NR_3.5_35542.16

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Å	Date
1	4V9R\|1\|AX (rep)	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
2	4V9S\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
3	4V9S\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-ray diffraction	3.1	2014-07-09
4	4V9R\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
5	3JCE\|1\|8	Transfer RNA	tRNA, mRNA	synthetic construct	Synthetic	RF00005	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
6	4V7M\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
7	4V63\|1\|AY	Transfer RNA	P and E-site tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
8	4V67\|1\|AY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
9	4V87\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
10	4V8F\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
11	4V9I\|1\|CV	Transfer RNA	P-SITE tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
12	4V6A\|1\|CW	Transfer RNA	tRNA-Met, RNA (5'-R(PAPAPAPUP*G)-3')	Escherichia coli	Bacteria	RF00005	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
13	4V63\|1\|CY	Transfer RNA	P and E-site tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
14	4V67\|1\|CY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
15	4V8C\|1\|DC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
16	4YZV\|1\|QV	Transfer RNA	P-site tRNA-fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-ray diffraction	3.1	2015-10-21
17	4Z3S\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
18	5DOY\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
19	4V8B\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
20	4V63\|1\|AZ	Transfer RNA	P and E-site tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
21	4V67\|1\|AZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
22	4V8E\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
23	4V8Q\|1\|BV	Transfer RNA	E-SITE or P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
24	4V8B\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
25	4V6G\|1\|CC	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
26	4V8C\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
27	4V63\|1\|CZ	Transfer RNA	P and E-site tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structural basis for translation termination on the 70S ribosome.	X-ray diffraction	3.21	2014-07-09
28	4V67\|1\|CZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
29	4V8E\|1\|DC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-ray diffraction	3.3	2014-07-09
30	4LT8\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL Pro	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
31	4W4G\|1\|XV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
32	4LT8\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL Pro	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.14	2014-08-06
33	4LNT\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
34	4YZV\|1\|XV	Transfer RNA	P-site tRNA-fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-ray diffraction	3.1	2015-10-21
35	4Y4P\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
36	4WRO\|1\|2K	Transfer RNA	tRNA-fMet, RNA (30-MER)	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
37	4Z8C\|1\|2x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
38	4Y4P\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
39	3CW5\|1\|A	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	E. coli Initiator tRNA	X-ray diffraction	3.1	2008-09-02
40	4W2G\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
41	4W2F\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
42	4W2H\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
43	4W2I\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
44	1VY5\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
45	4W2I\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
46	1VY5\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
47	4W2F\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
48	4W2G\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
49	4V5C\|1\|AV	Transfer RNA	P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
50	5DOY\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
51	4Z3S\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
52	1VY6\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
53	1VY7\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
54	1VY4\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
55	1VY6\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
56	4WPO\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
57	4V8D\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
58	4V9I\|1\|AV	Transfer RNA	P-SITE tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-ray diffraction	3.3	2014-07-09
59	4V6A\|1\|AW	Transfer RNA	tRNA-Met, RNA (5'-R(PAPAPAPUP*G)-3')	Escherichia coli	Bacteria	RF00005	Structure of EF-P bound to the 70S ribosome.	X-ray diffraction	3.1	2014-07-09
