\|1\|DB	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	118
79	4U24\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	118
80	4U26\|1\|DB	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	118
81	6I7V\|1\|CB	Ribosomal protein paralogs bL31 and bL36	X-RAY DIFFRACTION	2.9	118
82	4WOI\|1\|CB	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	118
83	4V9P\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
84	4V9O\|1\|GB	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
85	6QDW\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.83	118
86	6YS3\|1\|a	Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide	ELECTRON MICROSCOPY	2.58	118

Equivalence class NR_3.0_10157.81 Obsolete

Release history

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