#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14LJ0|1|C (rep)polyadenosine RNANab2 Zn fingers complexed with polyadenosineX-ray diffraction2.152013-10-09
24LJ0|1|Dpolyadenosine RNANab2 Zn fingers complexed with polyadenosineX-ray diffraction2.152013-10-09
34LJ0|1|Epolyadenosine RNANab2 Zn fingers complexed with polyadenosineX-ray diffraction2.152013-10-09
47M50|1|TT+ 7M50|1|kkRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite tobacco mosaic virusCrystallographic structure of a cubic crystal form of STMV grown from ammonium sulfateX-ray diffraction2.312021-12-15
55BKN|1|PRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chlorideX-ray diffraction32021-12-15
65BKN|1|S+ 5BKN|1|hRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*U)-3')Satellite tobacco mosaic virusCrystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chlorideX-ray diffraction32021-12-15
75BKN|1|aRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3')Satellite tobacco mosaic virusCrystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chlorideX-ray diffraction32021-12-15
88CX0|1|KRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*A)-3')Spodoptera frugiperdaCryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC monomeric complexElectron microscopy2.72023-02-15
97OGK|1|D3'ETS(LeuZ)Escherichia coliA cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)Electron microscopy3.42021-07-07

Release history

Release3.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.330
Date2023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_41668.2NR_3.5_41668.13.270(8) 7OGK|1|D, 7M50|1|TT+7M50|1|kk, 5BKN|1|a, 5BKN|1|S+5BKN|1|h, 5BKN|1|P, 4LJ0|1|E, 4LJ0|1|D, 4LJ0|1|C(1) 8CX0|1|K(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17M50|1|TT+7M50|1|kkCrystallographic structure of a cubic crystal form of STMV grown from ammonium sulfateX-RAY DIFFRACTION2.317
27OGK|1|DA cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)ELECTRON MICROSCOPY3.48
34LJ0|1|DNab2 Zn fingers complexed with polyadenosineX-RAY DIFFRACTION2.154
44LJ0|1|CNab2 Zn fingers complexed with polyadenosineX-RAY DIFFRACTION2.154
54LJ0|1|ENab2 Zn fingers complexed with polyadenosineX-RAY DIFFRACTION2.152
68CX0|1|KCryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC monomeric complexELECTRON MICROSCOPY2.78
75BKN|1|S+5BKN|1|hCrystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chlorideX-RAY DIFFRACTION36
85BKN|1|PCrystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chlorideX-RAY DIFFRACTION37
95BKN|1|aCrystallographic structure of a cubic crystal form of STMV (84.5 degree rotation) grown from chlorideX-RAY DIFFRACTION34
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