Equivalence class NR_3.5_52752.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6QZP|1|L7 (rep) | 5S ribosomal RNA | 5S rRNA (120-MER) | Homo sapiens | Eukarya | RF00001 | High-resolution cryo-EM structure of the human 80S ribosome | Electron microscopy | 2.9 | 2019-04-24 |
| 2 | 6EK0|1|L7 | 5S ribosomal RNA | Homo sapiens | Eukarya | High-resolution cryo-EM structure of the human 80S ribosome | Electron microscopy | 2.9 | 2018-01-24 | ||
| 3 | 6OLE|1|E | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | Electron microscopy | 3.1 | 2019-06-19 |
| 4 | 6Y2L|1|L7 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Structure of human ribosome in POST state | Electron microscopy | 3 | 2020-04-15 |
| 5 | 6OM0|1|E | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs | Electron microscopy | 3.1 | 2019-06-19 |
| 6 | 6Y0G|1|L7 | 5S ribosomal RNA | 5S rRNA | Homo sapiens | Eukarya | RF00001 | Structure of human ribosome in classical-PRE state | Electron microscopy | 3.2 | 2020-04-15 |
| 7 | 6OLG|1|A4 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA) | Electron microscopy | 3.4 | 2019-06-19 |
| 8 | 6OLI|1|E | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC) | Electron microscopy | 3.5 | 2019-06-19 |
| 9 | 6Y57|1|L7 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Structure of human ribosome in hybrid-PRE state | Electron microscopy | 3.5 | 2020-04-15 |
| 10 | 5AJ0|1|A4 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6QZP|1|L7 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 120 |
| 2 | 6EK0|1|L7 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 120 |
| 3 | 6Y0G|1|L7 | Structure of human ribosome in classical-PRE state | ELECTRON MICROSCOPY | 3.2 | 120 |
| 4 | 6Y2L|1|L7 | Structure of human ribosome in POST state | ELECTRON MICROSCOPY | 3 | 120 |
| 5 | 6Y57|1|L7 | Structure of human ribosome in hybrid-PRE state | ELECTRON MICROSCOPY | 3.5 | 120 |
| 6 | 6OLI|1|E | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC) | ELECTRON MICROSCOPY | 3.5 | 119 |
| 7 | 6OLE|1|E | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | ELECTRON MICROSCOPY | 3.1 | 119 |
| 8 | 6OM0|1|E | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs | ELECTRON MICROSCOPY | 3.1 | 119 |
| 9 | 6OLG|1|A4 | Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA) | ELECTRON MICROSCOPY | 3.4 | 119 |
| 10 | 5AJ0|1|A4 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 119 |