#IFECompound(s)RNA source organismTitleMethodResolutionDate
16Q1H|1|D (rep)RNA (5'-R(P*AP*AP*A)-3')Pseudomonas aeruginosaStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.452019-12-25
26Q1H|1|HRNA (5'-R(P*AP*AP*A)-3')Pseudomonas aeruginosaStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.452019-12-25
36P7P|1|FCyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.662019-12-25
46P7P|1|ECyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.662019-12-25
56P7P|1|DCyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.662019-12-25
66VM6|1|J2'-5'-Linked Cyclic RNA (5'-R(P*AP*AP*A)-3')synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.12020-06-17
76VM6|1|G2'-5'-Linked Cyclic RNA (5'-R(P*AP*AP*A)-3')synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.12020-06-17
86WAN|1|KCyclic RNA (R(P*AP*AP*A)synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.42020-06-17
96WAN|1|HCyclic RNA (R(P*AP*AP*A)synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.42020-06-17
106WAN|1|GCyclic RNA (R(P*AP*AP*A)synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.42020-06-17
116WAN|1|LCyclic RNA (R(P*AP*AP*A)synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.42020-06-17
126WAN|1|ICyclic RNA (R(P*AP*AP*A)synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.42020-06-17
136YWO|1|FRNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-RAY DIFFRACTION1.92020-08-05
146WAN|1|JCyclic RNA (R(P*AP*AP*A)synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.42020-06-17
154OAU|1|ARNA (5'-R(P*A*AP*A)-2')Complete human RNase L in complex with biological activators.X-RAY DIFFRACTION2.62014-03-12
166YWO|1|ERNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-RAY DIFFRACTION1.92020-08-05
176YWO|1|KRNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-RAY DIFFRACTION1.92020-08-05
186VM6|1|I2'-5'-Linked Cyclic RNA (5'-R(P*AP*AP*A)-3')synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.12020-06-17
196VM6|1|H2'-5'-Linked Cyclic RNA (5'-R(P*AP*AP*A)-3')synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.12020-06-17
206YWO|1|IRNA (5'-R(*AP*AP*A)-3')synthetic constructCutA in complex with A3 RNAX-RAY DIFFRACTION1.92020-08-05
212A1R|1|C5'-R(*AP*AP*A)-3'Crystal structure of PARN nuclease domainX-RAY DIFFRACTION2.62005-12-20
222A1R|1|D5'-R(*AP*AP*A)-3'Crystal structure of PARN nuclease domainX-RAY DIFFRACTION2.62005-12-20
233GPQ|1|ERNA (5'-R(*AP*AP*A)-3')Crystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22009-07-21
243GPQ|1|FRNA (5'-R(*AP*AP*A)-3')Crystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22009-07-21
256O79|1|Ccyclic RNA cA3synthetic constructCrystal structure of Csm1-Csm4 cassette in complex with cA3X-RAY DIFFRACTION32019-07-31
266VM6|1|K2'-5'-Linked Cyclic RNA (5'-R(P*AP*AP*A)-3')synthetic constructStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.12020-06-17

Release history

Release3.2353.2363.2373.2383.2393.2403.241
Date2022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-27

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16WAN|1|GStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.43
26VM6|1|IStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.13
36VM6|1|JStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.13
46VM6|1|GStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.13
56VM6|1|KStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.13
66VM6|1|HStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 2'3'3'-cAAAX-RAY DIFFRACTION2.13
76Q1H|1|HStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.453
86Q1H|1|DStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.453
96P7P|1|DStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
106P7P|1|FStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
116P7P|1|EStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
126WAN|1|LStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.43
136WAN|1|HStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.43
146WAN|1|IStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.43
156WAN|1|JStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.43
166WAN|1|KStructure of Acinetobacter baumannii Cap4 SAVED/CARF-domain containing receptor with the cyclic trinucleotide 3'3'3'-cAAAX-RAY DIFFRACTION2.43
176O79|1|CCrystal structure of Csm1-Csm4 cassette in complex with cA3X-RAY DIFFRACTION33
184OAU|1|AComplete human RNase L in complex with biological activators.X-RAY DIFFRACTION2.63
196YWO|1|KCutA in complex with A3 RNAX-RAY DIFFRACTION1.93
206YWO|1|ECutA in complex with A3 RNAX-RAY DIFFRACTION1.93
216YWO|1|ICutA in complex with A3 RNAX-RAY DIFFRACTION1.93
226YWO|1|FCutA in complex with A3 RNAX-RAY DIFFRACTION1.93
232A1R|1|CCrystal structure of PARN nuclease domainX-RAY DIFFRACTION2.63
242A1R|1|DCrystal structure of PARN nuclease domainX-RAY DIFFRACTION2.63
253GPQ|1|FCrystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22
263GPQ|1|ECrystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22