60	4V87\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
61	4V7M\|1\|CX	Transfer RNA	RNA (77-MER), RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of Capreomycin bound to the 70S ribosome.	X-ray diffraction	3.45	2014-07-09
62	4LNT\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
63	4YPB\|1\|QV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
64	4YPB\|1\|XV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
65	4Z8C\|1\|1x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
66	4ZER\|1\|1x	Transfer RNA	tRNA met, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3.1	2015-05-20
67	4WQR\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	2015-06-10
68	4WSD\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
69	5EL6\|1\|2K	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-ray diffraction	3.1	2016-01-27
70	5EL4\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-ray diffraction	3.15	2016-01-27
71	5EL7\|1\|2K	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-ray diffraction	3.15	2016-01-27
72	4WT1\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
73	4ZER\|1\|2x	Transfer RNA	tRNA met, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3.1	2015-05-20
74	3CW6\|1\|A	Transfer RNA	Initiator tRNA	Escherichia coli	Bacteria	RF00005	E. coli Initiator tRNA	X-ray diffraction	3.3	2008-09-02
75	4WQY\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
76	4V8D\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
77	1VVJ\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
78	4W4G\|1\|QV	Transfer RNA	tRNA fMet, messenger RNA	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
79	4LSK\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
80	1VVJ\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-ray diffraction	3.44	2014-08-06
81	4LSK\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-ray diffraction	3.48	2014-08-06
82	4WR6\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-ray diffraction	3.05	2015-06-10
83	4WPO\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
84	4V6G\|1\|CB	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
85	5F8K\|1\|1x	Transfer RNA	tRNAiMet, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
86	5EL5\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-ray diffraction	3.15	2016-01-27
87	4WQ1\|1\|2K	Transfer RNA	tRNA-fMET, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.1	2015-06-10
88	5E7K\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-ray diffraction	3.2	2016-01-27
89	4WQ1\|1\|2L	Transfer RNA	tRNA-fMET, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.1	2015-06-10
90	4WSD\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
91	5EL6\|1\|2L	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-ray diffraction	3.1	2016-01-27
92	5F8K\|1\|2x	Transfer RNA	tRNAiMet, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
93	4W2H\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
94	4WQY\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
95	4V51\|1\|AV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
96	4V51\|1\|CV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
97	4WRA\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-ray diffraction	3.05	2015-06-10
98	4WZO\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	2015-06-10
99	4V6G\|1\|AC	Transfer RNA	TRNA FMET (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
100	4V5K\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE, MRNA	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
101	4V7L\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
102	1VY7\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
103	1VY4\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
104	4WZO\|1\|1K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	2015-06-10
105	4WZO\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-fMet and mRNA	X-ray diffraction	3.3	2015-06-10
106	5E7K\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-ray diffraction	3.2	2016-01-27
107	2FMT\|1\|C	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
108	2FMT\|1\|D	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
109	4V5C\|1\|CV	Transfer RNA	P-SITE TRNA FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-ray diffraction	3.3	2014-07-09
110	4WRA\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-ray diffraction	3.05	2015-06-10
111	5AFI\|1\|v	Transfer RNA	P-site fMet-tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
112	4V8F\|1\|BC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
113	4V6G\|1\|CD	Transfer RNA	TRNA FMET (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
114	5EL4\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-ray diffraction	3.15	2016-01-27
115	4WRO\|1\|2L	Transfer RNA	tRNA-fMet, RNA (30-MER)	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
116	4V5K\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
117	5EL5\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-ray diffraction	3.15	2016-01-27
