#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
24YBB|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
34WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
44WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
56I7V|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
65J91|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
74V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
84V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
94V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
104V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
114V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
124V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
134V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
144V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
155J7L|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
164U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
174U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
184U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
194V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
204U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
214V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
224U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
234YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
244U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
254U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
266I7V|1|CALarge subunit ribosomal RNA23S ribsomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
274U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
284U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
294U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
304U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
314U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
324U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
334U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
345J91|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
355J5B|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
365J5B|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
376HRM|1|1Small subunit ribosomal RNAstapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNAEscherichia coliBacteriaRF00177E. coli 70S d2d8 stapled ribosomeElectron microscopy2.962018-12-19
388B0X|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BBacteriaRF02541Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
398CGK|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Lincomycin and Avilamycin bound to the 50S subunitElectron microscopy1.642023-07-19
408CGV|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Tiamulin bound to the 50S subunitElectron microscopy1.662023-08-02
418CEU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Retapamulin and Capreomycin bound to the 50S subunitElectron microscopy1.832023-07-26
428FTO|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.852023-08-02
438E30|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3142Electron microscopy1.912023-06-28
448CAM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Evernimicin bound to the 50S subunitElectron microscopy1.862023-07-26
458AYE|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.962023-03-01
468E3O|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to solithromycin and VM1Electron microscopy1.992023-06-28
477K00|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
488CGD|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Clindamycin bound to the 50S subunitElectron microscopy1.982023-07-26
498E49|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC31Electron microscopy2.052023-06-28
508G6W|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.022023-04-05
517QQ3|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.Electron microscopy2.12023-01-18
528BIM|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteElectron microscopy2.042023-08-16
538E43|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3336Electron microscopy2.092023-06-28
547ZP8|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with a stalled filamin domain 5 nascent chainElectron microscopy2.22022-08-10
558BIL|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.Electron microscopy2.042023-08-16
568G6Y|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.092023-04-05
578E41|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to tiamulin and VS1Electron microscopy2.132023-06-28
588EMM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.12023-05-31
596XZ7|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.12020-07-22
608ANA|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunitElectron microscopy2.12023-03-08
618BGE|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.112023-08-16
627LVK|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cfr-modified 50S subunit from Escherichia coliElectron microscopy2.22021-12-15
637Z20|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainElectron microscopy2.292022-08-10
646PJ6|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High resolution cryo-EM structure of E.coli 50SElectron microscopy2.22020-01-22
658E35|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound SAB002Electron microscopy2.272023-06-28
668E48|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC30Electron microscopy2.272023-06-28
677N1P|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
688E33|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin analog SAB001Electron microscopy2.232023-06-28
698BHL|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.212023-08-16
707PJS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.352021-10-20
718E3M|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to L-linker solithromycin conjugateElectron microscopy2.252023-06-28
727S1H|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.352021-11-17
738E47|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC26Electron microscopy2.322023-06-28
748E45|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC17Electron microscopy2.32023-06-28
758EIU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.242023-02-01
768E42|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to tiamulin and azithromycinElectron microscopy2.292023-06-28
778E46|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC21Electron microscopy2.322023-06-28
788E32|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1Electron microscopy2.352023-06-28
798E3L|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to D-linker solithromycin conjugateElectron microscopy2.352023-06-28
807S1K|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.422022-01-19
817O1A|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.42021-09-01
828AKN|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeElectron microscopy2.32023-03-08
838BF7|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.332023-08-16
848G6X|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.312023-03-22
857S1J|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli ribosome with antibiotic radezolidElectron microscopy2.472022-03-02
867Y7G|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)Electron microscopy2.342023-10-25
877S1I|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.482022-03-02
