#IFECompound(s)RNA source organismTitleMethodResolutionDate
15FDV|1|1B (rep)5S ribosomal RNAThermus thermophilusCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-01-27
25FDU|1|1B5S ribosomal RNAThermus thermophilusCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92016-01-27
34Y4O|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32015-03-18
44Y4O|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32015-03-18
55IBB|1|165S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.962016-05-25
65HCQ|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
74WPO|1|AB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
85E81|1|165S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952016-01-27
96CFL|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-RAY DIFFRACTION2.62018-03-07
106CAE|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62018-04-18
115FDV|1|2B5S ribosomal RNAThermus thermophilusCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-01-27
125IB7|1|165S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.992016-05-25
134V8I|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.72014-07-09
145FDU|1|2B5S ribosomal RNAThermus thermophilusCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92016-01-27
155IBB|1|1J5S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.962016-05-25
165W4K|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.72017-08-30
175E81|1|1J5S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952016-01-27
186CFK|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-RAY DIFFRACTION2.72018-03-07
194WQU|1|AB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
205NDK|1|165S ribosomal RNAThermus thermophilusCrystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.952017-12-13
214WSD|1|165S ribosomal RNAThermus thermophilusComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
225HCR|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
235NDK|1|1J5S ribosomal RNAThermus thermophilusCrystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.952017-12-13
245J4B|1|1B5S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62016-04-27
254LNT|1|YB5S rRNAThermus thermophilusCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
266CFJ|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82018-03-07
274WQF|1|AB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
285IB7|1|1J5S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.992016-05-25
294V8D|1|BB5S RIBOSOMAL RNAThermus thermophilusStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
304V8G|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
314W2G|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
325J4C|1|1B5S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82016-04-27
334Z8C|1|1B5S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
345J4B|1|2B5S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62016-04-27
356CFL|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-RAY DIFFRACTION2.62018-03-07
364V9R|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
375HD1|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.72016-04-06
385HCP|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.892016-04-06
394V9H|1|BB5S ribosomal RNAThermus thermophilusCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.862014-07-09
404W2I|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
414V8D|1|DB5S RIBOSOMAL RNAThermus thermophilusStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
425WIS|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.72018-02-14
434Z3S|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
444WQY|1|AB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
456CAE|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62018-04-18
464Z8C|1|2B5S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
474LNT|1|RB5S rRNAThermus thermophilusCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
481VY4|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
495HAU|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION32016-04-06
504WPO|1|CB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
514V8B|1|BB5S RIBOSOMAL RNAThermus thermophilusCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
525J8B|1|B5S Ribosomal RNAThermus thermophilusCrystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.62016-05-25
534W2H|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
544WSD|1|1J5S ribosomal RNAThermus thermophilusComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
556CFK|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-RAY DIFFRACTION2.72018-03-07
565J4C|1|2B5S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82016-04-27
575HAU|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION32016-04-06
585HCQ|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
591VY7|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
604W2F|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
615WIT|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62018-02-14
626CFJ|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82018-03-07
635W4K|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.72017-08-30
641VY5|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
654W2I|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
664Y4P|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
675DOY|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.62015-12-30
684V8G|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
694W2G|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
704WQF|1|CB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
715HCR|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
724Z3S|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
734V9R|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
745HD1|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.72016-04-06
756ND6|1|1B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.852019-02-20
764W2F|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
771VY6|1|BB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
785WIS|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.72018-02-14
794WQU|1|CB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
801VY4|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
814WQY|1|CB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
824V8B|1|DB5S RIBOSOMAL RNAThermus thermophilusCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
835F8K|1|1B5S ribosomal RNAThermus thermophilusCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-02-03
845DOY|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.62015-12-30
854V90|1|BB5S RIBOSOMAL RNAThermus thermophilusThermus thermophilus RibosomeX-RAY DIFFRACTION2.952014-07-09
865HCP|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.892016-04-06
874Y4P|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
884W2H|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
894V51|1|BB5S RIBOSOMAL RNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
901VY5|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
914W2E|1|B5S Ribosomal RNAThermus thermophilusCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92014-10-01
926ND6|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.852019-02-20
934V51|1|DB5S RIBOSOMAL RNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
945WIT|1|2B5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62018-02-14
954V8I|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.72014-07-09
964V7L|1|BB5S ribosomal RNAThermus thermophilusThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
971VY6|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
981VY7|1|DB5S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
994V7L|1|DB5S ribosomal RNAThermus thermophilusThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1005F8K|1|2B5S ribosomal RNAThermus thermophilusCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-02-03
1014V7Y|1|BB5S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION32014-07-09
1024V67|1|BB5S RRNAThermus thermophilusCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
1034V7X|1|BB5S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION32014-07-09
1044V7W|1|BB5S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION32014-07-09
1054V7Y|1|DB5S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION32014-07-09
1064V67|1|DB5S RRNAThermus thermophilusCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
1074V7W|1|DB5S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION32014-07-09
1084V7X|1|DB5S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION32014-07-09
1096GSJ|1|165S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.962018-07-04
1106GSJ|1|1J5S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.962018-07-04