118	4WT1\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-ray diffraction	3.05	2015-06-10
119	4WQR\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-ray diffraction	3.15	2015-06-10
120	5EL7\|1\|2L	Transfer RNA	E. coli tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-ray diffraction	3.15	2016-01-27
121	4YPB\|1\|QW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
122	4W4G\|1\|QW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
123	4W4G\|1\|XW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-ray diffraction	3.3	2015-10-21
124	4YPB\|1\|XW	Transfer RNA	tRNA fMet	Escherichia coli	Bacteria	RF00005	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-ray diffraction	3.4	2015-10-21
125	4WR6\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-ray diffraction	3.05	2015-06-10
126	4V6G\|1\|AD	Transfer RNA	TRNA FMET (UNMODIFIED BASES)	Escherichia coli	Bacteria	RF00005	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-ray diffraction	3.5	2014-07-09
127	4V7L\|1\|CX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
128	4V8Q\|1\|BW	Transfer RNA	E-SITE or P-SITE TRNA FMET	Escherichia coli	Bacteria	RF00005	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-ray diffraction	3.1	2014-07-09
129	4V8C\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
130	4V8B\|1\|AD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
131	4V87\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
132	4V8C\|1\|DD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-ray diffraction	3.3	2014-07-09
133	4V87\|1\|BD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding.	X-ray diffraction	3.1	2014-07-09
134	4V8B\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
135	5AFI\|1\|w	Transfer RNA	P-site fMet-tRNAfMet	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
136	3QSY\|1\|D	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea	X-ray diffraction	3.2	2012-03-21
137	4V5K\|1\|AW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09
138	4V5K\|1\|CW	Transfer RNA	E-SITE TRNA PHE OR P-SITE TRNA PHE	Escherichia coli	Bacteria	RF00005	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-ray diffraction	3.2	2014-07-09

Release history

Release	2.66	2.67	2.68	2.69
Date	2016-03-11	2016-03-18	2016-03-25	2016-04-01

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_35542.16	NR_all_35542.15	2.66	(138) 4V8Q\|1\|BV, 4WR6\|1\|2K, 4V5C\|1\|CV, 4V87\|1\|CD, 4W2H\|1\|CX, 5EL4\|1\|2K, 2FMT\|1\|C, 4V6A\|1\|AW, 4V8F\|1\|CC, 4YZV\|1\|QV, 4V51\|1\|CV, 4WRO\|1\|2K, 5E7K\|1\|2L, 1VY7\|1\|CX, 4W4G\|1\|XV, 4YPB\|1\|XV, 4V6G\|1\|CB, 4V9I\|1\|CV, 4WRA\|1\|2L, 4V5K\|1\|CV, 4V8B\|1\|CC, 4W4G\|1\|QV, 3CW6\|1\|A, 4V6G\|1\|AD, 4V9I\|1\|AV, 4Z3S\|1\|2x, 4V5K\|1\|AV, 4V8B\|1\|AD, 4WSD\|1\|2L, 5EL5\|1\|2K, 3CW5\|1\|A, 4WPO\|1\|DX, 4YZV\|1\|XV, 4V7L\|1\|AX, 4V9S\|1\|AX, 4WSD\|1\|2K, 4V63\|1\|AZ, 5EL4\|1\|2L, 4V8C\|1\|CD, 4W4G\|1\|XW, 4LNT\|1\|QV, 4V6G\|1\|CD, 4V9R\|1\|CX, 4ZER\|1\|1x, 4V5K\|1\|CW, 4V8C\|1\|CC, 4WZO\|1\|1K, 5EL6\|1\|2L, 1VVJ\|1\|XV, 3QSY\|1\|D, 4WQR\|1\|2K, 4Z8C\|1\|1x, 4W2F\|1\|CX, 4WT1\|1\|2L, 4V67\|1\|AY, 5EL6\|1\|2K, 1VVJ\|1\|QV, 4V8D\|1\|AC, 4WQ1\|1\|2K, 4LSK\|1\|XV, 4V7M\|1\|AX, 4W2F\|1\|AX, 4V63\|1\|CY, 4V8C\|1\|DD, 4Y4P\|1\|1x, 5F8K\|1\|1x, 1VY5\|1\|AX, 4LSK\|1\|QV, 4WQY\|1\|DX, 4ZER\|1\|2x, 4W2H\|1\|AX, 4WZO\|1\|2L, 4V67\|1\|CZ, 5EL7\|1\|2L, 1VY4\|1\|CX, 4V8E\|1\|DC, 4WQR\|1\|2L, 4V51\|1\|AV, 4V87\|1\|BD, 4W2G\|1\|CX, 1VY6\|1\|CX, 4V67\|1\|AZ, 4V8E\|1\|BC, 4YPB\|1\|QW, 4LT8\|1\|XV, 4V7M\|1\|CX, 4WRA\|1\|2K, 5DOY\|1\|1x, 1VY6\|1\|AX, 4W2I\|1\|CX, 4YPB\|1\|QV, 5AFI\|1\|w, 4V8B\|1\|AC, 4W2I\|1	(0)	(67) 4V5F\|1\|AW, 4LFZ\|1\|XV, 3JBN\|1\|7, 4V8J\|1\|AV, 4V6V\|1\|A3, 4V69\|1\|AV, 4P70\|1\|QV, 3J5S\|1\|E, 4V70\|1\|A3, 4V4Z\|1\|AC, 3J78\|1\|PT, 4V7P\|1\|AW, 4V73\|1\|A3, 4V5F\|1\|CV, 4P6F\|1\|QV, 3JBO\|1\|7, 4V8J\|1\|CV, 4V6Y\|1\|A3, 4V6N\|1\|BD, 4P70\|1\|XV, 3J77\|1\|PT, 4V71\|1\|A3, 4V5F\|1\|AV, 3J9Y\|1\|v, 4V7P\|1\|DW, 4V74\|1\|A3, 4V5F\|1\|CW, 4P6F\|1\|XV, 3V11\|1\|D, 3DEG\|1\|B, 4V8O\|1\|AV, 4V6Z\|1\|A3, 4V6O\|1\|AD, 4TUA\|1\|QV, 3J78\|1\|ET, 4V72\|1\|A3, 5D8B\|1\|BD, 4L71\|1\|QV, 4V97\|1\|AV, 4V6P\|1\|AD, 4TUA\|1\|XV, 5D8B\|1\|ED, 4L71\|1\|XV, 4V97\|1\|CV, 4V6Q\|1\|AD, 4TUB\|1\|QV, 5D8B\|1\|FD, 4V6R\|1\|AD, 4TUB\|1\|XV, 5D8B\|1\|XC, 4V75\|1\|A3, 4V6S\|1\|BC, 4TUC\|1\|QV, 1EG0\|1\|O, 4V76\|1\|A3, 4TUC\|1\|XV, 4V77\|1\|A3, 4LEL\|1\|QV, 4V4X\|1\|AC, 4TUD\|1\|QV, 4V78\|1\|A3, 4LEL\|1\|XV, 4TUD\|1\|XV, 4V79\|1\|A3, 4LFZ\|1\|QV, 4V6T\|1\|AX, 4V7B\|1\|AV

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	5AFI\|1\|w	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	73
2	5EL6\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-RAY DIFFRACTION	3.1	72
3	5E7K\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-RAY DIFFRACTION	3.2	72
4	4WZO\|1\|2L	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	73
5	4WSD\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	72
