Equivalence class NR_3.0_94833.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6N6D|1|D (rep) | RNA (5'-R(P*AP*G)-3') | synthetic construct | Synthetic | Vibrio cholerae Oligoribonuclease bound to pAG | X-ray diffraction | 1.53 | 2019-06-12 | ||
| 2 | 6N6K|1|C | RNA (5'-R(P*AP*G)-3') | synthetic construct | Synthetic | Human REXO2 bound to pAG | X-ray diffraction | 1.42 | 2019-06-12 | ||
| 3 | 6N6K|1|D | RNA (5'-R(P*AP*G)-3') | synthetic construct | Synthetic | Human REXO2 bound to pAG | X-ray diffraction | 1.42 | 2019-06-12 | ||
| 4 | 3RTJ|1|D | RNA (5'-R(*AP*G)-3') | Crystal structure of ricin bound with dinucleotide ApG | X-ray diffraction | 3 | 2011-08-31 | ||||
| 5 | 1APG|1|D | RNA (5'-R(*AP*G)-3') | X-RAY ANALYSIS OF SUBSTRATE ANALOGS IN THE RICIN A-CHAIN ACTIVE SITE | X-ray diffraction | 3 | 1994-01-31 |
Release history
| Release | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 3.100 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 | 2019-11-06 | 2019-11-13 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6N6D|1|D | Vibrio cholerae Oligoribonuclease bound to pAG | X-RAY DIFFRACTION | 1.53 | 2 |
| 2 | 6N6K|1|C | Human REXO2 bound to pAG | X-RAY DIFFRACTION | 1.42 | 3 |
| 3 | 3RTJ|1|D | Crystal structure of ricin bound with dinucleotide ApG | X-RAY DIFFRACTION | 3 | 2 |
| 4 | 1APG|1|D | X-RAY ANALYSIS OF SUBSTRATE ANALOGS IN THE RICIN A-CHAIN ACTIVE SITE | X-RAY DIFFRACTION | 3 | 2 |
| 5 | 6N6K|1|D | Human REXO2 bound to pAG | X-RAY DIFFRACTION | 1.42 | 3 |