887S1G|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
898E36|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3146Electron microscopy2.382023-06-28
908BHP|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.372023-08-16
917BL4|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.42021-05-12
927YLA|1|ILarge subunit ribosomal RNAEscherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genomeEscherichia coliBacteriaRF02541Cryo-EM structure of 50S-HflX complexElectron microscopy2.522023-01-04
937N2U|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.532021-07-14
947N2V|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.542021-07-14
957ZOD|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobiaElectron microscopy2.562022-08-10
967Y7E|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.412023-10-25
977SA4|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Damaged 70S ribosome with PrfH boundElectron microscopy2.552022-08-03
988IFB|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Dibekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.432024-02-14
997Y7F|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)Electron microscopy2.432023-10-25
1006YS3|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideElectron microscopy2.582020-09-30
1017UG7|1|23Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.582022-05-18
1026YSS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.62020-08-19
1036PCR|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40oElectron microscopy2.52020-06-17
1046PC6|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 47Electron microscopy2.52020-06-17
1056PC7|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 46Electron microscopy2.52020-06-17
1067Y7C|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)Electron microscopy2.512023-10-25
1077Y7H|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)Electron microscopy2.512023-10-25
1088E44|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC09Electron microscopy2.532023-06-28
1097NWT|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.662021-12-15
1107N30|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.662021-07-14
1116XZB|1|A2Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.542020-11-04
1127ZQ5|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with truncated uL23 and uL24 loopsElectron microscopy2.72022-08-10
1137N31|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.692021-07-14
1147O1C|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanElectron microscopy2.62021-09-01
1157ZTA|1|23S1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptideElectron microscopy2.72023-04-12
1166TBV|1|23S1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.72020-01-01
1176TC3|1|23S1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.72020-01-01
1187Y7D|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.582023-10-25
1198BH4|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.622023-08-16
1207ZQ6|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chainElectron microscopy2.752022-08-10
1216PCQ|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to VM2Electron microscopy2.62020-06-17
1227N2C|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.722021-07-14
1238EKC|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.72022-12-07
1246XZA|1|A2Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.662020-11-04
1257M5D|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)Electron microscopy2.82022-10-19
1266QDW|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideElectron microscopy2.832020-01-15
1276PC5|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compounds 46 and VS1Electron microscopy2.72020-06-17
1287NSO|1|ALarge subunit ribosomal RNA23S rRNA (2903-MER)Escherichia coliBacteriaRF02541Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.92021-07-14
1297ST2|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.92022-02-23
1307OT5|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-70 cotranslational folding intermediate 1Electron microscopy2.92022-01-19
1317OTC|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BL21(DE3)BacteriaRF02541Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BElectron microscopy2.92022-05-11
1325AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1337B5K|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.92021-05-26
1348BHJ|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.812023-08-16
1356WYV|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compounds 47 and VS1Electron microscopy2.752020-06-17
1368AM9|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeElectron microscopy2.82023-03-08
1376PCT|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 41qElectron microscopy2.82020-06-17
1386U48|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.872019-09-18
1396Y69|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.862020-07-01
1408SYL|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.92023-08-09
1416PCS|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40eElectron microscopy2.82020-06-17
1427O19|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanElectron microscopy2.92021-09-01
1437ST6|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
1447TOS|1|23SLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.92022-05-25
1458BGH|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.882023-08-16
1465NWY|1|NLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF025412.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
1476WD0|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy32020-07-01
1487OII|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-70 cotranslational folding intermediate 2Electron microscopy32022-01-19
1497OIF|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-27 cotranslational folding intermediate 2Electron microscopy32022-01-19
1506WDE|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
1518B7Y|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.Electron microscopy32023-01-25
1528BHN|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.852023-08-16
1537OIZ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of 70S ribosome stalled with TnaC peptideElectron microscopy2.92021-09-15
1547P3K|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)Electron microscopy2.92021-10-27
1558IFC|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Arbekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.92024-02-14
1566ORE|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Release complex 70SElectron microscopy2.92019-06-19
1577Q4K|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainElectron microscopy32022-11-16
1586PC8|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40qElectron microscopy2.92020-06-17
1595MDV|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
1608G2U|1|BLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900msElectron microscopy32023-12-06
1616H4N|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
1626ZU1|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32020-09-16
1636ZTO|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32020-09-23
1646ZTP|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32020-09-16
1656PCH|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 21Electron microscopy2.92020-06-17