6	5E7K\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site	X-RAY DIFFRACTION	3.2	72
7	5EL6\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin	X-RAY DIFFRACTION	3.1	72
8	5EL4\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-RAY DIFFRACTION	3.15	71
9	5EL5\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-RAY DIFFRACTION	3.15	72
10	5EL7\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-RAY DIFFRACTION	3.15	72
11	4WRO\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
12	4WT1\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
13	4V8F\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
14	4V8E\|1\|DC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	77
15	4V8E\|1\|BC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3.3	77
16	4WRA\|1\|2L	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	3.05	73
17	4WQR\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	72
18	4WR6\|1\|2L	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.05	72
19	4WQ1\|1\|2L	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.1	72
20	4V8D\|1\|CC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
21	5EL7\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin	X-RAY DIFFRACTION	3.15	72
22	4WZO\|1\|2K	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	72
23	4WSD\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	72
24	4WR6\|1\|2K	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.05	71
25	5EL5\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position	X-RAY DIFFRACTION	3.15	72
26	4WRA\|1\|2K	Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	3.05	73
27	4WT1\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
28	4WQR\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.15	72
29	4WRO\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site	X-RAY DIFFRACTION	3.05	72
30	4WQ1\|1\|2K	Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.	X-RAY DIFFRACTION	3.1	72
31	4V8D\|1\|AC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
32	4V8F\|1\|BC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
33	5EL4\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position	X-RAY DIFFRACTION	3.15	72
34	4V8B\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
35	4V87\|1\|CC	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
36	4V8C\|1\|DC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
37	4V87\|1\|BC	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
38	4V8C\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
39	4V8B\|1\|AC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
40	4V6G\|1\|CC	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
41	4ZER\|1\|1x	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3.1	72
42	5F8K\|1\|1x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
43	4WQY\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
44	4WPO\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
45	1VY4\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
46	1VY5\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
47	4W2G\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
48	1VY7\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
49	1VY6\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
50	4W2F\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
51	4Y4P\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
52	4W2H\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
53	4V9R\|1\|AX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
54	4V9S\|1\|AX	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	76
55	4Z3S\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	71
56	4W2I\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
57	5DOY\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	71
58	4Z8C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	72
59	4Z8C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	72
60	5AFI\|1\|v	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	73
61	4V5K\|1\|AV	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
62	4ZER\|1\|2x	Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3.1	72
63	5F8K\|1\|2x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
64	4V6G\|1\|AC	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
65	3JCE\|1\|8	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	77
66	4V63\|1\|CY	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
67	4V63\|1\|AY	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
68	4V8Q\|1\|BV	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	77
69	4YPB\|1\|QV	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
70	4YZV\|1\|QV	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-RAY DIFFRACTION	3.1	77
71	4W4G\|1\|QV	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
72	4YZV\|1\|XV	Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon	X-RAY DIFFRACTION	3.1	77
73	4YPB\|1\|XV	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
74	4W4G\|1\|XV	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