Release history

Release3.633.643.65
Date2019-03-012019-03-082019-03-15

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V9H|1|BBCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.86119
24V90|1|BBThermus thermophilus RibosomeX-RAY DIFFRACTION2.95119
34V67|1|BBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
44V67|1|DBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
54Z8C|1|2BCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.9120
65HD1|1|2BCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.7120
75HCP|1|2BCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.89120
85HCR|1|2BCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
95HCQ|1|2BCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
104WQU|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.8120
115WIT|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
126ND6|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.85120
136CAE|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
146CFJ|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
155J4C|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
165J4B|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
175W4K|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
185WIS|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
194Y4P|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
205DOY|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.6120
211VY4|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
221VY6|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
231VY7|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
244W2H|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
254W2I|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
264Z3S|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.65120
274V9R|1|DBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
281VY5|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
294W2G|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
304W2F|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
314WPO|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.8120
324WQF|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.8120
334WQY|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.8120
345HAU|1|2BCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3120
355F8K|1|2BCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
366CFL|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-RAY DIFFRACTION2.6120
376CFK|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-RAY DIFFRACTION2.7120
384Y4O|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
395FDV|1|2BCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
405FDU|1|2BCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9120
414V8G|1|DBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
424V8G|1|BBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
434V8I|1|BBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
444V8I|1|DBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
454WQF|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.8120
464WQY|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.8120
474WQU|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.8120
484WPO|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.8120
496ND6|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.85120
506CFJ|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
515J4C|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
525J4B|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
534Y4P|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
544W2F|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
555WIS|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
565W4K|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
576CAE|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
581VY4|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
591VY5|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
604W2G|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
615WIT|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
624Z3S|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.65120
635FDV|1|1BCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
645FDU|1|1BCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9121
654Y4O|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
666CFK|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-RAY DIFFRACTION2.7120
676CFL|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-RAY DIFFRACTION2.6120
685F8K|1|1BCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
691VY6|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
704V9R|1|BBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
715HCP|1|1BCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.89120
724Z8C|1|1BCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.9120
735HCQ|1|1BCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
745HCR|1|1BCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
755HD1|1|1BCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.7120
764W2H|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
775DOY|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.6120
784W2I|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
791VY7|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
805HAU|1|1BCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3120
815J8B|1|BCrystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.6120
824W2E|1|BCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9120
834LNT|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
844V8D|1|BBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
854V8B|1|BBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
864WSD|1|16Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.95122
876GSJ|1|16Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.96122
885IB7|1|16Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.99122
895E81|1|16Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.95122
905IBB|1|16Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.96122
914LNT|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
925NDK|1|16Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.95122
934V7W|1|DBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
944V7W|1|BBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
954V7X|1|DBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
964V7X|1|BBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
974V7Y|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
984V7Y|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
994V51|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1004V51|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1014V7L|1|BBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
1024V7L|1|DBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
1034V8B|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
1044V8D|1|DBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
1055NDK|1|1JCrystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.95122
1064WSD|1|1JComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.95122
1076GSJ|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.96122
1085IB7|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.99122
1095E81|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.95122
1105IBB|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.96122