BGSU RNA Site //

Equivalence class NR_3.5_41610.8 Obsolete

#IFECompound(s)RNA source organismTitleMethodResolutionDate
16TPQ|1|U (rep)pre-23S rRNABacillus subtilisRNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072020-09-30
27AQD|1|A23S ribosomal RNAStructure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12020-11-25
37AQC|1|A23S ribosomal RNAStructure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992020-11-25
46TNN|1|Upre-23S rRNABacillus subtilisMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072020-09-30
56HA1|1|A23S ribosomal RNABacillus subtilisCryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12018-08-29
66HA8|1|A23S rRNABacillus subtilisCryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52018-08-29
76PPF|1|A23S rRNABacillus subtilisBacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42019-09-18
86PVK|1|A23S rRNABacillus subtilisBacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42019-09-18

Release history

Release3.1543.155
Date2020-11-252020-12-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_41610.8NR_3.5_41610.73.154(6) 6TNN|1|U, 6PVK|1|A, 6PPF|1|A, 6HA8|1|A, 6HA1|1|A, 6TPQ|1|U(2) 7AQC|1|A, 7AQD|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_41610.8NR_3.5_41610.93.156(8) 6HA8|1|A, 6HA1|1|A, 7AQD|1|A, 7AQC|1|A, 6TPQ|1|U, 6TNN|1|U, 6PVK|1|A, 6PPF|1|A(0) (1) 7AS8|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16TPQ|1|URNase M5 bound to 50S ribosome with precursor 5S rRNAELECTRON MICROSCOPY3.072924
26TNN|1|UMini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNAELECTRON MICROSCOPY3.072930
36PPF|1|ABacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42471
46PVK|1|ABacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42169
57AQD|1|AStructure of the bacterial RQC complex (Translocating State)ELECTRON MICROSCOPY3.12918
67AQC|1|AStructure of the bacterial RQC complex (Decoding State)ELECTRON MICROSCOPY2.992820
76HA1|1|ACryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12887
86HA8|1|ACryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52887