75	4V67\|1\|CY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
76	4V67\|1\|AY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
77	4LNT\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
78	4LT8\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	77
79	1VVJ\|1\|XV	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	77
80	4LSK\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	77
81	4LSK\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome	X-RAY DIFFRACTION	3.48	77
82	1VVJ\|1\|QV	Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.44	77
83	4LT8\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome	X-RAY DIFFRACTION	3.14	77
84	4LNT\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
85	4V6A\|1\|CW	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	77
86	4V6A\|1\|AW	Structure of EF-P bound to the 70S ribosome.	X-RAY DIFFRACTION	3.1	77
87	4V7M\|1\|AX	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	77
88	4V7M\|1\|CX	The structures of Capreomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3.45	77
89	4V5C\|1\|AV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
90	4V7L\|1\|AX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
91	4V9I\|1\|AV	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	77
92	4V51\|1\|CV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
93	4V51\|1\|AV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
94	4V9I\|1\|CV	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon	X-RAY DIFFRACTION	3.3	77
95	4V7L\|1\|CX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
96	4W2I\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
97	5DOY\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	71
98	4W2H\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
99	4V9S\|1\|CX	Crystal structure of antibiotic GE82832 bound to 70S ribosome	X-RAY DIFFRACTION	3.1	76
100	4V9R\|1\|CX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
101	4Z3S\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	71
102	4WQY\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
103	4WPO\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
104	1VY4\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
105	1VY5\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
106	4W2G\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
107	4W2F\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
108	4Y4P\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
109	1VY6\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
110	1VY7\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
111	4V5K\|1\|CV	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
112	4V5C\|1\|CV	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.	X-RAY DIFFRACTION	3.3	76
113	4WZO\|1\|1K	Complex of 70S ribosome with tRNA-fMet and mRNA	X-RAY DIFFRACTION	3.3	68
114	4V6G\|1\|CB	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	65
115	4W4G\|1\|QW	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
116	4YPB\|1\|QW	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
117	4W4G\|1\|XW	Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon	X-RAY DIFFRACTION	3.3	77
118	4YPB\|1\|XW	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon	X-RAY DIFFRACTION	3.4	77
119	4V6G\|1\|CD	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
120	4V67\|1\|CZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
121	4V67\|1\|AZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
122	4V63\|1\|AZ	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
123	4V63\|1\|CZ	Structural basis for translation termination on the 70S ribosome.	X-RAY DIFFRACTION	3.21	77
124	4V8Q\|1\|BW	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	X-RAY DIFFRACTION	3.1	77
125	4V6G\|1\|AD	Initiation complex of 70S ribosome with two tRNAs and mRNA.	X-RAY DIFFRACTION	3.5	77
126	4V87\|1\|CD	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
127	4V8B\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
128	4V8C\|1\|DD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
129	4V8C\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).	X-RAY DIFFRACTION	3.3	77
130	4V8B\|1\|AD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
131	4V87\|1\|BD	Crystal structure analysis of ribosomal decoding.	X-RAY DIFFRACTION	3.1	77
132	4V5K\|1\|AW	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
133	4V5K\|1\|CW	Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome	X-RAY DIFFRACTION	3.2	77
134	3CW6\|1\|A	E. coli Initiator tRNA	X-RAY DIFFRACTION	3.3	72
135	3CW5\|1\|A	E. coli Initiator tRNA	X-RAY DIFFRACTION	3.1	72
136	2FMT\|1\|D	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
137	2FMT\|1\|C	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
138	3QSY\|1\|D	Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea	X-RAY DIFFRACTION	3.2	77

Equivalence class NR_3.5_35542.16 Obsolete

Release history

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