#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14Z4D|1|B+ 4Z4D|1|D (rep)RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*G)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3')synthetic constructHuman Argonaute2 Bound to t1-G Target RNAX-ray diffraction1.62015-09-23
24Z4E|1|B+ 4Z4E|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*U)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*U)-3')synthetic constructHuman Argonaute2 Bound to t1-U Target RNAX-ray diffraction1.82015-09-23
34W5O|1|B+ 4W5O|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3')synthetic constructThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-9X-ray diffraction1.82014-11-12
44Z4C|1|B+ 4Z4C|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*C)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*U)-3')synthetic constructHuman Argonaute2 Bound to t1-C Target RNAX-ray diffraction2.32015-09-23
54Z4H|1|B+ 4Z4H|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3')synthetic constructHuman Argonaute2 A481T Mutant Bound to t1-A Target RNAX-ray diffraction2.52015-09-23
66CBD|1|B+ 6CBD|1|CGuide RNA, Target RNAunidentifiedCrystal Structure of Human Argonaute2 Bound to Three TryptophansX-ray diffraction2.22018-04-18
74Z4I|1|B+ 4Z4I|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3')synthetic constructHuman Argonaute2 A481T Mutant Bound to t1-G Target RNAX-ray diffraction2.82015-09-23
84Z4G|1|B+ 4Z4G|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*A)-D(P*(IMP))-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3')synthetic constructHuman Argonaute2 Bound to t1-Inosine Target RNAX-ray diffraction2.72015-09-23
94W5T|1|B+ 4W5T|1|DRNA (5'-R(*AP*CP*AP*UP*GP*UP*GP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*UP*U)-3')synthetic constructThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-7X-ray diffraction2.52014-11-12
104Z4F|1|B+ 4Z4F|1|DRNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*(N6G)P*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*UP*U)-3')synthetic constructHuman Argonaute2 Bound to t1-DAP Target RNAX-ray diffraction2.82015-09-23
114W5R|1|B+ 4W5R|1|DRNA (5'-R(P*AP*AP*UP*GP*UP*GP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*UP*U)-3')synthetic constructThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)X-ray diffraction2.52014-11-12
124W5Q|1|B+ 4W5Q|1|DRNA (5'-R(*AP*AP*AP*UP*GP*UP*GP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*U)-3')synthetic constructThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8X-ray diffraction3.12014-11-12

Release history

Release3.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14Z4C|1|B+ 4Z4C|1|DHuman Argonaute2 Bound to t1-C Target RNAX-RAY DIFFRACTION2.319
24Z4E|1|B+ 4Z4E|1|DHuman Argonaute2 Bound to t1-U Target RNAX-RAY DIFFRACTION1.819
36CBD|1|B+ 6CBD|1|CCrystal Structure of Human Argonaute2 Bound to Three TryptophansX-RAY DIFFRACTION2.219
44Z4D|1|B+ 4Z4D|1|DHuman Argonaute2 Bound to t1-G Target RNAX-RAY DIFFRACTION1.620
54Z4F|1|B+ 4Z4F|1|DHuman Argonaute2 Bound to t1-DAP Target RNAX-RAY DIFFRACTION2.818
64W5Q|1|B+ 4W5Q|1|DThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8X-RAY DIFFRACTION3.118
74W5O|1|B+ 4W5O|1|DThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-9X-RAY DIFFRACTION1.820
84Z4H|1|B+ 4Z4H|1|DHuman Argonaute2 A481T Mutant Bound to t1-A Target RNAX-RAY DIFFRACTION2.520
94Z4G|1|B+ 4Z4G|1|DHuman Argonaute2 Bound to t1-Inosine Target RNAX-RAY DIFFRACTION2.720
104Z4I|1|B+ 4Z4I|1|DHuman Argonaute2 A481T Mutant Bound to t1-G Target RNAX-RAY DIFFRACTION2.820
114W5R|1|B+ 4W5R|1|DThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)X-RAY DIFFRACTION2.511
124W5T|1|B+ 4W5T|1|DThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-7X-RAY DIFFRACTION2.516

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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