1668AP4|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAElectron microscopy32022-11-16
1676QUL|1|ALarge subunit ribosomal RNA23S rRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF02541Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy32019-04-10
1685WFS|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1695WDT|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
1705IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1717ODE|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 50S ribosome LiCl core particleElectron microscopy2.842022-06-01
1728CGJ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Streptomycin bound to the 30S bodyElectron microscopy1.792023-07-26
1738CGU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Gentamicin bound to the 30S bodyElectron microscopy1.892023-07-26
1748CEP|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Round2 30S head (no antibiotic)Electron microscopy2.042023-07-19
1758CGR|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Apramycin bound to the 30S bodyElectron microscopy2.122023-07-26

Release history

Release3.3223.3233.324
Date2024-02-142024-02-212024-02-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14WOI|1|BA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
24V9D|1|CAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
34U1U|1|BACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
44U1V|1|BACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
54U20|1|BACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
64U27|1|BACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
74U25|1|BACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
84U26|1|BACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
94U24|1|BACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
107N30|1|23Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.662879
117N2U|1|23Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.532880
127N2V|1|23Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.542881
137ZOD|1|b70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobiaELECTRON MICROSCOPY2.562901
147N2C|1|23Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.722879
157OTC|1|ACryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BELECTRON MICROSCOPY2.92879
167UG7|1|2370S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.582879
176QUL|1|AStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY32799
187PJS|1|AStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352880
196YSS|1|AStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.62880
205IQR|1|1Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32882
214V9O|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
224V9P|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
234V9O|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
244V9P|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
254V9P|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
264V9O|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
274V9O|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
284V9P|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
297QQ3|1|ICryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.ELECTRON MICROSCOPY2.12880
307S1K|1|ICfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.422875
317S1I|1|IWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.482874
327S1G|1|Iwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482874
337S1H|1|IWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352876
347S1J|1|IWild-type Escherichia coli ribosome with antibiotic radezolidELECTRON MICROSCOPY2.472876
357N1P|1|23Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332882
367TOS|1|23SE. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.92903
377BL4|1|Ain vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42897
388G2U|1|BTime-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900msELECTRON MICROSCOPY32903
397ZQ5|1|b70S E. coli ribosome with truncated uL23 and uL24 loopsELECTRON MICROSCOPY2.72900
407ZP8|1|b70S E. coli ribosome with a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.22901
417Z20|1|b70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.292901
427ZQ6|1|b70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.752901
436QDW|1|bCryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.832888
446YS3|1|bCryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.582888
458AM9|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeELECTRON MICROSCOPY2.82732
468AKN|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeELECTRON MICROSCOPY2.32731
476ZTO|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY32876
486ZU1|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY32876
496ZTP|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY32876
508FTO|1|aE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.852743
515NWY|1|N2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92898
527SA4|1|1Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.552881
535MDV|1|1Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972881
547M5D|1|1Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)ELECTRON MICROSCOPY2.82881
557ST2|1|1Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.92903
566WD0|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY32903
576WDE|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY32903
587ST6|1|1Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY32903
596H4N|1|AStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY32900
606Y69|1|ACryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.862887
615AFI|1|A2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92876
625WFS|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY32876
635WDT|1|A70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32876
647Q4K|1|BAErythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainELECTRON MICROSCOPY32873
657B5K|1|AE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.92874
666TBV|1|23S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.72874
676TC3|1|23S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.72874
687O19|1|BACryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.92874
697O1A|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42874
707O1C|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.62874
718B0X|1|aTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.552724
727Y7D|1|aStructure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.582729
737Y7F|1|aStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)ELECTRON MICROSCOPY2.432729
747Y7E|1|aStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.412729
757Y7G|1|aStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)ELECTRON MICROSCOPY2.342729
767Y7H|1|aStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)ELECTRON MICROSCOPY2.512729
777Y7C|1|aStructure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)ELECTRON MICROSCOPY2.512729
787ZTA|1|23S1Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptideELECTRON MICROSCOPY2.72885
798IFC|1|aArbekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.92729
808IFB|1|aDibekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.432729
818EIU|1|aE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.242729
