#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14TZX|1|X (rep)Purine riboswitchVibrio vulnificus Adenine RiboswitchVibrio vulnificusBacteriaRF00167Vibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+X-ray diffraction2.012014-09-10
24XNR|1|XPurine riboswitchVibrio Vulnificus Adenine RiboswitchVibrio vulnificusBacteriaRF00167Vibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with AdenineX-ray diffraction2.212015-05-06
34TZY|1|XPurine riboswitchVibrio vulnificus Adenine RiboswitchVibrio vulnificusBacteriaRF00167Vibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+X-ray diffraction2.572014-09-10

Release history

Release2.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.982.992.1002.1012.102
Date2015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_59689.2NR_all_59689.12.22(2) 4TZX|1|X, 4TZY|1|X(1) 4XNR|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_59689.2NR_3.0_59689.32.103(3) 4TZX|1|X, 4TZY|1|X, 4XNR|1|X(0) (1) 5SWE|1|X

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14TZX|1|XVibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+X-RAY DIFFRACTION2.0171
24TZY|1|XVibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+X-RAY DIFFRACTION2.5771
34XNR|1|XVibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with AdenineX-RAY DIFFRACTION2.2171

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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