#IFECompound(s)RNA source organismTitleMethodResolutionDate
14IOA|1|Y (rep)5S ribosomal RNADeinococcus radioduransCrystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22013-03-06
24IO9|1|Y5S ribosomal RNADeinococcus radioduransCrystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22013-03-06
35JVG|1|Y5S ribosomal RNADeinococcus radioduransThe large ribosomal subunit from Deinococcus radiodurans in complex with avilamycinX-RAY DIFFRACTION3.432016-11-09
45DM6|1|Y5S ribosomal RNADeinococcus radioduransCrystal structure of the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION2.92015-11-11
53PIO|1|Y5S ribosomal RNADeinococcus radioduransCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.252011-02-23
63PIP|1|Y5S ribosomal RNADeinococcus radioduransCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.452011-02-23
75DM7|1|Y5S ribosomal RNADeinococcus radioduransCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin AX-RAY DIFFRACTION32015-11-11
83DLL|1|ZrRNA-5S ribosomal RNADeinococcus radioduransThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-RAY DIFFRACTION3.52008-09-16
91Y69|1|95S ribosomal RNADeinococcus radioduransRRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION3.332005-03-01
102ZJR|1|Yribosomal 5S RNADeinococcus radioduransRefined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION2.912008-06-17
113CF5|1|ZRRNA-5S RIBOSOMAL RNADeinococcus radioduransThiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.32008-06-17
122ZJQ|1|Yribosomal 5S RNADeinococcus radioduransInteraction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-RAY DIFFRACTION3.32008-06-17
135DM8|1|YDeinococcus radiodurans R1 chromosome 1, complete sequenceCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with orthoformimycinX-RAY DIFFRACTION3.12016-10-05
141SM1|1|95S RIBOSOMAL RNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-RAY DIFFRACTION3.422004-08-03
151NKW|1|95S ribosomal RNADeinococcus radioduransCrystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-RAY DIFFRACTION3.12003-02-11
161NWY|1|95S RIBOSOMAL RRNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-RAY DIFFRACTION3.32003-03-18
171XBP|1|95S RIBOSOMAL RNADeinococcus radioduransInhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-RAY DIFFRACTION3.52005-03-01
181NWX|1|95S RIBOSOMAL RNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-RAY DIFFRACTION3.52003-03-18

Release history

Release3.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.150
Date2017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_17405.6NR_3.5_17405.53.0(17) 5JVG|1|Y, 5DM7|1|Y, 5DM6|1|Y, 4IOA|1|Y, 4IO9|1|Y, 3PIP|1|Y, 3PIO|1|Y, 3DLL|1|Z, 3CF5|1|Z, 2ZJR|1|Y, 2ZJQ|1|Y, 1Y69|1|9, 1XBP|1|9, 1SM1|1|9, 1NWY|1|9, 1NWX|1|9, 1NKW|1|9(1) 5DM8|1|Y(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_17405.6NR_3.5_17405.73.151(17) 1SM1|1|9, 4IO9|1|Y, 1Y69|1|9, 5DM6|1|Y, 2ZJR|1|Y, 1NKW|1|9, 5JVG|1|Y, 3DLL|1|Z, 1NWY|1|9, 3PIP|1|Y, 1XBP|1|9, 4IOA|1|Y, 2ZJQ|1|Y, 5DM7|1|Y, 3CF5|1|Z, 1NWX|1|9, 3PIO|1|Y(1) 5DM8|1|Y(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13DLL|1|ZThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-RAY DIFFRACTION3.5122
24IOA|1|YCrystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.2122
34IO9|1|YCrystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.2122
42ZJQ|1|YInteraction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-RAY DIFFRACTION3.3122
53CF5|1|ZThiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.3122
62ZJR|1|YRefined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION2.91122
73PIP|1|YCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.45120
83PIO|1|YCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.25120
95JVG|1|YThe large ribosomal subunit from Deinococcus radiodurans in complex with avilamycinX-RAY DIFFRACTION3.43120
105DM8|1|YCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with orthoformimycinX-RAY DIFFRACTION3.1122
115DM6|1|YCrystal structure of the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION2.9122
125DM7|1|YCrystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin AX-RAY DIFFRACTION3122
131Y69|1|9RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION3.33118
141XBP|1|9Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-RAY DIFFRACTION3.5118
151NWX|1|9COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-RAY DIFFRACTION3.5118
161NKW|1|9Crystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-RAY DIFFRACTION3.1118
171NWY|1|9COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-RAY DIFFRACTION3.3118
181SM1|1|9COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-RAY DIFFRACTION3.42118