827OIZ|1|aCryo-EM structure of 70S ribosome stalled with TnaC peptideELECTRON MICROSCOPY2.92730
837P3K|1|aCryo-EM structure of 70S ribosome stalled with TnaC peptide (control)ELECTRON MICROSCOPY2.92730
847NSO|1|AStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.92903
856ORE|1|1Release complex 70SELECTRON MICROSCOPY2.92881
867NWT|1|1Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.662881
877OIF|1|1CspA-27 cotranslational folding intermediate 2ELECTRON MICROSCOPY32881
887OII|1|1CspA-70 cotranslational folding intermediate 2ELECTRON MICROSCOPY32881
897OT5|1|1CspA-70 cotranslational folding intermediate 1ELECTRON MICROSCOPY2.92881
907K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982729
918EMM|1|aComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.12729
928G6W|1|aStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.022732
938G6Y|1|aStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.092729
948G6X|1|aStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.312729
957N31|1|23Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.692882
968AYE|1|aE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.962731
978CGV|1|aTiamulin bound to the 50S subunitELECTRON MICROSCOPY1.662666
988ANA|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunitELECTRON MICROSCOPY2.12714
998CEU|1|aRetapamulin and Capreomycin bound to the 50S subunitELECTRON MICROSCOPY1.832729
1008CGD|1|aClindamycin bound to the 50S subunitELECTRON MICROSCOPY1.982724
1018SYL|1|ACryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.92821
1028CAM|1|aEvernimicin bound to the 50S subunitELECTRON MICROSCOPY1.862669
1038CGK|1|aLincomycin and Avilamycin bound to the 50S subunitELECTRON MICROSCOPY1.642678
1046XZA|1|A2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.662878
1056XZB|1|A2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.542878
1066XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12876
1075J7L|1|DAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32886
1085J91|1|DAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962886
1095J5B|1|DAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82886
1104YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
1116I7V|1|DARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92875
1128AP4|1|aStructure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAELECTRON MICROSCOPY32728
1134WOI|1|CA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
1144V9D|1|DAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
1154U1U|1|DACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
1164U20|1|DACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
1174U1V|1|DACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
1184U27|1|DACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
1194U25|1|DACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
1204U26|1|DACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
1214U24|1|DACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
1226I7V|1|CARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92898
1234YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
1245J91|1|CAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962876
1255J5B|1|CAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82876
1265J7L|1|CAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32875
1276U48|1|CAE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.872875
1287YLA|1|ICryo-EM structure of 50S-HflX complexELECTRON MICROSCOPY2.522870
1296PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22874
1307LVK|1|ICfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.22876
1318B7Y|1|ICryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.ELECTRON MICROSCOPY32880
1328E3O|1|IE. coli 50S ribosome bound to solithromycin and VM1ELECTRON MICROSCOPY1.992876
1336PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52876
1346PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52876
1356PC5|1|IE. coli 50S ribosome bound to compounds 46 and VS1ELECTRON MICROSCOPY2.72876
1366PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52876
1376PCS|1|IE. coli 50S ribosome bound to compound 40eELECTRON MICROSCOPY2.82876
1386PCQ|1|IE. coli 50S ribosome bound to VM2ELECTRON MICROSCOPY2.62876
1396PC8|1|IE. coli 50S ribosome bound to compound 40qELECTRON MICROSCOPY2.92876
1406PCT|1|IE. coli 50S ribosome bound to compound 41qELECTRON MICROSCOPY2.82876
1416PCH|1|IE. coli 50S ribosome bound to compound 21ELECTRON MICROSCOPY2.92876
1428E36|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3146ELECTRON MICROSCOPY2.382876
1438E33|1|IE. coli 50S ribosome bound to compound streptogramin analog SAB001ELECTRON MICROSCOPY2.232878
1448E43|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3336ELECTRON MICROSCOPY2.092882
1458E41|1|IE. coli 50S ribosome bound to tiamulin and VS1ELECTRON MICROSCOPY2.132877
1468E3M|1|IE. coli 50S ribosome bound to L-linker solithromycin conjugateELECTRON MICROSCOPY2.252877
1478E30|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3142ELECTRON MICROSCOPY1.912877
1488E44|1|IE. coli 50S ribosome bound to antibiotic analog SLC09ELECTRON MICROSCOPY2.532883
1498E42|1|IE. coli 50S ribosome bound to tiamulin and azithromycinELECTRON MICROSCOPY2.292877
1506WYV|1|IE. coli 50S ribosome bound to compounds 47 and VS1ELECTRON MICROSCOPY2.752876
1518E49|1|IE. coli 50S ribosome bound to antibiotic analog SLC31ELECTRON MICROSCOPY2.052883
1528E45|1|IE. coli 50S ribosome bound to antibiotic analog SLC17ELECTRON MICROSCOPY2.32878
1538E46|1|IE. coli 50S ribosome bound to antibiotic analog SLC21ELECTRON MICROSCOPY2.322876
1548E32|1|IE. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1ELECTRON MICROSCOPY2.352880
1558E3L|1|IE. coli 50S ribosome bound to D-linker solithromycin conjugateELECTRON MICROSCOPY2.352876
1568E48|1|IE. coli 50S ribosome bound to antibiotic analog SLC30ELECTRON MICROSCOPY2.272886
1578E47|1|IE. coli 50S ribosome bound to antibiotic analog SLC26ELECTRON MICROSCOPY2.322883
1588E35|1|IE. coli 50S ribosome bound to compound SAB002ELECTRON MICROSCOPY2.272880
1598BHP|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.372758
1608BIM|1|0Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteELECTRON MICROSCOPY2.042758
1618BIL|1|0Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.ELECTRON MICROSCOPY2.042758
1628BGE|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.112758
1638BHL|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.212758
1648BGH|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.882758
1658EKC|1|AEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.72821
1668BHN|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.852758
1678BF7|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.332758
1688BHJ|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.812758
1698BH4|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.622758
1707ODE|1|IE. coli 50S ribosome LiCl core particleELECTRON MICROSCOPY2.841986
1718CGU|1|aGentamicin bound to the 30S bodyELECTRON MICROSCOPY1.8928
1728CGJ|1|aStreptomycin bound to the 30S bodyELECTRON MICROSCOPY1.7928
1738CEP|1|aRound2 30S head (no antibiotic)ELECTRON MICROSCOPY2.0428
1748CGR|1|aApramycin bound to the 30S bodyELECTRON MICROSCOPY2.1227
1756HRM|1|1E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.964417