#IFECompound(s)RNA source organismTitleMethodResolutionDate
15J7L|1|AA (rep)16S rRNAEscherichia coliStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32016-07-27
24YBB|1|AA16S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
34WOI|1|DA16S ribosomal RNA, Messenger RNAEscherichia coli4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32015-08-05
44WOI|1|AA16S ribosomal RNA, Messenger RNAEscherichia coli4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32015-08-05
54V9P|1|FA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
64V9O|1|BA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
75J7L|1|BA16S rRNAEscherichia coliStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32016-07-27
84V9P|1|HA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
94V9P|1|DA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
104V9P|1|BA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
114V9O|1|FA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
125J91|1|AA16S rRNAEscherichia coliStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962016-07-06
136I7V|1|AA16S ribosmal RNAEscherichia coliRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92018-12-05
144V9O|1|DA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
154U27|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82014-07-30
164YBB|1|BA16S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
174U1U|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952014-07-30
184U26|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82014-07-30
194V9D|1|AA16S rRNA, messenger RNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
206I7V|1|BA16S ribosomal RNAEscherichia coliRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92018-12-05
214U24|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92014-07-30
224U25|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92014-07-30
234V9D|1|BA16S rRNA, messenger RNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
244U27|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82014-07-30
254V9O|1|HA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
264U20|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92014-07-30
274U1U|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952014-07-30
284U1V|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32014-07-30
294U25|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92014-07-30
304U26|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82014-07-30
315J91|1|BA16S rRNAEscherichia coliStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962016-07-06
324U24|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92014-07-30
334U1V|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32014-07-30
344U20|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92014-07-30
355J5B|1|AA16S rRNAEscherichia coliStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82016-07-27
365J5B|1|BA16S rRNAEscherichia coliStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82016-07-27
377K00|1|A16S rRNAEscherichia coliStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982020-09-23
387N1P|1|1616S rRNA, mRNAElongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332021-07-14
397N2U|1|1616S rRNAElongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.532021-07-14
407N2V|1|1616S rRNA, mRNAElongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.542021-07-14
416YSS|1|a16S ribosomal RNAEscherichia coliStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.62020-08-19
426XZB|1|A116S rRNAE. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.542020-11-04
437N30|1|1616S rRNAElongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.662021-07-14
447N31|1|1616S rRNAElongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.692021-07-14
456TC3|1|16S116S rRNAEscherichia coliCryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.72020-01-01
466TBV|1|16S116S rRNAEscherichia coliCryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.72020-01-01
477N2C|1|1616S rRNA, Chains: mRElongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.722021-07-14
486XZA|1|A116S rRNAE. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.662020-11-04
496Y69|1|a16S ribosomal RNAEscherichia coliCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.862020-07-01
507NSO|1|a16S rRNA (1540-MER)Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.92021-07-14
515AFI|1|a16S ribosomal RNAEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
527B5K|1|a16S rRNAE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.92021-05-26
535NWY|1|016S rRNAEscherichia coli2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92017-07-19
546WD0|1|316S ribosomal RNA, mRNAEscherichia coliCryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY32020-07-01
556H4N|1|a16S ribosomal RNAEscherichia coliStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY32018-09-05
566WDE|1|316S ribosomal RNA, mRNAEscherichia coliCryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY32020-07-01
576ORE|1|216S ribosomal RNAEscherichia coliRelease complex 70SELECTRON MICROSCOPY2.92019-06-19
585WDT|1|a16S rRNAEscherichia coli70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32018-04-25
595WFS|1|a16S rRNAEscherichia coli70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY32018-05-02
605MDV|1|216S ribosomal RNAEscherichia coliStructure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972016-12-14
616ZTP|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY32020-09-16
626ZU1|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY32020-09-16
636ZTO|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY32020-09-23
647OE0|1|A16S rRNAE. coli pre-30S delta rbfA ribosomal subunit class FELECTRON MICROSCOPY2.692021-07-14
655IQR|1|2SSU rRNAEscherichia coliStructure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32016-05-04
667BOG|1|A16S rRNABacterial 30S ribosomal subunit assembly complex state E (body domain)ELECTRON MICROSCOPY2.752021-07-07
677BOD|1|A16S rRNA (body domain of 30S subunit)Bacterial 30S ribosomal subunit assembly complex state M (body domain)ELECTRON MICROSCOPY2.882021-07-07
