BGSU RNA Site //

Equivalence class NR_3.0_66687.5 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
17P7Q|1|a (rep)Small subunit ribosomal RNA16S rRNA, mRNAEnterococcus faecalisBacteriaRF00177E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volumeElectron microscopy2.42022-02-23
26W6P|1|aSmall subunit ribosomal RNA16S rRNAEnterococcus faecalisBacteriaRF00177MultiBody Refinement of 70S Ribosome from Enterococcus faecalisElectron microscopy2.92020-10-14
37P7T|1|aSmall subunit ribosomal RNA16S rRNA, mRNAEnterococcus faecalisBacteriaRF00177PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIIElectron microscopy2.92022-02-23
47NHK|1|aSmall subunit ribosomal RNA16S rRNA, RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*GP*AP*CP*AP*A)-3')Enterococcus faecalisBacteriaRF00177LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalisElectron microscopy2.92021-05-05
57P7S|1|aSmall subunit ribosomal RNA16S rRNA, mRNAEnterococcus faecalisBacteriaRF00177PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIElectron microscopy32022-02-23

Release history

Release3.2193.2203.2213.222
Date2022-02-232022-03-022022-03-092022-03-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_66687.5NR_3.0_66687.43.219(2) 7NHK|1|a, 6W6P|1|a(3) 7P7T|1|a, 7P7S|1|a, 7P7Q|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_66687.5NR_3.0_66687.63.223(5) 7P7T|1|a, 7P7S|1|a, 7P7Q|1|a, 7NHK|1|a, 6W6P|1|a(0) (1) 7P7R|1|a

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17NHK|1|aLsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalisELECTRON MICROSCOPY2.91517
27P7T|1|aPoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIIELECTRON MICROSCOPY2.91521
37P7Q|1|aE. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volumeELECTRON MICROSCOPY2.41519
47P7S|1|aPoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIELECTRON MICROSCOPY31521
56W6P|1|aMultiBody Refinement of 70S Ribosome from Enterococcus faecalisELECTRON MICROSCOPY2.91523
Copyright 2023 BGSU RNA group. Page generated in 0.0049 s