687BOF|1|A16S rRNABacterial 30S ribosomal subunit assembly complex state I (body domain)ELECTRON MICROSCOPY2.922021-07-07
697BOI|1|A16S rRNABacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)ELECTRON MICROSCOPY2.982021-07-07
707OI0|1|A16S rRNAE.coli delta rbfA pre-30S ribosomal subunit class DELECTRON MICROSCOPY2.762021-07-14
717AF8|1|116SrRNA (head domain of the 30S ribosomeBacterial 30S ribosomal subunit assembly complex state E (head domain)ELECTRON MICROSCOPY2.752021-07-07
727AF3|1|116S rRNA (head)Bacterial 30S ribosomal subunit assembly complex state M (head domain)ELECTRON MICROSCOPY2.822021-07-07
737AF5|1|116SrRNA (head domain of the 30S ribosome)Bacterial 30S ribosomal subunit assembly complex state I (head domain)ELECTRON MICROSCOPY2.962021-07-07
747AFA|1|116SrRNA (head domain of the 30S ribosome)Bacterial 30S ribosomal subunit assembly complex state F (head domain)ELECTRON MICROSCOPY2.952021-07-07

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
25IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31522
36YSS|1|aStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.61529
45MDV|1|2Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.971523
56ORE|1|2Release complex 70SELECTRON MICROSCOPY2.91523
65NWY|1|02.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.91539
76WD0|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY31539
86H4N|1|aStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY31534
96Y69|1|aCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.861539
107N31|1|16Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.691522
117NSO|1|aStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.91540
126TC3|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.71523
136TBV|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.71523
147B5K|1|aE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.91522
156XZB|1|A1E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.541523
166XZA|1|A1E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.661523
175WFS|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY31529
185WDT|1|a70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY31529
195AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91528
206WDE|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY31539
217N1P|1|16Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.331531
226ZU1|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY31522
236ZTP|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY31522
246ZTO|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY31522
257K00|1|AStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.981508
264WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
274WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
287N30|1|16Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.661515
297N2U|1|16Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.531523
304V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
314V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
324V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
334U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
344U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
354U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
364U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
374U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
384U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
394U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
406I7V|1|BARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
414YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11522
425J5B|1|BAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81522
435J91|1|BAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961522
445J7L|1|BAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31522
454V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
464V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
474V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
484V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
494V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
504V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
514U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
524U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
534U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
544U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
554U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
564U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
574U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
586I7V|1|AARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91522
594YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11523
605J91|1|AAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961523
615J5B|1|AAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81523
625J7L|1|AAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31523
637BOI|1|ABacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)ELECTRON MICROSCOPY2.981070
647BOG|1|ABacterial 30S ribosomal subunit assembly complex state E (body domain)ELECTRON MICROSCOPY2.751064
657N2V|1|16Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.541524
667BOD|1|ABacterial 30S ribosomal subunit assembly complex state M (body domain)ELECTRON MICROSCOPY2.881070
677N2C|1|16Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.721524
687OI0|1|AE.coli delta rbfA pre-30S ribosomal subunit class DELECTRON MICROSCOPY2.76963
697OE0|1|AE. coli pre-30S delta rbfA ribosomal subunit class FELECTRON MICROSCOPY2.691510
707BOF|1|ABacterial 30S ribosomal subunit assembly complex state I (body domain)ELECTRON MICROSCOPY2.921065
717AF3|1|1Bacterial 30S ribosomal subunit assembly complex state M (head domain)ELECTRON MICROSCOPY2.82453
727AF8|1|1Bacterial 30S ribosomal subunit assembly complex state E (head domain)ELECTRON MICROSCOPY2.75453
737AF5|1|1Bacterial 30S ribosomal subunit assembly complex state I (head domain)ELECTRON MICROSCOPY2.96453
747AFA|1|1Bacterial 30S ribosomal subunit assembly complex state F (head domain)ELECTRON MICROSCOPY2.95453